Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:37:51 (1640699): wrapper (7.7.26015): starting
20:37:51 (1640699): wrapper: running run_atlas (--nthreads 6)
[2025-11-25 20:37:51] Arguments: --nthreads 6
[2025-11-25 20:37:51] Threads: 6
[2025-11-25 20:37:51] Checking for CVMFS
[2025-11-25 20:37:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:37:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:37:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:37:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:37:51] 2.13.3.0 1581104 476 54360 153295 0 81 21653794 81920001 0 130560 0 205839 99.976 21258 3752 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://147.213.204.101:3128 1
[2025-11-25 20:37:51] CVMFS is ok
[2025-11-25 20:37:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:37:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:37:51] Further information can be found at the LHC@home message board.
[2025-11-25 20:37:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:37:51] Checking for apptainer binary...
[2025-11-25 20:37:51] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-11-25 20:37:51] apptainer is not installed, using version from CVMFS
[2025-11-25 20:37:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:37:52] monitor-atlas.iep
[2025-11-25 20:37:52] apptainer works
[2025-11-25 20:37:52] Set ATHENA_PROC_NUMBER=6
[2025-11-25 20:37:52] Set ATHENA_CORE_NUMBER=6
[2025-11-25 20:37:52] Starting ATLAS job with PandaID=6895559665
[2025-11-25 20:37:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:42:43]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:42:43] 2025-11-26 01:41:41,275 | INFO     | time since job start (21820s) is within the limit (172800.0s)
[2025-11-26 02:42:43] 2025-11-26 01:41:42,196 | INFO     | monitor loop #1655: job 0:6895559665 is in state 'finished'
[2025-11-26 02:42:43] 2025-11-26 01:41:42,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:42:43] 2025-11-26 01:41:42,459 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 02:42:43] 2025-11-26 01:41:42,460 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 4331.848333333332
[2025-11-26 02:42:43] 2025-11-26 01:41:42,460 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6895559665/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:42:43] 2025-11-26 01:41:42,461 | INFO     | extracted standard info from prmon json
[2025-11-26 02:42:43] 2025-11-26 01:41:42,461 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:42:43] 2025-11-26 01:41:42,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:42:43] 2025-11-26 01:41:42,463 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:42:43] 2025-11-26 01:41:42,463 | INFO     | sum of square deviations: 14227353269.5
[2025-11-26 02:42:43] 2025-11-26 01:41:42,464 | INFO     | sum of deviations: 154076940524.0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,464 | INFO     | mean x: 1764110390.5
[2025-11-26 02:42:43] 2025-11-26 01:41:42,464 | INFO     | mean y: 2715354.324022346
[2025-11-26 02:42:43] 2025-11-26 01:41:42,464 | INFO     | intersect: -19101943577.39246
[2025-11-26 02:42:43] 2025-11-26 01:41:42,465 | INFO     | chi2: 2.9087643104586878
[2025-11-26 02:42:43] 2025-11-26 01:41:42,465 | INFO     | sum of square deviations: 13639518992.0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,466 | INFO     | sum of deviations: 212851566523.00003
[2025-11-26 02:42:43] 2025-11-26 01:41:42,466 | INFO     | mean x: 1764110238.0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,466 | INFO     | mean y: 2730495.4390934845
[2025-11-26 02:42:43] 2025-11-26 01:41:42,466 | INFO     | intersect: -27527098664.797497
[2025-11-26 02:42:43] 2025-11-26 01:41:42,466 | INFO     | chi2: 1.4220404372218096
[2025-11-26 02:42:43] 2025-11-26 01:41:42,466 | INFO     | current chi2=1.4220404372218096 (change=51.1118713843967 %)
[2025-11-26 02:42:43] 2025-11-26 01:41:42,466 | INFO     | sum of square deviations: 13068103627.0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,468 | INFO     | sum of deviations: 206239900658.0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,468 | INFO     | mean x: 1764110085.5
[2025-11-26 02:42:43] 2025-11-26 01:41:42,468 | INFO     | mean y: 2728730.7816091953
[2025-11-26 02:42:43] 2025-11-26 01:41:42,468 | INFO     | intersect: -27838333688.67971
[2025-11-26 02:42:43] 2025-11-26 01:41:42,468 | INFO     | chi2: 1.4219461902153208
[2025-11-26 02:42:43] 2025-11-26 01:41:42,468 | INFO     | current chi2=1.4219461902153208 (change=0.006627589766222387 %)
[2025-11-26 02:42:43] 2025-11-26 01:41:42,468 | INFO     | right removable region: 347
[2025-11-26 02:42:43] 2025-11-26 01:41:42,468 | INFO     | sum of square deviations: 13639518992.0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,469 | INFO     | sum of deviations: 96514938649.00012
[2025-11-26 02:42:43] 2025-11-26 01:41:42,469 | INFO     | mean x: 1764110543.0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,469 | INFO     | mean y: 2730188.552407932
[2025-11-26 02:42:43] 2025-11-26 01:41:42,469 | INFO     | intersect: -12480336181.131435
[2025-11-26 02:42:43] 2025-11-26 01:41:42,470 | INFO     | chi2: 1.560040576239445
[2025-11-26 02:42:43] 2025-11-26 01:41:42,470 | INFO     | current chi2=1.560040576239445 (change=46.36758397267878 %)
[2025-11-26 02:42:43] 2025-11-26 01:41:42,470 | INFO     | sum of square deviations: 13068103627.0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,471 | INFO     | sum of deviations: 89095517554.99998
[2025-11-26 02:42:43] 2025-11-26 01:41:42,471 | INFO     | mean x: 1764110695.5
[2025-11-26 02:42:43] 2025-11-26 01:41:42,471 | INFO     | mean y: 2732166.143678161
[2025-11-26 02:42:43] 2025-11-26 01:41:42,471 | INFO     | intersect: -12024594822.230185
[2025-11-26 02:42:43] 2025-11-26 01:41:42,471 | INFO     | chi2: 1.5586981207072659
[2025-11-26 02:42:43] 2025-11-26 01:41:42,471 | INFO     | current chi2=1.5586981207072659 (change=0.08605260354285776 %)
[2025-11-26 02:42:43] 2025-11-26 01:41:42,471 | INFO     | left removable region: 20
[2025-11-26 02:42:43] 2025-11-26 01:41:42,471 | INFO     | sum of square deviations: 10842205148.0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,472 | INFO     | sum of deviations: 131182380202.99998
[2025-11-26 02:42:43] 2025-11-26 01:41:42,472 | INFO     | mean x: 1764110665.0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,472 | INFO     | mean y: 2749036.859327217
[2025-11-26 02:42:43] 2025-11-26 01:41:42,472 | INFO     | intersect: -21341639195.72138
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | chi2: 0.052988660191435055
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | current memory leak: 12.10 B/s (using 327 data points, chi2=0.05)
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | could have reported an average CPU frequency of 4305 MHz (16 samples)
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | ..............................
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | . Timing measurements:
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | . get job = 0 s
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | . initial setup = 1 s
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | . payload setup = 4 s
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | . stage-in = 0 s
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | . payload execution = 21789 s
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | . stage-out = 1 s
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | . log creation = 0 s
[2025-11-26 02:42:43] 2025-11-26 01:41:42,473 | INFO     | ..............................
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | 
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | job summary report
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | --------------------------------------------------
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | PanDA job id: 6895559665
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | task id: 47556149
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | errors: (none)
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | pilot state: finished 
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | transexitcode: 0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | exeerrorcode: 0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | exeerrordiag: 
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | exitcode: 0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | exitmsg: OK
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | cpuconsumptiontime: 100231 s
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | nevents: 1000
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | neventsw: 0
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | pid: 1650976
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | pgrp: 1650976
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | corecount: 6
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | event service: False
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | sizes: {0: 2284315, 4: 2284577, 11: 2284605, 21798: 2320118, 21799: 2329112, 21800: 2329168, 21807: 2329542}
[2025-11-26 02:42:43] 2025-11-26 01:41:42,503 | INFO     | --------------------------------------------------
[2025-11-26 02:42:43] 2025-11-26 01:41:42,504 | INFO     | 
[2025-11-26 02:42:43] 2025-11-26 01:41:42,504 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-26 02:42:43] 2025-11-26 01:41:42,512 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | job 6895559665 has completed (purged errors)
[2025-11-26 02:42:43] 2025-11-26 01:41:42,513 | INFO     | overall cleanup function is called
[2025-11-26 02:42:43] 2025-11-26 01:41:43,521 | INFO     | --- collectZombieJob: --- 10, [1650976]
[2025-11-26 02:42:43] 2025-11-26 01:41:43,521 | INFO     | zombie collector waiting for pid 1650976
[2025-11-26 02:42:43] 2025-11-26 01:41:43,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:42:43] 2025-11-26 01:41:43,522 | INFO     | collected zombie processes
[2025-11-26 02:42:43] 2025-11-26 01:41:43,522 | INFO     | will attempt to kill all subprocesses of pid=1650976
[2025-11-26 02:42:43] 2025-11-26 01:41:43,556 | INFO     | process IDs to be killed: [1650976] (in reverse order)
[2025-11-26 02:42:43] 2025-11-26 01:41:43,575 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:42:43] 2025-11-26 01:41:43,575 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:42:43] 2025-11-26 01:41:43,576 | INFO     | did not find any defunct processes belonging to 1650976
[2025-11-26 02:42:43] 2025-11-26 01:41:43,576 | INFO     | did not find any defunct processes belonging to 1650976
[2025-11-26 02:42:43] 2025-11-26 01:41:43,577 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:42:43] 2025-11-26 01:41:43,577 | INFO     | ready for new job
[2025-11-26 02:42:43] 2025-11-26 01:41:43,577 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:42:43] 2025-11-26 01:41:43,578 | INFO     | ***************************************
[2025-11-26 02:42:43] 2025-11-26 01:41:43,578 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:42:43] 2025-11-26 01:41:43,578 | INFO     | ***************************************
[2025-11-26 02:42:43] 2025-11-26 01:41:43,578 | INFO     | 
[2025-11-26 02:42:43] 2025-11-26 01:41:43,578 | INFO     | architecture information:
[2025-11-26 02:42:43] 2025-11-26 01:41:43,578 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:42:43] 2025-11-26 01:41:43,583 | INFO     | cat /etc/os-release:
[2025-11-26 02:42:43] NAME="CentOS Linux"
[2025-11-26 02:42:43] VERSION="7 (Core)"
[2025-11-26 02:42:43] ID="centos"
[2025-11-26 02:42:43] ID_LIKE="rhel fedora"
[2025-11-26 02:42:43] VERSION_ID="7"
[2025-11-26 02:42:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:42:43] ANSI_COLOR="0;31"
[2025-11-26 02:42:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:42:43] HOME_URL="https://www.centos.org/"
[2025-11-26 02:42:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:42:43] 
[2025-11-26 02:42:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:42:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:42:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:42:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:42:43] 
[2025-11-26 02:42:43] 2025-11-26 01:41:43,583 | INFO     | ***************************************
[2025-11-26 02:42:43] 2025-11-26 01:41:44,087 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-26 02:42:43] 2025-11-26 01:41:44,096 | INFO     | sufficient remaining disk space (869562056704 B)
[2025-11-26 02:42:43] 2025-11-26 01:41:44,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:42:43] 2025-11-26 01:41:44,097 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:42:43] 2025-11-26 01:41:44,097 | INFO     | update_server=False
[2025-11-26 02:42:43] 2025-11-26 01:41:44,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:42:43] 2025-11-26 01:41:44,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:42:43] 2025-11-26 01:41:44,097 | INFO     | aborting loop
[2025-11-26 02:42:43] 2025-11-26 01:41:44,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:42:43] 2025-11-26 01:41:44,200 | INFO     | all job control threads have been joined
[2025-11-26 02:42:43] 2025-11-26 01:41:44,990 | INFO     | all data control threads have been joined
[2025-11-26 02:42:43] 2025-11-26 01:41:45,101 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:45,102 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:45,103 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:45,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:42:43] 2025-11-26 01:41:45,206 | INFO     | [job] control thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:45,255 | INFO     | all payload control threads have been joined
[2025-11-26 02:42:43] 2025-11-26 01:41:45,299 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:45,819 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:45,868 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:45,995 | INFO     | [data] control thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:46,024 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:42:43] 2025-11-26 01:41:46,062 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:46,227 | INFO     | [job] validate thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:46,227 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:46,261 | INFO     | [payload] control thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:46,363 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:47,194 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:50,030 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:41:54,550 | INFO     | job.realtimelogging is not enabled
[2025-11-26 02:42:43] 2025-11-26 01:41:55,556 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:42:43] 2025-11-26 01:42:14,395 | INFO     | PID=1644397 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 02:42:43] 2025-11-26 01:42:14,396 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:42:43] 2025-11-26 01:42:14,396 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:42:43] 2025-11-26 01:42:14,396 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:42:43] 2025-11-26 01:42:37,164 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:42:43] 2025-11-26 01:42:38,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140027074668352)>', '<ExcThread(monitor, started 140026377651968)>']
[2025-11-26 02:42:43] 2025-11-26 01:42:38,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:42:43] 2025-11-26 01:42:38,514 | INFO     | [monitor] control thread has ended
[2025-11-26 02:42:43] 2025-11-26 01:42:43,235 | INFO     | all workflow threads have been joined
[2025-11-26 02:42:43] 2025-11-26 01:42:43,236 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:42:43] 2025-11-26 01:42:43,236 | INFO     | traces error code: 0
[2025-11-26 02:42:43] 2025-11-26 01:42:43,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:42:43] 2025-11-26 01:42:43,282 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:42:43] 2025-11-26 01:42:43,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:42:43] 2025-11-26 01:42:43,284 [wrapper] pilotpid: 1644397
[2025-11-26 02:42:43] 2025-11-26 01:42:43,285 [wrapper] Pilot exit status: 0
[2025-11-26 02:42:43] 2025-11-26 01:42:43,288 [wrapper] pandaids: 6895559665
[2025-11-26 02:42:43] 2025-11-26 01:42:43,298 [wrapper] cleanup supervisor_pilot 1686743 1644398
[2025-11-26 02:42:43] 2025-11-26 01:42:43,299 [wrapper] Test setup, not cleaning
[2025-11-26 02:42:43] 2025-11-26 01:42:43,299 [wrapper] apfmon messages muted
[2025-11-26 02:42:43] 2025-11-26 01:42:43,300 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:42:43] 2025-11-26 01:42:43,301 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:42:43]  *** Error codes and diagnostics ***
[2025-11-26 02:42:43]     "exeErrorCode": 0,
[2025-11-26 02:42:43]     "exeErrorDiag": "",
[2025-11-26 02:42:43]     "pilotErrorCode": 0,
[2025-11-26 02:42:43]     "pilotErrorDiag": "",
[2025-11-26 02:42:43]  *** Listing of results directory ***
[2025-11-26 02:42:43] total 1299024
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc    576529 Nov 24 11:13 pilot3.tar.gz
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc      5112 Nov 24 11:51 queuedata.json
[2025-11-26 02:42:43] -rwx------ 1 boinc boinc     36292 Nov 24 11:51 runpilot2-wrapper.sh
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc       100 Nov 25 20:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:42:43] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 20:37 run_atlas
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc       105 Nov 25 20:37 job.xml
[2025-11-26 02:42:43] -rw-r--r-- 2 boinc boinc 407930194 Nov 25 20:37 EVNT.47483658._001312.pool.root.1
[2025-11-26 02:42:43] -rw-r--r-- 2 boinc boinc     15847 Nov 25 20:37 start_atlas.sh
[2025-11-26 02:42:43] drwxrwx--x 2 boinc boinc        68 Nov 25 20:37 shared
[2025-11-26 02:42:43] -rw-r--r-- 2 boinc boinc    590106 Nov 25 20:37 input.tar.gz
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc      6551 Nov 25 20:37 init_data.xml
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc         0 Nov 25 20:37 boinc_lockfile
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc      2786 Nov 25 20:37 pandaJob.out
[2025-11-26 02:42:43] -rw------- 1 boinc boinc    991893 Nov 25 20:38 agis_schedconf.cvmfs.json
[2025-11-26 02:42:43] drwx------ 5 boinc boinc      4096 Nov 25 20:38 pilot3
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc       532 Nov 26 02:38 boinc_task_state.xml
[2025-11-26 02:42:43] -rw------- 1 boinc boinc 909372740 Nov 26 02:41 HITS.47556149._002982.pool.root.1
[2025-11-26 02:42:43] -rw------- 1 boinc boinc      1031 Nov 26 02:41 memory_monitor_summary.json
[2025-11-26 02:42:43] -rw------- 1 boinc boinc   1516240 Nov 26 02:41 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:42:43] -rw------- 1 boinc boinc   1412145 Nov 26 02:41 log.47556149._002982.job.log.tgz.1
[2025-11-26 02:42:43] -rw------- 1 boinc boinc      8605 Nov 26 02:41 heartbeat.json
[2025-11-26 02:42:43] -rw------- 1 boinc boinc        95 Nov 26 02:42 pilot_heartbeat.json
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc      8192 Nov 26 02:42 boinc_mmap_file
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc        29 Nov 26 02:42 wrapper_checkpoint.txt
[2025-11-26 02:42:43] -rw------- 1 boinc boinc      4821 Nov 26 02:42 pilotlog.txt
[2025-11-26 02:42:43] -rw------- 1 boinc boinc   3084476 Nov 26 02:42 log.47556149._002982.job.log.1
[2025-11-26 02:42:43] -rw------- 1 boinc boinc       353 Nov 26 02:42 output.list
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc       620 Nov 26 02:42 runtime_log
[2025-11-26 02:42:43] -rw------- 1 boinc boinc   4515840 Nov 26 02:42 result.tar.gz
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc      8831 Nov 26 02:42 runtime_log.err
[2025-11-26 02:42:43] -rw------- 1 boinc boinc       664 Nov 26 02:42 LkYKDmvLjh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmh1IKDmS0WScn.diag
[2025-11-26 02:42:43] -rw-r--r-- 1 boinc boinc     21378 Nov 26 02:42 stderr.txt
[2025-11-26 02:42:43] HITS file was successfully produced:
[2025-11-26 02:42:43] -rw------- 1 boinc boinc 909372740 Nov 26 02:41 shared/HITS.pool.root.1
[2025-11-26 02:42:43]  *** Contents of shared directory: ***
[2025-11-26 02:42:43] total 1291440
[2025-11-26 02:42:43] -rw-r--r-- 2 boinc boinc 407930194 Nov 25 20:37 ATLAS.root_0
[2025-11-26 02:42:43] -rw-r--r-- 2 boinc boinc     15847 Nov 25 20:37 start_atlas.sh
[2025-11-26 02:42:43] -rw-r--r-- 2 boinc boinc    590106 Nov 25 20:37 input.tar.gz
[2025-11-26 02:42:43] -rw------- 1 boinc boinc 909372740 Nov 26 02:41 HITS.pool.root.1
[2025-11-26 02:42:43] -rw------- 1 boinc boinc   4515840 Nov 26 02:42 result.tar.gz
02:42:44 (1640699): run_atlas exited; CPU time 100232.552208
02:42:44 (1640699): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN