Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:14:47 (21441): wrapper (7.7.26015): starting
12:14:47 (21441): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 12:14:47] Arguments: --nthreads 8
[2025-11-24 12:14:47] Threads: 8
[2025-11-24 12:14:47] Checking for CVMFS
[2025-11-24 12:14:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 12:14:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 12:14:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 12:14:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 12:14:47] 2.11.2.0 2951 21974 80556 153254 4 1 15058416 20275200 1 130560 0 3442090 99.620 1525738 30183 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 12:14:47] CVMFS is ok
[2025-11-24 12:14:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 12:14:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 12:14:47] Further information can be found at the LHC@home message board.
[2025-11-24 12:14:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 12:14:47] Checking for apptainer binary...
[2025-11-24 12:14:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 12:14:47] Running /usr/bin/apptainer --version
[2025-11-24 12:14:47] apptainer version 1.3.2-1.el7
[2025-11-24 12:14:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 12:14:49] c-204-23.aglt2.org
[2025-11-24 12:14:49] apptainer works
[2025-11-24 12:14:49] Set ATHENA_PROC_NUMBER=8
[2025-11-24 12:14:49] Set ATHENA_CORE_NUMBER=8
[2025-11-24 12:14:49] Starting ATLAS job with PandaID=6895365737
[2025-11-24 12:14:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:26:25]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:26:25] 2025-11-25 05:25:49,805 | INFO     | time since job start (43842s) is within the limit (172800.0s)
[2025-11-25 00:26:25] 2025-11-25 05:25:50,216 | INFO     | monitor loop #3226: job 0:6895365737 is in state 'finished'
[2025-11-25 00:26:25] 2025-11-25 05:25:50,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:26:25] 2025-11-25 05:25:50,661 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 00:26:25] 2025-11-25 05:25:50,666 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-25 00:26:25] 2025-11-25 05:25:50,669 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895365737/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:26:25] 2025-11-25 05:25:50,670 | INFO     | extracted standard info from prmon json
[2025-11-25 00:26:25] 2025-11-25 05:25:50,670 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:26:25] 2025-11-25 05:25:50,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:26:25] 2025-11-25 05:25:50,682 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:26:25] 2025-11-25 05:25:50,683 | INFO     | sum of square deviations: 114775788609.88689
[2025-11-25 00:26:25] 2025-11-25 05:25:50,694 | INFO     | sum of deviations: 649322035214.2893
[2025-11-25 00:26:25] 2025-11-25 05:25:50,694 | INFO     | mean x: 1764026408.1754875
[2025-11-25 00:26:25] 2025-11-25 05:25:50,694 | INFO     | mean y: 3264331.7437325907
[2025-11-25 00:26:25] 2025-11-25 05:25:50,694 | INFO     | intersect: -9976377118.78421
[2025-11-25 00:26:25] 2025-11-25 05:25:50,695 | INFO     | chi2: 6.477513661828285
[2025-11-25 00:26:25] 2025-11-25 05:25:50,696 | INFO     | sum of square deviations: 112394766305.09074
[2025-11-25 00:26:25] 2025-11-25 05:25:50,707 | INFO     | sum of deviations: 913016845711.1515
[2025-11-25 00:26:25] 2025-11-25 05:25:50,707 | INFO     | mean x: 1764026255.6802244
[2025-11-25 00:26:25] 2025-11-25 05:25:50,708 | INFO     | mean y: 3281215.0532959327
[2025-11-25 00:26:25] 2025-11-25 05:25:50,708 | INFO     | intersect: -14326440182.657932
[2025-11-25 00:26:25] 2025-11-25 05:25:50,708 | INFO     | chi2: 3.495642708598582
[2025-11-25 00:26:25] 2025-11-25 05:25:50,709 | INFO     | current chi2=3.495642708598582 (change=46.0341901060239 %)
[2025-11-25 00:26:25] 2025-11-25 05:25:50,709 | INFO     | sum of square deviations: 110046907412.76135
[2025-11-25 00:26:25] 2025-11-25 05:25:50,720 | INFO     | sum of deviations: 1038798418137.7128
[2025-11-25 00:26:25] 2025-11-25 05:25:50,720 | INFO     | mean x: 1764026103.1850283
[2025-11-25 00:26:25] 2025-11-25 05:25:50,720 | INFO     | mean y: 3289377.406779661
[2025-11-25 00:26:25] 2025-11-25 05:25:50,720 | INFO     | intersect: -16648405510.020313
[2025-11-25 00:26:25] 2025-11-25 05:25:50,721 | INFO     | chi2: 2.721792308772257
[2025-11-25 00:26:25] 2025-11-25 05:25:50,721 | INFO     | current chi2=2.721792308772257 (change=22.13757138058784 %)
[2025-11-25 00:26:25] 2025-11-25 05:25:50,721 | INFO     | right removable region: 707
[2025-11-25 00:26:25] 2025-11-25 05:25:50,722 | INFO     | sum of square deviations: 112394470455.09079
[2025-11-25 00:26:25] 2025-11-25 05:25:50,733 | INFO     | sum of deviations: 413694457816.91437
[2025-11-25 00:26:25] 2025-11-25 05:25:50,733 | INFO     | mean x: 1764026560.6802244
[2025-11-25 00:26:25] 2025-11-25 05:25:50,733 | INFO     | mean y: 3279396.2847124822
[2025-11-25 00:26:25] 2025-11-25 05:25:50,734 | INFO     | intersect: -6489637992.2698555
[2025-11-25 00:26:25] 2025-11-25 05:25:50,734 | INFO     | chi2: 3.9389310530339356
[2025-11-25 00:26:25] 2025-11-25 05:25:50,734 | INFO     | current chi2=3.9389310530339356 (change=39.19069478392782 %)
[2025-11-25 00:26:25] 2025-11-25 05:25:50,735 | INFO     | sum of square deviations: 110046358962.13007
[2025-11-25 00:26:25] 2025-11-25 05:25:50,746 | INFO     | sum of deviations: 368648211913.7465
[2025-11-25 00:26:25] 2025-11-25 05:25:50,746 | INFO     | mean x: 1764026713.183616
[2025-11-25 00:26:25] 2025-11-25 05:25:50,746 | INFO     | mean y: 3282320.2711864407
[2025-11-25 00:26:25] 2025-11-25 05:25:50,747 | INFO     | intersect: -5906093507.48347
[2025-11-25 00:26:25] 2025-11-25 05:25:50,747 | INFO     | chi2: 3.8918447189277225
[2025-11-25 00:26:25] 2025-11-25 05:25:50,747 | INFO     | current chi2=3.8918447189277225 (change=1.195408944006399 %)
[2025-11-25 00:26:25] 2025-11-25 05:25:50,748 | INFO     | left removable region: 20
[2025-11-25 00:26:25] 2025-11-25 05:25:50,748 | INFO     | sum of square deviations: 100541867519.02472
[2025-11-25 00:26:25] 2025-11-25 05:25:50,758 | INFO     | sum of deviations: 713267056198.4453
[2025-11-25 00:26:25] 2025-11-25 05:25:50,758 | INFO     | mean x: 1764026682.6972344
[2025-11-25 00:26:25] 2025-11-25 05:25:50,758 | INFO     | mean y: 3311929.5502183405
[2025-11-25 00:26:25] 2025-11-25 05:25:50,759 | INFO     | intersect: -12511097739.485243
[2025-11-25 00:26:25] 2025-11-25 05:25:50,759 | INFO     | chi2: 0.07228781617101161
[2025-11-25 00:26:25] 2025-11-25 05:25:50,760 | INFO     | current memory leak: 7.09 B/s (using 687 data points, chi2=0.07)
[2025-11-25 00:26:25] 2025-11-25 05:25:50,760 | INFO     | could have reported an average CPU frequency of 2179 MHz (27 samples)
[2025-11-25 00:26:25] 2025-11-25 05:25:50,760 | INFO     | ..............................
[2025-11-25 00:26:25] 2025-11-25 05:25:50,761 | INFO     | . Timing measurements:
[2025-11-25 00:26:25] 2025-11-25 05:25:50,761 | INFO     | . get job = 0 s
[2025-11-25 00:26:25] 2025-11-25 05:25:50,761 | INFO     | . initial setup = 2 s
[2025-11-25 00:26:25] 2025-11-25 05:25:50,761 | INFO     | . payload setup = 9 s
[2025-11-25 00:26:25] 2025-11-25 05:25:50,761 | INFO     | . stage-in = 0 s
[2025-11-25 00:26:25] 2025-11-25 05:25:50,761 | INFO     | . payload execution = 43798 s
[2025-11-25 00:26:25] 2025-11-25 05:25:50,762 | INFO     | . stage-out = 3 s
[2025-11-25 00:26:25] 2025-11-25 05:25:50,762 | INFO     | . log creation = 0 s
[2025-11-25 00:26:25] 2025-11-25 05:25:50,762 | INFO     | ..............................
[2025-11-25 00:26:25] 2025-11-25 05:25:50,971 | INFO     | PID=25278 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 00:26:25] 2025-11-25 05:25:51,035 | INFO     | 
[2025-11-25 00:26:25] 2025-11-25 05:25:51,035 | INFO     | job summary report
[2025-11-25 00:26:25] 2025-11-25 05:25:51,035 | INFO     | --------------------------------------------------
[2025-11-25 00:26:25] 2025-11-25 05:25:51,035 | INFO     | PanDA job id: 6895365737
[2025-11-25 00:26:25] 2025-11-25 05:25:51,036 | INFO     | task id: 47556137
[2025-11-25 00:26:25] 2025-11-25 05:25:51,036 | INFO     | errors: (none)
[2025-11-25 00:26:25] 2025-11-25 05:25:51,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:26:25] 2025-11-25 05:25:51,036 | INFO     | pilot state: finished 
[2025-11-25 00:26:25] 2025-11-25 05:25:51,036 | INFO     | transexitcode: 0
[2025-11-25 00:26:25] 2025-11-25 05:25:51,037 | INFO     | exeerrorcode: 0
[2025-11-25 00:26:25] 2025-11-25 05:25:51,037 | INFO     | exeerrordiag: 
[2025-11-25 00:26:25] 2025-11-25 05:25:51,037 | INFO     | exitcode: 0
[2025-11-25 00:26:25] 2025-11-25 05:25:51,037 | INFO     | exitmsg: OK
[2025-11-25 00:26:25] 2025-11-25 05:25:51,037 | INFO     | cpuconsumptiontime: 339410 s
[2025-11-25 00:26:25] 2025-11-25 05:25:51,037 | INFO     | nevents: 1000
[2025-11-25 00:26:25] 2025-11-25 05:25:51,037 | INFO     | neventsw: 0
[2025-11-25 00:26:25] 2025-11-25 05:25:51,037 | INFO     | pid: 31713
[2025-11-25 00:26:25] 2025-11-25 05:25:51,038 | INFO     | pgrp: 31713
[2025-11-25 00:26:25] 2025-11-25 05:25:51,038 | INFO     | corecount: 8
[2025-11-25 00:26:25] 2025-11-25 05:25:51,038 | INFO     | event service: False
[2025-11-25 00:26:25] 2025-11-25 05:25:51,038 | INFO     | sizes: {0: 2284309, 1: 2284309, 6: 2284599, 11: 2284627, 43810: 2330109, 43816: 2339103, 43819: 2339287, 43826: 2339533}
[2025-11-25 00:26:25] 2025-11-25 05:25:51,038 | INFO     | --------------------------------------------------
[2025-11-25 00:26:25] 2025-11-25 05:25:51,038 | INFO     | 
[2025-11-25 00:26:25] 2025-11-25 05:25:51,038 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 00:26:25] 2025-11-25 05:25:51,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,069 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,069 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,070 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,070 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,070 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,070 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,072 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:26:25] 2025-11-25 05:25:51,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,072 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:26:25] 2025-11-25 05:25:51,073 | INFO     | job 6895365737 has completed (purged errors)
[2025-11-25 00:26:25] 2025-11-25 05:25:51,073 | INFO     | overall cleanup function is called
[2025-11-25 00:26:25] 2025-11-25 05:25:52,089 | INFO     | --- collectZombieJob: --- 10, [31713]
[2025-11-25 00:26:25] 2025-11-25 05:25:52,089 | INFO     | zombie collector waiting for pid 31713
[2025-11-25 00:26:25] 2025-11-25 05:25:52,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:26:25] 2025-11-25 05:25:52,090 | INFO     | collected zombie processes
[2025-11-25 00:26:25] 2025-11-25 05:25:52,090 | INFO     | will attempt to kill all subprocesses of pid=31713
[2025-11-25 00:26:25] 2025-11-25 05:25:52,186 | INFO     | process IDs to be killed: [31713] (in reverse order)
[2025-11-25 00:26:25] 2025-11-25 05:25:52,244 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:26:25] 2025-11-25 05:25:52,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:26:25] 2025-11-25 05:25:52,249 | INFO     | did not find any defunct processes belonging to 31713
[2025-11-25 00:26:25] 2025-11-25 05:25:52,252 | INFO     | did not find any defunct processes belonging to 31713
[2025-11-25 00:26:25] 2025-11-25 05:25:52,255 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:26:25] 2025-11-25 05:25:52,255 | INFO     | ready for new job
[2025-11-25 00:26:25] 2025-11-25 05:25:52,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:26:25] 2025-11-25 05:25:52,259 | INFO     | ***************************************
[2025-11-25 00:26:25] 2025-11-25 05:25:52,260 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:26:25] 2025-11-25 05:25:52,260 | INFO     | ***************************************
[2025-11-25 00:26:25] 2025-11-25 05:25:52,260 | INFO     | 
[2025-11-25 00:26:25] 2025-11-25 05:25:52,260 | INFO     | architecture information:
[2025-11-25 00:26:25] 2025-11-25 05:25:52,261 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:26:25] 2025-11-25 05:25:52,280 | INFO     | cat /etc/os-release:
[2025-11-25 00:26:25] NAME="CentOS Linux"
[2025-11-25 00:26:25] VERSION="7 (Core)"
[2025-11-25 00:26:25] ID="centos"
[2025-11-25 00:26:25] ID_LIKE="rhel fedora"
[2025-11-25 00:26:25] VERSION_ID="7"
[2025-11-25 00:26:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:26:25] ANSI_COLOR="0;31"
[2025-11-25 00:26:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:26:25] HOME_URL="https://www.centos.org/"
[2025-11-25 00:26:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:26:25] 
[2025-11-25 00:26:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:26:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:26:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:26:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:26:25] 
[2025-11-25 00:26:25] 2025-11-25 05:25:52,281 | INFO     | ***************************************
[2025-11-25 00:26:25] 2025-11-25 05:25:52,784 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 00:26:25] 2025-11-25 05:25:52,808 | INFO     | sufficient remaining disk space (17439916032 B)
[2025-11-25 00:26:25] 2025-11-25 05:25:52,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:26:25] 2025-11-25 05:25:52,809 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:26:25] 2025-11-25 05:25:52,809 | INFO     | update_server=False
[2025-11-25 00:26:25] 2025-11-25 05:25:52,809 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:26:25] 2025-11-25 05:25:52,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:26:25] 2025-11-25 05:25:53,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:26:25] 2025-11-25 05:25:53,365 | INFO     | all job control threads have been joined
[2025-11-25 00:26:25] 2025-11-25 05:25:53,375 | INFO     | all data control threads have been joined
[2025-11-25 00:26:25] 2025-11-25 05:25:53,475 | INFO     | all payload control threads have been joined
[2025-11-25 00:26:25] 2025-11-25 05:25:53,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:26:25] 2025-11-25 05:25:53,724 | INFO     | aborting loop
[2025-11-25 00:26:25] 2025-11-25 05:25:53,815 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:53,816 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:53,910 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:53,957 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:54,066 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:26:25] 2025-11-25 05:25:54,371 | INFO     | [job] control thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:54,380 | INFO     | [data] control thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:54,480 | INFO     | [payload] control thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:54,707 | INFO     | [job] validate thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:54,729 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:54,763 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:54,849 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:55,088 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:55,214 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:55,239 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:55,355 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:25:58,072 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:26:25] 2025-11-25 05:26:19,458 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:26:25] 2025-11-25 05:26:19,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140334402967360)>', '<ExcThread(monitor, started 140333660747520)>']
[2025-11-25 00:26:25] 2025-11-25 05:26:23,174 | INFO     | PID=25278 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 00:26:25] 2025-11-25 05:26:23,174 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:26:25] 2025-11-25 05:26:23,174 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:26:25] 2025-11-25 05:26:23,175 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:26:25] 2025-11-25 05:26:23,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:26:25] 2025-11-25 05:26:23,175 | INFO     | [monitor] control thread has ended
[2025-11-25 00:26:25] 2025-11-25 05:26:24,889 | INFO     | all workflow threads have been joined
[2025-11-25 00:26:25] 2025-11-25 05:26:24,889 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:26:25] 2025-11-25 05:26:24,890 | INFO     | traces error code: 0
[2025-11-25 00:26:25] 2025-11-25 05:26:24,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:26:25] 2025-11-25 05:26:25,022 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:26:25] 2025-11-25 05:26:25,027 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:26:25] 2025-11-25 05:26:25,031 [wrapper] pilotpid: 25278
[2025-11-25 00:26:25] 2025-11-25 05:26:25,036 [wrapper] Pilot exit status: 0
[2025-11-25 00:26:25] 2025-11-25 05:26:25,053 [wrapper] pandaids: 6895365737
[2025-11-25 00:26:25] 2025-11-25 05:26:25,096 [wrapper] cleanup supervisor_pilot 19606 25279
[2025-11-25 00:26:25] 2025-11-25 05:26:25,101 [wrapper] Test setup, not cleaning
[2025-11-25 00:26:25] 2025-11-25 05:26:25,106 [wrapper] apfmon messages muted
[2025-11-25 00:26:25] 2025-11-25 05:26:25,110 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:26:25] 2025-11-25 05:26:25,115 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:26:25]  *** Error codes and diagnostics ***
[2025-11-25 00:26:25]     "exeErrorCode": 0,
[2025-11-25 00:26:25]     "exeErrorDiag": "",
[2025-11-25 00:26:25]     "pilotErrorCode": 0,
[2025-11-25 00:26:25]     "pilotErrorDiag": "",
[2025-11-25 00:26:25]  *** Listing of results directory ***
[2025-11-25 00:26:25] total 1316580
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 12:39 pilot3.tar.gz
[2025-11-25 00:26:25] -rwx------ 1 boincer umatlas     36292 Nov 23 12:54 runpilot2-wrapper.sh
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 12:54 queuedata.json
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas       100 Nov 24 12:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:26:25] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 12:14 run_atlas
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas       105 Nov 24 12:14 job.xml
[2025-11-25 00:26:25] -rw-r--r-- 2 boincer umatlas 409827837 Nov 24 12:14 EVNT.47483658._000831.pool.root.1
[2025-11-25 00:26:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 12:14 start_atlas.sh
[2025-11-25 00:26:25] drwxrwx--x 2 boincer umatlas      4096 Nov 24 12:14 shared
[2025-11-25 00:26:25] -rw-r--r-- 2 boincer umatlas    590098 Nov 24 12:14 input.tar.gz
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas         0 Nov 24 12:14 boinc_lockfile
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 12:14 pandaJob.out
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas        57 Nov 24 12:14 setup.sh.local
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas    991801 Nov 24 12:15 agis_schedconf.cvmfs.json
[2025-11-25 00:26:25] drwx------ 5 boincer umatlas      4096 Nov 24 12:15 pilot3
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas       532 Nov 25 00:13 boinc_task_state.xml
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas      5912 Nov 25 00:22 init_data.xml
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas 918409402 Nov 25 00:24 HITS.47556137._008180.pool.root.1
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas      1064 Nov 25 00:25 memory_monitor_summary.json
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas   1516227 Nov 25 00:25 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas   1975990 Nov 25 00:25 log.47556137._008180.job.log.tgz.1
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas      8661 Nov 25 00:25 heartbeat.json
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 00:25 boinc_mmap_file
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas        29 Nov 25 00:25 wrapper_checkpoint.txt
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas        95 Nov 25 00:26 pilot_heartbeat.json
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas      4746 Nov 25 00:26 pilotlog.txt
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas   6031707 Nov 25 00:26 log.47556137._008180.job.log.1
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas       353 Nov 25 00:26 output.list
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas       620 Nov 25 00:26 runtime_log
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas   8028160 Nov 25 00:26 result.tar.gz
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 00:26 runtime_log.err
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas       668 Nov 25 00:26 QuGODmqSTh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm24KKDmY8k9Vn.diag
[2025-11-25 00:26:25] -rw-r--r-- 1 boincer umatlas     21416 Nov 25 00:26 stderr.txt
[2025-11-25 00:26:25] HITS file was successfully produced:
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas 918409402 Nov 25 00:24 shared/HITS.pool.root.1
[2025-11-25 00:26:25]  *** Contents of shared directory: ***
[2025-11-25 00:26:25] total 1305556
[2025-11-25 00:26:25] -rw-r--r-- 2 boincer umatlas 409827837 Nov 24 12:14 ATLAS.root_0
[2025-11-25 00:26:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 12:14 start_atlas.sh
[2025-11-25 00:26:25] -rw-r--r-- 2 boincer umatlas    590098 Nov 24 12:14 input.tar.gz
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas 918409402 Nov 25 00:24 HITS.pool.root.1
[2025-11-25 00:26:25] -rw------- 1 boincer umatlas   8028160 Nov 25 00:26 result.tar.gz
00:26:26 (21441): run_atlas exited; CPU time 337146.522575
00:26:26 (21441): called boinc_finish(0)

</stderr_txt>
]]>

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