Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:15:26 (1008324): wrapper (7.7.26015): starting
11:15:26 (1008324): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 11:15:26] Arguments: --nthreads 8
[2025-11-25 11:15:26] Threads: 8
[2025-11-25 11:15:26] Checking for CVMFS
[2025-11-25 11:15:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:15:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:15:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:15:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:15:27] 2.13.2.0 6818 5487 74204 153278 0 81 3528811 4097024 0 130560 0 2502997 99.983 189883 13549 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-25 11:15:27] CVMFS is ok
[2025-11-25 11:15:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:15:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:15:27] Further information can be found at the LHC@home message board.
[2025-11-25 11:15:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:15:27] Checking for apptainer binary...
[2025-11-25 11:15:27] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-25 11:15:27] apptainer is not installed, using version from CVMFS
[2025-11-25 11:15:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:15:27] pckeatlas02
[2025-11-25 11:15:27] apptainer works
[2025-11-25 11:15:27] Set ATHENA_PROC_NUMBER=8
[2025-11-25 11:15:27] Set ATHENA_CORE_NUMBER=8
[2025-11-25 11:15:27] Starting ATLAS job with PandaID=6895361823
[2025-11-25 11:15:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 18:47:21]  *** The last 200 lines of the pilot log: ***
[2025-11-25 18:47:21] 2025-11-25 17:46:16,338 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-25 18:47:21] 2025-11-25 17:46:17,070 | INFO     | time since job start (27046s) is within the limit (172800.0s)
[2025-11-25 18:47:21] 2025-11-25 17:46:17,506 | INFO     | monitor loop #2040: job 0:6895361823 is in state 'finished'
[2025-11-25 18:47:21] 2025-11-25 17:46:17,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:47:21] 2025-11-25 17:46:18,530 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 18:47:21] 2025-11-25 17:46:18,531 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3854.522625
[2025-11-25 18:47:21] 2025-11-25 17:46:18,532 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6895361823/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 18:47:21] 2025-11-25 17:46:18,532 | INFO     | extracted standard info from prmon json
[2025-11-25 18:47:21] 2025-11-25 17:46:18,532 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 18:47:21] 2025-11-25 17:46:18,533 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 18:47:21] 2025-11-25 17:46:18,536 | INFO     | fitting pss+swap vs Time
[2025-11-25 18:47:21] 2025-11-25 17:46:18,536 | INFO     | sum of square deviations: 26957982662.0
[2025-11-25 18:47:21] 2025-11-25 17:46:18,538 | INFO     | sum of deviations: 422698055458.99994
[2025-11-25 18:47:21] 2025-11-25 17:46:18,538 | INFO     | mean x: 1764079231.0
[2025-11-25 18:47:21] 2025-11-25 17:46:18,538 | INFO     | mean y: 3091828.8690744922
[2025-11-25 18:47:21] 2025-11-25 17:46:18,538 | INFO     | intersect: -27657466825.26231
[2025-11-25 18:47:21] 2025-11-25 17:46:18,538 | INFO     | chi2: 2.4269404090843087
[2025-11-25 18:47:21] 2025-11-25 17:46:18,539 | INFO     | sum of square deviations: 26055444809.5
[2025-11-25 18:47:21] 2025-11-25 17:46:18,540 | INFO     | sum of deviations: 494819615780.0
[2025-11-25 18:47:21] 2025-11-25 17:46:18,541 | INFO     | mean x: 1764079078.5
[2025-11-25 18:47:21] 2025-11-25 17:46:18,541 | INFO     | mean y: 3103965.109589041
[2025-11-25 18:47:21] 2025-11-25 17:46:18,541 | INFO     | intersect: -33498566730.246975
[2025-11-25 18:47:21] 2025-11-25 17:46:18,541 | INFO     | chi2: 1.4279785836569883
[2025-11-25 18:47:21] 2025-11-25 17:46:18,541 | INFO     | current chi2=1.4279785836569883 (change=41.16136604294423 %)
[2025-11-25 18:47:21] 2025-11-25 17:46:18,541 | INFO     | sum of square deviations: 25173279432.0
[2025-11-25 18:47:21] 2025-11-25 17:46:18,543 | INFO     | sum of deviations: 483949871999.0001
[2025-11-25 18:47:21] 2025-11-25 17:46:18,543 | INFO     | mean x: 1764078926.0
[2025-11-25 18:47:21] 2025-11-25 17:46:18,543 | INFO     | mean y: 3102085.8290993073
[2025-11-25 18:47:21] 2025-11-25 17:46:18,543 | INFO     | intersect: -33910865013.29215
[2025-11-25 18:47:21] 2025-11-25 17:46:18,543 | INFO     | chi2: 1.4253122582684608
[2025-11-25 18:47:21] 2025-11-25 17:46:18,543 | INFO     | current chi2=1.4253122582684608 (change=0.18672026450839163 %)
[2025-11-25 18:47:21] 2025-11-25 17:46:18,543 | INFO     | right removable region: 432
[2025-11-25 18:47:21] 2025-11-25 17:46:18,544 | INFO     | sum of square deviations: 26055444809.5
[2025-11-25 18:47:21] 2025-11-25 17:46:18,546 | INFO     | sum of deviations: 335057011808.49994
[2025-11-25 18:47:21] 2025-11-25 17:46:18,546 | INFO     | mean x: 1764079383.5
[2025-11-25 18:47:21] 2025-11-25 17:46:18,546 | INFO     | mean y: 3106573.029680365
[2025-11-25 18:47:21] 2025-11-25 17:46:18,546 | INFO     | intersect: -22681870450.006344
[2025-11-25 18:47:21] 2025-11-25 17:46:18,546 | INFO     | chi2: 1.1120143374911793
[2025-11-25 18:47:21] 2025-11-25 17:46:18,546 | INFO     | current chi2=1.1120143374911793 (change=54.18040206802006 %)
[2025-11-25 18:47:21] 2025-11-25 17:46:18,546 | INFO     | sum of square deviations: 25173279432.0
[2025-11-25 18:47:21] 2025-11-25 17:46:18,548 | INFO     | sum of deviations: 310892602562.0001
[2025-11-25 18:47:21] 2025-11-25 17:46:18,548 | INFO     | mean x: 1764079536.0
[2025-11-25 18:47:21] 2025-11-25 17:46:18,548 | INFO     | mean y: 3110747.351039261
[2025-11-25 18:47:21] 2025-11-25 17:46:18,548 | INFO     | intersect: -21783453834.14864
[2025-11-25 18:47:21] 2025-11-25 17:46:18,549 | INFO     | chi2: 1.092241931757607
[2025-11-25 18:47:21] 2025-11-25 17:46:18,549 | INFO     | current chi2=1.092241931757607 (change=1.7780711153581719 %)
[2025-11-25 18:47:21] 2025-11-25 17:46:18,549 | INFO     | left removable region: 20
[2025-11-25 18:47:21] 2025-11-25 17:46:18,549 | INFO     | sum of square deviations: 21685403803.0
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | sum of deviations: 335134809104.00006
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | mean x: 1764079505.5
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | mean y: 3128208.213592233
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | intersect: -27259654338.553326
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | chi2: 0.08078182562394769
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | current memory leak: 15.45 B/s (using 412 data points, chi2=0.08)
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | could have reported an average CPU frequency of 3786 MHz (18 samples)
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | ..............................
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | . Timing measurements:
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | . get job = 0 s
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | . initial setup = 0 s
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | . payload setup = 3 s
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | . stage-in = 0 s
[2025-11-25 18:47:21] 2025-11-25 17:46:18,551 | INFO     | . payload execution = 27020 s
[2025-11-25 18:47:21] 2025-11-25 17:46:18,552 | INFO     | . stage-out = 0 s
[2025-11-25 18:47:21] 2025-11-25 17:46:18,552 | INFO     | . log creation = 0 s
[2025-11-25 18:47:21] 2025-11-25 17:46:18,552 | INFO     | ..............................
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | 
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | job summary report
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | --------------------------------------------------
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | PanDA job id: 6895361823
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | task id: 47556137
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | errors: (none)
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | pilot state: finished 
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | transexitcode: 0
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | exeerrorcode: 0
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | exeerrordiag: 
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | exitcode: 0
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | exitmsg: OK
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | cpuconsumptiontime: 210485 s
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | nevents: 1000
[2025-11-25 18:47:21] 2025-11-25 17:46:18,587 | INFO     | neventsw: 0
[2025-11-25 18:47:21] 2025-11-25 17:46:18,588 | INFO     | pid: 1019396
[2025-11-25 18:47:21] 2025-11-25 17:46:18,588 | INFO     | pgrp: 1019396
[2025-11-25 18:47:21] 2025-11-25 17:46:18,588 | INFO     | corecount: 8
[2025-11-25 18:47:21] 2025-11-25 17:46:18,588 | INFO     | event service: False
[2025-11-25 18:47:21] 2025-11-25 17:46:18,588 | INFO     | sizes: {0: 2284316, 2: 2284578, 11: 2284606, 27027: 2322508, 27029: 2331504, 27030: 2331560, 27034: 2331934}
[2025-11-25 18:47:21] 2025-11-25 17:46:18,588 | INFO     | --------------------------------------------------
[2025-11-25 18:47:21] 2025-11-25 17:46:18,588 | INFO     | 
[2025-11-25 18:47:21] 2025-11-25 17:46:18,588 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,597 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 18:47:21] 2025-11-25 17:46:18,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,598 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 18:47:21] 2025-11-25 17:46:18,598 | INFO     | job 6895361823 has completed (purged errors)
[2025-11-25 18:47:21] 2025-11-25 17:46:18,598 | INFO     | overall cleanup function is called
[2025-11-25 18:47:21] 2025-11-25 17:46:19,606 | INFO     | --- collectZombieJob: --- 10, [1019396]
[2025-11-25 18:47:21] 2025-11-25 17:46:19,606 | INFO     | zombie collector waiting for pid 1019396
[2025-11-25 18:47:21] 2025-11-25 17:46:19,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 18:47:21] 2025-11-25 17:46:19,606 | INFO     | collected zombie processes
[2025-11-25 18:47:21] 2025-11-25 17:46:19,606 | INFO     | will attempt to kill all subprocesses of pid=1019396
[2025-11-25 18:47:21] 2025-11-25 17:46:19,636 | INFO     | process IDs to be killed: [1019396] (in reverse order)
[2025-11-25 18:47:21] 2025-11-25 17:46:19,652 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 18:47:21] 2025-11-25 17:46:19,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 18:47:21] 2025-11-25 17:46:19,653 | INFO     | did not find any defunct processes belonging to 1019396
[2025-11-25 18:47:21] 2025-11-25 17:46:19,654 | INFO     | did not find any defunct processes belonging to 1019396
[2025-11-25 18:47:21] 2025-11-25 17:46:19,654 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 18:47:21] 2025-11-25 17:46:19,654 | INFO     | ready for new job
[2025-11-25 18:47:21] 2025-11-25 17:46:19,654 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 18:47:21] 2025-11-25 17:46:19,655 | INFO     | ***************************************
[2025-11-25 18:47:21] 2025-11-25 17:46:19,655 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 18:47:21] 2025-11-25 17:46:19,655 | INFO     | ***************************************
[2025-11-25 18:47:21] 2025-11-25 17:46:19,655 | INFO     | 
[2025-11-25 18:47:21] 2025-11-25 17:46:19,656 | INFO     | architecture information:
[2025-11-25 18:47:21] 2025-11-25 17:46:19,656 | INFO     | executing command: cat /etc/os-release
[2025-11-25 18:47:21] 2025-11-25 17:46:19,662 | INFO     | cat /etc/os-release:
[2025-11-25 18:47:21] NAME="CentOS Linux"
[2025-11-25 18:47:21] VERSION="7 (Core)"
[2025-11-25 18:47:21] ID="centos"
[2025-11-25 18:47:21] ID_LIKE="rhel fedora"
[2025-11-25 18:47:21] VERSION_ID="7"
[2025-11-25 18:47:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 18:47:21] ANSI_COLOR="0;31"
[2025-11-25 18:47:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 18:47:21] HOME_URL="https://www.centos.org/"
[2025-11-25 18:47:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 18:47:21] 
[2025-11-25 18:47:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 18:47:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 18:47:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 18:47:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 18:47:21] 
[2025-11-25 18:47:21] 2025-11-25 17:46:19,662 | INFO     | ***************************************
[2025-11-25 18:47:21] 2025-11-25 17:46:20,165 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-11-25 18:47:21] 2025-11-25 17:46:20,171 | INFO     | sufficient remaining disk space (115475480576 B)
[2025-11-25 18:47:21] 2025-11-25 17:46:20,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 18:47:21] 2025-11-25 17:46:20,172 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 18:47:21] 2025-11-25 17:46:20,172 | INFO     | update_server=False
[2025-11-25 18:47:21] 2025-11-25 17:46:20,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 18:47:21] 2025-11-25 17:46:20,172 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 18:47:21] 2025-11-25 17:46:20,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:47:21] 2025-11-25 17:46:20,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 18:47:21] 2025-11-25 17:46:20,428 | INFO     | all data control threads have been joined
[2025-11-25 18:47:21] 2025-11-25 17:46:20,515 | INFO     | all job control threads have been joined
[2025-11-25 18:47:21] 2025-11-25 17:46:21,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:47:21] 2025-11-25 17:46:21,014 | INFO     | aborting loop
[2025-11-25 18:47:21] 2025-11-25 17:46:21,173 | INFO     | [job] retrieve thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:21,177 | INFO     | [job] queue monitor thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:21,433 | INFO     | [data] control thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:21,520 | INFO     | [job] control thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:21,639 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:21,660 | INFO     | all payload control threads have been joined
[2025-11-25 18:47:21] 2025-11-25 17:46:21,819 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:21,994 | INFO     | [job] validate thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:22,019 | INFO     | [job] job monitor thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:22,031 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:22,175 | INFO     | [data] copytool_out thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:22,257 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:22,284 | INFO     | [payload] validate_post thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:22,459 | INFO     | [data] copytool_in thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:22,532 | INFO     | [payload] failed_post thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:22,665 | INFO     | [payload] control thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:24,282 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 18:47:21] 2025-11-25 17:46:50,198 | INFO     | PID=1012083 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 18:47:21] 2025-11-25 17:46:50,199 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 18:47:21] 2025-11-25 17:46:50,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 18:47:21] 2025-11-25 17:46:50,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 18:47:21] 2025-11-25 17:47:15,943 | INFO     | [monitor] cgroup control has ended
[2025-11-25 18:47:21] 2025-11-25 17:47:16,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458507806528)>', '<ExcThread(monitor, started 140457820538624)>']
[2025-11-25 18:47:21] 2025-11-25 17:47:16,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 18:47:21] 2025-11-25 17:47:16,331 | INFO     | [monitor] control thread has ended
[2025-11-25 18:47:21] 2025-11-25 17:47:21,041 | INFO     | all workflow threads have been joined
[2025-11-25 18:47:21] 2025-11-25 17:47:21,041 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 18:47:21] 2025-11-25 17:47:21,041 | INFO     | traces error code: 0
[2025-11-25 18:47:21] 2025-11-25 17:47:21,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 18:47:21] 2025-11-25 17:47:21,099 [wrapper] ==== pilot stdout END ====
[2025-11-25 18:47:21] 2025-11-25 17:47:21,100 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 18:47:21] 2025-11-25 17:47:21,101 [wrapper] pilotpid: 1012083
[2025-11-25 18:47:21] 2025-11-25 17:47:21,102 [wrapper] Pilot exit status: 0
[2025-11-25 18:47:21] 2025-11-25 17:47:21,106 [wrapper] pandaids: 6895361823
[2025-11-25 18:47:21] 2025-11-25 17:47:21,116 [wrapper] cleanup supervisor_pilot 1087498 1012084
[2025-11-25 18:47:21] 2025-11-25 17:47:21,117 [wrapper] Test setup, not cleaning
[2025-11-25 18:47:21] 2025-11-25 17:47:21,118 [wrapper] apfmon messages muted
[2025-11-25 18:47:21] 2025-11-25 17:47:21,119 [wrapper] ==== wrapper stdout END ====
[2025-11-25 18:47:21] 2025-11-25 17:47:21,120 [wrapper] ==== wrapper stderr END ====
[2025-11-25 18:47:21]  *** Error codes and diagnostics ***
[2025-11-25 18:47:21]     "exeErrorCode": 0,
[2025-11-25 18:47:21]     "exeErrorDiag": "",
[2025-11-25 18:47:21]     "pilotErrorCode": 0,
[2025-11-25 18:47:21]     "pilotErrorDiag": "",
[2025-11-25 18:47:21]  *** Listing of results directory ***
[2025-11-25 18:47:21] total 1306664
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc    576529 Nov 23 15:16 pilot3.tar.gz
[2025-11-25 18:47:21] -rwx------. 1 boinc boinc     36292 Nov 23 15:31 runpilot2-wrapper.sh
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc      5112 Nov 23 15:31 queuedata.json
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc       100 Nov 25 11:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 18:47:21] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 11:15 run_atlas
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc       105 Nov 25 11:15 job.xml
[2025-11-25 18:47:21] -rw-r--r--. 2 boinc boinc 406682925 Nov 25 11:15 EVNT.47483658._000764.pool.root.1
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc      6277 Nov 25 11:15 init_data.xml
[2025-11-25 18:47:21] -rw-r--r--. 2 boinc boinc     15847 Nov 25 11:15 start_atlas.sh
[2025-11-25 18:47:21] drwxrwx--x. 2 boinc boinc        68 Nov 25 11:15 shared
[2025-11-25 18:47:21] -rw-r--r--. 2 boinc boinc    590104 Nov 25 11:15 input.tar.gz
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc         0 Nov 25 11:15 boinc_lockfile
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc      2786 Nov 25 11:15 pandaJob.out
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc    991894 Nov 25 11:15 agis_schedconf.cvmfs.json
[2025-11-25 18:47:21] drwx------. 5 boinc boinc      4096 Nov 25 11:15 pilot3
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc       532 Nov 25 18:41 boinc_task_state.xml
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc 916423983 Nov 25 18:45 HITS.47556137._007597.pool.root.1
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc      1038 Nov 25 18:46 memory_monitor_summary.json
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc        95 Nov 25 18:46 pilot_heartbeat.json
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc   1516240 Nov 25 18:46 agis_ddmendpoints.agis.ALL.json
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc   1701283 Nov 25 18:46 log.47556137._007597.job.log.tgz.1
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc      8622 Nov 25 18:46 heartbeat.json
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc      8192 Nov 25 18:47 boinc_mmap_file
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc        29 Nov 25 18:47 wrapper_checkpoint.txt
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc      4750 Nov 25 18:47 pilotlog.txt
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc   3804423 Nov 25 18:47 log.47556137._007597.job.log.1
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc       353 Nov 25 18:47 output.list
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc       620 Nov 25 18:47 runtime_log
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc   5529600 Nov 25 18:47 result.tar.gz
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc      8847 Nov 25 18:47 runtime_log.err
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc       663 Nov 25 18:47 dlHLDm5IQh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmZIKDmHWFk5n.diag
[2025-11-25 18:47:21] -rw-r--r--. 1 boinc boinc     21472 Nov 25 18:47 stderr.txt
[2025-11-25 18:47:21] HITS file was successfully produced:
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc 916423983 Nov 25 18:45 shared/HITS.pool.root.1
[2025-11-25 18:47:21]  *** Contents of shared directory: ***
[2025-11-25 18:47:21] total 1298096
[2025-11-25 18:47:21] -rw-r--r--. 2 boinc boinc 406682925 Nov 25 11:15 ATLAS.root_0
[2025-11-25 18:47:21] -rw-r--r--. 2 boinc boinc     15847 Nov 25 11:15 start_atlas.sh
[2025-11-25 18:47:21] -rw-r--r--. 2 boinc boinc    590104 Nov 25 11:15 input.tar.gz
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc 916423983 Nov 25 18:45 HITS.pool.root.1
[2025-11-25 18:47:21] -rw-------. 1 boinc boinc   5529600 Nov 25 18:47 result.tar.gz
18:47:22 (1008324): run_atlas exited; CPU time 210519.476800
18:47:22 (1008324): called boinc_finish(0)

</stderr_txt>
]]>

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