Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:27:17 (12318): wrapper (7.7.26015): starting
06:27:17 (12318): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 06:27:17] Arguments: --nthreads 8
[2025-11-23 06:27:17] Threads: 8
[2025-11-23 06:27:17] Checking for CVMFS
[2025-11-23 06:27:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 06:27:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 06:27:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 06:27:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 06:27:18] 2.11.2.0 2840 63254 80604 153207 0 82 12159321 20275200 1 130560 0 16212274 99.838 3913219 32503 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 06:27:18] CVMFS is ok
[2025-11-23 06:27:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 06:27:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 06:27:18] Further information can be found at the LHC@home message board.
[2025-11-23 06:27:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 06:27:18] Checking for apptainer binary...
[2025-11-23 06:27:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 06:27:18] Running /usr/bin/apptainer --version
[2025-11-23 06:27:18] apptainer version 1.3.2-1.el7
[2025-11-23 06:27:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 06:27:20] c-204-39.aglt2.org
[2025-11-23 06:27:20] apptainer works
[2025-11-23 06:27:20] Set ATHENA_PROC_NUMBER=8
[2025-11-23 06:27:20] Set ATHENA_CORE_NUMBER=8
[2025-11-23 06:27:20] Starting ATLAS job with PandaID=6895346081
[2025-11-23 06:27:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 19:14:09]  *** The last 200 lines of the pilot log: ***
[2025-11-23 19:14:09] 2025-11-24 00:13:33,524 | INFO     | time since job start (45956s) is within the limit (172800.0s)
[2025-11-23 19:14:09] 2025-11-24 00:13:35,233 | INFO     | monitor loop #3384: job 0:6895346081 is in state 'finished'
[2025-11-23 19:14:09] 2025-11-24 00:13:35,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 19:14:09] 2025-11-24 00:13:35,530 | INFO     | time since job start (45958s) is within the limit (172800.0s)
[2025-11-23 19:14:09] 2025-11-24 00:13:36,701 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 19:14:09] 2025-11-24 00:13:36,705 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-23 19:14:09] 2025-11-24 00:13:36,708 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895346081/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 19:14:09] 2025-11-24 00:13:36,709 | INFO     | extracted standard info from prmon json
[2025-11-23 19:14:09] 2025-11-24 00:13:36,709 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 19:14:09] 2025-11-24 00:13:36,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 19:14:09] 2025-11-24 00:13:36,724 | INFO     | fitting pss+swap vs Time
[2025-11-23 19:14:09] 2025-11-24 00:13:36,725 | INFO     | sum of square deviations: 132392464670.30482
[2025-11-23 19:14:09] 2025-11-24 00:13:36,737 | INFO     | sum of deviations: 848348672710.6027
[2025-11-23 19:14:09] 2025-11-24 00:13:36,737 | INFO     | mean x: 1763920226.5723772
[2025-11-23 19:14:09] 2025-11-24 00:13:36,737 | INFO     | mean y: 2874481.3559096945
[2025-11-23 19:14:09] 2025-11-24 00:13:36,737 | INFO     | intersect: -11300030005.742922
[2025-11-23 19:14:09] 2025-11-24 00:13:36,738 | INFO     | chi2: 5.411505152198821
[2025-11-23 19:14:09] 2025-11-24 00:13:36,739 | INFO     | sum of square deviations: 129772770258.6563
[2025-11-23 19:14:09] 2025-11-24 00:13:36,751 | INFO     | sum of deviations: 1065415339462.2343
[2025-11-23 19:14:09] 2025-11-24 00:13:36,751 | INFO     | mean x: 1763920074.076203
[2025-11-23 19:14:09] 2025-11-24 00:13:36,751 | INFO     | mean y: 2887111.4344919785
[2025-11-23 19:14:09] 2025-11-24 00:13:36,751 | INFO     | intersect: -14478637023.100124
[2025-11-23 19:14:09] 2025-11-24 00:13:36,752 | INFO     | chi2: 2.999904488395186
[2025-11-23 19:14:09] 2025-11-24 00:13:36,752 | INFO     | current chi2=2.999904488395186 (change=44.56432352880132 %)
[2025-11-23 19:14:09] 2025-11-24 00:13:36,753 | INFO     | sum of square deviations: 127187867196.98532
[2025-11-23 19:14:09] 2025-11-24 00:13:36,764 | INFO     | sum of deviations: 1157222881547.5684
[2025-11-23 19:14:09] 2025-11-24 00:13:36,764 | INFO     | mean x: 1763919921.5800807
[2025-11-23 19:14:09] 2025-11-24 00:13:36,764 | INFO     | mean y: 2892519.200538358
[2025-11-23 19:14:09] 2025-11-24 00:13:36,765 | INFO     | intersect: -16046189358.307701
[2025-11-23 19:14:09] 2025-11-24 00:13:36,765 | INFO     | chi2: 2.415083252450953
[2025-11-23 19:14:09] 2025-11-24 00:13:36,766 | INFO     | current chi2=2.415083252450953 (change=19.49466185362074 %)
[2025-11-23 19:14:09] 2025-11-24 00:13:36,766 | INFO     | right removable region: 742
[2025-11-23 19:14:09] 2025-11-24 00:13:36,767 | INFO     | sum of square deviations: 129772507348.65643
[2025-11-23 19:14:09] 2025-11-24 00:13:36,778 | INFO     | sum of deviations: 644842546037.8948
[2025-11-23 19:14:09] 2025-11-24 00:13:36,778 | INFO     | mean x: 1763920379.076203
[2025-11-23 19:14:09] 2025-11-24 00:13:36,778 | INFO     | mean y: 2886306.0895721926
[2025-11-23 19:14:09] 2025-11-24 00:13:36,778 | INFO     | intersect: -8762074250.584171
[2025-11-23 19:14:09] 2025-11-24 00:13:36,779 | INFO     | chi2: 3.1507808538100055
[2025-11-23 19:14:09] 2025-11-24 00:13:36,779 | INFO     | current chi2=3.1507808538100055 (change=41.776256971135474 %)
[2025-11-23 19:14:09] 2025-11-24 00:13:36,780 | INFO     | sum of square deviations: 127187386761.14377
[2025-11-23 19:14:09] 2025-11-24 00:13:36,792 | INFO     | sum of deviations: 602103201289.8506
[2025-11-23 19:14:09] 2025-11-24 00:13:36,792 | INFO     | mean x: 1763920531.5787349
[2025-11-23 19:14:09] 2025-11-24 00:13:36,792 | INFO     | mean y: 2888826.053835801
[2025-11-23 19:14:09] 2025-11-24 00:13:36,792 | INFO     | intersect: -8347484791.410213
[2025-11-23 19:14:09] 2025-11-24 00:13:36,793 | INFO     | chi2: 3.1109689388517725
[2025-11-23 19:14:09] 2025-11-24 00:13:36,793 | INFO     | current chi2=3.1109689388517725 (change=1.263557092842284 %)
[2025-11-23 19:14:09] 2025-11-24 00:13:36,793 | INFO     | left removable region: 20
[2025-11-23 19:14:09] 2025-11-24 00:13:36,794 | INFO     | sum of square deviations: 116705342413.01376
[2025-11-23 19:14:09] 2025-11-24 00:13:36,805 | INFO     | sum of deviations: 859730933059.6288
[2025-11-23 19:14:09] 2025-11-24 00:13:36,805 | INFO     | mean x: 1763920501.0831025
[2025-11-23 19:14:09] 2025-11-24 00:13:36,805 | INFO     | mean y: 2910599.7728531854
[2025-11-23 19:14:09] 2025-11-24 00:13:36,806 | INFO     | intersect: -12991327597.758707
[2025-11-23 19:14:09] 2025-11-24 00:13:36,806 | INFO     | chi2: 0.08364312365170073
[2025-11-23 19:14:09] 2025-11-24 00:13:36,807 | INFO     | current memory leak: 7.37 B/s (using 722 data points, chi2=0.08)
[2025-11-23 19:14:09] 2025-11-24 00:13:36,807 | INFO     | could have reported an average CPU frequency of 2157 MHz (29 samples)
[2025-11-23 19:14:09] 2025-11-24 00:13:36,807 | INFO     | ..............................
[2025-11-23 19:14:09] 2025-11-24 00:13:36,807 | INFO     | . Timing measurements:
[2025-11-23 19:14:09] 2025-11-24 00:13:36,807 | INFO     | . get job = 0 s
[2025-11-23 19:14:09] 2025-11-24 00:13:36,808 | INFO     | . initial setup = 2 s
[2025-11-23 19:14:09] 2025-11-24 00:13:36,808 | INFO     | . payload setup = 9 s
[2025-11-23 19:14:09] 2025-11-24 00:13:36,808 | INFO     | . stage-in = 0 s
[2025-11-23 19:14:09] 2025-11-24 00:13:36,808 | INFO     | . payload execution = 45914 s
[2025-11-23 19:14:09] 2025-11-24 00:13:36,808 | INFO     | . stage-out = 3 s
[2025-11-23 19:14:09] 2025-11-24 00:13:36,808 | INFO     | . log creation = 0 s
[2025-11-23 19:14:09] 2025-11-24 00:13:36,808 | INFO     | ..............................
[2025-11-23 19:14:09] 2025-11-24 00:13:37,138 | INFO     | 
[2025-11-23 19:14:09] 2025-11-24 00:13:37,138 | INFO     | job summary report
[2025-11-23 19:14:09] 2025-11-24 00:13:37,139 | INFO     | --------------------------------------------------
[2025-11-23 19:14:09] 2025-11-24 00:13:37,139 | INFO     | PanDA job id: 6895346081
[2025-11-23 19:14:09] 2025-11-24 00:13:37,139 | INFO     | task id: 47556137
[2025-11-23 19:14:09] 2025-11-24 00:13:37,139 | INFO     | errors: (none)
[2025-11-23 19:14:09] 2025-11-24 00:13:37,139 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 19:14:09] 2025-11-24 00:13:37,139 | INFO     | pilot state: finished 
[2025-11-23 19:14:09] 2025-11-24 00:13:37,140 | INFO     | transexitcode: 0
[2025-11-23 19:14:09] 2025-11-24 00:13:37,140 | INFO     | exeerrorcode: 0
[2025-11-23 19:14:09] 2025-11-24 00:13:37,140 | INFO     | exeerrordiag: 
[2025-11-23 19:14:09] 2025-11-24 00:13:37,140 | INFO     | exitcode: 0
[2025-11-23 19:14:09] 2025-11-24 00:13:37,140 | INFO     | exitmsg: OK
[2025-11-23 19:14:09] 2025-11-24 00:13:37,140 | INFO     | cpuconsumptiontime: 353323 s
[2025-11-23 19:14:09] 2025-11-24 00:13:37,141 | INFO     | nevents: 1000
[2025-11-23 19:14:09] 2025-11-24 00:13:37,141 | INFO     | neventsw: 0
[2025-11-23 19:14:09] 2025-11-24 00:13:37,141 | INFO     | pid: 22430
[2025-11-23 19:14:09] 2025-11-24 00:13:37,141 | INFO     | pgrp: 22430
[2025-11-23 19:14:09] 2025-11-24 00:13:37,141 | INFO     | corecount: 8
[2025-11-23 19:14:09] 2025-11-24 00:13:37,141 | INFO     | event service: False
[2025-11-23 19:14:09] 2025-11-24 00:13:37,142 | INFO     | sizes: {0: 2298585, 1: 2298784, 6: 2299046, 11: 2299074, 45927: 2345388, 45931: 2354382, 45933: 2354566, 45942: 2354812}
[2025-11-23 19:14:09] 2025-11-24 00:13:37,142 | INFO     | --------------------------------------------------
[2025-11-23 19:14:09] 2025-11-24 00:13:37,142 | INFO     | 
[2025-11-23 19:14:09] 2025-11-24 00:13:37,142 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 19:14:09] 2025-11-24 00:13:37,170 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,171 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,171 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,171 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,173 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,174 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,174 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 19:14:09] 2025-11-24 00:13:37,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,174 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 19:14:09] 2025-11-24 00:13:37,175 | INFO     | job 6895346081 has completed (purged errors)
[2025-11-23 19:14:09] 2025-11-24 00:13:37,175 | INFO     | overall cleanup function is called
[2025-11-23 19:14:09] 2025-11-24 00:13:38,190 | INFO     | --- collectZombieJob: --- 10, [22430]
[2025-11-23 19:14:09] 2025-11-24 00:13:38,190 | INFO     | zombie collector waiting for pid 22430
[2025-11-23 19:14:09] 2025-11-24 00:13:38,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 19:14:09] 2025-11-24 00:13:38,196 | INFO     | collected zombie processes
[2025-11-23 19:14:09] 2025-11-24 00:13:38,196 | INFO     | will attempt to kill all subprocesses of pid=22430
[2025-11-23 19:14:09] 2025-11-24 00:13:38,284 | INFO     | process IDs to be killed: [22430] (in reverse order)
[2025-11-23 19:14:09] 2025-11-24 00:13:38,343 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 19:14:09] 2025-11-24 00:13:38,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 19:14:09] 2025-11-24 00:13:38,348 | INFO     | did not find any defunct processes belonging to 22430
[2025-11-23 19:14:09] 2025-11-24 00:13:38,352 | INFO     | did not find any defunct processes belonging to 22430
[2025-11-23 19:14:09] 2025-11-24 00:13:38,354 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 19:14:09] 2025-11-24 00:13:38,355 | INFO     | ready for new job
[2025-11-23 19:14:09] 2025-11-24 00:13:38,355 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 19:14:09] 2025-11-24 00:13:38,359 | INFO     | ***************************************
[2025-11-23 19:14:09] 2025-11-24 00:13:38,359 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 19:14:09] 2025-11-24 00:13:38,359 | INFO     | ***************************************
[2025-11-23 19:14:09] 2025-11-24 00:13:38,359 | INFO     | 
[2025-11-23 19:14:09] 2025-11-24 00:13:38,360 | INFO     | architecture information:
[2025-11-23 19:14:09] 2025-11-24 00:13:38,360 | INFO     | executing command: cat /etc/os-release
[2025-11-23 19:14:09] 2025-11-24 00:13:38,378 | INFO     | cat /etc/os-release:
[2025-11-23 19:14:09] NAME="CentOS Linux"
[2025-11-23 19:14:09] VERSION="7 (Core)"
[2025-11-23 19:14:09] ID="centos"
[2025-11-23 19:14:09] ID_LIKE="rhel fedora"
[2025-11-23 19:14:09] VERSION_ID="7"
[2025-11-23 19:14:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 19:14:09] ANSI_COLOR="0;31"
[2025-11-23 19:14:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 19:14:09] HOME_URL="https://www.centos.org/"
[2025-11-23 19:14:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 19:14:09] 
[2025-11-23 19:14:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 19:14:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 19:14:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 19:14:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 19:14:09] 
[2025-11-23 19:14:09] 2025-11-24 00:13:38,379 | INFO     | ***************************************
[2025-11-23 19:14:09] 2025-11-24 00:13:38,882 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 19:14:09] 2025-11-24 00:13:38,903 | INFO     | sufficient remaining disk space (17436770304 B)
[2025-11-23 19:14:09] 2025-11-24 00:13:38,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 19:14:09] 2025-11-24 00:13:38,904 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 19:14:09] 2025-11-24 00:13:38,904 | INFO     | update_server=False
[2025-11-23 19:14:09] 2025-11-24 00:13:38,904 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 19:14:09] 2025-11-24 00:13:38,905 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:14:09] 2025-11-24 00:13:38,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 19:14:09] 2025-11-24 00:13:38,905 | INFO     | aborting loop
[2025-11-23 19:14:09] 2025-11-24 00:13:39,010 | INFO     | all data control threads have been joined
[2025-11-23 19:14:09] 2025-11-24 00:13:39,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 19:14:09] 2025-11-24 00:13:39,210 | INFO     | all payload control threads have been joined
[2025-11-23 19:14:09] 2025-11-24 00:13:39,817 | INFO     | all job control threads have been joined
[2025-11-23 19:14:09] 2025-11-24 00:13:39,905 | INFO     | [job] retrieve thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:39,910 | INFO     | [job] job monitor thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:39,927 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:40,016 | INFO     | [data] control thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:40,125 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:40,140 | INFO     | [job] validate thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:40,211 | INFO     | [payload] control thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:40,593 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:40,656 | INFO     | [payload] validate_post thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:40,678 | INFO     | [data] copytool_in thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:40,823 | INFO     | [job] control thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:41,174 | INFO     | [data] copytool_out thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:41,184 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:41,492 | INFO     | [payload] failed_post thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:41,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:14:09] 2025-11-24 00:13:42,908 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:42,909 | INFO     | [job] queue monitor thread has finished
[2025-11-23 19:14:09] 2025-11-24 00:13:53,158 | INFO     | [monitor] cgroup control has ended
[2025-11-23 19:14:09] 2025-11-24 00:13:55,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140106005210944)>', '<ExcThread(monitor, started 140105574504192)>']
[2025-11-23 19:14:09] 2025-11-24 00:14:00,209 | INFO     | all workflow threads have been joined
[2025-11-23 19:14:09] 2025-11-24 00:14:00,209 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 19:14:09] 2025-11-24 00:14:00,210 | INFO     | traces error code: 0
[2025-11-23 19:14:09] 2025-11-24 00:14:00,210 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 19:14:09] 2025-11-24 00:14:08,756 | INFO     | PID=15997 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 19:14:09] 2025-11-24 00:14:08,758 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 19:14:09] 2025-11-24 00:14:08,758 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 19:14:09] 2025-11-24 00:14:08,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 19:14:09] 2025-11-24 00:14:08,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 19:14:09] 2025-11-24 00:14:08,758 | INFO     | [monitor] control thread has ended
[2025-11-23 19:14:09] 2025-11-24 00:14:08,874 [wrapper] ==== pilot stdout END ====
[2025-11-23 19:14:09] 2025-11-24 00:14:08,879 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 19:14:09] 2025-11-24 00:14:08,885 [wrapper] pilotpid: 15997
[2025-11-23 19:14:09] 2025-11-24 00:14:08,890 [wrapper] Pilot exit status: 0
[2025-11-23 19:14:09] 2025-11-24 00:14:08,909 [wrapper] pandaids: 6895346081
[2025-11-23 19:14:09] 2025-11-24 00:14:08,953 [wrapper] cleanup supervisor_pilot  6243 15998
[2025-11-23 19:14:09] 2025-11-24 00:14:08,958 [wrapper] Test setup, not cleaning
[2025-11-23 19:14:09] 2025-11-24 00:14:08,963 [wrapper] apfmon messages muted
[2025-11-23 19:14:09] 2025-11-24 00:14:08,968 [wrapper] ==== wrapper stdout END ====
[2025-11-23 19:14:09] 2025-11-24 00:14:08,972 [wrapper] ==== wrapper stderr END ====
[2025-11-23 19:14:09]  *** Error codes and diagnostics ***
[2025-11-23 19:14:09]     "exeErrorCode": 0,
[2025-11-23 19:14:09]     "exeErrorDiag": "",
[2025-11-23 19:14:09]     "pilotErrorCode": 0,
[2025-11-23 19:14:09]     "pilotErrorDiag": "",
[2025-11-23 19:14:09]  *** Listing of results directory ***
[2025-11-23 19:14:09] total 1317876
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 12:43 pilot3.tar.gz
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 12:49 queuedata.json
[2025-11-23 19:14:09] -rwx------ 1 boincer umatlas     36292 Nov 22 12:49 runpilot2-wrapper.sh
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas       100 Nov 23 06:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 19:14:09] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 06:27 run_atlas
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas       105 Nov 23 06:27 job.xml
[2025-11-23 19:14:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 06:27 start_atlas.sh
[2025-11-23 19:14:09] drwxrwx--x 2 boincer umatlas      4096 Nov 23 06:27 shared
[2025-11-23 19:14:09] -rw-r--r-- 2 boincer umatlas    590099 Nov 23 06:27 input.tar.gz
[2025-11-23 19:14:09] -rw-r--r-- 2 boincer umatlas 410614716 Nov 23 06:27 EVNT.47483658._000454.pool.root.1
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas         0 Nov 23 06:27 boinc_lockfile
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 06:27 pandaJob.out
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas        57 Nov 23 06:27 setup.sh.local
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas    989784 Nov 23 06:27 agis_schedconf.cvmfs.json
[2025-11-23 19:14:09] drwx------ 5 boincer umatlas      4096 Nov 23 06:27 pilot3
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas       533 Nov 23 19:02 boinc_task_state.xml
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 19:11 init_data.xml
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas 918316594 Nov 23 19:12 HITS.47556137._004495.pool.root.1
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas      1076 Nov 23 19:13 memory_monitor_summary.json
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas   1526164 Nov 23 19:13 agis_ddmendpoints.agis.ALL.json
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas   1995171 Nov 23 19:13 log.47556137._004495.job.log.tgz.1
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas      8657 Nov 23 19:13 heartbeat.json
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 19:13 boinc_mmap_file
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas        29 Nov 23 19:13 wrapper_checkpoint.txt
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas        95 Nov 23 19:14 pilot_heartbeat.json
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas       745 Nov 23 19:14 pilotlog.txt
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas   6331494 Nov 23 19:14 log.47556137._004495.job.log.1
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas       353 Nov 23 19:14 output.list
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas       620 Nov 23 19:14 runtime_log
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas   8345600 Nov 23 19:14 result.tar.gz
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas       668 Nov 23 19:14 SaFKDmpu6g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1JKKDmrnGtEo.diag
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 19:14 runtime_log.err
[2025-11-23 19:14:09] -rw-r--r-- 1 boincer umatlas     21317 Nov 23 19:14 stderr.txt
[2025-11-23 19:14:09] HITS file was successfully produced:
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas 918316594 Nov 23 19:12 shared/HITS.pool.root.1
[2025-11-23 19:14:09]  *** Contents of shared directory: ***
[2025-11-23 19:14:09] total 1306540
[2025-11-23 19:14:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 06:27 start_atlas.sh
[2025-11-23 19:14:09] -rw-r--r-- 2 boincer umatlas    590099 Nov 23 06:27 input.tar.gz
[2025-11-23 19:14:09] -rw-r--r-- 2 boincer umatlas 410614716 Nov 23 06:27 ATLAS.root_0
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas 918316594 Nov 23 19:12 HITS.pool.root.1
[2025-11-23 19:14:09] -rw------- 1 boincer umatlas   8345600 Nov 23 19:14 result.tar.gz
19:14:10 (12318): run_atlas exited; CPU time 349297.544791
19:14:10 (12318): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN