Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:43:08 (22992): wrapper (7.7.26015): starting
15:43:08 (22992): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 15:43:08] Arguments: --nthreads 8
[2025-11-24 15:43:08] Threads: 8
[2025-11-24 15:43:08] Checking for CVMFS
[2025-11-24 15:43:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 15:43:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 15:43:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 15:43:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 15:43:09] 2.11.2.0 24877 115298 141884 153258 0 90 16776757 18432000 1885 130560 0 83458168 99.974 4780972 31882 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 15:43:09] CVMFS is ok
[2025-11-24 15:43:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 15:43:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 15:43:09] Further information can be found at the LHC@home message board.
[2025-11-24 15:43:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 15:43:09] Checking for apptainer binary...
[2025-11-24 15:43:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 15:43:09] Running /usr/bin/apptainer --version
[2025-11-24 15:43:09] apptainer version 1.3.2-1.el7
[2025-11-24 15:43:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 15:43:10] c-206-3.aglt2.org
[2025-11-24 15:43:10] apptainer works
[2025-11-24 15:43:10] Set ATHENA_PROC_NUMBER=8
[2025-11-24 15:43:10] Set ATHENA_CORE_NUMBER=8
[2025-11-24 15:43:10] Starting ATLAS job with PandaID=6895373298
[2025-11-24 15:43:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:10:27]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:10:28] 2025-11-25 16:09:54,350 | INFO     | time since job start (69993s) is within the limit (172800.0s)
[2025-11-25 11:10:28] 2025-11-25 16:09:54,719 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 11:10:28] 2025-11-25 16:09:54,725 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2455.75
[2025-11-25 11:10:28] 2025-11-25 16:09:54,728 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895373298/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 11:10:28] 2025-11-25 16:09:54,729 | INFO     | extracted standard info from prmon json
[2025-11-25 11:10:28] 2025-11-25 16:09:54,729 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 11:10:28] 2025-11-25 16:09:54,729 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 11:10:28] 2025-11-25 16:09:54,745 | INFO     | fitting pss+swap vs Time
[2025-11-25 11:10:28] 2025-11-25 16:09:54,746 | INFO     | sum of square deviations: 467913660062.6998
[2025-11-25 11:10:28] 2025-11-25 16:09:54,781 | INFO     | sum of deviations: 2245519696204.1523
[2025-11-25 11:10:28] 2025-11-25 16:09:54,781 | INFO     | mean x: 1764051981.5422843
[2025-11-25 11:10:28] 2025-11-25 16:09:54,782 | INFO     | mean y: 2866355.0174367917
[2025-11-25 11:10:28] 2025-11-25 16:09:54,782 | INFO     | intersect: -8462826801.173741
[2025-11-25 11:10:28] 2025-11-25 16:09:54,783 | INFO     | chi2: 5.800776889641211
[2025-11-25 11:10:28] 2025-11-25 16:09:54,785 | INFO     | sum of square deviations: 461821261118.723
[2025-11-25 11:10:28] 2025-11-25 16:09:54,821 | INFO     | sum of deviations: 2600080252269.77
[2025-11-25 11:10:28] 2025-11-25 16:09:54,821 | INFO     | mean x: 1764051829.0446584
[2025-11-25 11:10:28] 2025-11-25 16:09:54,822 | INFO     | mean y: 2875227.847635727
[2025-11-25 11:10:28] 2025-11-25 16:09:54,822 | INFO     | intersect: -9928837992.909132
[2025-11-25 11:10:28] 2025-11-25 16:09:54,823 | INFO     | chi2: 3.009962636867999
[2025-11-25 11:10:28] 2025-11-25 16:09:54,824 | INFO     | current chi2=3.009962636867999 (change=48.11104281147123 %)
[2025-11-25 11:10:28] 2025-11-25 16:09:54,825 | INFO     | sum of square deviations: 455781979449.7327
[2025-11-25 11:10:28] 2025-11-25 16:09:54,870 | INFO     | sum of deviations: 2715121036923.554
[2025-11-25 11:10:28] 2025-11-25 16:09:54,870 | INFO     | mean x: 1764051676.5470536
[2025-11-25 11:10:28] 2025-11-25 16:09:54,871 | INFO     | mean y: 2878130.4942832016
[2025-11-25 11:10:28] 2025-11-25 16:09:54,871 | INFO     | intersect: -10505685246.661806
[2025-11-25 11:10:28] 2025-11-25 16:09:54,872 | INFO     | chi2: 2.593046292690099
[2025-11-25 11:10:28] 2025-11-25 16:09:54,873 | INFO     | current chi2=2.593046292690099 (change=13.851213269933481 %)
[2025-11-25 11:10:28] 2025-11-25 16:09:54,873 | INFO     | right removable region: 1136
[2025-11-25 11:10:28] 2025-11-25 16:09:54,874 | INFO     | sum of square deviations: 461820881698.7232
[2025-11-25 11:10:28] 2025-11-25 16:09:54,920 | INFO     | sum of deviations: 1936545279140.4934
[2025-11-25 11:10:28] 2025-11-25 16:09:54,920 | INFO     | mean x: 1764052134.0446584
[2025-11-25 11:10:28] 2025-11-25 16:09:54,920 | INFO     | mean y: 2874080.5
[2025-11-25 11:10:28] 2025-11-25 16:09:54,920 | INFO     | intersect: -7394294319.023543
[2025-11-25 11:10:28] 2025-11-25 16:09:54,922 | INFO     | chi2: 3.6511020044589486
[2025-11-25 11:10:28] 2025-11-25 16:09:54,922 | INFO     | current chi2=3.6511020044589486 (change=37.05839624725205 %)
[2025-11-25 11:10:28] 2025-11-25 16:09:54,924 | INFO     | sum of square deviations: 455781429718.0069
[2025-11-25 11:10:28] 2025-11-25 16:09:54,969 | INFO     | sum of deviations: 1845205474103.2957
[2025-11-25 11:10:28] 2025-11-25 16:09:54,969 | INFO     | mean x: 1764052286.5444152
[2025-11-25 11:10:28] 2025-11-25 16:09:54,969 | INFO     | mean y: 2876386.558487247
[2025-11-25 11:10:28] 2025-11-25 16:09:54,970 | INFO     | intersect: -7138790042.7870245
[2025-11-25 11:10:28] 2025-11-25 16:09:54,971 | INFO     | chi2: 3.56094872243081
[2025-11-25 11:10:28] 2025-11-25 16:09:54,971 | INFO     | current chi2=3.56094872243081 (change=2.4692074315655343 %)
[2025-11-25 11:10:28] 2025-11-25 16:09:54,972 | INFO     | left removable region: 20
[2025-11-25 11:10:28] 2025-11-25 16:09:54,973 | INFO     | sum of square deviations: 430990960843.38745
[2025-11-25 11:10:28] 2025-11-25 16:09:55,016 | INFO     | sum of deviations: 2185461763669.853
[2025-11-25 11:10:28] 2025-11-25 16:09:55,017 | INFO     | mean x: 1764052256.048387
[2025-11-25 11:10:28] 2025-11-25 16:09:55,017 | INFO     | mean y: 2892136.9471326163
[2025-11-25 11:10:28] 2025-11-25 16:09:55,017 | INFO     | intersect: -8942234570.965914
[2025-11-25 11:10:28] 2025-11-25 16:09:55,019 | INFO     | chi2: 0.25331285037579715
[2025-11-25 11:10:28] 2025-11-25 16:09:55,019 | INFO     | current memory leak: 5.07 B/s (using 1116 data points, chi2=0.25)
[2025-11-25 11:10:28] 2025-11-25 16:09:55,020 | INFO     | could have reported an average CPU frequency of 2625 MHz (42 samples)
[2025-11-25 11:10:28] 2025-11-25 16:09:55,021 | INFO     | ..............................
[2025-11-25 11:10:28] 2025-11-25 16:09:55,021 | INFO     | . Timing measurements:
[2025-11-25 11:10:28] 2025-11-25 16:09:55,021 | INFO     | . get job = 0 s
[2025-11-25 11:10:28] 2025-11-25 16:09:55,021 | INFO     | . initial setup = 2 s
[2025-11-25 11:10:28] 2025-11-25 16:09:55,021 | INFO     | . payload setup = 5 s
[2025-11-25 11:10:28] 2025-11-25 16:09:55,021 | INFO     | . stage-in = 0 s
[2025-11-25 11:10:28] 2025-11-25 16:09:55,022 | INFO     | . payload execution = 69957 s
[2025-11-25 11:10:28] 2025-11-25 16:09:55,022 | INFO     | . stage-out = 4 s
[2025-11-25 11:10:28] 2025-11-25 16:09:55,022 | INFO     | . log creation = 0 s
[2025-11-25 11:10:28] 2025-11-25 16:09:55,022 | INFO     | ..............................
[2025-11-25 11:10:28] 2025-11-25 16:09:55,180 | INFO     | 
[2025-11-25 11:10:28] 2025-11-25 16:09:55,180 | INFO     | job summary report
[2025-11-25 11:10:28] 2025-11-25 16:09:55,180 | INFO     | --------------------------------------------------
[2025-11-25 11:10:28] 2025-11-25 16:09:55,181 | INFO     | PanDA job id: 6895373298
[2025-11-25 11:10:28] 2025-11-25 16:09:55,181 | INFO     | task id: 47556137
[2025-11-25 11:10:28] 2025-11-25 16:09:55,181 | INFO     | errors: (none)
[2025-11-25 11:10:28] 2025-11-25 16:09:55,181 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 11:10:28] 2025-11-25 16:09:55,181 | INFO     | pilot state: finished 
[2025-11-25 11:10:28] 2025-11-25 16:09:55,181 | INFO     | transexitcode: 0
[2025-11-25 11:10:28] 2025-11-25 16:09:55,182 | INFO     | exeerrorcode: 0
[2025-11-25 11:10:28] 2025-11-25 16:09:55,182 | INFO     | exeerrordiag: 
[2025-11-25 11:10:28] 2025-11-25 16:09:55,182 | INFO     | exitcode: 0
[2025-11-25 11:10:28] 2025-11-25 16:09:55,182 | INFO     | exitmsg: OK
[2025-11-25 11:10:28] 2025-11-25 16:09:55,182 | INFO     | cpuconsumptiontime: 537463 s
[2025-11-25 11:10:28] 2025-11-25 16:09:55,182 | INFO     | nevents: 1000
[2025-11-25 11:10:28] 2025-11-25 16:09:55,183 | INFO     | neventsw: 0
[2025-11-25 11:10:28] 2025-11-25 16:09:55,183 | INFO     | pid: 1527
[2025-11-25 11:10:28] 2025-11-25 16:09:55,183 | INFO     | pgrp: 1527
[2025-11-25 11:10:28] 2025-11-25 16:09:55,183 | INFO     | corecount: 8
[2025-11-25 11:10:28] 2025-11-25 16:09:55,183 | INFO     | event service: False
[2025-11-25 11:10:28] 2025-11-25 16:09:55,183 | INFO     | sizes: {0: 2284303, 1: 2284303, 4: 2284593, 12: 2284621, 69967: 2339842, 69972: 2348841, 69973: 2349025, 69978: 2349271}
[2025-11-25 11:10:28] 2025-11-25 16:09:55,184 | INFO     | --------------------------------------------------
[2025-11-25 11:10:28] 2025-11-25 16:09:55,184 | INFO     | 
[2025-11-25 11:10:28] 2025-11-25 16:09:55,184 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 11:10:28] 2025-11-25 16:09:55,208 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,208 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,208 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,208 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,209 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,209 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,209 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,209 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,211 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 11:10:28] 2025-11-25 16:09:55,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,211 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 11:10:28] 2025-11-25 16:09:55,212 | INFO     | job 6895373298 has completed (purged errors)
[2025-11-25 11:10:28] 2025-11-25 16:09:55,212 | INFO     | overall cleanup function is called
[2025-11-25 11:10:28] 2025-11-25 16:09:55,513 | INFO     | PID=27377 has CPU usage=17.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 11:10:28] 2025-11-25 16:09:55,514 | INFO     | .. there are 3 such processes running
[2025-11-25 11:10:28] 2025-11-25 16:09:56,229 | INFO     | --- collectZombieJob: --- 10, [1527]
[2025-11-25 11:10:28] 2025-11-25 16:09:56,229 | INFO     | zombie collector waiting for pid 1527
[2025-11-25 11:10:28] 2025-11-25 16:09:56,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 11:10:28] 2025-11-25 16:09:56,229 | INFO     | collected zombie processes
[2025-11-25 11:10:28] 2025-11-25 16:09:56,229 | INFO     | will attempt to kill all subprocesses of pid=1527
[2025-11-25 11:10:28] 2025-11-25 16:09:56,400 | INFO     | process IDs to be killed: [1527] (in reverse order)
[2025-11-25 11:10:28] 2025-11-25 16:09:56,460 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 11:10:28] 2025-11-25 16:09:56,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 11:10:28] 2025-11-25 16:09:56,466 | INFO     | did not find any defunct processes belonging to 1527
[2025-11-25 11:10:28] 2025-11-25 16:09:56,472 | INFO     | did not find any defunct processes belonging to 1527
[2025-11-25 11:10:28] 2025-11-25 16:09:56,473 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 11:10:28] 2025-11-25 16:09:56,474 | INFO     | ready for new job
[2025-11-25 11:10:28] 2025-11-25 16:09:56,474 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 11:10:28] 2025-11-25 16:09:56,479 | INFO     | ***************************************
[2025-11-25 11:10:28] 2025-11-25 16:09:56,479 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 11:10:28] 2025-11-25 16:09:56,479 | INFO     | ***************************************
[2025-11-25 11:10:28] 2025-11-25 16:09:56,479 | INFO     | 
[2025-11-25 11:10:28] 2025-11-25 16:09:56,481 | INFO     | architecture information:
[2025-11-25 11:10:28] 2025-11-25 16:09:56,481 | INFO     | executing command: cat /etc/os-release
[2025-11-25 11:10:28] 2025-11-25 16:09:56,495 | INFO     | cat /etc/os-release:
[2025-11-25 11:10:28] NAME="CentOS Linux"
[2025-11-25 11:10:28] VERSION="7 (Core)"
[2025-11-25 11:10:28] ID="centos"
[2025-11-25 11:10:28] ID_LIKE="rhel fedora"
[2025-11-25 11:10:28] VERSION_ID="7"
[2025-11-25 11:10:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 11:10:28] ANSI_COLOR="0;31"
[2025-11-25 11:10:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 11:10:28] HOME_URL="https://www.centos.org/"
[2025-11-25 11:10:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 11:10:28] 
[2025-11-25 11:10:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 11:10:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 11:10:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 11:10:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 11:10:28] 
[2025-11-25 11:10:28] 2025-11-25 16:09:56,496 | INFO     | ***************************************
[2025-11-25 11:10:28] 2025-11-25 16:09:56,999 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 11:10:28] 2025-11-25 16:09:57,033 | INFO     | sufficient remaining disk space (26455572480 B)
[2025-11-25 11:10:28] 2025-11-25 16:09:57,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 11:10:28] 2025-11-25 16:09:57,033 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 11:10:28] 2025-11-25 16:09:57,033 | INFO     | update_server=False
[2025-11-25 11:10:28] 2025-11-25 16:09:57,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 11:10:28] 2025-11-25 16:09:57,034 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:10:28] 2025-11-25 16:09:57,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:10:28] 2025-11-25 16:09:57,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 11:10:28] 2025-11-25 16:09:57,034 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:10:28] 2025-11-25 16:09:57,035 | INFO     | aborting loop
[2025-11-25 11:10:28] 2025-11-25 16:09:57,082 | INFO     | all data control threads have been joined
[2025-11-25 11:10:28] 2025-11-25 16:09:57,384 | INFO     | all payload control threads have been joined
[2025-11-25 11:10:28] 2025-11-25 16:09:58,039 | INFO     | [job] retrieve thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:58,040 | INFO     | [job] queue monitor thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:58,040 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:58,088 | INFO     | [data] control thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:58,113 | INFO     | all job control threads have been joined
[2025-11-25 11:10:28] 2025-11-25 16:09:58,138 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:58,186 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:58,321 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:58,389 | INFO     | [payload] control thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:58,599 | INFO     | [data] copytool_in thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:58,626 | INFO     | [job] validate thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:59,041 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:59,076 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:59,119 | INFO     | [job] control thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:59,373 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:09:59,436 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:10:01,041 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:10:28] 2025-11-25 16:10:16,345 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:10:28] 2025-11-25 16:10:17,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652699322176)>', '<ExcThread(monitor, started 140652117485312)>']
[2025-11-25 11:10:28] 2025-11-25 16:10:22,922 | INFO     | all workflow threads have been joined
[2025-11-25 11:10:28] 2025-11-25 16:10:22,922 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:10:28] 2025-11-25 16:10:22,923 | INFO     | traces error code: 0
[2025-11-25 11:10:28] 2025-11-25 16:10:22,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:10:28] 2025-11-25 16:10:27,678 | INFO     | PID=27377 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 11:10:28] 2025-11-25 16:10:27,678 | INFO     | .. there are 3 such processes running
[2025-11-25 11:10:28] 2025-11-25 16:10:27,679 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:10:28] 2025-11-25 16:10:27,679 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:10:28] 2025-11-25 16:10:27,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:10:28] 2025-11-25 16:10:27,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:10:28] 2025-11-25 16:10:27,679 | INFO     | [monitor] control thread has ended
[2025-11-25 11:10:28] 2025-11-25 16:10:27,781 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:10:28] 2025-11-25 16:10:27,784 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:10:28] 2025-11-25 16:10:27,787 [wrapper] pilotpid: 27377
[2025-11-25 11:10:28] 2025-11-25 16:10:27,789 [wrapper] Pilot exit status: 0
[2025-11-25 11:10:28] 2025-11-25 16:10:27,798 [wrapper] pandaids: 6895373298
[2025-11-25 11:10:28] 2025-11-25 16:10:27,838 [wrapper] cleanup supervisor_pilot 22246 27378
[2025-11-25 11:10:28] 2025-11-25 16:10:27,840 [wrapper] Test setup, not cleaning
[2025-11-25 11:10:28] 2025-11-25 16:10:27,843 [wrapper] apfmon messages muted
[2025-11-25 11:10:28] 2025-11-25 16:10:27,845 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:10:28] 2025-11-25 16:10:27,847 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:10:28]  *** Error codes and diagnostics ***
[2025-11-25 11:10:28]     "exeErrorCode": 0,
[2025-11-25 11:10:28]     "exeErrorDiag": "",
[2025-11-25 11:10:28]     "pilotErrorCode": 0,
[2025-11-25 11:10:28]     "pilotErrorDiag": "",
[2025-11-25 11:10:28]  *** Listing of results directory ***
[2025-11-25 11:10:28] total 1332940
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 17:35 queuedata.json
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 17:35 pilot3.tar.gz
[2025-11-25 11:10:28] -rwx------ 1 boincer umatlas     36292 Nov 23 17:36 runpilot2-wrapper.sh
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas       100 Nov 24 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:10:28] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 15:43 run_atlas
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas       105 Nov 24 15:43 job.xml
[2025-11-25 11:10:28] -rw-r--r-- 2 boincer umatlas 411758003 Nov 24 15:43 EVNT.47483658._000928.pool.root.1
[2025-11-25 11:10:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 15:43 start_atlas.sh
[2025-11-25 11:10:28] drwxrwx--x 2 boincer umatlas      4096 Nov 24 15:43 shared
[2025-11-25 11:10:28] -rw-r--r-- 2 boincer umatlas    590102 Nov 24 15:43 input.tar.gz
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas         0 Nov 24 15:43 boinc_lockfile
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas      2782 Nov 24 15:43 pandaJob.out
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas        57 Nov 24 15:43 setup.sh.local
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas    991801 Nov 24 15:43 agis_schedconf.cvmfs.json
[2025-11-25 11:10:28] drwx------ 5 boincer umatlas      4096 Nov 24 15:43 pilot3
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas       533 Nov 25 10:54 boinc_task_state.xml
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas      5953 Nov 25 11:04 init_data.xml
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas 925222002 Nov 25 11:09 HITS.47556137._009141.pool.root.1
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas      1067 Nov 25 11:09 memory_monitor_summary.json
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas   1516240 Nov 25 11:09 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas   2324174 Nov 25 11:09 log.47556137._009141.job.log.tgz.1
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas      7971 Nov 25 11:09 heartbeat.json
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 11:10 boinc_mmap_file
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas        29 Nov 25 11:10 wrapper_checkpoint.txt
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas        95 Nov 25 11:10 pilot_heartbeat.json
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas       820 Nov 25 11:10 pilotlog.txt
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas   9694490 Nov 25 11:10 log.47556137._009141.job.log.1
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas       353 Nov 25 11:10 output.list
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas       620 Nov 25 11:10 runtime_log
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas  12042240 Nov 25 11:10 result.tar.gz
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas      9338 Nov 25 11:10 runtime_log.err
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas       667 Nov 25 11:10 RDsKDmtrXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlFLKDm3KsC7m.diag
[2025-11-25 11:10:28] -rw-r--r-- 1 boincer umatlas     21339 Nov 25 11:10 stderr.txt
[2025-11-25 11:10:28] HITS file was successfully produced:
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas 925222002 Nov 25 11:09 shared/HITS.pool.root.1
[2025-11-25 11:10:28]  *** Contents of shared directory: ***
[2025-11-25 11:10:28] total 1318008
[2025-11-25 11:10:28] -rw-r--r-- 2 boincer umatlas 411758003 Nov 24 15:43 ATLAS.root_0
[2025-11-25 11:10:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 15:43 start_atlas.sh
[2025-11-25 11:10:28] -rw-r--r-- 2 boincer umatlas    590102 Nov 24 15:43 input.tar.gz
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas 925222002 Nov 25 11:09 HITS.pool.root.1
[2025-11-25 11:10:28] -rw------- 1 boincer umatlas  12042240 Nov 25 11:10 result.tar.gz
11:10:29 (22992): run_atlas exited; CPU time 536066.615549
11:10:29 (22992): called boinc_finish(0)

</stderr_txt>
]]>

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