Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:57:40 (22305): wrapper (7.7.26015): starting
22:57:40 (22305): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 22:57:40] Arguments: --nthreads 8
[2025-11-25 22:57:40] Threads: 8
[2025-11-25 22:57:40] Checking for CVMFS
[2025-11-25 22:57:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:57:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:57:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:57:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:57:43] 2.11.2.0 6477 284352 141532 153298 1 85 22365699 25165824 4632 130560 20 130206114 99.870 79626062 2616 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 22:57:43] CVMFS is ok
[2025-11-25 22:57:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:57:43] Checking for apptainer binary...
[2025-11-25 22:57:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:57:43] Running /usr/bin/apptainer --version
[2025-11-25 22:57:43] apptainer version 1.3.2-1.el7
[2025-11-25 22:57:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:57:46] cg-vwn261.simple-grid.lan
[2025-11-25 22:57:46] apptainer works
[2025-11-25 22:57:46] Set ATHENA_PROC_NUMBER=8
[2025-11-25 22:57:46] Set ATHENA_CORE_NUMBER=8
[2025-11-25 22:57:47] Starting ATLAS job with PandaID=6895344162
[2025-11-25 22:57:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:32:59]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:32:59] 2025-11-26 22:32:10,546 | INFO     | .. there are 9 such processes running
[2025-11-26 23:32:59] 2025-11-26 22:32:11,547 | INFO     | time since job start (88218s) is within the limit (172800.0s)
[2025-11-26 23:32:59] 2025-11-26 22:32:11,721 | INFO     | monitor loop #5944: job 0:6895344162 is in state 'finished'
[2025-11-26 23:32:59] 2025-11-26 22:32:11,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:32:59] 2025-11-26 22:32:13,554 | INFO     | time since job start (88220s) is within the limit (172800.0s)
[2025-11-26 23:32:59] 2025-11-26 22:32:14,226 | INFO     | monitor loop #5945: job 0:6895344162 is in state 'finished'
[2025-11-26 23:32:59] 2025-11-26 22:32:14,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:32:59] 2025-11-26 22:32:15,561 | INFO     | time since job start (88222s) is within the limit (172800.0s)
[2025-11-26 23:32:59] 2025-11-26 22:32:16,739 | INFO     | monitor loop #5946: job 0:6895344162 is in state 'finished'
[2025-11-26 23:32:59] 2025-11-26 22:32:16,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:32:59] 2025-11-26 22:32:17,567 | INFO     | time since job start (88224s) is within the limit (172800.0s)
[2025-11-26 23:32:59] 2025-11-26 22:32:19,246 | INFO     | monitor loop #5947: job 0:6895344162 is in state 'finished'
[2025-11-26 23:32:59] 2025-11-26 22:32:19,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:32:59] 2025-11-26 22:32:19,576 | INFO     | time since job start (88226s) is within the limit (172800.0s)
[2025-11-26 23:32:59] 2025-11-26 22:32:21,109 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 23:32:59] 2025-11-26 22:32:21,110 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 23:32:59] 2025-11-26 22:32:21,112 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6895344162/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:32:59] 2025-11-26 22:32:21,112 | INFO     | extracted standard info from prmon json
[2025-11-26 23:32:59] 2025-11-26 22:32:21,112 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:32:59] 2025-11-26 22:32:21,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:32:59] 2025-11-26 22:32:21,140 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:32:59] 2025-11-26 22:32:21,142 | INFO     | sum of square deviations: 918203737697.4247
[2025-11-26 23:32:59] 2025-11-26 22:32:21,231 | INFO     | sum of deviations: 4256421695422.258
[2025-11-26 23:32:59] 2025-11-26 22:32:21,232 | INFO     | mean x: 1764152432.6281338
[2025-11-26 23:32:59] 2025-11-26 22:32:21,232 | INFO     | mean y: 2829207.3300835653
[2025-11-26 23:32:59] 2025-11-26 22:32:21,232 | INFO     | intersect: -8175068986.703158
[2025-11-26 23:32:59] 2025-11-26 22:32:21,234 | INFO     | chi2: 26.509189138073268
[2025-11-26 23:32:59] 2025-11-26 22:32:21,236 | INFO     | sum of square deviations: 908646266536.0381
[2025-11-26 23:32:59] 2025-11-26 22:32:21,313 | INFO     | sum of deviations: 4735676929775.29
[2025-11-26 23:32:59] 2025-11-26 22:32:21,313 | INFO     | mean x: 1764152280.1320755
[2025-11-26 23:32:59] 2025-11-26 22:32:21,313 | INFO     | mean y: 2836853.6757512228
[2025-11-26 23:32:59] 2025-11-26 22:32:21,313 | INFO     | intersect: -9191560967.911068
[2025-11-26 23:32:59] 2025-11-26 22:32:21,315 | INFO     | chi2: 23.290501866148137
[2025-11-26 23:32:59] 2025-11-26 22:32:21,315 | INFO     | current chi2=23.290501866148137 (change=12.141779422827982 %)
[2025-11-26 23:32:59] 2025-11-26 22:32:21,315 | INFO     | right removable region: 1430
[2025-11-26 23:32:59] 2025-11-26 22:32:21,317 | INFO     | sum of square deviations: 908645278336.0375
[2025-11-26 23:32:59] 2025-11-26 22:32:21,378 | INFO     | sum of deviations: 3644626295385.5894
[2025-11-26 23:32:59] 2025-11-26 22:32:21,379 | INFO     | mean x: 1764152585.1320755
[2025-11-26 23:32:59] 2025-11-26 22:32:21,379 | INFO     | mean y: 2838968.1767994408
[2025-11-26 23:32:59] 2025-11-26 22:32:21,379 | INFO     | intersect: -7073274289.814497
[2025-11-26 23:32:59] 2025-11-26 22:32:21,381 | INFO     | chi2: 21.466283072332025
[2025-11-26 23:32:59] 2025-11-26 22:32:21,381 | INFO     | current chi2=21.466283072332025 (change=19.023237713817785 %)
[2025-11-26 23:32:59] 2025-11-26 22:32:21,381 | INFO     | left removable region: 10
[2025-11-26 23:32:59] 2025-11-26 22:32:21,383 | INFO     | sum of square deviations: 887851815176.8314
[2025-11-26 23:32:59] 2025-11-26 22:32:21,441 | INFO     | sum of deviations: 3671578805253.2627
[2025-11-26 23:32:59] 2025-11-26 22:32:21,442 | INFO     | mean x: 1764152554.640845
[2025-11-26 23:32:59] 2025-11-26 22:32:21,442 | INFO     | mean y: 2857331.716197183
[2025-11-26 23:32:59] 2025-11-26 22:32:21,442 | INFO     | intersect: -7292532527.4155
[2025-11-26 23:32:59] 2025-11-26 22:32:21,443 | INFO     | chi2: 13.419996044188792
[2025-11-26 23:32:59] 2025-11-26 22:32:21,444 | INFO     | current memory leak: 4.14 B/s (using 1420 data points, chi2=13.42)
[2025-11-26 23:32:59] 2025-11-26 22:32:21,445 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-26 23:32:59] 2025-11-26 22:32:21,445 | INFO     | ..............................
[2025-11-26 23:32:59] 2025-11-26 22:32:21,445 | INFO     | . Timing measurements:
[2025-11-26 23:32:59] 2025-11-26 22:32:21,445 | INFO     | . get job = 0 s
[2025-11-26 23:32:59] 2025-11-26 22:32:21,445 | INFO     | . initial setup = 11 s
[2025-11-26 23:32:59] 2025-11-26 22:32:21,446 | INFO     | . payload setup = 182 s
[2025-11-26 23:32:59] 2025-11-26 22:32:21,446 | INFO     | . stage-in = 0 s
[2025-11-26 23:32:59] 2025-11-26 22:32:21,446 | INFO     | . payload execution = 87742 s
[2025-11-26 23:32:59] 2025-11-26 22:32:21,446 | INFO     | . stage-out = 5 s
[2025-11-26 23:32:59] 2025-11-26 22:32:21,446 | INFO     | . log creation = 2 s
[2025-11-26 23:32:59] 2025-11-26 22:32:21,446 | INFO     | ..............................
[2025-11-26 23:32:59] 2025-11-26 22:32:21,554 | INFO     | 
[2025-11-26 23:32:59] 2025-11-26 22:32:21,554 | INFO     | job summary report
[2025-11-26 23:32:59] 2025-11-26 22:32:21,554 | INFO     | --------------------------------------------------
[2025-11-26 23:32:59] 2025-11-26 22:32:21,554 | INFO     | PanDA job id: 6895344162
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | task id: 47556137
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | errors: (none)
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | pilot state: finished 
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | transexitcode: 0
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | exeerrorcode: 0
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | exeerrordiag: 
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | exitcode: 0
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | exitmsg: OK
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | cpuconsumptiontime: 328229 s
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | nevents: 1000
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | neventsw: 0
[2025-11-26 23:32:59] 2025-11-26 22:32:21,555 | INFO     | pid: 32590
[2025-11-26 23:32:59] 2025-11-26 22:32:21,556 | INFO     | pgrp: 32590
[2025-11-26 23:32:59] 2025-11-26 22:32:21,556 | INFO     | corecount: 8
[2025-11-26 23:32:59] 2025-11-26 22:32:21,556 | INFO     | event service: False
[2025-11-26 23:32:59] 2025-11-26 22:32:21,556 | INFO     | sizes: {0: 2283436, 1: 2284178, 2: 2284320, 13: 2284320, 24: 2284376, 34: 2284404, 45: 2284560, 56: 2284588, 67: 2284616, 78: 2284644, 88: 2284700, 93: 2285270, 99
[2025-11-26 23:32:59] 2025-11-26 22:32:21,556 | INFO     | --------------------------------------------------
[2025-11-26 23:32:59] 2025-11-26 22:32:21,556 | INFO     | 
[2025-11-26 23:32:59] 2025-11-26 22:32:21,556 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-26 23:32:59] 2025-11-26 22:32:21,584 | INFO     | time since job start (88228s) is within the limit (172800.0s)
[2025-11-26 23:32:59] 2025-11-26 22:32:21,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,759 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,759 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,760 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:32:59] 2025-11-26 22:32:21,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:32:59] 2025-11-26 22:32:21,761 | INFO     | job 6895344162 has completed (purged errors)
[2025-11-26 23:32:59] 2025-11-26 22:32:21,761 | INFO     | overall cleanup function is called
[2025-11-26 23:32:59] 2025-11-26 22:32:22,779 | INFO     | --- collectZombieJob: --- 10, [32590]
[2025-11-26 23:32:59] 2025-11-26 22:32:22,779 | INFO     | zombie collector waiting for pid 32590
[2025-11-26 23:32:59] 2025-11-26 22:32:22,780 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:32:59] 2025-11-26 22:32:22,780 | INFO     | collected zombie processes
[2025-11-26 23:32:59] 2025-11-26 22:32:22,780 | INFO     | will attempt to kill all subprocesses of pid=32590
[2025-11-26 23:32:59] 2025-11-26 22:32:22,886 | INFO     | process IDs to be killed: [32590] (in reverse order)
[2025-11-26 23:32:59] 2025-11-26 22:32:23,348 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:32:59] 2025-11-26 22:32:23,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:32:59] 2025-11-26 22:32:23,352 | INFO     | did not find any defunct processes belonging to 32590
[2025-11-26 23:32:59] 2025-11-26 22:32:23,354 | INFO     | did not find any defunct processes belonging to 32590
[2025-11-26 23:32:59] 2025-11-26 22:32:23,400 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:32:59] 2025-11-26 22:32:23,400 | INFO     | ready for new job
[2025-11-26 23:32:59] 2025-11-26 22:32:23,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:32:59] 2025-11-26 22:32:23,405 | INFO     | ***************************************
[2025-11-26 23:32:59] 2025-11-26 22:32:23,405 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:32:59] 2025-11-26 22:32:23,405 | INFO     | ***************************************
[2025-11-26 23:32:59] 2025-11-26 22:32:23,405 | INFO     | 
[2025-11-26 23:32:59] 2025-11-26 22:32:23,406 | INFO     | pilot is running in a VM
[2025-11-26 23:32:59] 2025-11-26 22:32:23,406 | INFO     | architecture information:
[2025-11-26 23:32:59] 2025-11-26 22:32:23,424 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:32:59] 2025-11-26 22:32:23,583 | INFO     | cat /etc/os-release:
[2025-11-26 23:32:59] NAME="CentOS Linux"
[2025-11-26 23:32:59] VERSION="7 (Core)"
[2025-11-26 23:32:59] ID="centos"
[2025-11-26 23:32:59] ID_LIKE="rhel fedora"
[2025-11-26 23:32:59] VERSION_ID="7"
[2025-11-26 23:32:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:32:59] ANSI_COLOR="0;31"
[2025-11-26 23:32:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:32:59] HOME_URL="https://www.centos.org/"
[2025-11-26 23:32:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:32:59] 
[2025-11-26 23:32:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:32:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:32:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:32:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:32:59] 
[2025-11-26 23:32:59] 2025-11-26 22:32:23,584 | INFO     | ***************************************
[2025-11-26 23:32:59] 2025-11-26 22:32:24,087 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-26 23:32:59] 2025-11-26 22:32:24,329 | INFO     | sufficient remaining disk space (495838035968 B)
[2025-11-26 23:32:59] 2025-11-26 22:32:24,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:32:59] 2025-11-26 22:32:24,330 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:32:59] 2025-11-26 22:32:24,330 | INFO     | update_server=False
[2025-11-26 23:32:59] 2025-11-26 22:32:24,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:32:59] 2025-11-26 22:32:24,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:32:59] 2025-11-26 22:32:25,125 | INFO     | all data control threads have been joined
[2025-11-26 23:32:59] 2025-11-26 22:32:25,215 | INFO     | all job control threads have been joined
[2025-11-26 23:32:59] 2025-11-26 22:32:25,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:32:59] 2025-11-26 22:32:25,282 | INFO     | aborting loop
[2025-11-26 23:32:59] 2025-11-26 22:32:25,335 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:25,413 | INFO     | [job] validate thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:25,427 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:25,759 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:25,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:32:59] 2025-11-26 22:32:25,809 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:25,823 | INFO     | all payload control threads have been joined
[2025-11-26 23:32:59] 2025-11-26 22:32:25,928 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:25,997 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:26,131 | INFO     | [data] control thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:26,219 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:32:59] 2025-11-26 22:32:26,221 | INFO     | [job] control thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:26,287 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:26,337 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:26,419 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:26,472 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:26,568 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:32:59] 2025-11-26 22:32:26,829 | INFO     | [payload] control thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:27,574 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:29,791 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:32:59] 2025-11-26 22:32:30,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253948512064)>', '<ExcThread(monitor, started 140253297899264)>']
[2025-11-26 23:32:59] 2025-11-26 22:32:35,680 | INFO     | all workflow threads have been joined
[2025-11-26 23:32:59] 2025-11-26 22:32:35,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:32:59] 2025-11-26 22:32:35,681 | INFO     | traces error code: 0
[2025-11-26 23:32:59] 2025-11-26 22:32:35,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:32:59] 2025-11-26 22:32:51,220 [wrapper] supervise_pilot (15 min periods counter: 99)
[2025-11-26 23:32:59] 2025-11-26 22:32:54,727 | INFO     | PID=26056 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 23:32:59] 2025-11-26 22:32:54,728 | INFO     | .. there are 9 such processes running
[2025-11-26 23:32:59] 2025-11-26 22:32:54,728 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:32:59] 2025-11-26 22:32:54,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:32:59] 2025-11-26 22:32:54,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:32:59] 2025-11-26 22:32:54,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:32:59] 2025-11-26 22:32:54,728 | INFO     | [monitor] control thread has ended
[2025-11-26 23:32:59] 2025-11-26 22:32:54,958 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:32:59] 2025-11-26 22:32:54,992 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:32:59] 2025-11-26 22:32:55,074 [wrapper] pilotpid: 26056
[2025-11-26 23:32:59] 2025-11-26 22:32:55,148 [wrapper] Pilot exit status: 0
[2025-11-26 23:32:59] 2025-11-26 22:32:55,545 [wrapper] pandaids: 6895344162
[2025-11-26 23:32:59] 2025-11-26 22:32:56,317 [wrapper] cleanup supervisor_pilot 11354 26057
[2025-11-26 23:32:59] 2025-11-26 22:32:56,362 [wrapper] Test setup, not cleaning
[2025-11-26 23:32:59] 2025-11-26 22:32:56,413 [wrapper] apfmon messages muted
[2025-11-26 23:32:59] 2025-11-26 22:32:56,470 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:32:59] 2025-11-26 22:32:56,523 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:32:59]  *** Error codes and diagnostics ***
[2025-11-26 23:32:59]     "exeErrorCode": 0,
[2025-11-26 23:32:59]     "exeErrorDiag": "",
[2025-11-26 23:32:59]     "pilotErrorCode": 0,
[2025-11-26 23:32:59]     "pilotErrorDiag": "",
[2025-11-26 23:32:59]  *** Listing of results directory ***
[2025-11-26 23:32:59] total 1315232
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc    576529 Nov 22 17:22 pilot3.tar.gz
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc      5112 Nov 22 17:35 queuedata.json
[2025-11-26 23:32:59] -rwx------. 1 boinc boinc     36292 Nov 22 17:38 runpilot2-wrapper.sh
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc       100 Nov 25 22:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:32:59] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 22:57 run_atlas
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc       105 Nov 25 22:57 job.xml
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc      6391 Nov 25 22:57 init_data.xml
[2025-11-26 23:32:59] -rw-r--r--. 2 boinc boinc 410662607 Nov 25 22:57 EVNT.47483658._000435.pool.root.1
[2025-11-26 23:32:59] drwxrwx--x. 2 boinc boinc        68 Nov 25 22:57 shared
[2025-11-26 23:32:59] -rw-r--r--. 2 boinc boinc    590104 Nov 25 22:57 input.tar.gz
[2025-11-26 23:32:59] -rw-r--r--. 2 boinc boinc     15847 Nov 25 22:57 start_atlas.sh
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc         0 Nov 25 22:57 boinc_lockfile
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc      2785 Nov 25 22:57 pandaJob.out
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc    991893 Nov 25 23:01 agis_schedconf.cvmfs.json
[2025-11-26 23:32:59] drwx------. 5 boinc boinc      4096 Nov 25 23:01 pilot3
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc       533 Nov 26 23:10 boinc_task_state.xml
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc 903617846 Nov 26 23:29 HITS.47556137._004308.pool.root.1
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc      1031 Nov 26 23:30 memory_monitor_summary.json
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc   1516240 Nov 26 23:30 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc   2522784 Nov 26 23:30 log.47556137._004308.job.log.tgz.1
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc      8630 Nov 26 23:32 heartbeat.json
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc        95 Nov 26 23:32 pilot_heartbeat.json
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc      8192 Nov 26 23:32 boinc_mmap_file
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc        29 Nov 26 23:32 wrapper_checkpoint.txt
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc       820 Nov 26 23:32 pilotlog.txt
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc  11785282 Nov 26 23:32 log.47556137._004308.job.log.1
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc       353 Nov 26 23:32 output.list
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc       620 Nov 26 23:32 runtime_log
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc  14325760 Nov 26 23:32 result.tar.gz
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc       662 Nov 26 23:32 vWRMDm8n5g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJHKKDmsvufyn.diag
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc      8817 Nov 26 23:32 runtime_log.err
[2025-11-26 23:32:59] -rw-r--r--. 1 boinc boinc     21137 Nov 26 23:32 stderr.txt
[2025-11-26 23:32:59] HITS file was successfully produced:
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc 903617846 Nov 26 23:29 shared/HITS.pool.root.1
[2025-11-26 23:32:59]  *** Contents of shared directory: ***
[2025-11-26 23:32:59] total 1298068
[2025-11-26 23:32:59] -rw-r--r--. 2 boinc boinc 410662607 Nov 25 22:57 ATLAS.root_0
[2025-11-26 23:32:59] -rw-r--r--. 2 boinc boinc    590104 Nov 25 22:57 input.tar.gz
[2025-11-26 23:32:59] -rw-r--r--. 2 boinc boinc     15847 Nov 25 22:57 start_atlas.sh
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc 903617846 Nov 26 23:29 HITS.pool.root.1
[2025-11-26 23:32:59] -rw-------. 1 boinc boinc  14325760 Nov 26 23:32 result.tar.gz
23:33:00 (22305): run_atlas exited; CPU time 328865.688812
23:33:00 (22305): called boinc_finish(0)

</stderr_txt>
]]>

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