Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:23:03 (12377): wrapper (7.7.26015): starting
19:23:03 (12377): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 19:23:03] Arguments: --nthreads 8
[2025-11-23 19:23:03] Threads: 8
[2025-11-23 19:23:03] Checking for CVMFS
[2025-11-23 19:23:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 19:23:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 19:23:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 19:23:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 19:23:03] 2.11.2.0 2840 64030 79212 153227 2 1 13357817 20275201 1 130560 0 16477972 99.840 3939521 32535 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 19:23:03] CVMFS is ok
[2025-11-23 19:23:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 19:23:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 19:23:03] Further information can be found at the LHC@home message board.
[2025-11-23 19:23:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 19:23:03] Checking for apptainer binary...
[2025-11-23 19:23:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 19:23:03] Running /usr/bin/apptainer --version
[2025-11-23 19:23:03] apptainer version 1.3.2-1.el7
[2025-11-23 19:23:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 19:23:05] c-204-39.aglt2.org
[2025-11-23 19:23:05] apptainer works
[2025-11-23 19:23:05] Set ATHENA_PROC_NUMBER=8
[2025-11-23 19:23:05] Set ATHENA_CORE_NUMBER=8
[2025-11-23 19:23:05] Starting ATLAS job with PandaID=6894052139
[2025-11-23 19:23:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:06:58]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:06:58] 2025-11-24 05:06:03,903 | INFO     | time since job start (16960s) is within the limit (172800.0s)
[2025-11-24 00:06:58] 2025-11-24 05:06:04,165 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 00:06:58] 2025-11-24 05:06:04,169 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-24 00:06:58] 2025-11-24 05:06:04,171 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894052139/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 00:06:58] 2025-11-24 05:06:04,172 | INFO     | extracted standard info from prmon json
[2025-11-24 00:06:58] 2025-11-24 05:06:04,172 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:06:58] 2025-11-24 05:06:04,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:06:58] 2025-11-24 05:06:04,173 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 00:06:58] 2025-11-24 05:06:04,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 00:06:58] 2025-11-24 05:06:04,179 | INFO     | fitting pss+swap vs Time
[2025-11-24 00:06:58] 2025-11-24 05:06:04,179 | INFO     | sum of square deviations: 6662039329.5
[2025-11-24 00:06:58] 2025-11-24 05:06:04,181 | INFO     | sum of deviations: -36132086568.0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,182 | INFO     | mean x: 1763952285.5
[2025-11-24 00:06:58] 2025-11-24 05:06:04,182 | INFO     | mean y: 2577570.071942446
[2025-11-24 00:06:58] 2025-11-24 05:06:04,182 | INFO     | intersect: 9569509485.241365
[2025-11-24 00:06:58] 2025-11-24 05:06:04,182 | INFO     | chi2: 2.697803855812834
[2025-11-24 00:06:58] 2025-11-24 05:06:04,183 | INFO     | sum of square deviations: 6309000152.0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,185 | INFO     | sum of deviations: -16539547869.000002
[2025-11-24 00:06:58] 2025-11-24 05:06:04,185 | INFO     | mean x: 1763952133.0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,185 | INFO     | mean y: 2585914.6117216116
[2025-11-24 00:06:58] 2025-11-24 05:06:04,185 | INFO     | intersect: 4626927337.892474
[2025-11-24 00:06:58] 2025-11-24 05:06:04,185 | INFO     | chi2: 1.935457802773475
[2025-11-24 00:06:58] 2025-11-24 05:06:04,186 | INFO     | current chi2=1.935457802773475 (change=28.258023703123076 %)
[2025-11-24 00:06:58] 2025-11-24 05:06:04,186 | INFO     | sum of square deviations: 5968658887.0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,188 | INFO     | sum of deviations: -16119220933.499979
[2025-11-24 00:06:58] 2025-11-24 05:06:04,188 | INFO     | mean x: 1763951980.5
[2025-11-24 00:06:58] 2025-11-24 05:06:04,188 | INFO     | mean y: 2586102.9664179105
[2025-11-24 00:06:58] 2025-11-24 05:06:04,188 | INFO     | intersect: 4766391880.457543
[2025-11-24 00:06:58] 2025-11-24 05:06:04,189 | INFO     | chi2: 1.9347651837897046
[2025-11-24 00:06:58] 2025-11-24 05:06:04,189 | INFO     | current chi2=1.9347651837897046 (change=0.035785796144863845 %)
[2025-11-24 00:06:58] 2025-11-24 05:06:04,189 | INFO     | right removable region: 267
[2025-11-24 00:06:58] 2025-11-24 05:06:04,189 | INFO     | sum of square deviations: 6309000152.0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,191 | INFO     | sum of deviations: -84310239453.0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,191 | INFO     | mean x: 1763952438.0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,191 | INFO     | mean y: 2598233.4212454213
[2025-11-24 00:06:58] 2025-11-24 05:06:04,192 | INFO     | intersect: 23575153130.94142
[2025-11-24 00:06:58] 2025-11-24 05:06:04,192 | INFO     | chi2: 1.0870838561532827
[2025-11-24 00:06:58] 2025-11-24 05:06:04,192 | INFO     | current chi2=1.0870838561532827 (change=59.7048594244169 %)
[2025-11-24 00:06:58] 2025-11-24 05:06:04,193 | INFO     | sum of square deviations: 5968658887.0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,195 | INFO     | sum of deviations: -91592313648.5
[2025-11-24 00:06:58] 2025-11-24 05:06:04,195 | INFO     | mean x: 1763952590.5
[2025-11-24 00:06:58] 2025-11-24 05:06:04,195 | INFO     | mean y: 2601496.1604477614
[2025-11-24 00:06:58] 2025-11-24 05:06:04,195 | INFO     | intersect: 27071412428.220013
[2025-11-24 00:06:58] 2025-11-24 05:06:04,195 | INFO     | chi2: 1.0331111614411999
[2025-11-24 00:06:58] 2025-11-24 05:06:04,195 | INFO     | current chi2=1.0331111614411999 (change=4.964906286352995 %)
[2025-11-24 00:06:58] 2025-11-24 05:06:04,196 | INFO     | left removable region: 20
[2025-11-24 00:06:58] 2025-11-24 05:06:04,196 | INFO     | sum of square deviations: 4672638308.0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,198 | INFO     | sum of deviations: -60927579579.99999
[2025-11-24 00:06:58] 2025-11-24 05:06:04,198 | INFO     | mean x: 1763952560.0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,198 | INFO     | mean y: 2606649.2591093117
[2025-11-24 00:06:58] 2025-11-24 05:06:04,198 | INFO     | intersect: 23003179963.641293
[2025-11-24 00:06:58] 2025-11-24 05:06:04,198 | INFO     | chi2: 0.23006638373677443
[2025-11-24 00:06:58] 2025-11-24 05:06:04,198 | INFO     | current memory leak: -13.04 B/s (using 247 data points, chi2=0.23)
[2025-11-24 00:06:58] 2025-11-24 05:06:04,199 | INFO     | could have reported an average CPU frequency of 2086 MHz (13 samples)
[2025-11-24 00:06:58] 2025-11-24 05:06:04,199 | INFO     | ..............................
[2025-11-24 00:06:58] 2025-11-24 05:06:04,199 | INFO     | . Timing measurements:
[2025-11-24 00:06:58] 2025-11-24 05:06:04,199 | INFO     | . get job = 0 s
[2025-11-24 00:06:58] 2025-11-24 05:06:04,199 | INFO     | . initial setup = 2 s
[2025-11-24 00:06:58] 2025-11-24 05:06:04,199 | INFO     | . payload setup = 10 s
[2025-11-24 00:06:58] 2025-11-24 05:06:04,200 | INFO     | . stage-in = 0 s
[2025-11-24 00:06:58] 2025-11-24 05:06:04,200 | INFO     | . payload execution = 16916 s
[2025-11-24 00:06:58] 2025-11-24 05:06:04,200 | INFO     | . stage-out = 2 s
[2025-11-24 00:06:58] 2025-11-24 05:06:04,200 | INFO     | . log creation = 0 s
[2025-11-24 00:06:58] 2025-11-24 05:06:04,200 | INFO     | ..............................
[2025-11-24 00:06:58] 2025-11-24 05:06:04,288 | INFO     | 
[2025-11-24 00:06:58] 2025-11-24 05:06:04,288 | INFO     | job summary report
[2025-11-24 00:06:58] 2025-11-24 05:06:04,288 | INFO     | --------------------------------------------------
[2025-11-24 00:06:58] 2025-11-24 05:06:04,288 | INFO     | PanDA job id: 6894052139
[2025-11-24 00:06:58] 2025-11-24 05:06:04,288 | INFO     | task id: 47523659
[2025-11-24 00:06:58] 2025-11-24 05:06:04,289 | INFO     | errors: (none)
[2025-11-24 00:06:58] 2025-11-24 05:06:04,289 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:06:58] 2025-11-24 05:06:04,289 | INFO     | pilot state: finished 
[2025-11-24 00:06:58] 2025-11-24 05:06:04,289 | INFO     | transexitcode: 0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,289 | INFO     | exeerrorcode: 0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,289 | INFO     | exeerrordiag: 
[2025-11-24 00:06:58] 2025-11-24 05:06:04,290 | INFO     | exitcode: 0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,290 | INFO     | exitmsg: OK
[2025-11-24 00:06:58] 2025-11-24 05:06:04,290 | INFO     | cpuconsumptiontime: 128045 s
[2025-11-24 00:06:58] 2025-11-24 05:06:04,290 | INFO     | nevents: 400
[2025-11-24 00:06:58] 2025-11-24 05:06:04,290 | INFO     | neventsw: 0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,290 | INFO     | pid: 22519
[2025-11-24 00:06:58] 2025-11-24 05:06:04,291 | INFO     | pgrp: 22519
[2025-11-24 00:06:58] 2025-11-24 05:06:04,291 | INFO     | corecount: 8
[2025-11-24 00:06:58] 2025-11-24 05:06:04,291 | INFO     | event service: False
[2025-11-24 00:06:58] 2025-11-24 05:06:04,291 | INFO     | sizes: {0: 2298274, 1: 2298473, 7: 2298735, 11: 2298763, 16930: 2330745, 16934: 2339743, 16936: 2339927, 16943: 2340121}
[2025-11-24 00:06:58] 2025-11-24 05:06:04,291 | INFO     | --------------------------------------------------
[2025-11-24 00:06:58] 2025-11-24 05:06:04,291 | INFO     | 
[2025-11-24 00:06:58] 2025-11-24 05:06:04,292 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 00:06:58] 2025-11-24 05:06:04,320 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,320 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,321 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,321 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,321 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,321 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,321 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,322 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,322 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,322 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,322 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,322 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,323 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,323 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,323 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,323 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,323 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,324 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:06:58] 2025-11-24 05:06:04,324 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,324 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:06:58] 2025-11-24 05:06:04,324 | INFO     | job 6894052139 has completed (purged errors)
[2025-11-24 00:06:58] 2025-11-24 05:06:04,324 | INFO     | overall cleanup function is called
[2025-11-24 00:06:58] 2025-11-24 05:06:05,333 | INFO     | --- collectZombieJob: --- 10, [22519]
[2025-11-24 00:06:58] 2025-11-24 05:06:05,333 | INFO     | zombie collector waiting for pid 22519
[2025-11-24 00:06:58] 2025-11-24 05:06:05,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:06:58] 2025-11-24 05:06:05,340 | INFO     | collected zombie processes
[2025-11-24 00:06:58] 2025-11-24 05:06:05,340 | INFO     | will attempt to kill all subprocesses of pid=22519
[2025-11-24 00:06:58] 2025-11-24 05:06:05,430 | INFO     | process IDs to be killed: [22519] (in reverse order)
[2025-11-24 00:06:58] 2025-11-24 05:06:05,487 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:06:58] 2025-11-24 05:06:05,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:06:58] 2025-11-24 05:06:05,492 | INFO     | did not find any defunct processes belonging to 22519
[2025-11-24 00:06:58] 2025-11-24 05:06:05,496 | INFO     | did not find any defunct processes belonging to 22519
[2025-11-24 00:06:58] 2025-11-24 05:06:05,499 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:06:58] 2025-11-24 05:06:05,499 | INFO     | ready for new job
[2025-11-24 00:06:58] 2025-11-24 05:06:05,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:06:58] 2025-11-24 05:06:05,501 | INFO     | ***************************************
[2025-11-24 00:06:58] 2025-11-24 05:06:05,501 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:06:58] 2025-11-24 05:06:05,501 | INFO     | ***************************************
[2025-11-24 00:06:58] 2025-11-24 05:06:05,501 | INFO     | 
[2025-11-24 00:06:58] 2025-11-24 05:06:05,502 | INFO     | architecture information:
[2025-11-24 00:06:58] 2025-11-24 05:06:05,503 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:06:58] 2025-11-24 05:06:05,521 | INFO     | cat /etc/os-release:
[2025-11-24 00:06:58] NAME="CentOS Linux"
[2025-11-24 00:06:58] VERSION="7 (Core)"
[2025-11-24 00:06:58] ID="centos"
[2025-11-24 00:06:58] ID_LIKE="rhel fedora"
[2025-11-24 00:06:58] VERSION_ID="7"
[2025-11-24 00:06:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:06:58] ANSI_COLOR="0;31"
[2025-11-24 00:06:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:06:58] HOME_URL="https://www.centos.org/"
[2025-11-24 00:06:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:06:58] 
[2025-11-24 00:06:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:06:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:06:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:06:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:06:58] 
[2025-11-24 00:06:58] 2025-11-24 05:06:05,522 | INFO     | ***************************************
[2025-11-24 00:06:58] 2025-11-24 05:06:06,024 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 00:06:58] 2025-11-24 05:06:06,046 | INFO     | sufficient remaining disk space (18253611008 B)
[2025-11-24 00:06:58] 2025-11-24 05:06:06,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:06:58] 2025-11-24 05:06:06,047 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:06:58] 2025-11-24 05:06:06,047 | INFO     | update_server=False
[2025-11-24 00:06:58] 2025-11-24 05:06:06,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:06:58] 2025-11-24 05:06:06,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:06:58] 2025-11-24 05:06:06,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:06:58] 2025-11-24 05:06:06,101 | INFO     | all payload control threads have been joined
[2025-11-24 00:06:58] 2025-11-24 05:06:06,512 | INFO     | all data control threads have been joined
[2025-11-24 00:06:58] 2025-11-24 05:06:06,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:06:58] 2025-11-24 05:06:06,697 | INFO     | aborting loop
[2025-11-24 00:06:58] 2025-11-24 05:06:06,756 | INFO     | all job control threads have been joined
[2025-11-24 00:06:58] 2025-11-24 05:06:07,053 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:07,054 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:07,107 | INFO     | [payload] control thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:07,256 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:07,466 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:07,490 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:07,514 | INFO     | [data] control thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:07,699 | INFO     | [job] validate thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:07,702 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:07,723 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:07,757 | INFO     | [job] control thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:07,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:06:58] 2025-11-24 05:06:08,052 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:08,133 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:08,369 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:11,866 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:17,062 | INFO     | job.realtimelogging is not enabled
[2025-11-24 00:06:58] 2025-11-24 05:06:18,067 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:06:58] 2025-11-24 05:06:37,176 | INFO     | PID=16054 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 00:06:58] 2025-11-24 05:06:37,177 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:06:58] 2025-11-24 05:06:37,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:06:58] 2025-11-24 05:06:37,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:06:58] 2025-11-24 05:06:50,790 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:06:58] 2025-11-24 05:06:52,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140625910470464)>', '<ExcThread(monitor, started 140624871286528)>']
[2025-11-24 00:06:58] 2025-11-24 05:06:53,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:06:58] 2025-11-24 05:06:53,255 | INFO     | [monitor] control thread has ended
[2025-11-24 00:06:58] 2025-11-24 05:06:57,801 | INFO     | all workflow threads have been joined
[2025-11-24 00:06:58] 2025-11-24 05:06:57,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:06:58] 2025-11-24 05:06:57,803 | INFO     | traces error code: 0
[2025-11-24 00:06:58] 2025-11-24 05:06:57,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:06:58] 2025-11-24 05:06:57,938 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:06:58] 2025-11-24 05:06:57,944 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:06:58] 2025-11-24 05:06:57,949 [wrapper] pilotpid: 16054
[2025-11-24 00:06:58] 2025-11-24 05:06:57,954 [wrapper] Pilot exit status: 0
[2025-11-24 00:06:58] 2025-11-24 05:06:57,974 [wrapper] pandaids: 6894052139
[2025-11-24 00:06:58] 2025-11-24 05:06:58,033 [wrapper] cleanup supervisor_pilot 14432 16055
[2025-11-24 00:06:58] 2025-11-24 05:06:58,038 [wrapper] Test setup, not cleaning
[2025-11-24 00:06:58] 2025-11-24 05:06:58,043 [wrapper] apfmon messages muted
[2025-11-24 00:06:58] 2025-11-24 05:06:58,048 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:06:58] 2025-11-24 05:06:58,053 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:06:58]  *** Error codes and diagnostics ***
[2025-11-24 00:06:58]     "exeErrorCode": 0,
[2025-11-24 00:06:58]     "exeErrorDiag": "",
[2025-11-24 00:06:58]     "pilotErrorCode": 0,
[2025-11-24 00:06:58]     "pilotErrorDiag": "",
[2025-11-24 00:06:58]  *** Listing of results directory ***
[2025-11-24 00:06:58] total 620512
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 11:22 pilot3.tar.gz
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 11:42 queuedata.json
[2025-11-24 00:06:58] -rwx------ 1 boincer umatlas     36292 Nov 22 11:43 runpilot2-wrapper.sh
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas       100 Nov 23 19:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:06:58] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 19:23 run_atlas
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas       105 Nov 23 19:23 job.xml
[2025-11-24 00:06:58] -rw-r--r-- 2 boincer umatlas 302121022 Nov 23 19:23 EVNT.47523657._000005.pool.root.1
[2025-11-24 00:06:58] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 19:23 start_atlas.sh
[2025-11-24 00:06:58] drwxrwx--x 2 boincer umatlas      4096 Nov 23 19:23 shared
[2025-11-24 00:06:58] -rw-r--r-- 2 boincer umatlas    589947 Nov 23 19:23 input.tar.gz
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas         0 Nov 23 19:23 boinc_lockfile
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas      2614 Nov 23 19:23 pandaJob.out
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas        57 Nov 23 19:23 setup.sh.local
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas    989786 Nov 23 19:23 agis_schedconf.cvmfs.json
[2025-11-24 00:06:58] drwx------ 5 boincer umatlas      4096 Nov 23 19:23 pilot3
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas      5912 Nov 24 00:01 init_data.xml
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas 323703172 Nov 24 00:05 HITS.47523659._000113.pool.root.1
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas       531 Nov 24 00:05 boinc_task_state.xml
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas      1051 Nov 24 00:05 memory_monitor_summary.json
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas   1526164 Nov 24 00:05 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas    499272 Nov 24 00:05 log.47523659._000113.job.log.tgz.1
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas      7847 Nov 24 00:06 heartbeat.json
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas        95 Nov 24 00:06 pilot_heartbeat.json
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas        29 Nov 24 00:06 wrapper_checkpoint.txt
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 00:06 boinc_mmap_file
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas      4818 Nov 24 00:06 pilotlog.txt
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas   2328616 Nov 24 00:06 log.47523659._000113.job.log.1
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas       357 Nov 24 00:06 output.list
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas       620 Nov 24 00:06 runtime_log
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas   2846720 Nov 24 00:06 result.tar.gz
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 00:06 runtime_log.err
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas       664 Nov 24 00:06 8VDNDmFt5g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSCIKDmJzolLm.diag
[2025-11-24 00:06:58] -rw-r--r-- 1 boincer umatlas     21157 Nov 24 00:06 stderr.txt
[2025-11-24 00:06:58] HITS file was successfully produced:
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas 323703172 Nov 24 00:05 shared/HITS.pool.root.1
[2025-11-24 00:06:58]  *** Contents of shared directory: ***
[2025-11-24 00:06:58] total 614548
[2025-11-24 00:06:58] -rw-r--r-- 2 boincer umatlas 302121022 Nov 23 19:23 ATLAS.root_0
[2025-11-24 00:06:58] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 19:23 start_atlas.sh
[2025-11-24 00:06:58] -rw-r--r-- 2 boincer umatlas    589947 Nov 23 19:23 input.tar.gz
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas 323703172 Nov 24 00:05 HITS.pool.root.1
[2025-11-24 00:06:58] -rw------- 1 boincer umatlas   2846720 Nov 24 00:06 result.tar.gz
00:07:00 (12377): run_atlas exited; CPU time 127978.255127
00:07:00 (12377): called boinc_finish(0)

</stderr_txt>
]]>

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