Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:42:17 (1989896): wrapper (7.7.26015): starting
10:42:17 (1989896): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 10:42:17] Arguments: --nthreads 3
[2025-11-27 10:42:17] Threads: 3
[2025-11-27 10:42:17] Checking for CVMFS
[2025-11-27 10:42:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 10:42:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 10:42:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 10:42:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 10:42:18] 2.9.2.0 317284 12345 97304 153358 2 81 35422419 36864000 0 130560 0 4656684 99.938 609882 3677 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 10:42:18] CVMFS is ok
[2025-11-27 10:42:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 10:42:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 10:42:18] Further information can be found at the LHC@home message board.
[2025-11-27 10:42:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 10:42:18] Checking for apptainer binary...
[2025-11-27 10:42:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 10:42:18] Running /usr/bin/apptainer --version
[2025-11-27 10:42:18] apptainer version 1.4.1-1.1
[2025-11-27 10:42:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 10:42:18] thA337a
[2025-11-27 10:42:18] apptainer works
[2025-11-27 10:42:18] Set ATHENA_PROC_NUMBER=3
[2025-11-27 10:42:18] Set ATHENA_CORE_NUMBER=3
[2025-11-27 10:42:18] Starting ATLAS job with PandaID=6893859976
[2025-11-27 10:42:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:34:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:34:04] 2025-11-27 17:33:34,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:34:04] 2025-11-27 17:33:34,723 | INFO     | ***************************************
[2025-11-27 18:34:04] 2025-11-27 17:33:34,723 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:34:04] 2025-11-27 17:33:34,723 | INFO     | ***************************************
[2025-11-27 18:34:04] 2025-11-27 17:33:34,723 | INFO     | 
[2025-11-27 18:34:04] 2025-11-27 17:33:34,724 | INFO     | architecture information:
[2025-11-27 18:34:04] 2025-11-27 17:33:34,724 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:34:04] 2025-11-27 17:33:34,732 | INFO     | cat /etc/os-release:
[2025-11-27 18:34:04] NAME="CentOS Linux"
[2025-11-27 18:34:04] VERSION="7 (Core)"
[2025-11-27 18:34:04] ID="centos"
[2025-11-27 18:34:04] ID_LIKE="rhel fedora"
[2025-11-27 18:34:04] VERSION_ID="7"
[2025-11-27 18:34:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:34:04] ANSI_COLOR="0;31"
[2025-11-27 18:34:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:34:04] HOME_URL="https://www.centos.org/"
[2025-11-27 18:34:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:34:04] 
[2025-11-27 18:34:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:34:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:34:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:34:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:34:04] 
[2025-11-27 18:34:04] 2025-11-27 17:33:34,732 | INFO     | ***************************************
[2025-11-27 18:34:04] 2025-11-27 17:33:35,236 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 18:34:04] 2025-11-27 17:33:35,248 | INFO     | sufficient remaining disk space (366375600128 B)
[2025-11-27 18:34:04] 2025-11-27 17:33:35,248 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:34:04] 2025-11-27 17:33:35,248 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:34:04] 2025-11-27 17:33:35,248 | INFO     | update_server=False
[2025-11-27 18:34:04] 2025-11-27 17:33:35,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:34:04] 2025-11-27 17:33:35,248 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 18:34:04] 2025-11-27 17:33:35,248 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:34:04] 2025-11-27 17:33:35,248 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:34:04] 2025-11-27 17:33:35,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:34:04] 2025-11-27 17:33:35,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:34:04] 2025-11-27 17:33:35,381 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 18:34:04] 2025-11-27 17:33:35,382 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 18:34:04] 2025-11-27 17:33:35,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:34:04] 2025-11-27 17:33:35,382 | INFO     | will abort loop
[2025-11-27 18:34:04] 2025-11-27 17:33:35,758 | INFO     | all data control threads have been joined
[2025-11-27 18:34:04] 2025-11-27 17:33:35,992 | INFO     | all payload control threads have been joined
[2025-11-27 18:34:04] 2025-11-27 17:33:36,254 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:36,254 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:36,279 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:36,387 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:36,391 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:34:04] 2025-11-27 17:33:36,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:34:04] 2025-11-27 17:33:36,596 | INFO     | all job control threads have been joined
[2025-11-27 18:34:04] 2025-11-27 17:33:36,763 | INFO     | [data] control thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:36,855 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:36,983 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:36,998 | INFO     | [payload] control thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:37,178 | INFO     | [job] validate thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:37,260 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:37,327 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:37,330 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:37,602 | INFO     | [job] control thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:38,514 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:40,398 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:45,907 | INFO     | job.realtimelogging is not enabled
[2025-11-27 18:34:04] 2025-11-27 17:33:46,913 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:34:04] 2025-11-27 17:33:58,797 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:34:04] 2025-11-27 17:33:59,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436023924544)>', '<ExcThread(monitor, started 140435540395776)>']
[2025-11-27 18:34:04] 2025-11-27 17:34:00,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:34:04] 2025-11-27 17:34:00,378 | INFO     | [monitor] control thread has ended
[2025-11-27 18:34:04] 2025-11-27 17:34:04,505 | INFO     | all workflow threads have been joined
[2025-11-27 18:34:04] 2025-11-27 17:34:04,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:34:04] 2025-11-27 17:34:04,505 | INFO     | traces error code: 0
[2025-11-27 18:34:04] 2025-11-27 17:34:04,505 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:34:04] 2025-11-27 17:34:04,556 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:34:04] 2025-11-27 17:34:04,559 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:34:04] 2025-11-27 17:34:04,561 [wrapper] pilotpid: 1993613
[2025-11-27 18:34:04] 2025-11-27 17:34:04,563 [wrapper] Pilot exit status: 0
[2025-11-27 18:34:04] 2025-11-27 17:34:04,570 [wrapper] pandaids: 6893859976
[2025-11-27 18:34:04] 2025-11-27 17:34:04,586 [wrapper] cleanup supervisor_pilot 2049386 1993614
[2025-11-27 18:34:04] 2025-11-27 17:34:04,588 [wrapper] Test setup, not cleaning
[2025-11-27 18:34:04] 2025-11-27 17:34:04,590 [wrapper] apfmon messages muted
[2025-11-27 18:34:04] 2025-11-27 17:34:04,593 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:34:04] 2025-11-27 17:34:04,595 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:34:04]  *** Error codes and diagnostics ***
[2025-11-27 18:34:04]     "exeErrorCode": 0,
[2025-11-27 18:34:04]     "exeErrorDiag": "",
[2025-11-27 18:34:04]     "pilotErrorCode": 0,
[2025-11-27 18:34:04]     "pilotErrorDiag": "",
[2025-11-27 18:34:04]  *** Listing of results directory ***
[2025-11-27 18:34:04] total 1315284
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:12 pilot3.tar.gz
[2025-11-27 18:34:04] -rwx------ 1 boinc boinc     36292 Nov 20 14:29 runpilot2-wrapper.sh
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:29 queuedata.json
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc       100 Nov 27 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:34:04] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 10:42 run_atlas
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc       105 Nov 27 10:42 job.xml
[2025-11-27 18:34:04] -rw-r--r-- 2 boinc boinc 409073866 Nov 27 10:42 EVNT.47493127._000536.pool.root.1
[2025-11-27 18:34:04] -rw-r--r-- 2 boinc boinc    590098 Nov 27 10:42 input.tar.gz
[2025-11-27 18:34:04] -rw-r--r-- 2 boinc boinc     15847 Nov 27 10:42 start_atlas.sh
[2025-11-27 18:34:04] drwxrwx--x 2 boinc boinc      4096 Nov 27 10:42 shared
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc         0 Nov 27 10:42 boinc_setup_complete
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc      6448 Nov 27 10:42 init_data.xml
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc         0 Nov 27 10:42 boinc_lockfile
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc      2783 Nov 27 10:42 pandaJob.out
[2025-11-27 18:34:04] -rw------- 1 boinc boinc    991551 Nov 27 10:42 agis_schedconf.cvmfs.json
[2025-11-27 18:34:04] drwx------ 5 boinc boinc      4096 Nov 27 10:42 pilot3
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc       531 Nov 27 18:30 boinc_task_state.xml
[2025-11-27 18:34:04] -rw------- 1 boinc boinc        95 Nov 27 18:32 pilot_heartbeat.json
[2025-11-27 18:34:04] -rw------- 1 boinc boinc 923593341 Nov 27 18:33 HITS.47523449._005351.pool.root.1
[2025-11-27 18:34:04] -rw------- 1 boinc boinc      1021 Nov 27 18:33 memory_monitor_summary.json
[2025-11-27 18:34:04] -rw------- 1 boinc boinc   1516240 Nov 27 18:33 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:34:04] -rw------- 1 boinc boinc   1154331 Nov 27 18:33 log.47523449._005351.job.log.tgz.1
[2025-11-27 18:34:04] -rw------- 1 boinc boinc      8555 Nov 27 18:33 heartbeat.json
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc      8192 Nov 27 18:34 boinc_mmap_file
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc        28 Nov 27 18:34 wrapper_checkpoint.txt
[2025-11-27 18:34:04] -rw------- 1 boinc boinc      4814 Nov 27 18:34 pilotlog.txt
[2025-11-27 18:34:04] -rw------- 1 boinc boinc   3981962 Nov 27 18:34 log.47523449._005351.job.log.1
[2025-11-27 18:34:04] -rw------- 1 boinc boinc       353 Nov 27 18:34 output.list
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc       620 Nov 27 18:34 runtime_log
[2025-11-27 18:34:04] -rw------- 1 boinc boinc   5160960 Nov 27 18:34 result.tar.gz
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc      8903 Nov 27 18:34 runtime_log.err
[2025-11-27 18:34:04] -rw------- 1 boinc boinc       666 Nov 27 18:34 QPSLDmCuJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4wHKDm7Zxlqn.diag
[2025-11-27 18:34:04] -rw-r--r-- 1 boinc boinc      9696 Nov 27 18:34 stderr.txt
[2025-11-27 18:34:04] HITS file was successfully produced:
[2025-11-27 18:34:04] -rw------- 1 boinc boinc 923593341 Nov 27 18:33 shared/HITS.pool.root.1
[2025-11-27 18:34:04]  *** Contents of shared directory: ***
[2025-11-27 18:34:04] total 1307080
[2025-11-27 18:34:04] -rw-r--r-- 2 boinc boinc 409073866 Nov 27 10:42 ATLAS.root_0
[2025-11-27 18:34:04] -rw-r--r-- 2 boinc boinc    590098 Nov 27 10:42 input.tar.gz
[2025-11-27 18:34:04] -rw-r--r-- 2 boinc boinc     15847 Nov 27 10:42 start_atlas.sh
[2025-11-27 18:34:04] -rw------- 1 boinc boinc 923593341 Nov 27 18:33 HITS.pool.root.1
[2025-11-27 18:34:04] -rw------- 1 boinc boinc   5160960 Nov 27 18:34 result.tar.gz
18:34:06 (1989896): run_atlas exited; CPU time 83483.728164
18:34:06 (1989896): called boinc_finish(0)

</stderr_txt>
]]>

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