Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:15:17 (9464): wrapper (7.7.26015): starting
01:15:17 (9464): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 01:15:17] Arguments: --nthreads 8
[2025-11-26 01:15:17] Threads: 8
[2025-11-26 01:15:17] Checking for CVMFS
[2025-11-26 01:15:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 01:15:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 01:15:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 01:15:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 01:15:20] 2.11.2.0 11156 284490 141912 153303 2 14 25127042 25165825 4632 130560 14 140764710 99.878 77665576 2549 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 01:15:20] CVMFS is ok
[2025-11-26 01:15:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 01:15:20] Checking for apptainer binary...
[2025-11-26 01:15:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 01:15:20] Running /usr/bin/apptainer --version
[2025-11-26 01:15:20] apptainer version 1.3.2-1.el7
[2025-11-26 01:15:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 01:15:25] cg-vwn264.simple-grid.lan
[2025-11-26 01:15:25] apptainer works
[2025-11-26 01:15:25] Set ATHENA_PROC_NUMBER=8
[2025-11-26 01:15:25] Set ATHENA_CORE_NUMBER=8
[2025-11-26 01:15:25] Starting ATLAS job with PandaID=6895346892
[2025-11-26 01:15:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:14:58]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:14:58] 2025-11-26 22:13:47,162 | INFO     | time since job start (78854s) is within the limit (172800.0s)
[2025-11-26 23:14:58] 2025-11-26 22:13:48,411 | INFO     | monitor loop #5332: job 0:6895346892 is in state 'finished'
[2025-11-26 23:14:58] 2025-11-26 22:13:48,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:14:58] 2025-11-26 22:13:49,168 | INFO     | time since job start (78856s) is within the limit (172800.0s)
[2025-11-26 23:14:58] 2025-11-26 22:13:50,923 | INFO     | monitor loop #5333: job 0:6895346892 is in state 'finished'
[2025-11-26 23:14:58] 2025-11-26 22:13:50,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:14:58] 2025-11-26 22:13:51,174 | INFO     | time since job start (78858s) is within the limit (172800.0s)
[2025-11-26 23:14:58] 2025-11-26 22:13:52,418 | INFO     | PID=13279 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 23:14:58] 2025-11-26 22:13:52,418 | INFO     | .. there are 9 such processes running
[2025-11-26 23:14:58] 2025-11-26 22:13:53,418 | INFO     | time since job start (78860s) is within the limit (172800.0s)
[2025-11-26 23:14:58] 2025-11-26 22:13:53,430 | INFO     | monitor loop #5334: job 0:6895346892 is in state 'finished'
[2025-11-26 23:14:58] 2025-11-26 22:13:53,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:14:58] 2025-11-26 22:13:55,426 | INFO     | time since job start (78862s) is within the limit (172800.0s)
[2025-11-26 23:14:58] 2025-11-26 22:13:55,937 | INFO     | monitor loop #5335: job 0:6895346892 is in state 'finished'
[2025-11-26 23:14:58] 2025-11-26 22:13:55,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:14:58] 2025-11-26 22:13:57,044 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 23:14:58] 2025-11-26 22:13:57,044 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 23:14:58] 2025-11-26 22:13:57,051 | INFO     | using path: /var/lib/boinc/slots/27/PanDA_Pilot-6895346892/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:14:58] 2025-11-26 22:13:57,052 | INFO     | extracted standard info from prmon json
[2025-11-26 23:14:58] 2025-11-26 22:13:57,052 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:14:58] 2025-11-26 22:13:57,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:14:58] 2025-11-26 22:13:57,084 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:14:58] 2025-11-26 22:13:57,085 | INFO     | sum of square deviations: 654869702654.657
[2025-11-26 23:14:58] 2025-11-26 22:13:57,199 | INFO     | sum of deviations: 3092943744795.802
[2025-11-26 23:14:58] 2025-11-26 22:13:57,200 | INFO     | mean x: 1764156029.016368
[2025-11-26 23:14:58] 2025-11-26 22:13:57,200 | INFO     | mean y: 2808185.3904910367
[2025-11-26 23:14:58] 2025-11-26 22:13:57,200 | INFO     | intersect: -8329284951.108459
[2025-11-26 23:14:58] 2025-11-26 22:13:57,201 | INFO     | chi2: 29.229138262929865
[2025-11-26 23:14:58] 2025-11-26 22:13:57,203 | INFO     | sum of square deviations: 647243529466.9703
[2025-11-26 23:14:58] 2025-11-26 22:13:57,296 | INFO     | sum of deviations: 3525684789499.3457
[2025-11-26 23:14:58] 2025-11-26 22:13:57,296 | INFO     | mean x: 1764155876.5203443
[2025-11-26 23:14:58] 2025-11-26 22:13:57,296 | INFO     | mean y: 2816837.10172144
[2025-11-26 23:14:58] 2025-11-26 22:13:57,296 | INFO     | intersect: -9606947118.78665
[2025-11-26 23:14:58] 2025-11-26 22:13:57,298 | INFO     | chi2: 25.824783402916278
[2025-11-26 23:14:58] 2025-11-26 22:13:57,298 | INFO     | current chi2=25.824783402916278 (change=11.647127018900836 %)
[2025-11-26 23:14:58] 2025-11-26 22:13:57,298 | INFO     | right removable region: 1277
[2025-11-26 23:14:58] 2025-11-26 22:13:57,300 | INFO     | sum of square deviations: 647242734026.9712
[2025-11-26 23:14:58] 2025-11-26 22:13:57,367 | INFO     | sum of deviations: 2551039060876.124
[2025-11-26 23:14:58] 2025-11-26 22:13:57,367 | INFO     | mean x: 1764156181.5203443
[2025-11-26 23:14:58] 2025-11-26 22:13:57,368 | INFO     | mean y: 2819020.629890454
[2025-11-26 23:14:58] 2025-11-26 22:13:57,368 | INFO     | intersect: -6950416746.952989
[2025-11-26 23:14:58] 2025-11-26 22:13:57,369 | INFO     | chi2: 24.234082578919253
[2025-11-26 23:14:58] 2025-11-26 22:13:57,369 | INFO     | current chi2=24.234082578919253 (change=17.08930191194052 %)
[2025-11-26 23:14:58] 2025-11-26 22:13:57,369 | INFO     | left removable region: 10
[2025-11-26 23:14:58] 2025-11-26 22:13:57,371 | INFO     | sum of square deviations: 630673269397.9192
[2025-11-26 23:14:58] 2025-11-26 22:13:57,444 | INFO     | time since job start (78864s) is within the limit (172800.0s)
[2025-11-26 23:14:58] 2025-11-26 22:13:57,447 | INFO     | sum of deviations: 2578577377742.8516
[2025-11-26 23:14:58] 2025-11-26 22:13:57,448 | INFO     | mean x: 1764156151.029203
[2025-11-26 23:14:58] 2025-11-26 22:13:57,448 | INFO     | mean y: 2839678.1120757693
[2025-11-26 23:14:58] 2025-11-26 22:13:57,448 | INFO     | intersect: -7210107758.510031
[2025-11-26 23:14:58] 2025-11-26 22:13:57,449 | INFO     | chi2: 15.958795198178121
[2025-11-26 23:14:58] 2025-11-26 22:13:57,449 | INFO     | current memory leak: 4.09 B/s (using 1267 data points, chi2=15.96)
[2025-11-26 23:14:58] 2025-11-26 22:13:57,451 | INFO     | could have reported an average CPU frequency of 1999 MHz (44 samples)
[2025-11-26 23:14:58] 2025-11-26 22:13:57,451 | INFO     | ..............................
[2025-11-26 23:14:58] 2025-11-26 22:13:57,451 | INFO     | . Timing measurements:
[2025-11-26 23:14:58] 2025-11-26 22:13:57,451 | INFO     | . get job = 0 s
[2025-11-26 23:14:58] 2025-11-26 22:13:57,451 | INFO     | . initial setup = 15 s
[2025-11-26 23:14:58] 2025-11-26 22:13:57,451 | INFO     | . payload setup = 184 s
[2025-11-26 23:14:58] 2025-11-26 22:13:57,451 | INFO     | . stage-in = 0 s
[2025-11-26 23:14:58] 2025-11-26 22:13:57,451 | INFO     | . payload execution = 78370 s
[2025-11-26 23:14:58] 2025-11-26 22:13:57,451 | INFO     | . stage-out = 5 s
[2025-11-26 23:14:58] 2025-11-26 22:13:57,451 | INFO     | . log creation = 2 s
[2025-11-26 23:14:58] 2025-11-26 22:13:57,451 | INFO     | ..............................
[2025-11-26 23:14:58] 2025-11-26 22:13:57,591 | INFO     | 
[2025-11-26 23:14:58] 2025-11-26 22:13:57,592 | INFO     | job summary report
[2025-11-26 23:14:58] 2025-11-26 22:13:57,592 | INFO     | --------------------------------------------------
[2025-11-26 23:14:58] 2025-11-26 22:13:57,592 | INFO     | PanDA job id: 6895346892
[2025-11-26 23:14:58] 2025-11-26 22:13:57,592 | INFO     | task id: 47556137
[2025-11-26 23:14:58] 2025-11-26 22:13:57,592 | INFO     | errors: (none)
[2025-11-26 23:14:58] 2025-11-26 22:13:57,592 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:14:58] 2025-11-26 22:13:57,592 | INFO     | pilot state: finished 
[2025-11-26 23:14:58] 2025-11-26 22:13:57,592 | INFO     | transexitcode: 0
[2025-11-26 23:14:58] 2025-11-26 22:13:57,592 | INFO     | exeerrorcode: 0
[2025-11-26 23:14:58] 2025-11-26 22:13:57,592 | INFO     | exeerrordiag: 
[2025-11-26 23:14:58] 2025-11-26 22:13:57,592 | INFO     | exitcode: 0
[2025-11-26 23:14:58] 2025-11-26 22:13:57,592 | INFO     | exitmsg: OK
[2025-11-26 23:14:58] 2025-11-26 22:13:57,593 | INFO     | cpuconsumptiontime: 326453 s
[2025-11-26 23:14:58] 2025-11-26 22:13:57,593 | INFO     | nevents: 1000
[2025-11-26 23:14:58] 2025-11-26 22:13:57,593 | INFO     | neventsw: 0
[2025-11-26 23:14:58] 2025-11-26 22:13:57,593 | INFO     | pid: 19853
[2025-11-26 23:14:58] 2025-11-26 22:13:57,593 | INFO     | pgrp: 19853
[2025-11-26 23:14:58] 2025-11-26 22:13:57,593 | INFO     | corecount: 8
[2025-11-26 23:14:58] 2025-11-26 22:13:57,593 | INFO     | event service: False
[2025-11-26 23:14:58] 2025-11-26 22:13:57,593 | INFO     | sizes: {0: 2284093, 1: 2284292, 12: 2284292, 23: 2284320, 33: 2284348, 44: 2284404, 55: 2284560, 66: 2284588, 76: 2284616, 87: 2284934, 98: 2284962, 78558: 2342668
[2025-11-26 23:14:58] 2025-11-26 22:13:57,593 | INFO     | --------------------------------------------------
[2025-11-26 23:14:58] 2025-11-26 22:13:57,593 | INFO     | 
[2025-11-26 23:14:58] 2025-11-26 22:13:57,593 | INFO     | executing command: ls -lF /var/lib/boinc/slots/27
[2025-11-26 23:14:58] 2025-11-26 22:13:57,944 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,944 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,944 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,944 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,946 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:14:58] 2025-11-26 22:13:57,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,946 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:14:58] 2025-11-26 22:13:57,946 | INFO     | job 6895346892 has completed (purged errors)
[2025-11-26 23:14:58] 2025-11-26 22:13:57,946 | INFO     | overall cleanup function is called
[2025-11-26 23:14:58] 2025-11-26 22:13:58,966 | INFO     | --- collectZombieJob: --- 10, [19853]
[2025-11-26 23:14:58] 2025-11-26 22:13:58,967 | INFO     | zombie collector waiting for pid 19853
[2025-11-26 23:14:58] 2025-11-26 22:13:58,967 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:14:58] 2025-11-26 22:13:58,967 | INFO     | collected zombie processes
[2025-11-26 23:14:58] 2025-11-26 22:13:58,967 | INFO     | will attempt to kill all subprocesses of pid=19853
[2025-11-26 23:14:58] 2025-11-26 22:13:59,084 | INFO     | process IDs to be killed: [19853] (in reverse order)
[2025-11-26 23:14:58] 2025-11-26 22:14:00,197 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:14:58] 2025-11-26 22:14:00,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:14:58] 2025-11-26 22:14:00,200 | INFO     | did not find any defunct processes belonging to 19853
[2025-11-26 23:14:58] 2025-11-26 22:14:00,203 | INFO     | did not find any defunct processes belonging to 19853
[2025-11-26 23:14:58] 2025-11-26 22:14:00,275 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:14:58] 2025-11-26 22:14:00,276 | INFO     | ready for new job
[2025-11-26 23:14:58] 2025-11-26 22:14:00,276 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:14:58] 2025-11-26 22:14:00,281 | INFO     | ***************************************
[2025-11-26 23:14:58] 2025-11-26 22:14:00,281 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:14:58] 2025-11-26 22:14:00,281 | INFO     | ***************************************
[2025-11-26 23:14:58] 2025-11-26 22:14:00,281 | INFO     | 
[2025-11-26 23:14:58] 2025-11-26 22:14:00,281 | INFO     | pilot is running in a VM
[2025-11-26 23:14:58] 2025-11-26 22:14:00,282 | INFO     | architecture information:
[2025-11-26 23:14:58] 2025-11-26 22:14:00,296 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:14:58] 2025-11-26 22:14:00,625 | INFO     | cat /etc/os-release:
[2025-11-26 23:14:58] NAME="CentOS Linux"
[2025-11-26 23:14:58] VERSION="7 (Core)"
[2025-11-26 23:14:58] ID="centos"
[2025-11-26 23:14:58] ID_LIKE="rhel fedora"
[2025-11-26 23:14:58] VERSION_ID="7"
[2025-11-26 23:14:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:14:58] ANSI_COLOR="0;31"
[2025-11-26 23:14:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:14:58] HOME_URL="https://www.centos.org/"
[2025-11-26 23:14:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:14:58] 
[2025-11-26 23:14:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:14:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:14:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:14:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:14:58] 
[2025-11-26 23:14:58] 2025-11-26 22:14:00,625 | INFO     | ***************************************
[2025-11-26 23:14:58] 2025-11-26 22:14:01,129 | INFO     | executing command: df -mP /var/lib/boinc/slots/27
[2025-11-26 23:14:58] 2025-11-26 22:14:01,381 | INFO     | sufficient remaining disk space (495328428032 B)
[2025-11-26 23:14:58] 2025-11-26 22:14:01,381 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:14:58] 2025-11-26 22:14:01,382 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:14:58] 2025-11-26 22:14:01,382 | INFO     | update_server=False
[2025-11-26 23:14:58] 2025-11-26 22:14:01,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:14:58] 2025-11-26 22:14:01,659 | INFO     | all job control threads have been joined
[2025-11-26 23:14:58] 2025-11-26 22:14:01,954 | INFO     | all payload control threads have been joined
[2025-11-26 23:14:58] 2025-11-26 22:14:01,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:14:58] 2025-11-26 22:14:01,969 | INFO     | aborting loop
[2025-11-26 23:14:58] 2025-11-26 22:14:02,310 | INFO     | all data control threads have been joined
[2025-11-26 23:14:58] 2025-11-26 22:14:02,387 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:02,606 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:14:58] 2025-11-26 22:14:02,651 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:14:58] 2025-11-26 22:14:02,665 | INFO     | [job] control thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:02,699 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:02,734 | INFO     | [job] validate thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:02,883 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:02,960 | INFO     | [payload] control thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:02,974 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:03,205 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:03,206 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:03,206 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:03,316 | INFO     | [data] control thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:03,430 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:03,612 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:03,781 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:04,232 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:14:58] 2025-11-26 22:14:04,658 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:08,241 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:14:58] 2025-11-26 22:14:30,590 | INFO     | PID=13279 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 23:14:58] 2025-11-26 22:14:30,590 | INFO     | .. there are 9 such processes running
[2025-11-26 23:14:58] 2025-11-26 22:14:30,591 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:14:58] 2025-11-26 22:14:30,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:14:58] 2025-11-26 22:14:30,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:14:58] 2025-11-26 22:14:50,510 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:14:58] 2025-11-26 22:14:52,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140533556250432)>', '<ExcThread(monitor, started 140532672100096)>']
[2025-11-26 23:14:58] 2025-11-26 22:14:52,719 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:14:58] 2025-11-26 22:14:52,720 | INFO     | [monitor] control thread has ended
[2025-11-26 23:14:58] 2025-11-26 22:14:57,075 | INFO     | all workflow threads have been joined
[2025-11-26 23:14:58] 2025-11-26 22:14:57,076 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:14:58] 2025-11-26 22:14:57,076 | INFO     | traces error code: 0
[2025-11-26 23:14:58] 2025-11-26 22:14:57,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:14:58] 2025-11-26 22:14:57,274 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:14:58] 2025-11-26 22:14:57,281 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:14:58] 2025-11-26 22:14:57,284 [wrapper] pilotpid: 13279
[2025-11-26 23:14:58] 2025-11-26 22:14:57,287 [wrapper] Pilot exit status: 0
[2025-11-26 23:14:58] 2025-11-26 22:14:57,306 [wrapper] pandaids: 6895346892
[2025-11-26 23:14:58] 2025-11-26 22:14:57,347 [wrapper] cleanup supervisor_pilot 26959 13280
[2025-11-26 23:14:58] 2025-11-26 22:14:57,355 [wrapper] Test setup, not cleaning
[2025-11-26 23:14:58] 2025-11-26 22:14:57,372 [wrapper] apfmon messages muted
[2025-11-26 23:14:58] 2025-11-26 22:14:57,375 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:14:58] 2025-11-26 22:14:57,380 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:14:58]  *** Error codes and diagnostics ***
[2025-11-26 23:14:58]     "exeErrorCode": 0,
[2025-11-26 23:14:58]     "exeErrorDiag": "",
[2025-11-26 23:14:58]     "pilotErrorCode": 0,
[2025-11-26 23:14:58]     "pilotErrorDiag": "",
[2025-11-26 23:14:58]  *** Listing of results directory ***
[2025-11-26 23:14:58] total 1330260
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc      5112 Nov 22 20:13 queuedata.json
[2025-11-26 23:14:58] -rwx------. 1 boinc boinc     36292 Nov 22 20:13 runpilot2-wrapper.sh
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc    576529 Nov 22 20:13 pilot3.tar.gz
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc       100 Nov 26 01:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:14:58] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 01:15 run_atlas
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc       105 Nov 26 01:15 job.xml
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc      6392 Nov 26 01:15 init_data.xml
[2025-11-26 23:14:58] -rw-r--r--. 2 boinc boinc 409729625 Nov 26 01:15 EVNT.47483658._000466.pool.root.1
[2025-11-26 23:14:58] -rw-r--r--. 2 boinc boinc     15847 Nov 26 01:15 start_atlas.sh
[2025-11-26 23:14:58] drwxrwx--x. 2 boinc boinc        68 Nov 26 01:15 shared
[2025-11-26 23:14:58] -rw-r--r--. 2 boinc boinc    590097 Nov 26 01:15 input.tar.gz
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc         0 Nov 26 01:15 boinc_lockfile
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc      2784 Nov 26 01:15 pandaJob.out
[2025-11-26 23:14:58] -rw-------. 1 boinc boinc    991877 Nov 26 01:19 agis_schedconf.cvmfs.json
[2025-11-26 23:14:58] drwx------. 5 boinc boinc      4096 Nov 26 01:19 pilot3
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc       533 Nov 26 22:46 boinc_task_state.xml
[2025-11-26 23:14:58] -rw-------. 1 boinc boinc 922649596 Nov 26 23:11 HITS.47556137._004619.pool.root.1
[2025-11-26 23:14:58] -rw-------. 1 boinc boinc      1031 Nov 26 23:12 memory_monitor_summary.json
[2025-11-26 23:14:58] -rw-------. 1 boinc boinc   1516240 Nov 26 23:12 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:14:58] -rw-------. 1 boinc boinc   2396040 Nov 26 23:12 log.47556137._004619.job.log.tgz.1
[2025-11-26 23:14:58] -rw-------. 1 boinc boinc      7942 Nov 26 23:13 heartbeat.json
[2025-11-26 23:14:58] -rw-------. 1 boinc boinc        95 Nov 26 23:14 pilot_heartbeat.json
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc      8192 Nov 26 23:14 boinc_mmap_file
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc        29 Nov 26 23:14 wrapper_checkpoint.txt
[2025-11-26 23:14:58] -rw-------. 1 boinc boinc      4885 Nov 26 23:14 pilotlog.txt
[2025-11-26 23:14:58] -rw-------. 1 boinc boinc  10556907 Nov 26 23:14 log.47556137._004619.job.log.1
[2025-11-26 23:14:58] -rw-------. 1 boinc boinc       353 Nov 26 23:14 output.list
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc       620 Nov 26 23:14 runtime_log
[2025-11-26 23:14:58] -rw-------. 1 boinc boinc  12974080 Nov 26 23:14 result.tar.gz
[2025-11-26 23:14:58] -rw-------. 1 boinc boinc       662 Nov 26 23:14 Tm8LDmcE8g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOEIKDml62Sfn.diag
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc      8833 Nov 26 23:14 runtime_log.err
[2025-11-26 23:14:58] -rw-r--r--. 1 boinc boinc     21505 Nov 26 23:14 stderr.txt
[2025-11-26 23:14:59] HITS file was successfully produced:
[2025-11-26 23:14:59] -rw-------. 1 boinc boinc 922649596 Nov 26 23:11 shared/HITS.pool.root.1
[2025-11-26 23:14:59]  *** Contents of shared directory: ***
[2025-11-26 23:14:59] total 1314424
[2025-11-26 23:14:59] -rw-r--r--. 2 boinc boinc 409729625 Nov 26 01:15 ATLAS.root_0
[2025-11-26 23:14:59] -rw-r--r--. 2 boinc boinc     15847 Nov 26 01:15 start_atlas.sh
[2025-11-26 23:14:59] -rw-r--r--. 2 boinc boinc    590097 Nov 26 01:15 input.tar.gz
[2025-11-26 23:14:59] -rw-------. 1 boinc boinc 922649596 Nov 26 23:11 HITS.pool.root.1
[2025-11-26 23:14:59] -rw-------. 1 boinc boinc  12974080 Nov 26 23:14 result.tar.gz
23:15:00 (9464): run_atlas exited; CPU time 326964.559626
23:15:00 (9464): called boinc_finish(0)

</stderr_txt>
]]>

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