Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:41:52 (22468): wrapper (7.7.26015): starting
23:41:52 (22468): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:41:52] Arguments: --nthreads 8
[2025-11-22 23:41:52] Threads: 8
[2025-11-22 23:41:52] Checking for CVMFS
[2025-11-22 23:41:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:41:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:41:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:41:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:41:53] 2.11.2.0 2951 19782 78808 153197 1 81 12090450 20275201 1 130560 0 2708348 99.523 1449327 29847 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 23:41:53] CVMFS is ok
[2025-11-22 23:41:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 23:41:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 23:41:53] Further information can be found at the LHC@home message board.
[2025-11-22 23:41:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:41:53] Checking for apptainer binary...
[2025-11-22 23:41:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:41:53] Running /usr/bin/apptainer --version
[2025-11-22 23:41:53] apptainer version 1.3.2-1.el7
[2025-11-22 23:41:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:41:54] c-204-23.aglt2.org
[2025-11-22 23:41:54] apptainer works
[2025-11-22 23:41:54] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:41:54] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:41:54] Starting ATLAS job with PandaID=6895336842
[2025-11-22 23:41:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 12:01:32]  *** The last 200 lines of the pilot log: ***
[2025-11-23 12:01:33] 2025-11-23 17:00:58,684 | INFO     | monitor loop #3256: job 0:6895336842 is in state 'finished'
[2025-11-23 12:01:33] 2025-11-23 17:00:58,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 12:01:33] 2025-11-23 17:00:59,413 | INFO     | time since job start (44327s) is within the limit (172800.0s)
[2025-11-23 12:01:33] 2025-11-23 17:00:59,700 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 12:01:33] 2025-11-23 17:00:59,704 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-23 12:01:33] 2025-11-23 17:00:59,706 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895336842/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 12:01:33] 2025-11-23 17:00:59,707 | INFO     | extracted standard info from prmon json
[2025-11-23 12:01:33] 2025-11-23 17:00:59,707 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 12:01:33] 2025-11-23 17:00:59,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 12:01:33] 2025-11-23 17:00:59,719 | INFO     | fitting pss+swap vs Time
[2025-11-23 12:01:33] 2025-11-23 17:00:59,720 | INFO     | sum of square deviations: 118656207505.6691
[2025-11-23 12:01:33] 2025-11-23 17:00:59,736 | INFO     | sum of deviations: 829856370641.0911
[2025-11-23 12:01:33] 2025-11-23 17:00:59,736 | INFO     | mean x: 1763895077.1404958
[2025-11-23 12:01:33] 2025-11-23 17:00:59,737 | INFO     | mean y: 3202807.1363636362
[2025-11-23 12:01:33] 2025-11-23 17:00:59,737 | INFO     | intersect: -12333105572.158192
[2025-11-23 12:01:33] 2025-11-23 17:00:59,738 | INFO     | chi2: 5.906946643596884
[2025-11-23 12:01:33] 2025-11-23 17:00:59,738 | INFO     | sum of square deviations: 116221633911.10435
[2025-11-23 12:01:33] 2025-11-23 17:00:59,750 | INFO     | sum of deviations: 1096095979560.5128
[2025-11-23 12:01:33] 2025-11-23 17:00:59,750 | INFO     | mean x: 1763894924.6449375
[2025-11-23 12:01:33] 2025-11-23 17:00:59,750 | INFO     | mean y: 3219478.990291262
[2025-11-23 12:01:33] 2025-11-23 17:00:59,750 | INFO     | intersect: -16632221533.21685
[2025-11-23 12:01:33] 2025-11-23 17:00:59,751 | INFO     | chi2: 2.7855312961281298
[2025-11-23 12:01:33] 2025-11-23 17:00:59,751 | INFO     | current chi2=2.7855312961281298 (change=52.843127520922515 %)
[2025-11-23 12:01:33] 2025-11-23 17:00:59,752 | INFO     | sum of square deviations: 113820595829.00987
[2025-11-23 12:01:33] 2025-11-23 17:00:59,763 | INFO     | sum of deviations: 1177488545608.484
[2025-11-23 12:01:33] 2025-11-23 17:00:59,763 | INFO     | mean x: 1763894772.1494412
[2025-11-23 12:01:33] 2025-11-23 17:00:59,763 | INFO     | mean y: 3224637.9581005587
[2025-11-23 12:01:33] 2025-11-23 17:00:59,763 | INFO     | intersect: -18244491205.884724
[2025-11-23 12:01:33] 2025-11-23 17:00:59,764 | INFO     | chi2: 2.3360271779080737
[2025-11-23 12:01:33] 2025-11-23 17:00:59,764 | INFO     | current chi2=2.3360271779080737 (change=16.13710529279868 %)
[2025-11-23 12:01:33] 2025-11-23 17:00:59,764 | INFO     | right removable region: 715
[2025-11-23 12:01:33] 2025-11-23 17:00:59,765 | INFO     | sum of square deviations: 116221350261.10442
[2025-11-23 12:01:33] 2025-11-23 17:00:59,776 | INFO     | sum of deviations: 610320188872.3264
[2025-11-23 12:01:33] 2025-11-23 17:00:59,776 | INFO     | mean x: 1763895229.6449375
[2025-11-23 12:01:33] 2025-11-23 17:00:59,776 | INFO     | mean y: 3216535.0208044383
[2025-11-23 12:01:33] 2025-11-23 17:00:59,776 | INFO     | intersect: -9259632909.50314
[2025-11-23 12:01:33] 2025-11-23 17:00:59,777 | INFO     | chi2: 3.7117252031413606
[2025-11-23 12:01:33] 2025-11-23 17:00:59,777 | INFO     | current chi2=3.7117252031413606 (change=37.16338699004736 %)
[2025-11-23 12:01:33] 2025-11-23 17:00:59,778 | INFO     | sum of square deviations: 113820116491.60202
[2025-11-23 12:01:33] 2025-11-23 17:00:59,789 | INFO     | sum of deviations: 568096945123.5243
[2025-11-23 12:01:33] 2025-11-23 17:00:59,789 | INFO     | mean x: 1763895382.146648
[2025-11-23 12:01:33] 2025-11-23 17:00:59,789 | INFO     | mean y: 3219215.280726257
[2025-11-23 12:01:33] 2025-11-23 17:00:59,790 | INFO     | intersect: -8800704106.91107
[2025-11-23 12:01:33] 2025-11-23 17:00:59,790 | INFO     | chi2: 3.680402692160049
[2025-11-23 12:01:33] 2025-11-23 17:00:59,791 | INFO     | current chi2=3.680402692160049 (change=0.8438801168470786 %)
[2025-11-23 12:01:33] 2025-11-23 17:00:59,791 | INFO     | left removable region: 20
[2025-11-23 12:01:33] 2025-11-23 17:00:59,791 | INFO     | sum of square deviations: 104096364392.81165
[2025-11-23 12:01:33] 2025-11-23 17:00:59,802 | INFO     | sum of deviations: 858073507505.6876
[2025-11-23 12:01:33] 2025-11-23 17:00:59,802 | INFO     | mean x: 1763895351.656115
[2025-11-23 12:01:33] 2025-11-23 17:00:59,802 | INFO     | mean y: 3244993.002877698
[2025-11-23 12:01:33] 2025-11-23 17:00:59,802 | INFO     | intersect: -14536665983.686901
[2025-11-23 12:01:33] 2025-11-23 17:00:59,803 | INFO     | chi2: 0.07708533334340943
[2025-11-23 12:01:33] 2025-11-23 17:00:59,803 | INFO     | current memory leak: 8.24 B/s (using 695 data points, chi2=0.08)
[2025-11-23 12:01:33] 2025-11-23 17:00:59,804 | INFO     | could have reported an average CPU frequency of 2154 MHz (28 samples)
[2025-11-23 12:01:33] 2025-11-23 17:00:59,804 | INFO     | ..............................
[2025-11-23 12:01:33] 2025-11-23 17:00:59,804 | INFO     | . Timing measurements:
[2025-11-23 12:01:33] 2025-11-23 17:00:59,804 | INFO     | . get job = 0 s
[2025-11-23 12:01:33] 2025-11-23 17:00:59,804 | INFO     | . initial setup = 2 s
[2025-11-23 12:01:33] 2025-11-23 17:00:59,804 | INFO     | . payload setup = 9 s
[2025-11-23 12:01:33] 2025-11-23 17:00:59,804 | INFO     | . stage-in = 0 s
[2025-11-23 12:01:33] 2025-11-23 17:00:59,804 | INFO     | . payload execution = 44285 s
[2025-11-23 12:01:33] 2025-11-23 17:00:59,805 | INFO     | . stage-out = 3 s
[2025-11-23 12:01:33] 2025-11-23 17:00:59,805 | INFO     | . log creation = 0 s
[2025-11-23 12:01:33] 2025-11-23 17:00:59,805 | INFO     | ..............................
[2025-11-23 12:01:33] 2025-11-23 17:00:59,898 | INFO     | 
[2025-11-23 12:01:33] 2025-11-23 17:00:59,898 | INFO     | job summary report
[2025-11-23 12:01:33] 2025-11-23 17:00:59,898 | INFO     | --------------------------------------------------
[2025-11-23 12:01:33] 2025-11-23 17:00:59,898 | INFO     | PanDA job id: 6895336842
[2025-11-23 12:01:33] 2025-11-23 17:00:59,898 | INFO     | task id: 47556137
[2025-11-23 12:01:33] 2025-11-23 17:00:59,899 | INFO     | errors: (none)
[2025-11-23 12:01:33] 2025-11-23 17:00:59,899 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 12:01:33] 2025-11-23 17:00:59,899 | INFO     | pilot state: finished 
[2025-11-23 12:01:33] 2025-11-23 17:00:59,899 | INFO     | transexitcode: 0
[2025-11-23 12:01:33] 2025-11-23 17:00:59,899 | INFO     | exeerrorcode: 0
[2025-11-23 12:01:33] 2025-11-23 17:00:59,899 | INFO     | exeerrordiag: 
[2025-11-23 12:01:33] 2025-11-23 17:00:59,900 | INFO     | exitcode: 0
[2025-11-23 12:01:33] 2025-11-23 17:00:59,900 | INFO     | exitmsg: OK
[2025-11-23 12:01:33] 2025-11-23 17:00:59,900 | INFO     | cpuconsumptiontime: 342729 s
[2025-11-23 12:01:33] 2025-11-23 17:00:59,900 | INFO     | nevents: 1000
[2025-11-23 12:01:33] 2025-11-23 17:00:59,900 | INFO     | neventsw: 0
[2025-11-23 12:01:33] 2025-11-23 17:00:59,901 | INFO     | pid: 32653
[2025-11-23 12:01:33] 2025-11-23 17:00:59,901 | INFO     | pgrp: 32653
[2025-11-23 12:01:33] 2025-11-23 17:00:59,901 | INFO     | corecount: 8
[2025-11-23 12:01:33] 2025-11-23 17:00:59,901 | INFO     | event service: False
[2025-11-23 12:01:33] 2025-11-23 17:00:59,901 | INFO     | sizes: {0: 2298585, 1: 2298784, 6: 2299046, 11: 2299074, 44297: 2344776, 44303: 2353954, 44310: 2354144}
[2025-11-23 12:01:33] 2025-11-23 17:00:59,901 | INFO     | --------------------------------------------------
[2025-11-23 12:01:33] 2025-11-23 17:00:59,902 | INFO     | 
[2025-11-23 12:01:33] 2025-11-23 17:00:59,902 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 12:01:33] 2025-11-23 17:00:59,931 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,932 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,932 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,932 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,932 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,933 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,934 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,934 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,934 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,934 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,935 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 12:01:33] 2025-11-23 17:00:59,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,935 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 12:01:33] 2025-11-23 17:00:59,935 | INFO     | job 6895336842 has completed (purged errors)
[2025-11-23 12:01:33] 2025-11-23 17:00:59,936 | INFO     | overall cleanup function is called
[2025-11-23 12:01:33] 2025-11-23 17:01:00,951 | INFO     | --- collectZombieJob: --- 10, [32653]
[2025-11-23 12:01:33] 2025-11-23 17:01:00,951 | INFO     | zombie collector waiting for pid 32653
[2025-11-23 12:01:33] 2025-11-23 17:01:00,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 12:01:33] 2025-11-23 17:01:00,952 | INFO     | collected zombie processes
[2025-11-23 12:01:33] 2025-11-23 17:01:00,952 | INFO     | will attempt to kill all subprocesses of pid=32653
[2025-11-23 12:01:33] 2025-11-23 17:01:01,050 | INFO     | process IDs to be killed: [32653] (in reverse order)
[2025-11-23 12:01:33] 2025-11-23 17:01:01,107 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 12:01:33] 2025-11-23 17:01:01,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 12:01:33] 2025-11-23 17:01:01,112 | INFO     | did not find any defunct processes belonging to 32653
[2025-11-23 12:01:33] 2025-11-23 17:01:01,115 | INFO     | did not find any defunct processes belonging to 32653
[2025-11-23 12:01:33] 2025-11-23 17:01:01,117 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 12:01:33] 2025-11-23 17:01:01,117 | INFO     | ready for new job
[2025-11-23 12:01:33] 2025-11-23 17:01:01,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 12:01:33] 2025-11-23 17:01:01,121 | INFO     | ***************************************
[2025-11-23 12:01:33] 2025-11-23 17:01:01,121 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 12:01:33] 2025-11-23 17:01:01,121 | INFO     | ***************************************
[2025-11-23 12:01:33] 2025-11-23 17:01:01,121 | INFO     | 
[2025-11-23 12:01:33] 2025-11-23 17:01:01,122 | INFO     | architecture information:
[2025-11-23 12:01:33] 2025-11-23 17:01:01,123 | INFO     | executing command: cat /etc/os-release
[2025-11-23 12:01:33] 2025-11-23 17:01:01,142 | INFO     | cat /etc/os-release:
[2025-11-23 12:01:33] NAME="CentOS Linux"
[2025-11-23 12:01:33] VERSION="7 (Core)"
[2025-11-23 12:01:33] ID="centos"
[2025-11-23 12:01:33] ID_LIKE="rhel fedora"
[2025-11-23 12:01:33] VERSION_ID="7"
[2025-11-23 12:01:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 12:01:33] ANSI_COLOR="0;31"
[2025-11-23 12:01:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 12:01:33] HOME_URL="https://www.centos.org/"
[2025-11-23 12:01:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 12:01:33] 
[2025-11-23 12:01:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 12:01:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 12:01:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 12:01:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 12:01:33] 
[2025-11-23 12:01:33] 2025-11-23 17:01:01,143 | INFO     | ***************************************
[2025-11-23 12:01:33] 2025-11-23 17:01:01,646 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 12:01:33] 2025-11-23 17:01:01,668 | INFO     | sufficient remaining disk space (17432576000 B)
[2025-11-23 12:01:33] 2025-11-23 17:01:01,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 12:01:33] 2025-11-23 17:01:01,669 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 12:01:33] 2025-11-23 17:01:01,669 | INFO     | update_server=False
[2025-11-23 12:01:33] 2025-11-23 17:01:01,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 12:01:33] 2025-11-23 17:01:01,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:01:33] 2025-11-23 17:01:01,811 | INFO     | all payload control threads have been joined
[2025-11-23 12:01:33] 2025-11-23 17:01:01,935 | INFO     | all job control threads have been joined
[2025-11-23 12:01:33] 2025-11-23 17:01:02,124 | INFO     | all data control threads have been joined
[2025-11-23 12:01:33] 2025-11-23 17:01:02,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:01:33] 2025-11-23 17:01:02,198 | INFO     | aborting loop
[2025-11-23 12:01:33] 2025-11-23 17:01:02,670 | INFO     | [job] queue monitor thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:02,673 | INFO     | [job] retrieve thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:02,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:02,817 | INFO     | [payload] control thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:02,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 12:01:33] 2025-11-23 17:01:02,929 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:02,941 | INFO     | [job] control thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:02,982 | INFO     | [job] validate thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:03,129 | INFO     | [data] control thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:03,142 | INFO     | [payload] failed_post thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:03,204 | INFO     | [job] job monitor thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:03,347 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 12:01:33] 2025-11-23 17:01:03,636 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:03,930 | INFO     | [data] copytool_in thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:03,931 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:04,049 | INFO     | [payload] validate_post thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:04,895 | INFO     | [data] copytool_out thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:07,353 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 12:01:33] 2025-11-23 17:01:25,890 | INFO     | [monitor] cgroup control has ended
[2025-11-23 12:01:33] 2025-11-23 17:01:26,435 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710444549952)>', '<ExcThread(monitor, started 140709461993216)>']
[2025-11-23 12:01:33] 2025-11-23 17:01:31,458 | INFO     | all workflow threads have been joined
[2025-11-23 12:01:33] 2025-11-23 17:01:31,459 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 12:01:33] 2025-11-23 17:01:31,459 | INFO     | traces error code: 0
[2025-11-23 12:01:33] 2025-11-23 17:01:31,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 12:01:33] 2025-11-23 17:01:32,625 | INFO     | PID=26282 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 12:01:33] 2025-11-23 17:01:32,626 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 12:01:33] 2025-11-23 17:01:32,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 12:01:33] 2025-11-23 17:01:32,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 12:01:33] 2025-11-23 17:01:32,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 12:01:33] 2025-11-23 17:01:32,627 | CRITICAL | thread 'MainThread' is not alive
[2025-11-23 12:01:33] 2025-11-23 17:01:32,627 | INFO     | [monitor] control thread has ended
[2025-11-23 12:01:33] 2025-11-23 17:01:32,740 [wrapper] ==== pilot stdout END ====
[2025-11-23 12:01:33] 2025-11-23 17:01:32,745 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 12:01:33] 2025-11-23 17:01:32,749 [wrapper] pilotpid: 26282
[2025-11-23 12:01:33] 2025-11-23 17:01:32,754 [wrapper] Pilot exit status: 0
[2025-11-23 12:01:33] 2025-11-23 17:01:32,772 [wrapper] pandaids: 6895336842
[2025-11-23 12:01:33] 2025-11-23 17:01:32,818 [wrapper] cleanup supervisor_pilot  7985 26283
[2025-11-23 12:01:33] 2025-11-23 17:01:32,822 [wrapper] Test setup, not cleaning
[2025-11-23 12:01:33] 2025-11-23 17:01:32,827 [wrapper] apfmon messages muted
[2025-11-23 12:01:33] 2025-11-23 17:01:32,831 [wrapper] ==== wrapper stdout END ====
[2025-11-23 12:01:33] 2025-11-23 17:01:32,836 [wrapper] ==== wrapper stderr END ====
[2025-11-23 12:01:33]  *** Error codes and diagnostics ***
[2025-11-23 12:01:33]     "exeErrorCode": 0,
[2025-11-23 12:01:33]     "exeErrorDiag": "",
[2025-11-23 12:01:33]     "pilotErrorCode": 0,
[2025-11-23 12:01:33]     "pilotErrorDiag": "",
[2025-11-23 12:01:33]  *** Listing of results directory ***
[2025-11-23 12:01:33] total 1319552
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 00:46 pilot3.tar.gz
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 00:46 queuedata.json
[2025-11-23 12:01:33] -rwx------ 1 boincer umatlas     36292 Nov 22 00:47 runpilot2-wrapper.sh
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas       100 Nov 22 23:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 12:01:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 23:41 run_atlas
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas       105 Nov 22 23:41 job.xml
[2025-11-23 12:01:33] -rw-r--r-- 2 boincer umatlas 410594702 Nov 22 23:41 EVNT.47483658._000286.pool.root.1
[2025-11-23 12:01:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 23:41 start_atlas.sh
[2025-11-23 12:01:33] drwxrwx--x 2 boincer umatlas      4096 Nov 22 23:41 shared
[2025-11-23 12:01:33] -rw-r--r-- 2 boincer umatlas    590101 Nov 22 23:41 input.tar.gz
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas         0 Nov 22 23:41 boinc_lockfile
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 23:41 pandaJob.out
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas        57 Nov 22 23:41 setup.sh.local
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas    989784 Nov 22 23:42 agis_schedconf.cvmfs.json
[2025-11-23 12:01:33] drwx------ 5 boincer umatlas      4096 Nov 22 23:42 pilot3
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas       533 Nov 23 11:50 boinc_task_state.xml
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 11:58 init_data.xml
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas 920549152 Nov 23 12:00 HITS.47556137._002822.pool.root.1
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas      1064 Nov 23 12:00 memory_monitor_summary.json
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas   1526164 Nov 23 12:00 agis_ddmendpoints.agis.ALL.json
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas   1980037 Nov 23 12:00 log.47556137._002822.job.log.tgz.1
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas      8656 Nov 23 12:00 heartbeat.json
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 12:01 boinc_mmap_file
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas        29 Nov 23 12:01 wrapper_checkpoint.txt
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas        95 Nov 23 12:01 pilot_heartbeat.json
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas       815 Nov 23 12:01 pilotlog.txt
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas   6097908 Nov 23 12:01 log.47556137._002822.job.log.1
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas       353 Nov 23 12:01 output.list
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas       620 Nov 23 12:01 runtime_log
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas   8099840 Nov 23 12:01 result.tar.gz
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 12:01 runtime_log.err
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas       668 Nov 23 12:01 dSGODmZevg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrzHKDm3wKUWn.diag
[2025-11-23 12:01:33] -rw-r--r-- 1 boincer umatlas     21269 Nov 23 12:01 stderr.txt
[2025-11-23 12:01:33] HITS file was successfully produced:
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas 920549152 Nov 23 12:00 shared/HITS.pool.root.1
[2025-11-23 12:01:33]  *** Contents of shared directory: ***
[2025-11-23 12:01:33] total 1308460
[2025-11-23 12:01:33] -rw-r--r-- 2 boincer umatlas 410594702 Nov 22 23:41 ATLAS.root_0
[2025-11-23 12:01:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 23:41 start_atlas.sh
[2025-11-23 12:01:33] -rw-r--r-- 2 boincer umatlas    590101 Nov 22 23:41 input.tar.gz
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas 920549152 Nov 23 12:00 HITS.pool.root.1
[2025-11-23 12:01:33] -rw------- 1 boincer umatlas   8099840 Nov 23 12:01 result.tar.gz
12:01:34 (22468): run_atlas exited; CPU time 340409.055928
12:01:34 (22468): called boinc_finish(0)

</stderr_txt>
]]>

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