Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:12:32 (1258006): wrapper (7.7.26015): starting
10:12:32 (1258006): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 10:12:32] Arguments: --nthreads 8
[2025-11-26 10:12:32] Threads: 8
[2025-11-26 10:12:32] Checking for CVMFS
[2025-11-26 10:12:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:12:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:12:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:12:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:12:32] 2.13.2.0 6818 6864 79908 153315 2 81 3813304 4097024 0 130560 0 3125601 99.983 242769 15214 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-26 10:12:32] CVMFS is ok
[2025-11-26 10:12:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:12:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:12:32] Further information can be found at the LHC@home message board.
[2025-11-26 10:12:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:12:32] Checking for apptainer binary...
[2025-11-26 10:12:32] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-26 10:12:32] apptainer is not installed, using version from CVMFS
[2025-11-26 10:12:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:12:33] pckeatlas02
[2025-11-26 10:12:33] apptainer works
[2025-11-26 10:12:33] Set ATHENA_PROC_NUMBER=8
[2025-11-26 10:12:33] Set ATHENA_CORE_NUMBER=8
[2025-11-26 10:12:33] Starting ATLAS job with PandaID=6896242987
[2025-11-26 10:12:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:56:30]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:56:30] 2025-11-26 16:55:51,060 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 17:56:30] 2025-11-26 16:55:52,195 | INFO     | time since job start (27795s) is within the limit (172800.0s)
[2025-11-26 17:56:30] 2025-11-26 16:55:53,248 | INFO     | PID=1261759 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:56:30] 2025-11-26 16:55:53,251 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 17:56:30] 2025-11-26 16:55:53,251 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3848.504
[2025-11-26 17:56:30] 2025-11-26 16:55:53,252 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6896242987/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:56:30] 2025-11-26 16:55:53,252 | INFO     | extracted standard info from prmon json
[2025-11-26 17:56:30] 2025-11-26 16:55:53,252 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:56:30] 2025-11-26 16:55:53,252 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:56:30] 2025-11-26 16:55:53,255 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:56:30] 2025-11-26 16:55:53,256 | INFO     | sum of square deviations: 29401593130.0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,258 | INFO     | sum of deviations: 433029622958.0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,258 | INFO     | mean x: 1764162253.5
[2025-11-26 17:56:30] 2025-11-26 16:55:53,258 | INFO     | mean y: 3040493.5921052634
[2025-11-26 17:56:30] 2025-11-26 16:55:53,258 | INFO     | intersect: -25979718743.027554
[2025-11-26 17:56:30] 2025-11-26 16:55:53,258 | INFO     | chi2: 3.245777601509457
[2025-11-26 17:56:30] 2025-11-26 16:55:53,259 | INFO     | sum of square deviations: 28444998450.0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,261 | INFO     | sum of deviations: 535317434284.0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,261 | INFO     | mean x: 1764162101.0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,261 | INFO     | mean y: 3056740.2128603105
[2025-11-26 17:56:30] 2025-11-26 16:55:53,261 | INFO     | intersect: -33197392584.065125
[2025-11-26 17:56:30] 2025-11-26 16:55:53,261 | INFO     | chi2: 1.4942616676347216
[2025-11-26 17:56:30] 2025-11-26 16:55:53,261 | INFO     | current chi2=1.4942616676347216 (change=53.9629065485013 %)
[2025-11-26 17:56:30] 2025-11-26 16:55:53,261 | INFO     | sum of square deviations: 27509380907.5
[2025-11-26 17:56:30] 2025-11-26 16:55:53,263 | INFO     | sum of deviations: 524576940322.5
[2025-11-26 17:56:30] 2025-11-26 16:55:53,263 | INFO     | mean x: 1764161948.5
[2025-11-26 17:56:30] 2025-11-26 16:55:53,263 | INFO     | mean y: 3054989.414798206
[2025-11-26 17:56:30] 2025-11-26 16:55:53,263 | INFO     | intersect: -33637784849.521873
[2025-11-26 17:56:30] 2025-11-26 16:55:53,264 | INFO     | chi2: 1.490196043959776
[2025-11-26 17:56:30] 2025-11-26 16:55:53,264 | INFO     | current chi2=1.490196043959776 (change=0.27208244466186304 %)
[2025-11-26 17:56:30] 2025-11-26 16:55:53,264 | INFO     | right removable region: 445
[2025-11-26 17:56:30] 2025-11-26 16:55:53,264 | INFO     | sum of square deviations: 28444998450.0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,266 | INFO     | sum of deviations: 343926566352.0001
[2025-11-26 17:56:30] 2025-11-26 16:55:53,266 | INFO     | mean x: 1764162406.0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,266 | INFO     | mean y: 3054641.8802660755
[2025-11-26 17:56:30] 2025-11-26 16:55:53,266 | INFO     | intersect: -21327314556.394844
[2025-11-26 17:56:30] 2025-11-26 16:55:53,266 | INFO     | chi2: 1.9556500438612612
[2025-11-26 17:56:30] 2025-11-26 16:55:53,266 | INFO     | current chi2=1.9556500438612612 (change=39.74787296111165 %)
[2025-11-26 17:56:30] 2025-11-26 16:55:53,267 | INFO     | sum of square deviations: 27509380907.5
[2025-11-26 17:56:30] 2025-11-26 16:55:53,269 | INFO     | sum of deviations: 312143549081.99994
[2025-11-26 17:56:30] 2025-11-26 16:55:53,269 | INFO     | mean x: 1764162558.5
[2025-11-26 17:56:30] 2025-11-26 16:55:53,269 | INFO     | mean y: 3059819.946188341
[2025-11-26 17:56:30] 2025-11-26 16:55:53,269 | INFO     | intersect: -20014546683.79157
[2025-11-26 17:56:30] 2025-11-26 16:55:53,269 | INFO     | chi2: 1.9082050445210186
[2025-11-26 17:56:30] 2025-11-26 16:55:53,269 | INFO     | current chi2=1.9082050445210186 (change=2.426047517508121 %)
[2025-11-26 17:56:30] 2025-11-26 16:55:53,269 | INFO     | left removable region: 20
[2025-11-26 17:56:30] 2025-11-26 16:55:53,269 | INFO     | sum of square deviations: 23803609100.0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,271 | INFO     | sum of deviations: 352223233935.99994
[2025-11-26 17:56:30] 2025-11-26 16:55:53,271 | INFO     | mean x: 1764162528.0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,271 | INFO     | mean y: 3083664.3929411764
[2025-11-26 17:56:30] 2025-11-26 16:55:53,271 | INFO     | intersect: -26101320427.87847
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | chi2: 0.10863346228043538
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | current memory leak: 14.80 B/s (using 425 data points, chi2=0.11)
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | could have reported an average CPU frequency of 3781 MHz (19 samples)
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | ..............................
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | . Timing measurements:
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | . get job = 0 s
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | . initial setup = 0 s
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | . payload setup = 3 s
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | . stage-in = 0 s
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | . payload execution = 27770 s
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | . stage-out = 0 s
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | . log creation = 0 s
[2025-11-26 17:56:30] 2025-11-26 16:55:53,272 | INFO     | ..............................
[2025-11-26 17:56:30] 2025-11-26 16:55:53,307 | INFO     | 
[2025-11-26 17:56:30] 2025-11-26 16:55:53,307 | INFO     | job summary report
[2025-11-26 17:56:30] 2025-11-26 16:55:53,307 | INFO     | --------------------------------------------------
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | PanDA job id: 6896242987
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | task id: 47556173
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | errors: (none)
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | pilot state: finished 
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | transexitcode: 0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | exeerrorcode: 0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | exeerrordiag: 
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | exitcode: 0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | exitmsg: OK
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | cpuconsumptiontime: 216534 s
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | nevents: 1000
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | neventsw: 0
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | pid: 1269080
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | pgrp: 1269080
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | corecount: 8
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | event service: False
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | sizes: {0: 2284314, 2: 2284576, 11: 2284604, 27778: 2322697, 27779: 2331749, 27784: 2331939}
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | --------------------------------------------------
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | 
[2025-11-26 17:56:30] 2025-11-26 16:55:53,308 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-11-26 17:56:30] 2025-11-26 16:55:53,317 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,317 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,317 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,317 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | job 6896242987 has completed (purged errors)
[2025-11-26 17:56:30] 2025-11-26 16:55:53,318 | INFO     | overall cleanup function is called
[2025-11-26 17:56:30] 2025-11-26 16:55:54,328 | INFO     | --- collectZombieJob: --- 10, [1269080]
[2025-11-26 17:56:30] 2025-11-26 16:55:54,328 | INFO     | zombie collector waiting for pid 1269080
[2025-11-26 17:56:30] 2025-11-26 16:55:54,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:56:30] 2025-11-26 16:55:54,328 | INFO     | collected zombie processes
[2025-11-26 17:56:30] 2025-11-26 16:55:54,328 | INFO     | will attempt to kill all subprocesses of pid=1269080
[2025-11-26 17:56:30] 2025-11-26 16:55:54,358 | INFO     | process IDs to be killed: [1269080] (in reverse order)
[2025-11-26 17:56:30] 2025-11-26 16:55:54,374 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:56:30] 2025-11-26 16:55:54,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:56:30] 2025-11-26 16:55:54,375 | INFO     | did not find any defunct processes belonging to 1269080
[2025-11-26 17:56:30] 2025-11-26 16:55:54,376 | INFO     | did not find any defunct processes belonging to 1269080
[2025-11-26 17:56:30] 2025-11-26 16:55:54,376 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:56:30] 2025-11-26 16:55:54,376 | INFO     | ready for new job
[2025-11-26 17:56:30] 2025-11-26 16:55:54,376 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:56:30] 2025-11-26 16:55:54,377 | INFO     | ***************************************
[2025-11-26 17:56:30] 2025-11-26 16:55:54,377 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:56:30] 2025-11-26 16:55:54,377 | INFO     | ***************************************
[2025-11-26 17:56:30] 2025-11-26 16:55:54,377 | INFO     | 
[2025-11-26 17:56:30] 2025-11-26 16:55:54,378 | INFO     | architecture information:
[2025-11-26 17:56:30] 2025-11-26 16:55:54,378 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:56:30] 2025-11-26 16:55:54,383 | INFO     | cat /etc/os-release:
[2025-11-26 17:56:30] NAME="CentOS Linux"
[2025-11-26 17:56:30] VERSION="7 (Core)"
[2025-11-26 17:56:30] ID="centos"
[2025-11-26 17:56:30] ID_LIKE="rhel fedora"
[2025-11-26 17:56:30] VERSION_ID="7"
[2025-11-26 17:56:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:56:30] ANSI_COLOR="0;31"
[2025-11-26 17:56:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:56:30] HOME_URL="https://www.centos.org/"
[2025-11-26 17:56:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:56:30] 
[2025-11-26 17:56:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:56:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:56:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:56:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:56:30] 
[2025-11-26 17:56:30] 2025-11-26 16:55:54,384 | INFO     | ***************************************
[2025-11-26 17:56:30] 2025-11-26 16:55:54,886 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-11-26 17:56:30] 2025-11-26 16:55:54,894 | INFO     | sufficient remaining disk space (115138887680 B)
[2025-11-26 17:56:30] 2025-11-26 16:55:54,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:56:30] 2025-11-26 16:55:54,894 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:56:30] 2025-11-26 16:55:54,894 | INFO     | update_server=False
[2025-11-26 17:56:30] 2025-11-26 16:55:54,894 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:56:30] 2025-11-26 16:55:54,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:56:30] 2025-11-26 16:55:54,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:56:30] 2025-11-26 16:55:54,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:56:30] 2025-11-26 16:55:54,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:56:30] 2025-11-26 16:55:54,895 | INFO     | aborting loop
[2025-11-26 17:56:30] 2025-11-26 16:55:55,802 | INFO     | all data control threads have been joined
[2025-11-26 17:56:30] 2025-11-26 16:55:55,857 | INFO     | all payload control threads have been joined
[2025-11-26 17:56:30] 2025-11-26 16:55:55,899 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:55,900 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:55,900 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:55,952 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:56,333 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:56,396 | INFO     | all job control threads have been joined
[2025-11-26 17:56:30] 2025-11-26 16:55:56,490 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:56,808 | INFO     | [data] control thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:56,862 | INFO     | [payload] control thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:56,881 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:56,899 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:57,219 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:57,298 | INFO     | [job] validate thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:57,378 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:57,401 | INFO     | [job] control thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:55:58,900 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:56:05,514 | INFO     | job.realtimelogging is not enabled
[2025-11-26 17:56:30] 2025-11-26 16:56:06,519 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:56:30] 2025-11-26 16:56:22,965 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:56:30] 2025-11-26 16:56:25,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458067040064)>', '<ExcThread(monitor, started 140457224951552)>']
[2025-11-26 17:56:30] 2025-11-26 16:56:25,372 | INFO     | PID=1261759 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:56:30] 2025-11-26 16:56:25,373 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:56:30] 2025-11-26 16:56:25,373 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:56:30] 2025-11-26 16:56:25,373 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:56:30] 2025-11-26 16:56:25,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:56:30] 2025-11-26 16:56:25,373 | INFO     | [monitor] control thread has ended
[2025-11-26 17:56:30] 2025-11-26 16:56:30,063 | INFO     | all workflow threads have been joined
[2025-11-26 17:56:30] 2025-11-26 16:56:30,064 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:56:30] 2025-11-26 16:56:30,064 | INFO     | traces error code: 0
[2025-11-26 17:56:30] 2025-11-26 16:56:30,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:56:30] 2025-11-26 16:56:30,135 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:56:30] 2025-11-26 16:56:30,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:56:30] 2025-11-26 16:56:30,137 [wrapper] pilotpid: 1261759
[2025-11-26 17:56:30] 2025-11-26 16:56:30,138 [wrapper] Pilot exit status: 0
[2025-11-26 17:56:30] 2025-11-26 16:56:30,144 [wrapper] pandaids: 6896242987
[2025-11-26 17:56:30] 2025-11-26 16:56:30,153 [wrapper] cleanup supervisor_pilot 1336915 1261760
[2025-11-26 17:56:30] 2025-11-26 16:56:30,154 [wrapper] Test setup, not cleaning
[2025-11-26 17:56:30] 2025-11-26 16:56:30,155 [wrapper] apfmon messages muted
[2025-11-26 17:56:30] 2025-11-26 16:56:30,156 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:56:30] 2025-11-26 16:56:30,157 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:56:30]  *** Error codes and diagnostics ***
[2025-11-26 17:56:30]     "exeErrorCode": 0,
[2025-11-26 17:56:30]     "exeErrorDiag": "",
[2025-11-26 17:56:30]     "pilotErrorCode": 0,
[2025-11-26 17:56:30]     "pilotErrorDiag": "",
[2025-11-26 17:56:30]  *** Listing of results directory ***
[2025-11-26 17:56:30] total 1310396
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc    576529 Nov 24 22:08 pilot3.tar.gz
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc      5112 Nov 24 22:26 queuedata.json
[2025-11-26 17:56:30] -rwx------. 1 boinc boinc     36292 Nov 24 22:28 runpilot2-wrapper.sh
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc       100 Nov 26 10:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:56:30] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 10:12 run_atlas
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc       105 Nov 26 10:12 job.xml
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc      6277 Nov 26 10:12 init_data.xml
[2025-11-26 17:56:30] -rw-r--r--. 2 boinc boinc 409467748 Nov 26 10:12 EVNT.47483658._003060.pool.root.1
[2025-11-26 17:56:30] -rw-r--r--. 2 boinc boinc     15847 Nov 26 10:12 start_atlas.sh
[2025-11-26 17:56:30] drwxrwx--x. 2 boinc boinc        68 Nov 26 10:12 shared
[2025-11-26 17:56:30] -rw-r--r--. 2 boinc boinc    590099 Nov 26 10:12 input.tar.gz
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc         0 Nov 26 10:12 boinc_lockfile
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc      2785 Nov 26 10:12 pandaJob.out
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc    991877 Nov 26 10:12 agis_schedconf.cvmfs.json
[2025-11-26 17:56:30] drwx------. 5 boinc boinc      4096 Nov 26 10:12 pilot3
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc       532 Nov 26 17:50 boinc_task_state.xml
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc 917210222 Nov 26 17:55 HITS.47556173._000427.pool.root.1
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc      1037 Nov 26 17:55 memory_monitor_summary.json
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc   1516240 Nov 26 17:55 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc   1715861 Nov 26 17:55 log.47556173._000427.job.log.tgz.1
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc      8605 Nov 26 17:55 heartbeat.json
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc        29 Nov 26 17:56 wrapper_checkpoint.txt
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc      8192 Nov 26 17:56 boinc_mmap_file
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc        95 Nov 26 17:56 pilot_heartbeat.json
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc      4822 Nov 26 17:56 pilotlog.txt
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc   3917304 Nov 26 17:56 log.47556173._000427.job.log.1
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc       353 Nov 26 17:56 output.list
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc       620 Nov 26 17:56 runtime_log
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc   5652480 Nov 26 17:56 result.tar.gz
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc      8847 Nov 26 17:56 runtime_log.err
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc       660 Nov 26 17:56 5bpLDmzHth8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmevLKDmoW1vjn.diag
[2025-11-26 17:56:30] -rw-r--r--. 1 boinc boinc     21505 Nov 26 17:56 stderr.txt
[2025-11-26 17:56:30] HITS file was successfully produced:
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc 917210222 Nov 26 17:55 shared/HITS.pool.root.1
[2025-11-26 17:56:30]  *** Contents of shared directory: ***
[2025-11-26 17:56:30] total 1301704
[2025-11-26 17:56:30] -rw-r--r--. 2 boinc boinc 409467748 Nov 26 10:12 ATLAS.root_0
[2025-11-26 17:56:30] -rw-r--r--. 2 boinc boinc     15847 Nov 26 10:12 start_atlas.sh
[2025-11-26 17:56:30] -rw-r--r--. 2 boinc boinc    590099 Nov 26 10:12 input.tar.gz
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc 917210222 Nov 26 17:55 HITS.pool.root.1
[2025-11-26 17:56:30] -rw-------. 1 boinc boinc   5652480 Nov 26 17:56 result.tar.gz
17:56:32 (1258006): run_atlas exited; CPU time 216582.351899
17:56:32 (1258006): called boinc_finish(0)

</stderr_txt>
]]>

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