Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:40:41 (18448): wrapper (7.7.26015): starting
00:40:41 (18448): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:40:41] Arguments: --nthreads 8
[2025-11-26 00:40:41] Threads: 8
[2025-11-26 00:40:41] Checking for CVMFS
[2025-11-26 00:40:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:40:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:40:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:40:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:40:42] 2.11.2.0 2281 171408 133152 153302 3 181 19104725 25165825 4147 130560 12 55825997 99.890 29444769 2090 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 00:40:42] CVMFS is ok
[2025-11-26 00:40:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:40:42] Checking for apptainer binary...
[2025-11-26 00:40:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:40:42] Running /usr/bin/apptainer --version
[2025-11-26 00:40:42] apptainer version 1.3.2-1.el7
[2025-11-26 00:40:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:40:44] cg-vwn445.simple-grid.lan
[2025-11-26 00:40:44] apptainer works
[2025-11-26 00:40:44] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:40:44] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:40:44] Starting ATLAS job with PandaID=6895337534
[2025-11-26 00:40:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:07:43]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:07:43] 2025-11-26 23:06:50,157 | INFO     | monitor loop #5624: job 0:6895337534 is in state 'finished'
[2025-11-27 00:07:43] 2025-11-26 23:06:50,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:07:43] 2025-11-26 23:06:50,223 | INFO     | time since job start (84344s) is within the limit (172800.0s)
[2025-11-27 00:07:43] 2025-11-26 23:06:52,230 | INFO     | time since job start (84346s) is within the limit (172800.0s)
[2025-11-27 00:07:43] 2025-11-26 23:06:52,661 | INFO     | monitor loop #5625: job 0:6895337534 is in state 'finished'
[2025-11-27 00:07:43] 2025-11-26 23:06:52,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:07:43] 2025-11-26 23:06:54,243 | INFO     | time since job start (84348s) is within the limit (172800.0s)
[2025-11-27 00:07:43] 2025-11-26 23:06:55,166 | INFO     | monitor loop #5626: job 0:6895337534 is in state 'finished'
[2025-11-27 00:07:43] 2025-11-26 23:06:55,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:07:43] 2025-11-26 23:06:56,252 | INFO     | time since job start (84350s) is within the limit (172800.0s)
[2025-11-27 00:07:43] 2025-11-26 23:06:57,492 | INFO     | PID=22169 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 00:07:43] 2025-11-26 23:06:57,493 | INFO     | .. there are 9 such processes running
[2025-11-27 00:07:43] 2025-11-26 23:06:57,675 | INFO     | monitor loop #5627: job 0:6895337534 is in state 'finished'
[2025-11-27 00:07:43] 2025-11-26 23:06:57,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:07:43] 2025-11-26 23:06:58,493 | INFO     | time since job start (84352s) is within the limit (172800.0s)
[2025-11-27 00:07:43] 2025-11-26 23:06:59,729 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 00:07:43] 2025-11-26 23:06:59,730 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 00:07:43] 2025-11-26 23:06:59,732 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6895337534/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:07:43] 2025-11-26 23:06:59,733 | INFO     | extracted standard info from prmon json
[2025-11-27 00:07:43] 2025-11-26 23:06:59,733 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:07:43] 2025-11-26 23:06:59,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:07:43] 2025-11-26 23:06:59,759 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:07:43] 2025-11-26 23:06:59,762 | INFO     | sum of square deviations: 816690107726.4808
[2025-11-27 00:07:43] 2025-11-26 23:06:59,826 | INFO     | sum of deviations: 1595516624552.6216
[2025-11-27 00:07:43] 2025-11-26 23:06:59,826 | INFO     | mean x: 1764156217.057205
[2025-11-27 00:07:43] 2025-11-26 23:06:59,827 | INFO     | mean y: 2853315.093410572
[2025-11-27 00:07:43] 2025-11-26 23:06:59,827 | INFO     | intersect: -3443668867.5474052
[2025-11-27 00:07:43] 2025-11-26 23:06:59,828 | INFO     | chi2: 18.892570727356848
[2025-11-27 00:07:43] 2025-11-26 23:06:59,830 | INFO     | sum of square deviations: 807851950090.8666
[2025-11-27 00:07:43] 2025-11-26 23:06:59,888 | INFO     | sum of deviations: 2055546520599.665
[2025-11-27 00:07:43] 2025-11-26 23:06:59,888 | INFO     | mean x: 1764156064.5610466
[2025-11-27 00:07:43] 2025-11-26 23:06:59,888 | INFO     | mean y: 2861251.206395349
[2025-11-27 00:07:43] 2025-11-26 23:06:59,888 | INFO     | intersect: -4485962301.048907
[2025-11-27 00:07:43] 2025-11-26 23:06:59,890 | INFO     | chi2: 15.580140495783725
[2025-11-27 00:07:43] 2025-11-26 23:06:59,890 | INFO     | current chi2=15.580140495783725 (change=17.53297780050998 %)
[2025-11-27 00:07:43] 2025-11-26 23:06:59,890 | INFO     | right removable region: 1375
[2025-11-27 00:07:43] 2025-11-26 23:06:59,892 | INFO     | sum of square deviations: 807851059490.8676
[2025-11-27 00:07:43] 2025-11-26 23:06:59,951 | INFO     | sum of deviations: 1159733251843.6135
[2025-11-27 00:07:43] 2025-11-26 23:06:59,952 | INFO     | mean x: 1764156369.5610466
[2025-11-27 00:07:43] 2025-11-26 23:06:59,952 | INFO     | mean y: 2860830.7129360465
[2025-11-27 00:07:43] 2025-11-26 23:06:59,952 | INFO     | intersect: -2529723337.1175513
[2025-11-27 00:07:43] 2025-11-26 23:06:59,954 | INFO     | chi2: 16.302002682252475
[2025-11-27 00:07:43] 2025-11-26 23:06:59,954 | INFO     | current chi2=16.302002682252475 (change=13.712099229318616 %)
[2025-11-27 00:07:43] 2025-11-26 23:06:59,954 | INFO     | left removable region: 10
[2025-11-27 00:07:43] 2025-11-26 23:06:59,956 | INFO     | sum of square deviations: 788631512784.9338
[2025-11-27 00:07:43] 2025-11-26 23:07:00,039 | INFO     | sum of deviations: 1586398983471.2
[2025-11-27 00:07:43] 2025-11-26 23:07:00,040 | INFO     | mean x: 1764156339.0666666
[2025-11-27 00:07:43] 2025-11-26 23:07:00,040 | INFO     | mean y: 2872833.9098901097
[2025-11-27 00:07:43] 2025-11-26 23:07:00,040 | INFO     | intersect: -3545876838.9209614
[2025-11-27 00:07:43] 2025-11-26 23:07:00,042 | INFO     | chi2: 12.00135972592864
[2025-11-27 00:07:43] 2025-11-26 23:07:00,042 | INFO     | current memory leak: 2.01 B/s (using 1365 data points, chi2=12.00)
[2025-11-27 00:07:43] 2025-11-26 23:07:00,043 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 00:07:43] 2025-11-26 23:07:00,043 | INFO     | ..............................
[2025-11-27 00:07:43] 2025-11-26 23:07:00,043 | INFO     | . Timing measurements:
[2025-11-27 00:07:43] 2025-11-26 23:07:00,043 | INFO     | . get job = 0 s
[2025-11-27 00:07:43] 2025-11-26 23:07:00,044 | INFO     | . initial setup = 1 s
[2025-11-27 00:07:43] 2025-11-26 23:07:00,044 | INFO     | . payload setup = 12 s
[2025-11-27 00:07:43] 2025-11-26 23:07:00,044 | INFO     | . stage-in = 0 s
[2025-11-27 00:07:43] 2025-11-26 23:07:00,044 | INFO     | . payload execution = 84221 s
[2025-11-27 00:07:43] 2025-11-26 23:07:00,044 | INFO     | . stage-out = 5 s
[2025-11-27 00:07:43] 2025-11-26 23:07:00,044 | INFO     | . log creation = 1 s
[2025-11-27 00:07:43] 2025-11-26 23:07:00,044 | INFO     | ..............................
[2025-11-27 00:07:43] 2025-11-26 23:07:00,351 | INFO     | 
[2025-11-27 00:07:43] 2025-11-26 23:07:00,351 | INFO     | job summary report
[2025-11-27 00:07:43] 2025-11-26 23:07:00,351 | INFO     | --------------------------------------------------
[2025-11-27 00:07:43] 2025-11-26 23:07:00,351 | INFO     | PanDA job id: 6895337534
[2025-11-27 00:07:43] 2025-11-26 23:07:00,351 | INFO     | task id: 47556137
[2025-11-27 00:07:43] 2025-11-26 23:07:00,351 | INFO     | errors: (none)
[2025-11-27 00:07:43] 2025-11-26 23:07:00,352 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:07:43] 2025-11-26 23:07:00,352 | INFO     | pilot state: finished 
[2025-11-27 00:07:43] 2025-11-26 23:07:00,352 | INFO     | transexitcode: 0
[2025-11-27 00:07:43] 2025-11-26 23:07:00,352 | INFO     | exeerrorcode: 0
[2025-11-27 00:07:43] 2025-11-26 23:07:00,352 | INFO     | exeerrordiag: 
[2025-11-27 00:07:43] 2025-11-26 23:07:00,352 | INFO     | exitcode: 0
[2025-11-27 00:07:43] 2025-11-26 23:07:00,352 | INFO     | exitmsg: OK
[2025-11-27 00:07:43] 2025-11-26 23:07:00,352 | INFO     | cpuconsumptiontime: 320661 s
[2025-11-27 00:07:43] 2025-11-26 23:07:00,352 | INFO     | nevents: 1000
[2025-11-27 00:07:43] 2025-11-26 23:07:00,352 | INFO     | neventsw: 0
[2025-11-27 00:07:43] 2025-11-26 23:07:00,352 | INFO     | pid: 28636
[2025-11-27 00:07:43] 2025-11-26 23:07:00,352 | INFO     | pgrp: 28636
[2025-11-27 00:07:43] 2025-11-26 23:07:00,353 | INFO     | corecount: 8
[2025-11-27 00:07:43] 2025-11-26 23:07:00,353 | INFO     | event service: False
[2025-11-27 00:07:43] 2025-11-26 23:07:00,353 | INFO     | sizes: {0: 2284093, 1: 2284292, 2: 2284292, 10: 2284582, 12: 2284610, 84235: 2344067, 84241: 2353063, 84242: 2353119, 84335: 2353365}
[2025-11-27 00:07:43] 2025-11-26 23:07:00,353 | INFO     | --------------------------------------------------
[2025-11-27 00:07:43] 2025-11-26 23:07:00,353 | INFO     | 
[2025-11-27 00:07:43] 2025-11-26 23:07:00,353 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-11-27 00:07:43] 2025-11-26 23:07:00,499 | INFO     | time since job start (84354s) is within the limit (172800.0s)
[2025-11-27 00:07:43] 2025-11-26 23:07:00,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,687 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,687 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,688 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:07:43] 2025-11-26 23:07:00,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,688 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:07:43] 2025-11-26 23:07:00,689 | INFO     | job 6895337534 has completed (purged errors)
[2025-11-27 00:07:43] 2025-11-26 23:07:00,689 | INFO     | overall cleanup function is called
[2025-11-27 00:07:43] 2025-11-26 23:07:01,711 | INFO     | --- collectZombieJob: --- 10, [28636]
[2025-11-27 00:07:43] 2025-11-26 23:07:01,711 | INFO     | zombie collector waiting for pid 28636
[2025-11-27 00:07:43] 2025-11-26 23:07:01,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:07:43] 2025-11-26 23:07:01,712 | INFO     | collected zombie processes
[2025-11-27 00:07:43] 2025-11-26 23:07:01,712 | INFO     | will attempt to kill all subprocesses of pid=28636
[2025-11-27 00:07:43] 2025-11-26 23:07:01,835 | INFO     | process IDs to be killed: [28636] (in reverse order)
[2025-11-27 00:07:43] 2025-11-26 23:07:02,615 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:07:43] 2025-11-26 23:07:02,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:07:43] 2025-11-26 23:07:02,619 | INFO     | did not find any defunct processes belonging to 28636
[2025-11-27 00:07:43] 2025-11-26 23:07:02,622 | INFO     | did not find any defunct processes belonging to 28636
[2025-11-27 00:07:43] 2025-11-26 23:07:02,672 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:07:43] 2025-11-26 23:07:02,673 | INFO     | ready for new job
[2025-11-27 00:07:43] 2025-11-26 23:07:02,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:07:43] 2025-11-26 23:07:02,678 | INFO     | ***************************************
[2025-11-27 00:07:43] 2025-11-26 23:07:02,678 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:07:43] 2025-11-26 23:07:02,678 | INFO     | ***************************************
[2025-11-27 00:07:43] 2025-11-26 23:07:02,678 | INFO     | 
[2025-11-27 00:07:43] 2025-11-26 23:07:02,679 | INFO     | pilot is running in a VM
[2025-11-27 00:07:43] 2025-11-26 23:07:02,679 | INFO     | architecture information:
[2025-11-27 00:07:43] 2025-11-26 23:07:02,685 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:07:43] 2025-11-26 23:07:02,771 | INFO     | cat /etc/os-release:
[2025-11-27 00:07:43] NAME="CentOS Linux"
[2025-11-27 00:07:43] VERSION="7 (Core)"
[2025-11-27 00:07:43] ID="centos"
[2025-11-27 00:07:43] ID_LIKE="rhel fedora"
[2025-11-27 00:07:43] VERSION_ID="7"
[2025-11-27 00:07:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:07:43] ANSI_COLOR="0;31"
[2025-11-27 00:07:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:07:43] HOME_URL="https://www.centos.org/"
[2025-11-27 00:07:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:07:43] 
[2025-11-27 00:07:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:07:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:07:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:07:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:07:43] 
[2025-11-27 00:07:43] 2025-11-26 23:07:02,772 | INFO     | ***************************************
[2025-11-27 00:07:43] 2025-11-26 23:07:03,275 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-11-27 00:07:43] 2025-11-26 23:07:03,417 | INFO     | sufficient remaining disk space (495204696064 B)
[2025-11-27 00:07:43] 2025-11-26 23:07:03,417 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:07:43] 2025-11-26 23:07:03,417 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:07:43] 2025-11-26 23:07:03,417 | INFO     | update_server=False
[2025-11-27 00:07:43] 2025-11-26 23:07:03,417 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:07:43] 2025-11-26 23:07:03,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:07:43] 2025-11-26 23:07:03,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:07:43] 2025-11-26 23:07:03,694 | INFO     | aborting loop
[2025-11-27 00:07:43] 2025-11-26 23:07:03,738 | INFO     | all job control threads have been joined
[2025-11-27 00:07:43] 2025-11-26 23:07:04,057 | INFO     | all payload control threads have been joined
[2025-11-27 00:07:43] 2025-11-26 23:07:04,250 | INFO     | all data control threads have been joined
[2025-11-27 00:07:43] 2025-11-26 23:07:04,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:07:43] 2025-11-26 23:07:04,423 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:04,700 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:04,703 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:04,744 | INFO     | [job] control thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:05,063 | INFO     | [payload] control thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:05,100 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:05,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:07:43] 2025-11-26 23:07:05,248 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:05,255 | INFO     | [data] control thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:05,659 | INFO     | [job] validate thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:05,701 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:05,794 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:05,861 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:05,881 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:06,165 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:06,386 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:07,427 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:07:43] 2025-11-26 23:07:33,468 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:07:43] 2025-11-26 23:07:33,703 | INFO     | PID=22169 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 00:07:43] 2025-11-26 23:07:33,703 | INFO     | .. there are 9 such processes running
[2025-11-27 00:07:43] 2025-11-26 23:07:33,703 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:07:43] 2025-11-26 23:07:33,703 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:07:43] 2025-11-26 23:07:33,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:07:43] 2025-11-26 23:07:33,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247558686528)>', '<ExcThread(monitor, started 140246964487936)>']
[2025-11-27 00:07:43] 2025-11-26 23:07:34,709 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:07:43] 2025-11-26 23:07:34,709 | INFO     | [monitor] control thread has ended
[2025-11-27 00:07:43] 2025-11-26 23:07:38,838 | INFO     | all workflow threads have been joined
[2025-11-27 00:07:43] 2025-11-26 23:07:38,838 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:07:43] 2025-11-26 23:07:38,838 | INFO     | traces error code: 0
[2025-11-27 00:07:43] 2025-11-26 23:07:38,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:07:43] 2025-11-26 23:07:39,318 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:07:43] 2025-11-26 23:07:39,431 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:07:43] 2025-11-26 23:07:39,496 [wrapper] pilotpid: 22169
[2025-11-27 00:07:43] 2025-11-26 23:07:39,596 [wrapper] Pilot exit status: 0
[2025-11-27 00:07:43] 2025-11-26 23:07:39,897 [wrapper] pandaids: 6895337534
[2025-11-27 00:07:43] 2025-11-26 23:07:40,459 [wrapper] cleanup supervisor_pilot 28709 22170
[2025-11-27 00:07:43] 2025-11-26 23:07:40,533 [wrapper] Test setup, not cleaning
[2025-11-27 00:07:43] 2025-11-26 23:07:40,630 [wrapper] apfmon messages muted
[2025-11-27 00:07:43] 2025-11-26 23:07:40,713 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:07:43] 2025-11-26 23:07:40,767 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:07:43]  *** Error codes and diagnostics ***
[2025-11-27 00:07:43]     "exeErrorCode": 0,
[2025-11-27 00:07:43]     "exeErrorDiag": "",
[2025-11-27 00:07:43]     "pilotErrorCode": 0,
[2025-11-27 00:07:43]     "pilotErrorDiag": "",
[2025-11-27 00:07:43]  *** Listing of results directory ***
[2025-11-27 00:07:43] total 1338272
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc    576529 Nov 22 08:52 pilot3.tar.gz
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc      5112 Nov 22 09:14 queuedata.json
[2025-11-27 00:07:43] -rwx------. 1 boinc boinc     36292 Nov 22 09:16 runpilot2-wrapper.sh
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc       100 Nov 26 00:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:07:43] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 00:40 run_atlas
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc       105 Nov 26 00:40 job.xml
[2025-11-27 00:07:43] -rw-r--r--. 2 boinc boinc 410078322 Nov 26 00:40 EVNT.47483658._000311.pool.root.1
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc      6393 Nov 26 00:40 init_data.xml
[2025-11-27 00:07:43] -rw-r--r--. 2 boinc boinc     15847 Nov 26 00:40 start_atlas.sh
[2025-11-27 00:07:43] drwxrwx--x. 2 boinc boinc        68 Nov 26 00:40 shared
[2025-11-27 00:07:43] -rw-r--r--. 2 boinc boinc    590101 Nov 26 00:40 input.tar.gz
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc         0 Nov 26 00:40 boinc_lockfile
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc      2784 Nov 26 00:40 pandaJob.out
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc    991877 Nov 26 00:41 agis_schedconf.cvmfs.json
[2025-11-27 00:07:43] drwx------. 5 boinc boinc      4096 Nov 26 00:41 pilot3
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc       533 Nov 26 23:38 boinc_task_state.xml
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc 928983575 Nov 27 00:04 HITS.47556137._003079.pool.root.1
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc      1030 Nov 27 00:05 memory_monitor_summary.json
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc   1516240 Nov 27 00:05 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc   2472242 Nov 27 00:05 log.47556137._003079.job.log.tgz.1
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc        95 Nov 27 00:06 pilot_heartbeat.json
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc      7941 Nov 27 00:07 heartbeat.json
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc        29 Nov 27 00:07 wrapper_checkpoint.txt
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc      8192 Nov 27 00:07 boinc_mmap_file
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc      4885 Nov 27 00:07 pilotlog.txt
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc  11244495 Nov 27 00:07 log.47556137._003079.job.log.1
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc       353 Nov 27 00:07 output.list
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc       620 Nov 27 00:07 runtime_log
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc  13731840 Nov 27 00:07 result.tar.gz
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc      8833 Nov 27 00:07 runtime_log.err
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc       662 Nov 27 00:07 piXMDmZyxg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmN3JKDmcIo7Vm.diag
[2025-11-27 00:07:43] -rw-r--r--. 1 boinc boinc     21418 Nov 27 00:07 stderr.txt
[2025-11-27 00:07:43] HITS file was successfully produced:
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc 928983575 Nov 27 00:04 shared/HITS.pool.root.1
[2025-11-27 00:07:43]  *** Contents of shared directory: ***
[2025-11-27 00:07:43] total 1321688
[2025-11-27 00:07:43] -rw-r--r--. 2 boinc boinc 410078322 Nov 26 00:40 ATLAS.root_0
[2025-11-27 00:07:43] -rw-r--r--. 2 boinc boinc     15847 Nov 26 00:40 start_atlas.sh
[2025-11-27 00:07:43] -rw-r--r--. 2 boinc boinc    590101 Nov 26 00:40 input.tar.gz
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc 928983575 Nov 27 00:04 HITS.pool.root.1
[2025-11-27 00:07:43] -rw-------. 1 boinc boinc  13731840 Nov 27 00:07 result.tar.gz
00:07:44 (18448): run_atlas exited; CPU time 321251.068648
00:07:44 (18448): called boinc_finish(0)

</stderr_txt>
]]>

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