Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:07:11 (3478974): wrapper (7.7.26015): starting
10:07:11 (3478974): wrapper: running run_atlas (--nthreads 2)
[2025-11-24 10:07:11] Arguments: --nthreads 2
[2025-11-24 10:07:11] Threads: 2
[2025-11-24 10:07:11] Checking for CVMFS
[2025-11-24 10:07:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:07:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:07:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:07:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:07:11] 2.13.3.0 3137086 989 45184 153239 3 90 3576122 4096001 803 130560 0 639193 99.989 35610 2725 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-24 10:07:11] CVMFS is ok
[2025-11-24 10:07:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:07:11] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-24 10:07:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-24 10:07:11] Further information can be found at the LHC@home message board.
[2025-11-24 10:07:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:07:11] Checking for apptainer binary...
[2025-11-24 10:07:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:07:11] Running /usr/bin/apptainer --version
[2025-11-24 10:07:11] apptainer version 1.4.4
[2025-11-24 10:07:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:07:12] Ryzen-9-7950X3D-Zen4-Ubu24
[2025-11-24 10:07:12] apptainer works
[2025-11-24 10:07:12] Set ATHENA_PROC_NUMBER=2
[2025-11-24 10:07:12] Set ATHENA_CORE_NUMBER=2
[2025-11-24 10:07:12] Starting ATLAS job with PandaID=6895334208
[2025-11-24 10:07:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:53:10]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:53:10] 2025-11-24 23:52:38,295 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 00:53:10] 2025-11-24 23:52:38,297 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4403.355625
[2025-11-25 00:53:10] 2025-11-24 23:52:38,300 | INFO     | using path: /var/lib/boinc-client/slots/12/PanDA_Pilot-6895334208/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:53:10] 2025-11-24 23:52:38,301 | INFO     | extracted standard info from prmon json
[2025-11-25 00:53:10] 2025-11-24 23:52:38,301 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:53:10] 2025-11-24 23:52:38,301 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:53:10] 2025-11-24 23:52:38,307 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:53:10] 2025-11-24 23:52:38,307 | INFO     | sum of square deviations: 204895451020.0
[2025-11-25 00:53:10] 2025-11-24 23:52:38,315 | INFO     | sum of deviations: 272762365163.00027
[2025-11-25 00:53:10] 2025-11-24 23:52:38,315 | INFO     | mean x: 1764001801.0
[2025-11-25 00:53:10] 2025-11-24 23:52:38,315 | INFO     | mean y: 1949370.1458094146
[2025-11-25 00:53:10] 2025-11-24 23:52:38,315 | INFO     | intersect: -2346337529.3304815
[2025-11-25 00:53:10] 2025-11-24 23:52:38,315 | INFO     | chi2: 3.1944114007004685
[2025-11-25 00:53:10] 2025-11-24 23:52:38,316 | INFO     | sum of square deviations: 201387041052.5
[2025-11-25 00:53:10] 2025-11-24 23:52:38,323 | INFO     | sum of deviations: 389378793479.49994
[2025-11-25 00:53:10] 2025-11-24 23:52:38,323 | INFO     | mean x: 1764001648.5
[2025-11-25 00:53:10] 2025-11-24 23:52:38,323 | INFO     | mean y: 1954427.3937644341
[2025-11-25 00:53:10] 2025-11-24 23:52:38,323 | INFO     | intersect: -3408716040.770663
[2025-11-25 00:53:10] 2025-11-24 23:52:38,324 | INFO     | chi2: 1.4627168888174231
[2025-11-25 00:53:10] 2025-11-24 23:52:38,324 | INFO     | current chi2=1.4627168888174231 (change=54.21012808504629 %)
[2025-11-25 00:53:10] 2025-11-24 23:52:38,324 | INFO     | sum of square deviations: 197918910910.0
[2025-11-25 00:53:10] 2025-11-24 23:52:38,331 | INFO     | sum of deviations: 382670936378.9999
[2025-11-25 00:53:10] 2025-11-24 23:52:38,331 | INFO     | mean x: 1764001496.0
[2025-11-25 00:53:10] 2025-11-24 23:52:38,331 | INFO     | mean y: 1954132.4610917538
[2025-11-25 00:53:10] 2025-11-24 23:52:38,331 | INFO     | intersect: -3408695719.7666984
[2025-11-25 00:53:10] 2025-11-24 23:52:38,332 | INFO     | chi2: 1.4627132800615485
[2025-11-25 00:53:10] 2025-11-24 23:52:38,332 | INFO     | current chi2=1.4627132800615485 (change=0.0002467159504455465 %)
[2025-11-25 00:53:10] 2025-11-24 23:52:38,332 | INFO     | right removable region: 860
[2025-11-25 00:53:10] 2025-11-24 23:52:38,332 | INFO     | sum of square deviations: 201387041052.5
[2025-11-25 00:53:10] 2025-11-24 23:52:38,339 | INFO     | sum of deviations: 171053277642.5
[2025-11-25 00:53:10] 2025-11-24 23:52:38,340 | INFO     | mean x: 1764001953.5
[2025-11-25 00:53:10] 2025-11-24 23:52:38,340 | INFO     | mean y: 1953778.5946882218
[2025-11-25 00:53:10] 2025-11-24 23:52:38,340 | INFO     | intersect: -1496346779.0627785
[2025-11-25 00:53:10] 2025-11-24 23:52:38,340 | INFO     | chi2: 1.7982846539865143
[2025-11-25 00:53:10] 2025-11-24 23:52:38,340 | INFO     | current chi2=1.7982846539865143 (change=43.70528938156846 %)
[2025-11-25 00:53:10] 2025-11-24 23:52:38,341 | INFO     | sum of square deviations: 197918910910.0
[2025-11-25 00:53:10] 2025-11-24 23:52:38,348 | INFO     | sum of deviations: 167248450740.99994
[2025-11-25 00:53:10] 2025-11-24 23:52:38,348 | INFO     | mean x: 1764002106.0
[2025-11-25 00:53:10] 2025-11-24 23:52:38,348 | INFO     | mean y: 1953945.6898954704
[2025-11-25 00:53:10] 2025-11-24 23:52:38,348 | INFO     | intersect: -1488689964.8686016
[2025-11-25 00:53:10] 2025-11-24 23:52:38,348 | INFO     | chi2: 1.7981883186522851
[2025-11-25 00:53:10] 2025-11-24 23:52:38,348 | INFO     | current chi2=1.7981883186522851 (change=0.0053570681379940055 %)
[2025-11-25 00:53:10] 2025-11-24 23:52:38,348 | INFO     | left removable region: 20
[2025-11-25 00:53:10] 2025-11-24 23:52:38,349 | INFO     | sum of square deviations: 183787371530.0
[2025-11-25 00:53:10] 2025-11-24 23:52:38,357 | INFO     | sum of deviations: 252716967862.50003
[2025-11-25 00:53:10] 2025-11-24 23:52:38,357 | INFO     | mean x: 1764002075.5
[2025-11-25 00:53:10] 2025-11-24 23:52:38,357 | INFO     | mean y: 1959830.405952381
[2025-11-25 00:53:10] 2025-11-24 23:52:38,357 | INFO     | intersect: -2423632592.579155
[2025-11-25 00:53:10] 2025-11-24 23:52:38,357 | INFO     | chi2: 0.04737313799885519
[2025-11-25 00:53:10] 2025-11-24 23:52:38,357 | INFO     | current memory leak: 1.38 B/s (using 840 data points, chi2=0.05)
[2025-11-25 00:53:10] 2025-11-24 23:52:38,358 | INFO     | could have reported an average CPU frequency of 4440 MHz (33 samples)
[2025-11-25 00:53:10] 2025-11-24 23:52:38,358 | INFO     | ..............................
[2025-11-25 00:53:10] 2025-11-24 23:52:38,358 | INFO     | . Timing measurements:
[2025-11-25 00:53:10] 2025-11-24 23:52:38,358 | INFO     | . get job = 0 s
[2025-11-25 00:53:10] 2025-11-24 23:52:38,358 | INFO     | . initial setup = 1 s
[2025-11-25 00:53:10] 2025-11-24 23:52:38,358 | INFO     | . payload setup = 5 s
[2025-11-25 00:53:10] 2025-11-24 23:52:38,358 | INFO     | . stage-in = 0 s
[2025-11-25 00:53:10] 2025-11-24 23:52:38,358 | INFO     | . payload execution = 53085 s
[2025-11-25 00:53:10] 2025-11-24 23:52:38,358 | INFO     | . stage-out = 1 s
[2025-11-25 00:53:10] 2025-11-24 23:52:38,358 | INFO     | . log creation = 0 s
[2025-11-25 00:53:10] 2025-11-24 23:52:38,358 | INFO     | ..............................
[2025-11-25 00:53:10] 2025-11-24 23:52:38,402 | INFO     | 
[2025-11-25 00:53:10] 2025-11-24 23:52:38,402 | INFO     | job summary report
[2025-11-25 00:53:10] 2025-11-24 23:52:38,402 | INFO     | --------------------------------------------------
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | PanDA job id: 6895334208
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | task id: 47556137
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | errors: (none)
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | pilot state: finished 
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | transexitcode: 0
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | exeerrorcode: 0
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | exeerrordiag: 
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | exitcode: 0
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | exitmsg: OK
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | cpuconsumptiontime: 106143 s
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | nevents: 1000
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | neventsw: 0
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | pid: 3489873
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | pgrp: 3489873
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | corecount: 2
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | event service: False
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | sizes: {0: 2298764, 4: 2299026, 11: 2299054, 53095: 2348975, 53097: 2358832, 53103: 2359086}
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | --------------------------------------------------
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | 
[2025-11-25 00:53:10] 2025-11-24 23:52:38,403 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/12
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,431 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:53:10] 2025-11-24 23:52:38,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,431 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:53:10] 2025-11-24 23:52:38,431 | INFO     | job 6895334208 has completed (purged errors)
[2025-11-25 00:53:10] 2025-11-24 23:52:38,431 | INFO     | overall cleanup function is called
[2025-11-25 00:53:10] 2025-11-24 23:52:39,440 | INFO     | --- collectZombieJob: --- 10, [3489873]
[2025-11-25 00:53:10] 2025-11-24 23:52:39,440 | INFO     | zombie collector waiting for pid 3489873
[2025-11-25 00:53:10] 2025-11-24 23:52:39,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:53:10] 2025-11-24 23:52:39,440 | INFO     | collected zombie processes
[2025-11-25 00:53:10] 2025-11-24 23:52:39,440 | INFO     | will attempt to kill all subprocesses of pid=3489873
[2025-11-25 00:53:10] 2025-11-24 23:52:39,501 | INFO     | process IDs to be killed: [3489873] (in reverse order)
[2025-11-25 00:53:10] 2025-11-24 23:52:39,558 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:53:10] 2025-11-24 23:52:39,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:53:10] 2025-11-24 23:52:39,560 | INFO     | did not find any defunct processes belonging to 3489873
[2025-11-25 00:53:10] 2025-11-24 23:52:39,562 | INFO     | did not find any defunct processes belonging to 3489873
[2025-11-25 00:53:10] 2025-11-24 23:52:39,563 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:53:10] 2025-11-24 23:52:39,563 | INFO     | ready for new job
[2025-11-25 00:53:10] 2025-11-24 23:52:39,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:53:10] 2025-11-24 23:52:39,567 | INFO     | ***************************************
[2025-11-25 00:53:10] 2025-11-24 23:52:39,567 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:53:10] 2025-11-24 23:52:39,567 | INFO     | ***************************************
[2025-11-25 00:53:10] 2025-11-24 23:52:39,567 | INFO     | 
[2025-11-25 00:53:10] 2025-11-24 23:52:39,568 | INFO     | architecture information:
[2025-11-25 00:53:10] 2025-11-24 23:52:39,568 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:53:10] 2025-11-24 23:52:39,584 | INFO     | cat /etc/os-release:
[2025-11-25 00:53:10] NAME="CentOS Linux"
[2025-11-25 00:53:10] VERSION="7 (Core)"
[2025-11-25 00:53:10] ID="centos"
[2025-11-25 00:53:10] ID_LIKE="rhel fedora"
[2025-11-25 00:53:10] VERSION_ID="7"
[2025-11-25 00:53:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:53:10] ANSI_COLOR="0;31"
[2025-11-25 00:53:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:53:10] HOME_URL="https://www.centos.org/"
[2025-11-25 00:53:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:53:10] 
[2025-11-25 00:53:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:53:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:53:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:53:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:53:10] 
[2025-11-25 00:53:10] 2025-11-24 23:52:39,584 | INFO     | ***************************************
[2025-11-25 00:53:10] 2025-11-24 23:52:40,087 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/12
[2025-11-25 00:53:10] 2025-11-24 23:52:40,103 | INFO     | sufficient remaining disk space (1763200466944 B)
[2025-11-25 00:53:10] 2025-11-24 23:52:40,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:53:10] 2025-11-24 23:52:40,104 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:53:10] 2025-11-24 23:52:40,104 | INFO     | update_server=False
[2025-11-25 00:53:10] 2025-11-24 23:52:40,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:53:10] 2025-11-24 23:52:40,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:53:10] 2025-11-24 23:52:40,158 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 00:53:10] 2025-11-24 23:52:40,158 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 00:53:10] 2025-11-24 23:52:40,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:53:10] 2025-11-24 23:52:40,158 | INFO     | will abort loop
[2025-11-25 00:53:10] 2025-11-24 23:52:40,570 | INFO     | all job control threads have been joined
[2025-11-25 00:53:10] 2025-11-24 23:52:40,603 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:53:10] 2025-11-24 23:52:40,863 | INFO     | all data control threads have been joined
[2025-11-25 00:53:10] 2025-11-24 23:52:41,109 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:41,109 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:41,151 | INFO     | all payload control threads have been joined
[2025-11-25 00:53:10] 2025-11-24 23:52:41,163 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:41,454 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:41,575 | INFO     | [job] control thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:41,863 | INFO     | [job] validate thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:41,867 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:41,868 | INFO     | [data] control thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:41,932 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:41,932 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:42,136 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:42,156 | INFO     | [payload] control thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:42,608 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:42,679 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:43,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:53:10] 2025-11-24 23:52:47,150 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:48,814 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:53:10] 2025-11-24 23:52:50,288 | INFO     | job.realtimelogging is not enabled
[2025-11-25 00:53:10] 2025-11-24 23:52:51,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:53:10] 2025-11-24 23:52:52,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127009511614272)>', '<ExcThread(monitor, started 127008751216384)>']
[2025-11-25 00:53:10] 2025-11-24 23:52:57,624 | INFO     | all workflow threads have been joined
[2025-11-25 00:53:10] 2025-11-24 23:52:57,624 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:53:10] 2025-11-24 23:52:57,624 | INFO     | traces error code: 0
[2025-11-25 00:53:10] 2025-11-24 23:52:57,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:53:10] 2025-11-24 23:53:10,411 | INFO     | PID=3483166 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 00:53:10] 2025-11-24 23:53:10,411 | INFO     | .. there are 2 such processes running
[2025-11-25 00:53:10] 2025-11-24 23:53:10,412 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:53:10] 2025-11-24 23:53:10,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:53:10] 2025-11-24 23:53:10,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:53:10] 2025-11-24 23:53:10,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:53:10] 2025-11-24 23:53:10,412 | INFO     | [monitor] control thread has ended
[2025-11-25 00:53:10] 2025-11-24 23:53:10,521 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:53:10] 2025-11-24 23:53:10,525 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:53:10] 2025-11-24 23:53:10,527 [wrapper] pilotpid: 3483166
[2025-11-25 00:53:10] 2025-11-24 23:53:10,530 [wrapper] Pilot exit status: 0
[2025-11-25 00:53:10] 2025-11-24 23:53:10,538 [wrapper] pandaids: 6895334208
[2025-11-25 00:53:10] 2025-11-24 23:53:10,564 [wrapper] cleanup supervisor_pilot 3782776 3483167
[2025-11-25 00:53:10] 2025-11-24 23:53:10,566 [wrapper] Test setup, not cleaning
[2025-11-25 00:53:10] 2025-11-24 23:53:10,568 [wrapper] apfmon messages muted
[2025-11-25 00:53:10] 2025-11-24 23:53:10,570 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:53:10] 2025-11-24 23:53:10,577 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:53:10]  *** Error codes and diagnostics ***
[2025-11-25 00:53:10]     "exeErrorCode": 0,
[2025-11-25 00:53:10]     "exeErrorDiag": "",
[2025-11-25 00:53:10]     "pilotErrorCode": 0,
[2025-11-25 00:53:10]     "pilotErrorDiag": "",
[2025-11-25 00:53:10]  *** Listing of results directory ***
[2025-11-25 00:53:10] total 1309076
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc    576529 Nov 22 03:56 pilot3.tar.gz
[2025-11-25 00:53:10] -rwx------ 1 boinc boinc     36292 Nov 22 04:10 runpilot2-wrapper.sh
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc      5112 Nov 22 04:10 queuedata.json
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc       100 Nov 24 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:53:10] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 10:07 run_atlas
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc       105 Nov 24 10:07 job.xml
[2025-11-25 00:53:10] -rw-r--r-- 2 boinc boinc     15847 Nov 24 10:07 start_atlas.sh
[2025-11-25 00:53:10] drwxrwx--x 2 boinc boinc      4096 Nov 24 10:07 shared
[2025-11-25 00:53:10] -rw-r--r-- 2 boinc boinc    590097 Nov 24 10:07 input.tar.gz
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc      9570 Nov 24 10:07 init_data.xml
[2025-11-25 00:53:10] -rw-r--r-- 2 boinc boinc 406983913 Nov 24 10:07 EVNT.47483658._000230.pool.root.1
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc         0 Nov 24 10:07 boinc_lockfile
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc      2785 Nov 24 10:07 pandaJob.out
[2025-11-25 00:53:10] -rw------- 1 boinc boinc    989794 Nov 24 10:07 agis_schedconf.cvmfs.json
[2025-11-25 00:53:10] drwx------ 5 boinc boinc      4096 Nov 24 10:07 pilot3
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc       533 Nov 25 00:49 boinc_task_state.xml
[2025-11-25 00:53:10] -rw------- 1 boinc boinc 911576045 Nov 25 00:52 HITS.47556137._002265.pool.root.1
[2025-11-25 00:53:10] -rw------- 1 boinc boinc      1033 Nov 25 00:52 memory_monitor_summary.json
[2025-11-25 00:53:10] -rw------- 1 boinc boinc   1516227 Nov 25 00:52 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:53:10] -rw------- 1 boinc boinc   1336222 Nov 25 00:52 log.47556137._002265.job.log.tgz.1
[2025-11-25 00:53:10] -rw------- 1 boinc boinc        95 Nov 25 00:52 pilot_heartbeat.json
[2025-11-25 00:53:10] -rw------- 1 boinc boinc      8577 Nov 25 00:52 heartbeat.json
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc      8192 Nov 25 00:53 boinc_mmap_file
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc        29 Nov 25 00:53 wrapper_checkpoint.txt
[2025-11-25 00:53:10] -rw------- 1 boinc boinc       822 Nov 25 00:53 pilotlog.txt
[2025-11-25 00:53:10] -rw------- 1 boinc boinc   7671749 Nov 25 00:53 log.47556137._002265.job.log.1
[2025-11-25 00:53:10] -rw------- 1 boinc boinc       353 Nov 25 00:53 output.list
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc       620 Nov 25 00:53 runtime_log
[2025-11-25 00:53:10] -rw------- 1 boinc boinc   9031680 Nov 25 00:53 result.tar.gz
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc      8986 Nov 25 00:53 runtime_log.err
[2025-11-25 00:53:10] -rw------- 1 boinc boinc       666 Nov 25 00:53 He4LDmrBtg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGvHKDmcHl4Mo.diag
[2025-11-25 00:53:10] -rw-r--r-- 1 boinc boinc     21298 Nov 25 00:53 stderr.txt
[2025-11-25 00:53:10] HITS file was successfully produced:
[2025-11-25 00:53:10] -rw------- 1 boinc boinc 911576045 Nov 25 00:52 shared/HITS.pool.root.1
[2025-11-25 00:53:10]  *** Contents of shared directory: ***
[2025-11-25 00:53:10] total 1297084
[2025-11-25 00:53:10] -rw-r--r-- 2 boinc boinc     15847 Nov 24 10:07 start_atlas.sh
[2025-11-25 00:53:10] -rw-r--r-- 2 boinc boinc    590097 Nov 24 10:07 input.tar.gz
[2025-11-25 00:53:10] -rw-r--r-- 2 boinc boinc 406983913 Nov 24 10:07 ATLAS.root_0
[2025-11-25 00:53:10] -rw------- 1 boinc boinc 911576045 Nov 25 00:52 HITS.pool.root.1
[2025-11-25 00:53:10] -rw------- 1 boinc boinc   9031680 Nov 25 00:53 result.tar.gz
00:53:12 (3478974): run_atlas exited; CPU time 106152.219156
00:53:12 (3478974): called boinc_finish(0)

</stderr_txt>
]]>

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