Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:22:29 (1172328): wrapper (7.7.26015): starting
02:22:29 (1172328): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 02:22:29] Arguments: --nthreads 8
[2025-11-26 02:22:29] Threads: 8
[2025-11-26 02:22:29] Checking for CVMFS
[2025-11-26 02:22:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 02:22:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 02:22:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 02:22:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 02:22:29] 2.13.2.0 6818 6394 76816 153304 3 9 3748570 4097025 0 130560 0 2913091 99.983 226952 14778 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-26 02:22:29] CVMFS is ok
[2025-11-26 02:22:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 02:22:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 02:22:29] Further information can be found at the LHC@home message board.
[2025-11-26 02:22:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 02:22:29] Checking for apptainer binary...
[2025-11-26 02:22:29] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-26 02:22:29] apptainer is not installed, using version from CVMFS
[2025-11-26 02:22:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 02:22:30] pckeatlas02
[2025-11-26 02:22:30] apptainer works
[2025-11-26 02:22:30] Set ATHENA_PROC_NUMBER=8
[2025-11-26 02:22:30] Set ATHENA_CORE_NUMBER=8
[2025-11-26 02:22:30] Starting ATLAS job with PandaID=6895364447
[2025-11-26 02:22:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 10:12:26]  *** The last 200 lines of the pilot log: ***
[2025-11-26 10:12:26] 2025-11-26 09:11:24,688 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 10:12:26] 2025-11-26 09:11:26,282 | INFO     | time since job start (28132s) is within the limit (172800.0s)
[2025-11-26 10:12:26] 2025-11-26 09:11:26,825 | INFO     | monitor loop #2121: job 0:6895364447 is in state 'finished'
[2025-11-26 10:12:26] 2025-11-26 09:11:26,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:12:26] 2025-11-26 09:11:26,868 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 10:12:26] 2025-11-26 09:11:26,869 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3839.321
[2025-11-26 10:12:26] 2025-11-26 09:11:26,869 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6895364447/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 10:12:26] 2025-11-26 09:11:26,870 | INFO     | extracted standard info from prmon json
[2025-11-26 10:12:26] 2025-11-26 09:11:26,870 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 10:12:26] 2025-11-26 09:11:26,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 10:12:26] 2025-11-26 09:11:26,873 | INFO     | fitting pss+swap vs Time
[2025-11-26 10:12:26] 2025-11-26 09:11:26,873 | INFO     | sum of square deviations: 30379397510.0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,875 | INFO     | sum of deviations: 359795953458.99994
[2025-11-26 10:12:26] 2025-11-26 09:11:26,875 | INFO     | mean x: 1764134203.0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,875 | INFO     | mean y: 3039935.796095445
[2025-11-26 10:12:26] 2025-11-26 09:11:26,876 | INFO     | intersect: -20890341751.22005
[2025-11-26 10:12:26] 2025-11-26 09:11:26,876 | INFO     | chi2: 2.9026568014676757
[2025-11-26 10:12:26] 2025-11-26 09:11:26,876 | INFO     | sum of square deviations: 29401593130.0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,879 | INFO     | sum of deviations: 458953363277.5
[2025-11-26 10:12:26] 2025-11-26 09:11:26,879 | INFO     | mean x: 1764134050.5
[2025-11-26 10:12:26] 2025-11-26 09:11:26,879 | INFO     | mean y: 3055353.0416666665
[2025-11-26 10:12:26] 2025-11-26 09:11:26,879 | INFO     | intersect: -27534746839.15315
[2025-11-26 10:12:26] 2025-11-26 09:11:26,879 | INFO     | chi2: 1.3703581135671155
[2025-11-26 10:12:26] 2025-11-26 09:11:26,879 | INFO     | current chi2=1.3703581135671155 (change=52.78952327832147 %)
[2025-11-26 10:12:26] 2025-11-26 09:11:26,879 | INFO     | sum of square deviations: 28444998450.0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,881 | INFO     | sum of deviations: 447997295133.0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,882 | INFO     | mean x: 1764133898.0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,882 | INFO     | mean y: 3053606.5232815966
[2025-11-26 10:12:26] 2025-11-26 09:11:26,882 | INFO     | intersect: -27781346380.196903
[2025-11-26 10:12:26] 2025-11-26 09:11:26,882 | INFO     | chi2: 1.3695108626918213
[2025-11-26 10:12:26] 2025-11-26 09:11:26,882 | INFO     | current chi2=1.3695108626918213 (change=0.06182696821407488 %)
[2025-11-26 10:12:26] 2025-11-26 09:11:26,882 | INFO     | right removable region: 450
[2025-11-26 10:12:26] 2025-11-26 09:11:26,882 | INFO     | sum of square deviations: 29401593130.0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,884 | INFO     | sum of deviations: 274145727524.5002
[2025-11-26 10:12:26] 2025-11-26 09:11:26,884 | INFO     | mean x: 1764134355.5
[2025-11-26 10:12:26] 2025-11-26 09:11:26,884 | INFO     | mean y: 3053233.9451754387
[2025-11-26 10:12:26] 2025-11-26 09:11:26,884 | INFO     | intersect: -16446051894.51263
[2025-11-26 10:12:26] 2025-11-26 09:11:26,885 | INFO     | chi2: 1.619306800431826
[2025-11-26 10:12:26] 2025-11-26 09:11:26,885 | INFO     | current chi2=1.619306800431826 (change=44.21294313495647 %)
[2025-11-26 10:12:26] 2025-11-26 09:11:26,885 | INFO     | sum of square deviations: 28444998450.0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,887 | INFO     | sum of deviations: 254003178879.0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,887 | INFO     | mean x: 1764134508.0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,887 | INFO     | mean y: 3056442.7649667407
[2025-11-26 10:12:26] 2025-11-26 09:11:26,887 | INFO     | intersect: -15750003758.3032
[2025-11-26 10:12:26] 2025-11-26 09:11:26,887 | INFO     | chi2: 1.6064828702810696
[2025-11-26 10:12:26] 2025-11-26 09:11:26,887 | INFO     | current chi2=1.6064828702810696 (change=0.7919394982678172 %)
[2025-11-26 10:12:26] 2025-11-26 09:11:26,887 | INFO     | left removable region: 20
[2025-11-26 10:12:26] 2025-11-26 09:11:26,888 | INFO     | sum of square deviations: 24653662247.5
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | sum of deviations: 311532715639.0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | mean x: 1764134477.5
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | mean y: 3075502.004651163
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | intersect: -22289174590.928055
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | chi2: 0.06190008845942423
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | current memory leak: 12.64 B/s (using 430 data points, chi2=0.06)
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | could have reported an average CPU frequency of 3776 MHz (19 samples)
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | ..............................
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | . Timing measurements:
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | . get job = 0 s
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | . initial setup = 0 s
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | . payload setup = 3 s
[2025-11-26 10:12:26] 2025-11-26 09:11:26,890 | INFO     | . stage-in = 0 s
[2025-11-26 10:12:26] 2025-11-26 09:11:26,891 | INFO     | . payload execution = 28105 s
[2025-11-26 10:12:26] 2025-11-26 09:11:26,891 | INFO     | . stage-out = 0 s
[2025-11-26 10:12:26] 2025-11-26 09:11:26,891 | INFO     | . log creation = 0 s
[2025-11-26 10:12:26] 2025-11-26 09:11:26,891 | INFO     | ..............................
[2025-11-26 10:12:26] 2025-11-26 09:11:26,942 | INFO     | 
[2025-11-26 10:12:26] 2025-11-26 09:11:26,942 | INFO     | job summary report
[2025-11-26 10:12:26] 2025-11-26 09:11:26,942 | INFO     | --------------------------------------------------
[2025-11-26 10:12:26] 2025-11-26 09:11:26,942 | INFO     | PanDA job id: 6895364447
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | task id: 47556137
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | errors: (none)
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | pilot state: finished 
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | transexitcode: 0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | exeerrorcode: 0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | exeerrordiag: 
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | exitcode: 0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | exitmsg: OK
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | cpuconsumptiontime: 218884 s
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | nevents: 1000
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | neventsw: 0
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | pid: 1183408
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | pgrp: 1183408
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | corecount: 8
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | event service: False
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | sizes: {0: 2284315, 2: 2284577, 11: 2284605, 28113: 2323195, 28114: 2332191, 28116: 2332247, 28120: 2332621}
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | --------------------------------------------------
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | 
[2025-11-26 10:12:26] 2025-11-26 09:11:26,943 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,952 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 10:12:26] 2025-11-26 09:11:26,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,952 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 10:12:26] 2025-11-26 09:11:26,952 | INFO     | job 6895364447 has completed (purged errors)
[2025-11-26 10:12:26] 2025-11-26 09:11:26,952 | INFO     | overall cleanup function is called
[2025-11-26 10:12:26] 2025-11-26 09:11:27,960 | INFO     | --- collectZombieJob: --- 10, [1183408]
[2025-11-26 10:12:26] 2025-11-26 09:11:27,960 | INFO     | zombie collector waiting for pid 1183408
[2025-11-26 10:12:26] 2025-11-26 09:11:27,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 10:12:26] 2025-11-26 09:11:27,960 | INFO     | collected zombie processes
[2025-11-26 10:12:26] 2025-11-26 09:11:27,960 | INFO     | will attempt to kill all subprocesses of pid=1183408
[2025-11-26 10:12:26] 2025-11-26 09:11:27,990 | INFO     | process IDs to be killed: [1183408] (in reverse order)
[2025-11-26 10:12:26] 2025-11-26 09:11:28,006 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 10:12:26] 2025-11-26 09:11:28,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 10:12:26] 2025-11-26 09:11:28,007 | INFO     | did not find any defunct processes belonging to 1183408
[2025-11-26 10:12:26] 2025-11-26 09:11:28,008 | INFO     | did not find any defunct processes belonging to 1183408
[2025-11-26 10:12:26] 2025-11-26 09:11:28,008 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 10:12:26] 2025-11-26 09:11:28,008 | INFO     | ready for new job
[2025-11-26 10:12:26] 2025-11-26 09:11:28,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 10:12:26] 2025-11-26 09:11:28,009 | INFO     | ***************************************
[2025-11-26 10:12:26] 2025-11-26 09:11:28,010 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 10:12:26] 2025-11-26 09:11:28,010 | INFO     | ***************************************
[2025-11-26 10:12:26] 2025-11-26 09:11:28,010 | INFO     | 
[2025-11-26 10:12:26] 2025-11-26 09:11:28,010 | INFO     | architecture information:
[2025-11-26 10:12:26] 2025-11-26 09:11:28,010 | INFO     | executing command: cat /etc/os-release
[2025-11-26 10:12:26] 2025-11-26 09:11:28,016 | INFO     | cat /etc/os-release:
[2025-11-26 10:12:26] NAME="CentOS Linux"
[2025-11-26 10:12:26] VERSION="7 (Core)"
[2025-11-26 10:12:26] ID="centos"
[2025-11-26 10:12:26] ID_LIKE="rhel fedora"
[2025-11-26 10:12:26] VERSION_ID="7"
[2025-11-26 10:12:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 10:12:26] ANSI_COLOR="0;31"
[2025-11-26 10:12:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 10:12:26] HOME_URL="https://www.centos.org/"
[2025-11-26 10:12:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 10:12:26] 
[2025-11-26 10:12:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 10:12:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 10:12:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 10:12:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 10:12:26] 
[2025-11-26 10:12:26] 2025-11-26 09:11:28,016 | INFO     | ***************************************
[2025-11-26 10:12:26] 2025-11-26 09:11:28,519 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-11-26 10:12:26] 2025-11-26 09:11:28,526 | INFO     | sufficient remaining disk space (115426197504 B)
[2025-11-26 10:12:26] 2025-11-26 09:11:28,526 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 10:12:26] 2025-11-26 09:11:28,526 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 10:12:26] 2025-11-26 09:11:28,526 | INFO     | update_server=False
[2025-11-26 10:12:26] 2025-11-26 09:11:28,526 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 10:12:26] 2025-11-26 09:11:28,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:12:26] 2025-11-26 09:11:28,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:12:26] 2025-11-26 09:11:28,526 | INFO     | aborting loop
[2025-11-26 10:12:26] 2025-11-26 09:11:28,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 10:12:26] 2025-11-26 09:11:28,736 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 10:12:26] 2025-11-26 09:11:28,762 | INFO     | all payload control threads have been joined
[2025-11-26 10:12:26] 2025-11-26 09:11:28,869 | INFO     | all job control threads have been joined
[2025-11-26 10:12:26] 2025-11-26 09:11:29,070 | INFO     | all data control threads have been joined
[2025-11-26 10:12:26] 2025-11-26 09:11:29,531 | INFO     | [job] retrieve thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:29,531 | INFO     | [job] job monitor thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:29,532 | INFO     | [job] queue monitor thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:29,563 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:29,581 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:29,748 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:29,767 | INFO     | [payload] control thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:29,875 | INFO     | [job] control thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:30,011 | INFO     | [data] copytool_in thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:30,075 | INFO     | [data] control thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:30,385 | INFO     | [payload] validate_post thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:30,436 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:30,661 | INFO     | [payload] failed_post thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:30,741 | INFO     | [data] copytool_out thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:30,878 | INFO     | [job] validate thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:32,597 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 10:12:26] 2025-11-26 09:11:59,412 | INFO     | PID=1176093 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 10:12:26] 2025-11-26 09:11:59,412 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 10:12:26] 2025-11-26 09:11:59,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 10:12:26] 2025-11-26 09:11:59,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 10:12:26] 2025-11-26 09:12:20,701 | INFO     | [monitor] cgroup control has ended
[2025-11-26 10:12:26] 2025-11-26 09:12:21,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140656823043904)>', '<ExcThread(monitor, started 140656152409856)>']
[2025-11-26 10:12:26] 2025-11-26 09:12:21,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 10:12:26] 2025-11-26 09:12:21,524 | INFO     | [monitor] control thread has ended
[2025-11-26 10:12:26] 2025-11-26 09:12:26,191 | INFO     | all workflow threads have been joined
[2025-11-26 10:12:26] 2025-11-26 09:12:26,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 10:12:26] 2025-11-26 09:12:26,192 | INFO     | traces error code: 0
[2025-11-26 10:12:26] 2025-11-26 09:12:26,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 10:12:26] 2025-11-26 09:12:26,262 [wrapper] ==== pilot stdout END ====
[2025-11-26 10:12:26] 2025-11-26 09:12:26,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 10:12:26] 2025-11-26 09:12:26,264 [wrapper] pilotpid: 1176093
[2025-11-26 10:12:26] 2025-11-26 09:12:26,265 [wrapper] Pilot exit status: 0
[2025-11-26 10:12:26] 2025-11-26 09:12:26,270 [wrapper] pandaids: 6895364447
[2025-11-26 10:12:26] 2025-11-26 09:12:26,280 [wrapper] cleanup supervisor_pilot 1255217 1176094
[2025-11-26 10:12:26] 2025-11-26 09:12:26,282 [wrapper] Test setup, not cleaning
[2025-11-26 10:12:26] 2025-11-26 09:12:26,283 [wrapper] apfmon messages muted
[2025-11-26 10:12:26] 2025-11-26 09:12:26,284 [wrapper] ==== wrapper stdout END ====
[2025-11-26 10:12:26] 2025-11-26 09:12:26,285 [wrapper] ==== wrapper stderr END ====
[2025-11-26 10:12:26]  *** Error codes and diagnostics ***
[2025-11-26 10:12:26]     "exeErrorCode": 0,
[2025-11-26 10:12:26]     "exeErrorDiag": "",
[2025-11-26 10:12:26]     "pilotErrorCode": 0,
[2025-11-26 10:12:26]     "pilotErrorDiag": "",
[2025-11-26 10:12:26]  *** Listing of results directory ***
[2025-11-26 10:12:26] total 1329988
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc    576529 Nov 23 16:18 pilot3.tar.gz
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc      5112 Nov 23 16:49 queuedata.json
[2025-11-26 10:12:26] -rwx------. 1 boinc boinc     36292 Nov 23 16:51 runpilot2-wrapper.sh
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc       100 Nov 26 02:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 10:12:26] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 02:22 run_atlas
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc       105 Nov 26 02:22 job.xml
[2025-11-26 10:12:26] -rw-r--r--. 2 boinc boinc 411438865 Nov 26 02:22 EVNT.47483658._000805.pool.root.1
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc      6277 Nov 26 02:22 init_data.xml
[2025-11-26 10:12:26] drwxrwx--x. 2 boinc boinc        68 Nov 26 02:22 shared
[2025-11-26 10:12:26] -rw-r--r--. 2 boinc boinc    590100 Nov 26 02:22 input.tar.gz
[2025-11-26 10:12:26] -rw-r--r--. 2 boinc boinc     15847 Nov 26 02:22 start_atlas.sh
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc         0 Nov 26 02:22 boinc_lockfile
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc      2785 Nov 26 02:22 pandaJob.out
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc    991877 Nov 26 02:22 agis_schedconf.cvmfs.json
[2025-11-26 10:12:26] drwx------. 5 boinc boinc      4096 Nov 26 02:22 pilot3
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc       532 Nov 26 10:05 boinc_task_state.xml
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc 935214785 Nov 26 10:10 HITS.47556137._007920.pool.root.1
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc      1025 Nov 26 10:11 memory_monitor_summary.json
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc   1516240 Nov 26 10:11 agis_ddmendpoints.agis.ALL.json
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc   1717455 Nov 26 10:11 log.47556137._007920.job.log.tgz.1
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc        95 Nov 26 10:11 pilot_heartbeat.json
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc      8604 Nov 26 10:11 heartbeat.json
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc        29 Nov 26 10:12 wrapper_checkpoint.txt
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc      8192 Nov 26 10:12 boinc_mmap_file
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc      4750 Nov 26 10:12 pilotlog.txt
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc   3956876 Nov 26 10:12 log.47556137._007920.job.log.1
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc       353 Nov 26 10:12 output.list
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc       620 Nov 26 10:12 runtime_log
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc   5693440 Nov 26 10:12 result.tar.gz
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc      8847 Nov 26 10:12 runtime_log.err
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc       658 Nov 26 10:12 77xMDmMYRh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4cIKDmGu6fzn.diag
[2025-11-26 10:12:26] -rw-r--r--. 1 boinc boinc     21457 Nov 26 10:12 stderr.txt
[2025-11-26 10:12:26] HITS file was successfully produced:
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc 935214785 Nov 26 10:10 shared/HITS.pool.root.1
[2025-11-26 10:12:26]  *** Contents of shared directory: ***
[2025-11-26 10:12:26] total 1321248
[2025-11-26 10:12:26] -rw-r--r--. 2 boinc boinc 411438865 Nov 26 02:22 ATLAS.root_0
[2025-11-26 10:12:26] -rw-r--r--. 2 boinc boinc    590100 Nov 26 02:22 input.tar.gz
[2025-11-26 10:12:26] -rw-r--r--. 2 boinc boinc     15847 Nov 26 02:22 start_atlas.sh
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc 935214785 Nov 26 10:10 HITS.pool.root.1
[2025-11-26 10:12:26] -rw-------. 1 boinc boinc   5693440 Nov 26 10:12 result.tar.gz
10:12:27 (1172328): run_atlas exited; CPU time 218931.225030
10:12:27 (1172328): called boinc_finish(0)

</stderr_txt>
]]>

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