Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:04:05 (22364): wrapper (7.7.26015): starting
23:04:05 (22364): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 23:04:05] Arguments: --nthreads 8
[2025-11-27 23:04:05] Threads: 8
[2025-11-27 23:04:05] Checking for CVMFS
[2025-11-27 23:04:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 23:04:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 23:04:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 23:04:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 23:04:07] 2.11.2.0 9336 84459 89224 153385 1 85 18474689 25165825 1288 130560 12 25308131 99.890 13961008 1648 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 23:04:07] CVMFS is ok
[2025-11-27 23:04:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 23:04:07] Checking for apptainer binary...
[2025-11-27 23:04:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 23:04:07] Running /usr/bin/apptainer --version
[2025-11-27 23:04:07] apptainer version 1.3.2-1.el7
[2025-11-27 23:04:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 23:04:26] cg-vwn413.simple-grid.lan
[2025-11-27 23:04:26] apptainer works
[2025-11-27 23:04:26] Set ATHENA_PROC_NUMBER=8
[2025-11-27 23:04:26] Set ATHENA_CORE_NUMBER=8
[2025-11-27 23:04:26] Starting ATLAS job with PandaID=6895559448
[2025-11-27 23:04:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 22:30:41]  *** The last 200 lines of the pilot log: ***
[2025-11-28 22:30:41] 2025-11-28 21:29:24,512 | INFO     | time since job start (84078s) is within the limit (172800.0s)
[2025-11-28 22:30:41] 2025-11-28 21:29:24,522 | INFO     | monitor loop #5681: job 0:6895559448 is in state 'finished'
[2025-11-28 22:30:41] 2025-11-28 21:29:24,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 22:30:41] 2025-11-28 21:29:26,519 | INFO     | time since job start (84080s) is within the limit (172800.0s)
[2025-11-28 22:30:41] 2025-11-28 21:29:27,032 | INFO     | monitor loop #5682: job 0:6895559448 is in state 'finished'
[2025-11-28 22:30:41] 2025-11-28 21:29:27,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 22:30:41] 2025-11-28 21:29:28,531 | INFO     | time since job start (84082s) is within the limit (172800.0s)
[2025-11-28 22:30:41] 2025-11-28 21:29:29,543 | INFO     | monitor loop #5683: job 0:6895559448 is in state 'finished'
[2025-11-28 22:30:41] 2025-11-28 21:29:29,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 22:30:41] 2025-11-28 21:29:30,547 | INFO     | time since job start (84084s) is within the limit (172800.0s)
[2025-11-28 22:30:41] 2025-11-28 21:29:31,746 | INFO     | PID=26194 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 22:30:41] 2025-11-28 21:29:31,746 | INFO     | .. there are 9 such processes running
[2025-11-28 22:30:41] 2025-11-28 21:29:31,831 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 22:30:41] 2025-11-28 21:29:31,832 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 22:30:41] 2025-11-28 21:29:31,834 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6895559448/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 22:30:41] 2025-11-28 21:29:31,835 | INFO     | extracted standard info from prmon json
[2025-11-28 22:30:41] 2025-11-28 21:29:31,835 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 22:30:41] 2025-11-28 21:29:31,835 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 22:30:41] 2025-11-28 21:29:31,866 | INFO     | fitting pss+swap vs Time
[2025-11-28 22:30:41] 2025-11-28 21:29:31,869 | INFO     | sum of square deviations: 795588166204.0325
[2025-11-28 22:30:41] 2025-11-28 21:29:31,946 | INFO     | sum of deviations: 3299001820923.8335
[2025-11-28 22:30:41] 2025-11-28 21:29:31,946 | INFO     | mean x: 1764323535.093499
[2025-11-28 22:30:41] 2025-11-28 21:29:31,946 | INFO     | mean y: 2844793.0482103727
[2025-11-28 22:30:41] 2025-11-28 21:29:31,947 | INFO     | intersect: -7313134506.572909
[2025-11-28 22:30:41] 2025-11-28 21:29:31,948 | INFO     | chi2: 20.676045759218276
[2025-11-28 22:30:41] 2025-11-28 21:29:31,950 | INFO     | sum of square deviations: 786903232028.0322
[2025-11-28 22:30:41] 2025-11-28 21:29:32,018 | INFO     | sum of deviations: 3752018963839.356
[2025-11-28 22:30:41] 2025-11-28 21:29:32,018 | INFO     | mean x: 1764323382.5975072
[2025-11-28 22:30:41] 2025-11-28 21:29:32,019 | INFO     | mean y: 2852746.5762463342
[2025-11-28 22:30:41] 2025-11-28 21:29:32,019 | INFO     | intersect: -8409585429.322906
[2025-11-28 22:30:41] 2025-11-28 21:29:32,020 | INFO     | chi2: 17.479605208717967
[2025-11-28 22:30:41] 2025-11-28 21:29:32,020 | INFO     | current chi2=17.479605208717967 (change=15.45963182575758 %)
[2025-11-28 22:30:41] 2025-11-28 21:29:32,020 | INFO     | right removable region: 1363
[2025-11-28 22:30:41] 2025-11-28 21:29:32,022 | INFO     | sum of square deviations: 786902318858.0317
[2025-11-28 22:30:41] 2025-11-28 21:29:32,060 | INFO     | monitor loop #5684: job 0:6895559448 is in state 'finished'
[2025-11-28 22:30:41] 2025-11-28 21:29:32,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 22:30:41] 2025-11-28 21:29:32,074 | INFO     | sum of deviations: 2727521332070.4287
[2025-11-28 22:30:41] 2025-11-28 21:29:32,074 | INFO     | mean x: 1764323687.5975072
[2025-11-28 22:30:41] 2025-11-28 21:29:32,074 | INFO     | mean y: 2854826.1282991203
[2025-11-28 22:30:41] 2025-11-28 21:29:32,074 | INFO     | intersect: -6112555408.756977
[2025-11-28 22:30:41] 2025-11-28 21:29:32,076 | INFO     | chi2: 16.031176286587836
[2025-11-28 22:30:41] 2025-11-28 21:29:32,076 | INFO     | current chi2=16.031176286587836 (change=22.464979651921865 %)
[2025-11-28 22:30:41] 2025-11-28 21:29:32,076 | INFO     | left removable region: 10
[2025-11-28 22:30:41] 2025-11-28 21:29:32,078 | INFO     | sum of square deviations: 768017542588.6837
[2025-11-28 22:30:41] 2025-11-28 21:29:32,154 | INFO     | sum of deviations: 2818471925213.031
[2025-11-28 22:30:41] 2025-11-28 21:29:32,155 | INFO     | mean x: 1764323657.10643
[2025-11-28 22:30:41] 2025-11-28 21:29:32,155 | INFO     | mean y: 2872903.7775314115
[2025-11-28 22:30:41] 2025-11-28 21:29:32,155 | INFO     | intersect: -6471844688.977783
[2025-11-28 22:30:41] 2025-11-28 21:29:32,156 | INFO     | chi2: 9.071802095798226
[2025-11-28 22:30:41] 2025-11-28 21:29:32,157 | INFO     | current memory leak: 3.67 B/s (using 1353 data points, chi2=9.07)
[2025-11-28 22:30:41] 2025-11-28 21:29:32,158 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-28 22:30:41] 2025-11-28 21:29:32,158 | INFO     | ..............................
[2025-11-28 22:30:41] 2025-11-28 21:29:32,158 | INFO     | . Timing measurements:
[2025-11-28 22:30:41] 2025-11-28 21:29:32,159 | INFO     | . get job = 0 s
[2025-11-28 22:30:41] 2025-11-28 21:29:32,159 | INFO     | . initial setup = 11 s
[2025-11-28 22:30:41] 2025-11-28 21:29:32,159 | INFO     | . payload setup = 160 s
[2025-11-28 22:30:41] 2025-11-28 21:29:32,159 | INFO     | . stage-in = 0 s
[2025-11-28 22:30:41] 2025-11-28 21:29:32,159 | INFO     | . payload execution = 83618 s
[2025-11-28 22:30:41] 2025-11-28 21:29:32,159 | INFO     | . stage-out = 5 s
[2025-11-28 22:30:41] 2025-11-28 21:29:32,159 | INFO     | . log creation = 2 s
[2025-11-28 22:30:41] 2025-11-28 21:29:32,159 | INFO     | ..............................
[2025-11-28 22:30:41] 2025-11-28 21:29:32,351 | INFO     | 
[2025-11-28 22:30:41] 2025-11-28 21:29:32,352 | INFO     | job summary report
[2025-11-28 22:30:41] 2025-11-28 21:29:32,352 | INFO     | --------------------------------------------------
[2025-11-28 22:30:41] 2025-11-28 21:29:32,352 | INFO     | PanDA job id: 6895559448
[2025-11-28 22:30:41] 2025-11-28 21:29:32,352 | INFO     | task id: 47556149
[2025-11-28 22:30:41] 2025-11-28 21:29:32,352 | INFO     | errors: (none)
[2025-11-28 22:30:41] 2025-11-28 21:29:32,352 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 22:30:41] 2025-11-28 21:29:32,352 | INFO     | pilot state: finished 
[2025-11-28 22:30:41] 2025-11-28 21:29:32,352 | INFO     | transexitcode: 0
[2025-11-28 22:30:41] 2025-11-28 21:29:32,352 | INFO     | exeerrorcode: 0
[2025-11-28 22:30:41] 2025-11-28 21:29:32,352 | INFO     | exeerrordiag: 
[2025-11-28 22:30:41] 2025-11-28 21:29:32,353 | INFO     | exitcode: 0
[2025-11-28 22:30:41] 2025-11-28 21:29:32,353 | INFO     | exitmsg: OK
[2025-11-28 22:30:41] 2025-11-28 21:29:32,353 | INFO     | cpuconsumptiontime: 316647 s
[2025-11-28 22:30:41] 2025-11-28 21:29:32,353 | INFO     | nevents: 1000
[2025-11-28 22:30:41] 2025-11-28 21:29:32,353 | INFO     | neventsw: 0
[2025-11-28 22:30:41] 2025-11-28 21:29:32,353 | INFO     | pid: 32718
[2025-11-28 22:30:41] 2025-11-28 21:29:32,353 | INFO     | pgrp: 32718
[2025-11-28 22:30:41] 2025-11-28 21:29:32,353 | INFO     | corecount: 8
[2025-11-28 22:30:41] 2025-11-28 21:29:32,353 | INFO     | event service: False
[2025-11-28 22:30:41] 2025-11-28 21:29:32,353 | INFO     | sizes: {0: 2283486, 1: 2284172, 2: 2284371, 13: 2284371, 24: 2284427, 35: 2284455, 45: 2284611, 56: 2284639, 67: 2284667, 77: 2284695, 88: 2284751, 99: 2285321, 11
[2025-11-28 22:30:41] 2025-11-28 21:29:32,353 | INFO     | --------------------------------------------------
[2025-11-28 22:30:41] 2025-11-28 21:29:32,353 | INFO     | 
[2025-11-28 22:30:41] 2025-11-28 21:29:32,354 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-11-28 22:30:41] 2025-11-28 21:29:32,747 | INFO     | time since job start (84086s) is within the limit (172800.0s)
[2025-11-28 22:30:41] 2025-11-28 21:29:32,883 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,883 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,883 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,883 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,883 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,884 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 22:30:41] 2025-11-28 21:29:32,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,885 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 22:30:41] 2025-11-28 21:29:32,885 | INFO     | job 6895559448 has completed (purged errors)
[2025-11-28 22:30:41] 2025-11-28 21:29:32,885 | INFO     | overall cleanup function is called
[2025-11-28 22:30:41] 2025-11-28 21:29:33,900 | INFO     | --- collectZombieJob: --- 10, [32718]
[2025-11-28 22:30:41] 2025-11-28 21:29:33,901 | INFO     | zombie collector waiting for pid 32718
[2025-11-28 22:30:41] 2025-11-28 21:29:33,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 22:30:41] 2025-11-28 21:29:33,901 | INFO     | collected zombie processes
[2025-11-28 22:30:41] 2025-11-28 21:29:33,901 | INFO     | will attempt to kill all subprocesses of pid=32718
[2025-11-28 22:30:41] 2025-11-28 21:29:33,991 | INFO     | process IDs to be killed: [32718] (in reverse order)
[2025-11-28 22:30:41] 2025-11-28 21:29:35,068 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 22:30:41] 2025-11-28 21:29:35,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 22:30:41] 2025-11-28 21:29:35,071 | INFO     | did not find any defunct processes belonging to 32718
[2025-11-28 22:30:41] 2025-11-28 21:29:35,074 | INFO     | did not find any defunct processes belonging to 32718
[2025-11-28 22:30:41] 2025-11-28 21:29:35,152 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 22:30:41] 2025-11-28 21:29:35,152 | INFO     | ready for new job
[2025-11-28 22:30:41] 2025-11-28 21:29:35,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 22:30:41] 2025-11-28 21:29:35,157 | INFO     | ***************************************
[2025-11-28 22:30:41] 2025-11-28 21:29:35,157 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 22:30:41] 2025-11-28 21:29:35,157 | INFO     | ***************************************
[2025-11-28 22:30:41] 2025-11-28 21:29:35,157 | INFO     | 
[2025-11-28 22:30:41] 2025-11-28 21:29:35,158 | INFO     | pilot is running in a VM
[2025-11-28 22:30:41] 2025-11-28 21:29:35,158 | INFO     | architecture information:
[2025-11-28 22:30:41] 2025-11-28 21:29:35,172 | INFO     | executing command: cat /etc/os-release
[2025-11-28 22:30:41] 2025-11-28 21:29:35,400 | INFO     | cat /etc/os-release:
[2025-11-28 22:30:41] NAME="CentOS Linux"
[2025-11-28 22:30:41] VERSION="7 (Core)"
[2025-11-28 22:30:41] ID="centos"
[2025-11-28 22:30:41] ID_LIKE="rhel fedora"
[2025-11-28 22:30:41] VERSION_ID="7"
[2025-11-28 22:30:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 22:30:41] ANSI_COLOR="0;31"
[2025-11-28 22:30:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 22:30:41] HOME_URL="https://www.centos.org/"
[2025-11-28 22:30:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 22:30:41] 
[2025-11-28 22:30:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 22:30:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 22:30:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 22:30:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 22:30:41] 
[2025-11-28 22:30:41] 2025-11-28 21:29:35,400 | INFO     | ***************************************
[2025-11-28 22:30:41] 2025-11-28 21:29:35,904 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-11-28 22:30:41] 2025-11-28 21:29:36,181 | INFO     | sufficient remaining disk space (495486763008 B)
[2025-11-28 22:30:41] 2025-11-28 21:29:36,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 22:30:41] 2025-11-28 21:29:36,181 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 22:30:41] 2025-11-28 21:29:36,181 | INFO     | update_server=False
[2025-11-28 22:30:41] 2025-11-28 21:29:36,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 22:30:41] 2025-11-28 21:29:36,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 22:30:41] 2025-11-28 21:29:36,183 | INFO     | aborting loop
[2025-11-28 22:30:41] 2025-11-28 21:29:36,183 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 22:30:41] 2025-11-28 21:29:36,402 | INFO     | all job control threads have been joined
[2025-11-28 22:30:41] 2025-11-28 21:29:36,766 | INFO     | all payload control threads have been joined
[2025-11-28 22:30:41] 2025-11-28 21:29:37,188 | INFO     | [job] retrieve thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:37,189 | INFO     | [job] job monitor thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:37,219 | INFO     | [job] validate thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:37,283 | INFO     | all data control threads have been joined
[2025-11-28 22:30:41] 2025-11-28 21:29:37,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 22:30:41] 2025-11-28 21:29:37,408 | INFO     | [job] control thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:37,430 | INFO     | [payload] validate_post thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:37,548 | INFO     | [payload] failed_post thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:37,772 | INFO     | [payload] control thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:38,146 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:38,190 | INFO     | [data] copytool_out thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:38,289 | INFO     | [data] control thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:38,373 | INFO     | [job] queue monitor thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:38,426 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:38,500 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:38,536 | INFO     | [data] copytool_in thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:38,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 22:30:41] 2025-11-28 21:29:42,724 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:29:46,645 | INFO     | job.realtimelogging is not enabled
[2025-11-28 22:30:41] 2025-11-28 21:29:47,651 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 22:30:41] 2025-11-28 21:30:05,903 | INFO     | PID=26194 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 22:30:41] 2025-11-28 21:30:05,903 | INFO     | .. there are 9 such processes running
[2025-11-28 22:30:41] 2025-11-28 21:30:05,907 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 22:30:41] 2025-11-28 21:30:05,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 22:30:41] 2025-11-28 21:30:05,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 22:30:41] 2025-11-28 21:30:32,791 | INFO     | [monitor] cgroup control has ended
[2025-11-28 22:30:41] 2025-11-28 21:30:33,173 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866110031680)>', '<ExcThread(monitor, started 139865517704960)>']
[2025-11-28 22:30:41] 2025-11-28 21:30:34,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 22:30:41] 2025-11-28 21:30:34,075 | INFO     | [monitor] control thread has ended
[2025-11-28 22:30:41] 2025-11-28 21:30:38,199 | INFO     | all workflow threads have been joined
[2025-11-28 22:30:41] 2025-11-28 21:30:38,200 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 22:30:41] 2025-11-28 21:30:38,200 | INFO     | traces error code: 0
[2025-11-28 22:30:41] 2025-11-28 21:30:38,200 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 22:30:41] 2025-11-28 21:30:38,493 [wrapper] ==== pilot stdout END ====
[2025-11-28 22:30:41] 2025-11-28 21:30:38,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 22:30:41] 2025-11-28 21:30:38,695 [wrapper] pilotpid: 26194
[2025-11-28 22:30:41] 2025-11-28 21:30:38,800 [wrapper] Pilot exit status: 0
[2025-11-28 22:30:41] 2025-11-28 21:30:39,128 [wrapper] pandaids: 6895559448
[2025-11-28 22:30:41] 2025-11-28 21:30:39,749 [wrapper] cleanup supervisor_pilot 26383 26195
[2025-11-28 22:30:41] 2025-11-28 21:30:39,774 [wrapper] Test setup, not cleaning
[2025-11-28 22:30:41] 2025-11-28 21:30:39,780 [wrapper] apfmon messages muted
[2025-11-28 22:30:41] 2025-11-28 21:30:39,782 [wrapper] ==== wrapper stdout END ====
[2025-11-28 22:30:41] 2025-11-28 21:30:39,786 [wrapper] ==== wrapper stderr END ====
[2025-11-28 22:30:41]  *** Error codes and diagnostics ***
[2025-11-28 22:30:41]     "exeErrorCode": 0,
[2025-11-28 22:30:41]     "exeErrorDiag": "",
[2025-11-28 22:30:41]     "pilotErrorCode": 0,
[2025-11-28 22:30:41]     "pilotErrorDiag": "",
[2025-11-28 22:30:41]  *** Listing of results directory ***
[2025-11-28 22:30:41] total 1327692
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc    576529 Nov 24 11:13 pilot3.tar.gz
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc      5112 Nov 24 11:31 queuedata.json
[2025-11-28 22:30:41] -rwx------. 1 boinc boinc     36292 Nov 24 11:31 runpilot2-wrapper.sh
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc       100 Nov 27 23:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 22:30:41] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 23:04 run_atlas
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc       105 Nov 27 23:04 job.xml
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc      6393 Nov 27 23:04 init_data.xml
[2025-11-28 22:30:41] -rw-r--r--. 2 boinc boinc 410001939 Nov 27 23:04 EVNT.47483658._001307.pool.root.1
[2025-11-28 22:30:41] -rw-r--r--. 2 boinc boinc     15847 Nov 27 23:04 start_atlas.sh
[2025-11-28 22:30:41] drwxrwx--x. 2 boinc boinc        68 Nov 27 23:04 shared
[2025-11-28 22:30:41] -rw-r--r--. 2 boinc boinc    590104 Nov 27 23:04 input.tar.gz
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc         0 Nov 27 23:04 boinc_lockfile
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc      2785 Nov 27 23:04 pandaJob.out
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc    991540 Nov 27 23:07 agis_schedconf.cvmfs.json
[2025-11-28 22:30:41] drwx------. 5 boinc boinc      4096 Nov 27 23:08 pilot3
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc       533 Nov 28 22:06 boinc_task_state.xml
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc 918302726 Nov 28 22:26 HITS.47556149._002935.pool.root.1
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc      1030 Nov 28 22:27 memory_monitor_summary.json
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc   1516240 Nov 28 22:27 agis_ddmendpoints.agis.ALL.json
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc   2449664 Nov 28 22:28 log.47556149._002935.job.log.tgz.1
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc      7944 Nov 28 22:29 heartbeat.json
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc        95 Nov 28 22:30 pilot_heartbeat.json
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc      8192 Nov 28 22:30 boinc_mmap_file
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc        29 Nov 28 22:30 wrapper_checkpoint.txt
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc      4957 Nov 28 22:30 pilotlog.txt
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc  11220962 Nov 28 22:30 log.47556149._002935.job.log.1
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc       353 Nov 28 22:30 output.list
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc       620 Nov 28 22:30 runtime_log
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc  13690880 Nov 28 22:30 result.tar.gz
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc      8833 Nov 28 22:30 runtime_log.err
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc       662 Nov 28 22:30 B1cNDm81ih8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmz0IKDmut6Wfn.diag
[2025-11-28 22:30:41] -rw-r--r--. 1 boinc boinc     21478 Nov 28 22:30 stderr.txt
[2025-11-28 22:30:41] HITS file was successfully produced:
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc 918302726 Nov 28 22:26 shared/HITS.pool.root.1
[2025-11-28 22:30:41]  *** Contents of shared directory: ***
[2025-11-28 22:30:41] total 1311148
[2025-11-28 22:30:41] -rw-r--r--. 2 boinc boinc 410001939 Nov 27 23:04 ATLAS.root_0
[2025-11-28 22:30:41] -rw-r--r--. 2 boinc boinc     15847 Nov 27 23:04 start_atlas.sh
[2025-11-28 22:30:41] -rw-r--r--. 2 boinc boinc    590104 Nov 27 23:04 input.tar.gz
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc 918302726 Nov 28 22:26 HITS.pool.root.1
[2025-11-28 22:30:41] -rw-------. 1 boinc boinc  13690880 Nov 28 22:30 result.tar.gz
22:30:43 (22364): run_atlas exited; CPU time 317220.907735
22:30:43 (22364): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN