Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
01:22:50 (2805641): wrapper (7.7.26015): starting
01:22:50 (2805641): wrapper: running run_atlas (--nthreads 2)
[2025-11-23 01:22:50] Arguments: --nthreads 2
[2025-11-23 01:22:50] Threads: 2
[2025-11-23 01:22:50] Checking for CVMFS
[2025-11-23 01:22:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:22:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:22:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:22:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:22:50] 2.13.3.0 2192238 1814 44168 153191 3 72 3368097 4096001 803 130560 0 1110115 99.989 69673 1220 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-23 01:22:50] CVMFS is ok
[2025-11-23 01:22:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 01:22:50] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-23 01:22:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-23 01:22:50] Further information can be found at the LHC@home message board.
[2025-11-23 01:22:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:22:50] Checking for apptainer binary...
[2025-11-23 01:22:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 01:22:50] Running /usr/bin/apptainer --version
[2025-11-23 01:22:50] apptainer version 1.4.4
[2025-11-23 01:22:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:22:51] Ryzen-9-7950X3D-Zen4-Ubu24
[2025-11-23 01:22:51] apptainer works
[2025-11-23 01:22:51] Set ATHENA_PROC_NUMBER=2
[2025-11-23 01:22:51] Set ATHENA_CORE_NUMBER=2
[2025-11-23 01:22:51] Starting ATLAS job with PandaID=6895334043
[2025-11-23 01:22:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:01:38]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:01:38] 2025-11-23 16:00:53,853 | INFO     | time since job start (56274s) is within the limit (172800.0s)
[2025-11-23 17:01:38] 2025-11-23 16:00:54,483 | INFO     | monitor loop #4255: job 0:6895334043 is in state 'finished'
[2025-11-23 17:01:38] 2025-11-23 16:00:54,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 17:01:38] 2025-11-23 16:00:55,772 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 17:01:38] 2025-11-23 16:00:55,774 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4375.294437500001
[2025-11-23 17:01:38] 2025-11-23 16:00:55,777 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6895334043/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 17:01:38] 2025-11-23 16:00:55,778 | INFO     | extracted standard info from prmon json
[2025-11-23 17:01:38] 2025-11-23 16:00:55,778 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 17:01:38] 2025-11-23 16:00:55,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 17:01:38] 2025-11-23 16:00:55,784 | INFO     | fitting pss+swap vs Time
[2025-11-23 17:01:38] 2025-11-23 16:00:55,785 | INFO     | sum of square deviations: 243036037770.5
[2025-11-23 17:01:38] 2025-11-23 16:00:55,794 | INFO     | sum of deviations: 217387297529.00003
[2025-11-23 17:01:38] 2025-11-23 16:00:55,794 | INFO     | mean x: 1763885492.5
[2025-11-23 17:01:38] 2025-11-23 16:00:55,794 | INFO     | mean y: 1948253.2277657266
[2025-11-23 17:01:38] 2025-11-23 16:00:55,794 | INFO     | intersect: -1575786077.379098
[2025-11-23 17:01:38] 2025-11-23 16:00:55,794 | INFO     | chi2: 2.346002487416725
[2025-11-23 17:01:38] 2025-11-23 16:00:55,795 | INFO     | sum of square deviations: 239103489618.0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,803 | INFO     | sum of deviations: 301372934082.99994
[2025-11-23 17:01:38] 2025-11-23 16:00:55,803 | INFO     | mean x: 1763885340.0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,804 | INFO     | mean y: 1951502.9007633587
[2025-11-23 17:01:38] 2025-11-23 16:00:55,804 | INFO     | intersect: -2221300450.264254
[2025-11-23 17:01:38] 2025-11-23 16:00:55,804 | INFO     | chi2: 1.4419519078528578
[2025-11-23 17:01:38] 2025-11-23 16:00:55,804 | INFO     | current chi2=1.4419519078528578 (change=38.53578947221632 %)
[2025-11-23 17:01:38] 2025-11-23 16:00:55,804 | INFO     | sum of square deviations: 235213593428.0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,813 | INFO     | sum of deviations: 298201037234.0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,813 | INFO     | mean x: 1763885187.5
[2025-11-23 17:01:38] 2025-11-23 16:00:55,813 | INFO     | mean y: 1951378.5504385964
[2025-11-23 17:01:38] 2025-11-23 16:00:55,813 | INFO     | intersect: -2234281590.8472137
[2025-11-23 17:01:38] 2025-11-23 16:00:55,813 | INFO     | chi2: 1.4419426784005698
[2025-11-23 17:01:38] 2025-11-23 16:00:55,813 | INFO     | current chi2=1.4419426784005698 (change=0.0006400665818132222 %)
[2025-11-23 17:01:38] 2025-11-23 16:00:55,813 | INFO     | right removable region: 911
[2025-11-23 17:01:38] 2025-11-23 16:00:55,814 | INFO     | sum of square deviations: 239103489618.0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,822 | INFO     | sum of deviations: 117647145530.00005
[2025-11-23 17:01:38] 2025-11-23 16:00:55,822 | INFO     | mean x: 1763885645.0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,822 | INFO     | mean y: 1952109.0894220283
[2025-11-23 17:01:38] 2025-11-23 16:00:55,822 | INFO     | intersect: -865940331.5735224
[2025-11-23 17:01:38] 2025-11-23 16:00:55,823 | INFO     | chi2: 0.9665067801150468
[2025-11-23 17:01:38] 2025-11-23 16:00:55,823 | INFO     | current chi2=0.9665067801150468 (change=58.80197121277118 %)
[2025-11-23 17:01:38] 2025-11-23 16:00:55,823 | INFO     | sum of square deviations: 235213593428.0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,832 | INFO     | sum of deviations: 123662391520.00009
[2025-11-23 17:01:38] 2025-11-23 16:00:55,832 | INFO     | mean x: 1763885797.5
[2025-11-23 17:01:38] 2025-11-23 16:00:55,832 | INFO     | mean y: 1951873.9934210526
[2025-11-23 17:01:38] 2025-11-23 16:00:55,832 | INFO     | intersect: -925402420.918034
[2025-11-23 17:01:38] 2025-11-23 16:00:55,832 | INFO     | chi2: 0.9587734433517359
[2025-11-23 17:01:38] 2025-11-23 16:00:55,832 | INFO     | current chi2=0.9587734433517359 (change=0.8001326966780686 %)
[2025-11-23 17:01:38] 2025-11-23 16:00:55,832 | INFO     | left removable region: 20
[2025-11-23 17:01:38] 2025-11-23 16:00:55,833 | INFO     | sum of square deviations: 219336540390.0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,841 | INFO     | sum of deviations: 202547855649.99997
[2025-11-23 17:01:38] 2025-11-23 16:00:55,841 | INFO     | mean x: 1763885767.0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,841 | INFO     | mean y: 1955114.0707070706
[2025-11-23 17:01:38] 2025-11-23 16:00:55,841 | INFO     | intersect: -1626917480.9020467
[2025-11-23 17:01:38] 2025-11-23 16:00:55,841 | INFO     | chi2: 0.0488819070717226
[2025-11-23 17:01:38] 2025-11-23 16:00:55,841 | INFO     | current memory leak: 0.92 B/s (using 891 data points, chi2=0.05)
[2025-11-23 17:01:38] 2025-11-23 16:00:55,842 | INFO     | could have reported an average CPU frequency of 4453 MHz (34 samples)
[2025-11-23 17:01:38] 2025-11-23 16:00:55,842 | INFO     | ..............................
[2025-11-23 17:01:38] 2025-11-23 16:00:55,842 | INFO     | . Timing measurements:
[2025-11-23 17:01:38] 2025-11-23 16:00:55,842 | INFO     | . get job = 0 s
[2025-11-23 17:01:38] 2025-11-23 16:00:55,842 | INFO     | . initial setup = 1 s
[2025-11-23 17:01:38] 2025-11-23 16:00:55,842 | INFO     | . payload setup = 4 s
[2025-11-23 17:01:38] 2025-11-23 16:00:55,842 | INFO     | . stage-in = 0 s
[2025-11-23 17:01:38] 2025-11-23 16:00:55,842 | INFO     | . payload execution = 56245 s
[2025-11-23 17:01:38] 2025-11-23 16:00:55,842 | INFO     | . stage-out = 1 s
[2025-11-23 17:01:38] 2025-11-23 16:00:55,842 | INFO     | . log creation = 0 s
[2025-11-23 17:01:38] 2025-11-23 16:00:55,842 | INFO     | ..............................
[2025-11-23 17:01:38] 2025-11-23 16:00:55,865 | INFO     | time since job start (56276s) is within the limit (172800.0s)
[2025-11-23 17:01:38] 2025-11-23 16:00:55,886 | INFO     | 
[2025-11-23 17:01:38] 2025-11-23 16:00:55,886 | INFO     | job summary report
[2025-11-23 17:01:38] 2025-11-23 16:00:55,886 | INFO     | --------------------------------------------------
[2025-11-23 17:01:38] 2025-11-23 16:00:55,886 | INFO     | PanDA job id: 6895334043
[2025-11-23 17:01:38] 2025-11-23 16:00:55,886 | INFO     | task id: 47556137
[2025-11-23 17:01:38] 2025-11-23 16:00:55,886 | INFO     | errors: (none)
[2025-11-23 17:01:38] 2025-11-23 16:00:55,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 17:01:38] 2025-11-23 16:00:55,886 | INFO     | pilot state: finished 
[2025-11-23 17:01:38] 2025-11-23 16:00:55,886 | INFO     | transexitcode: 0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | exeerrorcode: 0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | exeerrordiag: 
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | exitcode: 0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | exitmsg: OK
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | cpuconsumptiontime: 112422 s
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | nevents: 1000
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | neventsw: 0
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | pid: 2816203
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | pgrp: 2816203
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | corecount: 2
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | event service: False
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | sizes: {0: 2298813, 3: 2299075, 10: 2299103, 56254: 2351079, 56256: 2360087, 56259: 2360143, 56263: 2360517}
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | --------------------------------------------------
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | 
[2025-11-23 17:01:38] 2025-11-23 16:00:55,887 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-23 17:01:38] 2025-11-23 16:00:55,902 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,902 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,902 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,902 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | job 6895334043 has completed (purged errors)
[2025-11-23 17:01:38] 2025-11-23 16:00:55,903 | INFO     | overall cleanup function is called
[2025-11-23 17:01:38] 2025-11-23 16:00:56,912 | INFO     | --- collectZombieJob: --- 10, [2816203]
[2025-11-23 17:01:38] 2025-11-23 16:00:56,912 | INFO     | zombie collector waiting for pid 2816203
[2025-11-23 17:01:38] 2025-11-23 16:00:56,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 17:01:38] 2025-11-23 16:00:56,912 | INFO     | collected zombie processes
[2025-11-23 17:01:38] 2025-11-23 16:00:56,912 | INFO     | will attempt to kill all subprocesses of pid=2816203
[2025-11-23 17:01:38] 2025-11-23 16:00:56,969 | INFO     | process IDs to be killed: [2816203] (in reverse order)
[2025-11-23 17:01:38] 2025-11-23 16:00:57,012 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 17:01:38] 2025-11-23 16:00:57,013 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 17:01:38] 2025-11-23 16:00:57,014 | INFO     | did not find any defunct processes belonging to 2816203
[2025-11-23 17:01:38] 2025-11-23 16:00:57,016 | INFO     | did not find any defunct processes belonging to 2816203
[2025-11-23 17:01:38] 2025-11-23 16:00:57,017 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 17:01:38] 2025-11-23 16:00:57,017 | INFO     | ready for new job
[2025-11-23 17:01:38] 2025-11-23 16:00:57,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 17:01:38] 2025-11-23 16:00:57,020 | INFO     | ***************************************
[2025-11-23 17:01:38] 2025-11-23 16:00:57,020 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 17:01:38] 2025-11-23 16:00:57,020 | INFO     | ***************************************
[2025-11-23 17:01:38] 2025-11-23 16:00:57,020 | INFO     | 
[2025-11-23 17:01:38] 2025-11-23 16:00:57,021 | INFO     | architecture information:
[2025-11-23 17:01:38] 2025-11-23 16:00:57,022 | INFO     | executing command: cat /etc/os-release
[2025-11-23 17:01:38] 2025-11-23 16:00:57,038 | INFO     | cat /etc/os-release:
[2025-11-23 17:01:38] NAME="CentOS Linux"
[2025-11-23 17:01:38] VERSION="7 (Core)"
[2025-11-23 17:01:38] ID="centos"
[2025-11-23 17:01:38] ID_LIKE="rhel fedora"
[2025-11-23 17:01:38] VERSION_ID="7"
[2025-11-23 17:01:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 17:01:38] ANSI_COLOR="0;31"
[2025-11-23 17:01:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 17:01:38] HOME_URL="https://www.centos.org/"
[2025-11-23 17:01:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 17:01:38] 
[2025-11-23 17:01:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 17:01:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 17:01:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 17:01:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:01:38] 
[2025-11-23 17:01:38] 2025-11-23 16:00:57,038 | INFO     | ***************************************
[2025-11-23 17:01:38] 2025-11-23 16:00:57,541 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-23 17:01:38] 2025-11-23 16:00:57,562 | INFO     | sufficient remaining disk space (1762950905856 B)
[2025-11-23 17:01:38] 2025-11-23 16:00:57,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:01:38] 2025-11-23 16:00:57,562 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:01:38] 2025-11-23 16:00:57,562 | INFO     | update_server=False
[2025-11-23 17:01:38] 2025-11-23 16:00:57,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:01:38] 2025-11-23 16:00:57,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:01:38] 2025-11-23 16:00:57,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:01:38] 2025-11-23 16:00:57,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:01:38] 2025-11-23 16:00:57,563 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 17:01:38] 2025-11-23 16:00:57,565 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:01:38] 2025-11-23 16:00:57,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:01:38] 2025-11-23 16:00:57,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:01:38] 2025-11-23 16:00:57,593 | INFO     | all job control threads have been joined
[2025-11-23 17:01:38] 2025-11-23 16:00:57,696 | INFO     | all data control threads have been joined
[2025-11-23 17:01:38] 2025-11-23 16:00:57,984 | INFO     | all payload control threads have been joined
[2025-11-23 17:01:38] 2025-11-23 16:00:57,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:01:38] 2025-11-23 16:00:57,992 | INFO     | aborting loop
[2025-11-23 17:01:38] 2025-11-23 16:00:58,567 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:58,569 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:58,598 | INFO     | [job] control thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:58,701 | INFO     | [data] control thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:58,727 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:58,834 | INFO     | [job] validate thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:58,980 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:58,989 | INFO     | [payload] control thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:58,997 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:59,065 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:59,189 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:59,439 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:59,449 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:59,569 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:00:59,646 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:01:01,570 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:01:38] 2025-11-23 16:01:31,638 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:01:38] 2025-11-23 16:01:33,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127648166598464)>', '<ExcThread(monitor, started 127647686317824)>']
[2025-11-23 17:01:38] 2025-11-23 16:01:33,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:01:38] 2025-11-23 16:01:33,748 | INFO     | [monitor] control thread has ended
[2025-11-23 17:01:38] 2025-11-23 16:01:38,157 | INFO     | all workflow threads have been joined
[2025-11-23 17:01:38] 2025-11-23 16:01:38,157 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:01:38] 2025-11-23 16:01:38,157 | INFO     | traces error code: 0
[2025-11-23 17:01:38] 2025-11-23 16:01:38,157 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:01:38] 2025-11-23 16:01:38,227 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:01:38] 2025-11-23 16:01:38,234 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:01:38] 2025-11-23 16:01:38,236 [wrapper] pilotpid: 2809503
[2025-11-23 17:01:38] 2025-11-23 16:01:38,242 [wrapper] Pilot exit status: 0
[2025-11-23 17:01:38] 2025-11-23 16:01:38,250 [wrapper] pandaids: 6895334043
[2025-11-23 17:01:38] 2025-11-23 16:01:38,282 [wrapper] cleanup supervisor_pilot 3125997 2809504
[2025-11-23 17:01:38] 2025-11-23 16:01:38,284 [wrapper] Test setup, not cleaning
[2025-11-23 17:01:38] 2025-11-23 16:01:38,287 [wrapper] apfmon messages muted
[2025-11-23 17:01:38] 2025-11-23 16:01:38,294 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:01:38] 2025-11-23 16:01:38,299 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:01:38]  *** Error codes and diagnostics ***
[2025-11-23 17:01:38]     "exeErrorCode": 0,
[2025-11-23 17:01:38]     "exeErrorDiag": "",
[2025-11-23 17:01:38]     "pilotErrorCode": 0,
[2025-11-23 17:01:38]     "pilotErrorDiag": "",
[2025-11-23 17:01:38]  *** Listing of results directory ***
[2025-11-23 17:01:38] total 1326476
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc    576529 Nov 22 03:10 pilot3.tar.gz
[2025-11-23 17:01:38] -rwx------ 1 boinc boinc     36292 Nov 22 03:25 runpilot2-wrapper.sh
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc      5112 Nov 22 03:25 queuedata.json
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc       100 Nov 23 01:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:01:38] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 01:22 run_atlas
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc       105 Nov 23 01:22 job.xml
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc      9569 Nov 23 01:22 init_data.xml
[2025-11-23 17:01:38] -rw-r--r-- 2 boinc boinc 411130666 Nov 23 01:22 EVNT.47483658._000221.pool.root.1
[2025-11-23 17:01:38] -rw-r--r-- 2 boinc boinc     15847 Nov 23 01:22 start_atlas.sh
[2025-11-23 17:01:38] drwxrwx--x 2 boinc boinc      4096 Nov 23 01:22 shared
[2025-11-23 17:01:38] -rw-r--r-- 2 boinc boinc    590096 Nov 23 01:22 input.tar.gz
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc         0 Nov 23 01:22 boinc_lockfile
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc      2785 Nov 23 01:22 pandaJob.out
[2025-11-23 17:01:38] -rw------- 1 boinc boinc    989784 Nov 23 01:22 agis_schedconf.cvmfs.json
[2025-11-23 17:01:38] drwx------ 5 boinc boinc      4096 Nov 23 01:22 pilot3
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc       532 Nov 23 16:55 boinc_task_state.xml
[2025-11-23 17:01:38] -rw------- 1 boinc boinc 924268582 Nov 23 17:00 HITS.47556137._002173.pool.root.1
[2025-11-23 17:01:38] -rw------- 1 boinc boinc        95 Nov 23 17:00 pilot_heartbeat.json
[2025-11-23 17:01:38] -rw------- 1 boinc boinc      1033 Nov 23 17:00 memory_monitor_summary.json
[2025-11-23 17:01:38] -rw------- 1 boinc boinc   1526164 Nov 23 17:00 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:01:38] -rw------- 1 boinc boinc   1381951 Nov 23 17:00 log.47556137._002173.job.log.tgz.1
[2025-11-23 17:01:38] -rw------- 1 boinc boinc      8578 Nov 23 17:00 heartbeat.json
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc      8192 Nov 23 17:01 boinc_mmap_file
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc        29 Nov 23 17:01 wrapper_checkpoint.txt
[2025-11-23 17:01:38] -rw------- 1 boinc boinc      4561 Nov 23 17:01 pilotlog.txt
[2025-11-23 17:01:38] -rw------- 1 boinc boinc   8109951 Nov 23 17:01 log.47556137._002173.job.log.1
[2025-11-23 17:01:38] -rw------- 1 boinc boinc       353 Nov 23 17:01 output.list
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc       620 Nov 23 17:01 runtime_log
[2025-11-23 17:01:38] -rw------- 1 boinc boinc   9512960 Nov 23 17:01 result.tar.gz
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc      8970 Nov 23 17:01 runtime_log.err
[2025-11-23 17:01:38] -rw------- 1 boinc boinc       667 Nov 23 17:01 jFrMDmAVsg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXsJKDmbMrK2n.diag
[2025-11-23 17:01:38] -rw-r--r-- 1 boinc boinc     21313 Nov 23 17:01 stderr.txt
[2025-11-23 17:01:38] HITS file was successfully produced:
[2025-11-23 17:01:38] -rw------- 1 boinc boinc 924268582 Nov 23 17:00 shared/HITS.pool.root.1
[2025-11-23 17:01:38]  *** Contents of shared directory: ***
[2025-11-23 17:01:38] total 1314000
[2025-11-23 17:01:38] -rw-r--r-- 2 boinc boinc 411130666 Nov 23 01:22 ATLAS.root_0
[2025-11-23 17:01:38] -rw-r--r-- 2 boinc boinc     15847 Nov 23 01:22 start_atlas.sh
[2025-11-23 17:01:38] -rw-r--r-- 2 boinc boinc    590096 Nov 23 01:22 input.tar.gz
[2025-11-23 17:01:38] -rw------- 1 boinc boinc 924268582 Nov 23 17:00 HITS.pool.root.1
[2025-11-23 17:01:38] -rw------- 1 boinc boinc   9512960 Nov 23 17:01 result.tar.gz
17:01:40 (2805641): run_atlas exited; CPU time 112391.720683
17:01:40 (2805641): called boinc_finish(0)

</stderr_txt>
]]>

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