Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:07:40 (26714): wrapper (7.7.26015): starting
00:07:40 (26714): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:07:40] Arguments: --nthreads 8
[2025-11-24 00:07:40] Threads: 8
[2025-11-24 00:07:40] Checking for CVMFS
[2025-11-24 00:07:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:07:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:07:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:07:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:07:40] 2.11.2.0 2840 64314 79600 153234 2 9 14916555 20275201 1 130560 0 16596195 99.810 4405105 26586 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:07:40] CVMFS is ok
[2025-11-24 00:07:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:07:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:07:40] Further information can be found at the LHC@home message board.
[2025-11-24 00:07:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:07:40] Checking for apptainer binary...
[2025-11-24 00:07:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:07:40] Running /usr/bin/apptainer --version
[2025-11-24 00:07:40] apptainer version 1.3.2-1.el7
[2025-11-24 00:07:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:07:42] c-204-39.aglt2.org
[2025-11-24 00:07:42] apptainer works
[2025-11-24 00:07:42] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:07:42] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:07:42] Starting ATLAS job with PandaID=6895369032
[2025-11-24 00:07:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 12:24:19]  *** The last 200 lines of the pilot log: ***
[2025-11-24 12:24:19] 2025-11-24 17:23:22,058 | INFO     | monitor loop #3253: job 0:6895369032 is in state 'finished'
[2025-11-24 12:24:19] 2025-11-24 17:23:22,059 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:24:19] 2025-11-24 17:23:22,786 | INFO     | time since job start (44123s) is within the limit (172800.0s)
[2025-11-24 12:24:19] 2025-11-24 17:23:24,110 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 12:24:19] 2025-11-24 17:23:24,113 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-24 12:24:19] 2025-11-24 17:23:24,115 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895369032/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 12:24:19] 2025-11-24 17:23:24,116 | INFO     | extracted standard info from prmon json
[2025-11-24 12:24:19] 2025-11-24 17:23:24,116 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 12:24:19] 2025-11-24 17:23:24,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 12:24:19] 2025-11-24 17:23:24,128 | INFO     | fitting pss+swap vs Time
[2025-11-24 12:24:19] 2025-11-24 17:23:24,128 | INFO     | sum of square deviations: 117190132611.5462
[2025-11-24 12:24:19] 2025-11-24 17:23:24,139 | INFO     | sum of deviations: 902940693654.4763
[2025-11-24 12:24:19] 2025-11-24 17:23:24,139 | INFO     | mean x: 1763982933.5408022
[2025-11-24 12:24:19] 2025-11-24 17:23:24,139 | INFO     | mean y: 2863406.7634854773
[2025-11-24 12:24:19] 2025-11-24 17:23:24,140 | INFO     | intersect: -13588485439.010084
[2025-11-24 12:24:19] 2025-11-24 17:23:24,140 | INFO     | chi2: 5.262429630967624
[2025-11-24 12:24:19] 2025-11-24 17:23:24,141 | INFO     | sum of square deviations: 114775685662.57376
[2025-11-24 12:24:19] 2025-11-24 17:23:24,152 | INFO     | sum of deviations: 1110777199335.5437
[2025-11-24 12:24:19] 2025-11-24 17:23:24,152 | INFO     | mean x: 1763982781.0445683
[2025-11-24 12:24:19] 2025-11-24 17:23:24,152 | INFO     | mean y: 2876527.639275766
[2025-11-24 12:24:19] 2025-11-24 17:23:24,152 | INFO     | intersect: -17068612454.488676
[2025-11-24 12:24:19] 2025-11-24 17:23:24,153 | INFO     | chi2: 2.8378540925342954
[2025-11-24 12:24:19] 2025-11-24 17:23:24,153 | INFO     | current chi2=2.8378540925342954 (change=46.07331039954471 %)
[2025-11-24 12:24:19] 2025-11-24 17:23:24,154 | INFO     | sum of square deviations: 112394634688.58061
[2025-11-24 12:24:19] 2025-11-24 17:23:24,164 | INFO     | sum of deviations: 1163022807392.9348
[2025-11-24 12:24:19] 2025-11-24 17:23:24,164 | INFO     | mean x: 1763982628.548387
[2025-11-24 12:24:19] 2025-11-24 17:23:24,165 | INFO     | mean y: 2879864.4656381486
[2025-11-24 12:24:19] 2025-11-24 17:23:24,165 | INFO     | intersect: -18250233680.776863
[2025-11-24 12:24:19] 2025-11-24 17:23:24,165 | INFO     | chi2: 2.5313133476260434
[2025-11-24 12:24:19] 2025-11-24 17:23:24,166 | INFO     | current chi2=2.5313133476260434 (change=10.801850092106081 %)
[2025-11-24 12:24:19] 2025-11-24 17:23:24,166 | INFO     | right removable region: 712
[2025-11-24 12:24:19] 2025-11-24 17:23:24,166 | INFO     | sum of square deviations: 114775447152.57372
[2025-11-24 12:24:19] 2025-11-24 17:23:24,177 | INFO     | sum of deviations: 706600202339.1097
[2025-11-24 12:24:19] 2025-11-24 17:23:24,177 | INFO     | mean x: 1763983086.0445683
[2025-11-24 12:24:19] 2025-11-24 17:23:24,177 | INFO     | mean y: 2875784.527855153
[2025-11-24 12:24:19] 2025-11-24 17:23:24,178 | INFO     | intersect: -10856858038.72573
[2025-11-24 12:24:19] 2025-11-24 17:23:24,178 | INFO     | chi2: 2.9824671240268326
[2025-11-24 12:24:19] 2025-11-24 17:23:24,178 | INFO     | current chi2=2.9824671240268326 (change=43.32528255625464 %)
[2025-11-24 12:24:19] 2025-11-24 17:23:24,179 | INFO     | sum of square deviations: 112394157668.58064
[2025-11-24 12:24:19] 2025-11-24 17:23:24,190 | INFO     | sum of deviations: 652401787789.741
[2025-11-24 12:24:19] 2025-11-24 17:23:24,190 | INFO     | mean x: 1763983238.548387
[2025-11-24 12:24:19] 2025-11-24 17:23:24,190 | INFO     | mean y: 2879255.079943899
[2025-11-24 12:24:19] 2025-11-24 17:23:24,190 | INFO     | intersect: -10236316823.54162
[2025-11-24 12:24:19] 2025-11-24 17:23:24,191 | INFO     | chi2: 2.9017253968021173
[2025-11-24 12:24:19] 2025-11-24 17:23:24,191 | INFO     | current chi2=2.9017253968021173 (change=2.7072126486913413 %)
[2025-11-24 12:24:19] 2025-11-24 17:23:24,191 | INFO     | left removable region: 20
[2025-11-24 12:24:19] 2025-11-24 17:23:24,192 | INFO     | sum of square deviations: 102752916183.68797
[2025-11-24 12:24:19] 2025-11-24 17:23:24,202 | INFO     | sum of deviations: 830850757654.7161
[2025-11-24 12:24:19] 2025-11-24 17:23:24,203 | INFO     | mean x: 1763983208.0578034
[2025-11-24 12:24:19] 2025-11-24 17:23:24,203 | INFO     | mean y: 2901315.182080925
[2025-11-24 12:24:19] 2025-11-24 17:23:24,203 | INFO     | intersect: -14260506861.818033
[2025-11-24 12:24:19] 2025-11-24 17:23:24,204 | INFO     | chi2: 0.10440799734605068
[2025-11-24 12:24:19] 2025-11-24 17:23:24,204 | INFO     | current memory leak: 8.09 B/s (using 692 data points, chi2=0.10)
[2025-11-24 12:24:19] 2025-11-24 17:23:24,204 | INFO     | could have reported an average CPU frequency of 2151 MHz (28 samples)
[2025-11-24 12:24:19] 2025-11-24 17:23:24,204 | INFO     | ..............................
[2025-11-24 12:24:19] 2025-11-24 17:23:24,205 | INFO     | . Timing measurements:
[2025-11-24 12:24:19] 2025-11-24 17:23:24,205 | INFO     | . get job = 0 s
[2025-11-24 12:24:19] 2025-11-24 17:23:24,205 | INFO     | . initial setup = 2 s
[2025-11-24 12:24:19] 2025-11-24 17:23:24,205 | INFO     | . payload setup = 9 s
[2025-11-24 12:24:19] 2025-11-24 17:23:24,205 | INFO     | . stage-in = 0 s
[2025-11-24 12:24:19] 2025-11-24 17:23:24,205 | INFO     | . payload execution = 44081 s
[2025-11-24 12:24:19] 2025-11-24 17:23:24,205 | INFO     | . stage-out = 3 s
[2025-11-24 12:24:19] 2025-11-24 17:23:24,206 | INFO     | . log creation = 0 s
[2025-11-24 12:24:19] 2025-11-24 17:23:24,206 | INFO     | ..............................
[2025-11-24 12:24:19] 2025-11-24 17:23:24,293 | INFO     | 
[2025-11-24 12:24:19] 2025-11-24 17:23:24,294 | INFO     | job summary report
[2025-11-24 12:24:19] 2025-11-24 17:23:24,294 | INFO     | --------------------------------------------------
[2025-11-24 12:24:19] 2025-11-24 17:23:24,294 | INFO     | PanDA job id: 6895369032
[2025-11-24 12:24:19] 2025-11-24 17:23:24,294 | INFO     | task id: 47556149
[2025-11-24 12:24:19] 2025-11-24 17:23:24,294 | INFO     | errors: (none)
[2025-11-24 12:24:19] 2025-11-24 17:23:24,294 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 12:24:19] 2025-11-24 17:23:24,295 | INFO     | pilot state: finished 
[2025-11-24 12:24:19] 2025-11-24 17:23:24,295 | INFO     | transexitcode: 0
[2025-11-24 12:24:19] 2025-11-24 17:23:24,295 | INFO     | exeerrorcode: 0
[2025-11-24 12:24:19] 2025-11-24 17:23:24,295 | INFO     | exeerrordiag: 
[2025-11-24 12:24:19] 2025-11-24 17:23:24,295 | INFO     | exitcode: 0
[2025-11-24 12:24:19] 2025-11-24 17:23:24,295 | INFO     | exitmsg: OK
[2025-11-24 12:24:19] 2025-11-24 17:23:24,295 | INFO     | cpuconsumptiontime: 341852 s
[2025-11-24 12:24:19] 2025-11-24 17:23:24,296 | INFO     | nevents: 1000
[2025-11-24 12:24:19] 2025-11-24 17:23:24,296 | INFO     | neventsw: 0
[2025-11-24 12:24:19] 2025-11-24 17:23:24,296 | INFO     | pid: 4567
[2025-11-24 12:24:19] 2025-11-24 17:23:24,296 | INFO     | pgrp: 4567
[2025-11-24 12:24:19] 2025-11-24 17:23:24,296 | INFO     | corecount: 8
[2025-11-24 12:24:19] 2025-11-24 17:23:24,296 | INFO     | event service: False
[2025-11-24 12:24:19] 2025-11-24 17:23:24,296 | INFO     | sizes: {0: 2298636, 1: 2298835, 6: 2299097, 11: 2299125, 44094: 2344770, 44098: 2354555, 44101: 2354739, 44107: 2354985}
[2025-11-24 12:24:19] 2025-11-24 17:23:24,296 | INFO     | --------------------------------------------------
[2025-11-24 12:24:19] 2025-11-24 17:23:24,296 | INFO     | 
[2025-11-24 12:24:19] 2025-11-24 17:23:24,297 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 12:24:19] 2025-11-24 17:23:24,325 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,326 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,326 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,326 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,328 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 12:24:19] 2025-11-24 17:23:24,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,329 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 12:24:19] 2025-11-24 17:23:24,329 | INFO     | job 6895369032 has completed (purged errors)
[2025-11-24 12:24:19] 2025-11-24 17:23:24,329 | INFO     | overall cleanup function is called
[2025-11-24 12:24:19] 2025-11-24 17:23:25,345 | INFO     | --- collectZombieJob: --- 10, [4567]
[2025-11-24 12:24:19] 2025-11-24 17:23:25,345 | INFO     | zombie collector waiting for pid 4567
[2025-11-24 12:24:19] 2025-11-24 17:23:25,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 12:24:19] 2025-11-24 17:23:25,346 | INFO     | collected zombie processes
[2025-11-24 12:24:19] 2025-11-24 17:23:25,346 | INFO     | will attempt to kill all subprocesses of pid=4567
[2025-11-24 12:24:19] 2025-11-24 17:23:25,436 | INFO     | process IDs to be killed: [4567] (in reverse order)
[2025-11-24 12:24:19] 2025-11-24 17:23:25,495 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 12:24:19] 2025-11-24 17:23:25,495 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 12:24:19] 2025-11-24 17:23:25,500 | INFO     | did not find any defunct processes belonging to 4567
[2025-11-24 12:24:19] 2025-11-24 17:23:25,504 | INFO     | did not find any defunct processes belonging to 4567
[2025-11-24 12:24:19] 2025-11-24 17:23:25,507 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 12:24:19] 2025-11-24 17:23:25,507 | INFO     | ready for new job
[2025-11-24 12:24:19] 2025-11-24 17:23:25,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 12:24:19] 2025-11-24 17:23:25,510 | INFO     | ***************************************
[2025-11-24 12:24:19] 2025-11-24 17:23:25,511 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 12:24:19] 2025-11-24 17:23:25,511 | INFO     | ***************************************
[2025-11-24 12:24:19] 2025-11-24 17:23:25,511 | INFO     | 
[2025-11-24 12:24:19] 2025-11-24 17:23:25,511 | INFO     | architecture information:
[2025-11-24 12:24:19] 2025-11-24 17:23:25,512 | INFO     | executing command: cat /etc/os-release
[2025-11-24 12:24:19] 2025-11-24 17:23:25,532 | INFO     | cat /etc/os-release:
[2025-11-24 12:24:19] NAME="CentOS Linux"
[2025-11-24 12:24:19] VERSION="7 (Core)"
[2025-11-24 12:24:19] ID="centos"
[2025-11-24 12:24:19] ID_LIKE="rhel fedora"
[2025-11-24 12:24:19] VERSION_ID="7"
[2025-11-24 12:24:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 12:24:19] ANSI_COLOR="0;31"
[2025-11-24 12:24:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 12:24:19] HOME_URL="https://www.centos.org/"
[2025-11-24 12:24:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 12:24:19] 
[2025-11-24 12:24:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 12:24:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 12:24:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 12:24:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 12:24:19] 
[2025-11-24 12:24:19] 2025-11-24 17:23:25,532 | INFO     | ***************************************
[2025-11-24 12:24:19] 2025-11-24 17:23:26,035 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 12:24:19] 2025-11-24 17:23:26,057 | INFO     | sufficient remaining disk space (17452498944 B)
[2025-11-24 12:24:19] 2025-11-24 17:23:26,058 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 12:24:19] 2025-11-24 17:23:26,058 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 12:24:19] 2025-11-24 17:23:26,058 | INFO     | update_server=False
[2025-11-24 12:24:19] 2025-11-24 17:23:26,059 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 12:24:19] 2025-11-24 17:23:26,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:24:19] 2025-11-24 17:23:26,059 | INFO     | aborting loop
[2025-11-24 12:24:19] 2025-11-24 17:23:26,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 12:24:19] 2025-11-24 17:23:26,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:24:19] 2025-11-24 17:23:26,445 | INFO     | all data control threads have been joined
[2025-11-24 12:24:19] 2025-11-24 17:23:27,064 | INFO     | [job] retrieve thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:27,065 | INFO     | [job] job monitor thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:27,066 | INFO     | [job] queue monitor thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:27,135 | INFO     | [job] validate thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:27,217 | INFO     | all payload control threads have been joined
[2025-11-24 12:24:19] 2025-11-24 17:23:27,257 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:27,257 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:27,450 | INFO     | [data] control thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:27,719 | INFO     | all job control threads have been joined
[2025-11-24 12:24:19] 2025-11-24 17:23:27,986 | INFO     | [payload] validate_post thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:28,065 | INFO     | [data] copytool_out thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:28,184 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:28,222 | INFO     | [payload] control thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:28,415 | INFO     | [data] copytool_in thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:28,448 | INFO     | [payload] failed_post thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:28,725 | INFO     | [job] control thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:28,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 12:24:19] 2025-11-24 17:23:32,797 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:36,940 | INFO     | job.realtimelogging is not enabled
[2025-11-24 12:24:19] 2025-11-24 17:23:37,945 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 12:24:19] 2025-11-24 17:23:55,998 | INFO     | PID=30423 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 12:24:19] 2025-11-24 17:23:55,999 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 12:24:19] 2025-11-24 17:23:55,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 12:24:19] 2025-11-24 17:23:55,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 12:24:19] 2025-11-24 17:24:12,292 | INFO     | [monitor] cgroup control has ended
[2025-11-24 12:24:19] 2025-11-24 17:24:13,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726034396992)>', '<ExcThread(monitor, started 139725050459904)>']
[2025-11-24 12:24:19] 2025-11-24 17:24:14,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 12:24:19] 2025-11-24 17:24:14,085 | INFO     | [monitor] control thread has ended
[2025-11-24 12:24:19] 2025-11-24 17:24:18,796 | INFO     | all workflow threads have been joined
[2025-11-24 12:24:19] 2025-11-24 17:24:18,796 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 12:24:19] 2025-11-24 17:24:18,797 | INFO     | traces error code: 0
[2025-11-24 12:24:19] 2025-11-24 17:24:18,797 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 12:24:19] 2025-11-24 17:24:18,907 [wrapper] ==== pilot stdout END ====
[2025-11-24 12:24:19] 2025-11-24 17:24:18,912 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 12:24:19] 2025-11-24 17:24:18,916 [wrapper] pilotpid: 30423
[2025-11-24 12:24:19] 2025-11-24 17:24:18,921 [wrapper] Pilot exit status: 0
[2025-11-24 12:24:19] 2025-11-24 17:24:18,935 [wrapper] pandaids: 6895369032
[2025-11-24 12:24:19] 2025-11-24 17:24:18,986 [wrapper] cleanup supervisor_pilot 20311 30424
[2025-11-24 12:24:19] 2025-11-24 17:24:18,991 [wrapper] Test setup, not cleaning
[2025-11-24 12:24:19] 2025-11-24 17:24:18,996 [wrapper] apfmon messages muted
[2025-11-24 12:24:19] 2025-11-24 17:24:19,002 [wrapper] ==== wrapper stdout END ====
[2025-11-24 12:24:19] 2025-11-24 17:24:19,007 [wrapper] ==== wrapper stderr END ====
[2025-11-24 12:24:19]  *** Error codes and diagnostics ***
[2025-11-24 12:24:19]     "exeErrorCode": 0,
[2025-11-24 12:24:19]     "exeErrorDiag": "",
[2025-11-24 12:24:19]     "pilotErrorCode": 0,
[2025-11-24 12:24:19]     "pilotErrorDiag": "",
[2025-11-24 12:24:19]  *** Listing of results directory ***
[2025-11-24 12:24:19] total 1302840
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 14:32 pilot3.tar.gz
[2025-11-24 12:24:19] -rwx------ 1 boincer umatlas     36292 Nov 23 14:51 runpilot2-wrapper.sh
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 14:51 queuedata.json
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas       100 Nov 24 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 12:24:19] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 00:07 run_atlas
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas       105 Nov 24 00:07 job.xml
[2025-11-24 12:24:19] -rw-r--r-- 2 boincer umatlas 410229360 Nov 24 00:07 EVNT.47483658._001189.pool.root.1
[2025-11-24 12:24:19] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 00:07 start_atlas.sh
[2025-11-24 12:24:19] drwxrwx--x 2 boincer umatlas      4096 Nov 24 00:07 shared
[2025-11-24 12:24:19] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 00:07 input.tar.gz
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas         0 Nov 24 00:07 boinc_lockfile
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 00:07 pandaJob.out
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas        57 Nov 24 00:07 setup.sh.local
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas    989786 Nov 24 00:07 agis_schedconf.cvmfs.json
[2025-11-24 12:24:19] drwx------ 5 boincer umatlas      4096 Nov 24 00:07 pilot3
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas       532 Nov 24 12:12 boinc_task_state.xml
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas      5912 Nov 24 12:22 init_data.xml
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas 903822675 Nov 24 12:22 HITS.47556149._001755.pool.root.1
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas      1062 Nov 24 12:23 memory_monitor_summary.json
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas   1516227 Nov 24 12:23 agis_ddmendpoints.agis.ALL.json
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas   1975209 Nov 24 12:23 log.47556149._001755.job.log.tgz.1
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas      8656 Nov 24 12:23 heartbeat.json
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas        95 Nov 24 12:23 pilot_heartbeat.json
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 12:24 boinc_mmap_file
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas        29 Nov 24 12:24 wrapper_checkpoint.txt
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas      4818 Nov 24 12:24 pilotlog.txt
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas   6096913 Nov 24 12:24 log.47556149._001755.job.log.1
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas       353 Nov 24 12:24 output.list
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas       620 Nov 24 12:24 runtime_log
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas   8089600 Nov 24 12:24 result.tar.gz
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 12:24 runtime_log.err
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas       668 Nov 24 12:24 1gILDmpIVh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKjIKDmmENken.diag
[2025-11-24 12:24:19] -rw-r--r-- 1 boincer umatlas     21283 Nov 24 12:24 stderr.txt
[2025-11-24 12:24:19] HITS file was successfully produced:
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas 903822675 Nov 24 12:22 shared/HITS.pool.root.1
[2025-11-24 12:24:19]  *** Contents of shared directory: ***
[2025-11-24 12:24:19] total 1291756
[2025-11-24 12:24:19] -rw-r--r-- 2 boincer umatlas 410229360 Nov 24 00:07 ATLAS.root_0
[2025-11-24 12:24:19] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 00:07 start_atlas.sh
[2025-11-24 12:24:19] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 00:07 input.tar.gz
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas 903822675 Nov 24 12:22 HITS.pool.root.1
[2025-11-24 12:24:19] -rw------- 1 boincer umatlas   8089600 Nov 24 12:24 result.tar.gz
12:24:21 (26714): run_atlas exited; CPU time 338154.055092
12:24:21 (26714): called boinc_finish(0)

</stderr_txt>
]]>

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