Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:15:14 (7210): wrapper (7.7.26015): starting
14:15:14 (7210): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 14:15:14] Arguments: --nthreads 8
[2025-11-25 14:15:14] Threads: 8
[2025-11-25 14:15:14] Checking for CVMFS
[2025-11-25 14:15:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 14:15:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 14:15:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 14:15:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 14:15:20] 2.11.2.0 20606 80092 96732 153283 1 85 13965476 25165825 4632 130560 12 25782018 99.894 14817594 1526 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 14:15:20] CVMFS is ok
[2025-11-25 14:15:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 14:15:20] Checking for apptainer binary...
[2025-11-25 14:15:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 14:15:20] Running /usr/bin/apptainer --version
[2025-11-25 14:15:20] apptainer version 1.3.2-1.el7
[2025-11-25 14:15:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 14:15:22] cg-vwn476.simple-grid.lan
[2025-11-25 14:15:22] apptainer works
[2025-11-25 14:15:22] Set ATHENA_PROC_NUMBER=8
[2025-11-25 14:15:22] Set ATHENA_CORE_NUMBER=8
[2025-11-25 14:15:23] Starting ATLAS job with PandaID=6895332472
[2025-11-25 14:15:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:07:27]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:07:27] 2025-11-26 11:06:17,388 | INFO     | time since job start (78436s) is within the limit (172800.0s)
[2025-11-26 12:07:27] 2025-11-26 11:06:18,377 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 12:07:27] 2025-11-26 11:06:18,378 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-26 12:07:27] 2025-11-26 11:06:18,381 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6895332472/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 12:07:27] 2025-11-26 11:06:18,382 | INFO     | extracted standard info from prmon json
[2025-11-26 12:07:27] 2025-11-26 11:06:18,382 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:07:27] 2025-11-26 11:06:18,382 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:07:27] 2025-11-26 11:06:18,405 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:07:27] 2025-11-26 11:06:18,407 | INFO     | sum of square deviations: 647246990377.886
[2025-11-26 12:07:27] 2025-11-26 11:06:18,450 | INFO     | sum of deviations: 3291803474219.5366
[2025-11-26 12:07:27] 2025-11-26 11:06:18,450 | INFO     | mean x: 1764116202.657277
[2025-11-26 12:07:27] 2025-11-26 11:06:18,450 | INFO     | mean y: 2859786.0172143974
[2025-11-26 12:07:27] 2025-11-26 11:06:18,450 | INFO     | intersect: -8969177057.976133
[2025-11-26 12:07:27] 2025-11-26 11:06:18,452 | INFO     | chi2: 13.9094673180493
[2025-11-26 12:07:27] 2025-11-26 11:06:18,454 | INFO     | sum of square deviations: 639680313538.6647
[2025-11-26 12:07:27] 2025-11-26 11:06:18,496 | INFO     | sum of deviations: 3711127839083.065
[2025-11-26 12:07:27] 2025-11-26 11:06:18,496 | INFO     | mean x: 1764116050.1618226
[2025-11-26 12:07:27] 2025-11-26 11:06:18,497 | INFO     | mean y: 2868235.5773762767
[2025-11-26 12:07:27] 2025-11-26 11:06:18,497 | INFO     | intersect: -10231713080.380348
[2025-11-26 12:07:27] 2025-11-26 11:06:18,498 | INFO     | chi2: 10.902993121398715
[2025-11-26 12:07:27] 2025-11-26 11:06:18,498 | INFO     | current chi2=10.902993121398715 (change=21.614589027067215 %)
[2025-11-26 12:07:27] 2025-11-26 11:06:18,498 | INFO     | right removable region: 1272
[2025-11-26 12:07:27] 2025-11-26 11:06:18,500 | INFO     | sum of square deviations: 639679411348.6646
[2025-11-26 12:07:27] 2025-11-26 11:06:18,541 | INFO     | sum of deviations: 2768804797869.9014
[2025-11-26 12:07:27] 2025-11-26 11:06:18,542 | INFO     | mean x: 1764116355.1618226
[2025-11-26 12:07:27] 2025-11-26 11:06:18,542 | INFO     | mean y: 2870324.5247446974
[2025-11-26 12:07:27] 2025-11-26 11:06:18,542 | INFO     | intersect: -7632976228.476893
[2025-11-26 12:07:27] 2025-11-26 11:06:18,543 | INFO     | chi2: 9.44998020921331
[2025-11-26 12:07:27] 2025-11-26 11:06:18,543 | INFO     | current chi2=9.44998020921331 (change=32.06080439219437 %)
[2025-11-26 12:07:27] 2025-11-26 11:06:18,545 | INFO     | sum of square deviations: 632171042731.8893
[2025-11-26 12:07:27] 2025-11-26 11:06:18,588 | INFO     | sum of deviations: 2326239354680.717
[2025-11-26 12:07:27] 2025-11-26 11:06:18,588 | INFO     | mean x: 1764116507.6664038
[2025-11-26 12:07:27] 2025-11-26 11:06:18,588 | INFO     | mean y: 2879313.1293375394
[2025-11-26 12:07:27] 2025-11-26 11:06:18,589 | INFO     | intersect: -6488650619.404987
[2025-11-26 12:07:27] 2025-11-26 11:06:18,590 | INFO     | chi2: 6.385198868375719
[2025-11-26 12:07:27] 2025-11-26 11:06:18,590 | INFO     | current chi2=6.385198868375719 (change=32.43161650063103 %)
[2025-11-26 12:07:27] 2025-11-26 11:06:18,592 | INFO     | sum of square deviations: 624721806297.74
[2025-11-26 12:07:27] 2025-11-26 11:06:18,632 | INFO     | sum of deviations: 2094315209038.024
[2025-11-26 12:07:27] 2025-11-26 11:06:18,633 | INFO     | mean x: 1764116660.169438
[2025-11-26 12:07:27] 2025-11-26 11:06:18,633 | INFO     | mean y: 2884056.135391924
[2025-11-26 12:07:27] 2025-11-26 11:06:18,633 | INFO     | intersect: -5911134495.266633
[2025-11-26 12:07:27] 2025-11-26 11:06:18,634 | INFO     | chi2: 5.426577306684919
[2025-11-26 12:07:27] 2025-11-26 11:06:18,635 | INFO     | current chi2=5.426577306684919 (change=15.013182540619221 %)
[2025-11-26 12:07:27] 2025-11-26 11:06:18,635 | INFO     | left removable region: 30
[2025-11-26 12:07:27] 2025-11-26 11:06:18,636 | INFO     | sum of square deviations: 594075388015.5295
[2025-11-26 12:07:27] 2025-11-26 11:06:18,676 | INFO     | sum of deviations: 2419879037794.322
[2025-11-26 12:07:27] 2025-11-26 11:06:18,676 | INFO     | mean x: 1764116934.6771336
[2025-11-26 12:07:27] 2025-11-26 11:06:18,676 | INFO     | mean y: 2898863.078099839
[2025-11-26 12:07:27] 2025-11-26 11:06:18,677 | INFO     | intersect: -7182972958.178997
[2025-11-26 12:07:27] 2025-11-26 11:06:18,678 | INFO     | chi2: 1.4413445349006875
[2025-11-26 12:07:27] 2025-11-26 11:06:18,678 | INFO     | current memory leak: 4.07 B/s (using 1242 data points, chi2=1.44)
[2025-11-26 12:07:27] 2025-11-26 11:06:18,680 | INFO     | could have reported an average CPU frequency of 2249 MHz (44 samples)
[2025-11-26 12:07:27] 2025-11-26 11:06:18,680 | INFO     | ..............................
[2025-11-26 12:07:27] 2025-11-26 11:06:18,680 | INFO     | . Timing measurements:
[2025-11-26 12:07:27] 2025-11-26 11:06:18,680 | INFO     | . get job = 0 s
[2025-11-26 12:07:27] 2025-11-26 11:06:18,680 | INFO     | . initial setup = 3 s
[2025-11-26 12:07:27] 2025-11-26 11:06:18,680 | INFO     | . payload setup = 155 s
[2025-11-26 12:07:27] 2025-11-26 11:06:18,680 | INFO     | . stage-in = 0 s
[2025-11-26 12:07:27] 2025-11-26 11:06:18,680 | INFO     | . payload execution = 78072 s
[2025-11-26 12:07:27] 2025-11-26 11:06:18,680 | INFO     | . stage-out = 3 s
[2025-11-26 12:07:27] 2025-11-26 11:06:18,681 | INFO     | . log creation = 0 s
[2025-11-26 12:07:27] 2025-11-26 11:06:18,681 | INFO     | ..............................
[2025-11-26 12:07:27] 2025-11-26 11:06:18,789 | INFO     | 
[2025-11-26 12:07:27] 2025-11-26 11:06:18,789 | INFO     | job summary report
[2025-11-26 12:07:27] 2025-11-26 11:06:18,789 | INFO     | --------------------------------------------------
[2025-11-26 12:07:27] 2025-11-26 11:06:18,789 | INFO     | PanDA job id: 6895332472
[2025-11-26 12:07:27] 2025-11-26 11:06:18,789 | INFO     | task id: 47556137
[2025-11-26 12:07:27] 2025-11-26 11:06:18,789 | INFO     | errors: (none)
[2025-11-26 12:07:27] 2025-11-26 11:06:18,789 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:07:27] 2025-11-26 11:06:18,790 | INFO     | pilot state: finished 
[2025-11-26 12:07:27] 2025-11-26 11:06:18,790 | INFO     | transexitcode: 0
[2025-11-26 12:07:27] 2025-11-26 11:06:18,790 | INFO     | exeerrorcode: 0
[2025-11-26 12:07:27] 2025-11-26 11:06:18,790 | INFO     | exeerrordiag: 
[2025-11-26 12:07:27] 2025-11-26 11:06:18,790 | INFO     | exitcode: 0
[2025-11-26 12:07:27] 2025-11-26 11:06:18,790 | INFO     | exitmsg: OK
[2025-11-26 12:07:27] 2025-11-26 11:06:18,790 | INFO     | cpuconsumptiontime: 295870 s
[2025-11-26 12:07:27] 2025-11-26 11:06:18,790 | INFO     | nevents: 1000
[2025-11-26 12:07:27] 2025-11-26 11:06:18,790 | INFO     | neventsw: 0
[2025-11-26 12:07:27] 2025-11-26 11:06:18,790 | INFO     | pid: 17503
[2025-11-26 12:07:27] 2025-11-26 11:06:18,790 | INFO     | pgrp: 17503
[2025-11-26 12:07:27] 2025-11-26 11:06:18,790 | INFO     | corecount: 8
[2025-11-26 12:07:27] 2025-11-26 11:06:18,791 | INFO     | event service: False
[2025-11-26 12:07:27] 2025-11-26 11:06:18,791 | INFO     | sizes: {0: 2284145, 1: 2284344, 12: 2284344, 23: 2284372, 33: 2284400, 44: 2284456, 55: 2284612, 66: 2284640, 76: 2284668, 87: 2284724, 95: 2285014, 98: 2285322, 7
[2025-11-26 12:07:27] 2025-11-26 11:06:18,791 | INFO     | --------------------------------------------------
[2025-11-26 12:07:27] 2025-11-26 11:06:18,791 | INFO     | 
[2025-11-26 12:07:27] 2025-11-26 11:06:18,791 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-26 12:07:27] 2025-11-26 11:06:18,925 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,926 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,926 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:07:27] 2025-11-26 11:06:18,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,926 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:07:27] 2025-11-26 11:06:18,927 | INFO     | job 6895332472 has completed (purged errors)
[2025-11-26 12:07:27] 2025-11-26 11:06:18,927 | INFO     | overall cleanup function is called
[2025-11-26 12:07:27] 2025-11-26 11:06:19,943 | INFO     | --- collectZombieJob: --- 10, [17503]
[2025-11-26 12:07:27] 2025-11-26 11:06:19,943 | INFO     | zombie collector waiting for pid 17503
[2025-11-26 12:07:27] 2025-11-26 11:06:19,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:07:27] 2025-11-26 11:06:19,944 | INFO     | collected zombie processes
[2025-11-26 12:07:27] 2025-11-26 11:06:19,944 | INFO     | will attempt to kill all subprocesses of pid=17503
[2025-11-26 12:07:27] 2025-11-26 11:06:20,033 | INFO     | process IDs to be killed: [17503] (in reverse order)
[2025-11-26 12:07:27] 2025-11-26 11:06:20,193 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:07:27] 2025-11-26 11:06:20,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:07:27] 2025-11-26 11:06:20,196 | INFO     | did not find any defunct processes belonging to 17503
[2025-11-26 12:07:27] 2025-11-26 11:06:20,199 | INFO     | did not find any defunct processes belonging to 17503
[2025-11-26 12:07:27] 2025-11-26 11:06:20,200 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:07:27] 2025-11-26 11:06:20,200 | INFO     | ready for new job
[2025-11-26 12:07:27] 2025-11-26 11:06:20,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:07:27] 2025-11-26 11:06:20,205 | INFO     | ***************************************
[2025-11-26 12:07:27] 2025-11-26 11:06:20,206 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:07:27] 2025-11-26 11:06:20,206 | INFO     | ***************************************
[2025-11-26 12:07:27] 2025-11-26 11:06:20,206 | INFO     | 
[2025-11-26 12:07:27] 2025-11-26 11:06:20,206 | INFO     | pilot is running in a VM
[2025-11-26 12:07:27] 2025-11-26 11:06:20,207 | INFO     | architecture information:
[2025-11-26 12:07:27] 2025-11-26 11:06:20,207 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:07:27] 2025-11-26 11:06:20,243 | INFO     | cat /etc/os-release:
[2025-11-26 12:07:27] NAME="CentOS Linux"
[2025-11-26 12:07:27] VERSION="7 (Core)"
[2025-11-26 12:07:27] ID="centos"
[2025-11-26 12:07:27] ID_LIKE="rhel fedora"
[2025-11-26 12:07:27] VERSION_ID="7"
[2025-11-26 12:07:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:07:27] ANSI_COLOR="0;31"
[2025-11-26 12:07:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:07:27] HOME_URL="https://www.centos.org/"
[2025-11-26 12:07:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:07:27] 
[2025-11-26 12:07:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:07:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:07:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:07:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:07:27] 
[2025-11-26 12:07:27] 2025-11-26 11:06:20,243 | INFO     | ***************************************
[2025-11-26 12:07:27] 2025-11-26 11:06:20,746 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-26 12:07:27] 2025-11-26 11:06:20,837 | INFO     | sufficient remaining disk space (494872297472 B)
[2025-11-26 12:07:27] 2025-11-26 11:06:20,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:07:27] 2025-11-26 11:06:20,838 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:07:27] 2025-11-26 11:06:20,838 | INFO     | update_server=False
[2025-11-26 12:07:27] 2025-11-26 11:06:20,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:07:27] 2025-11-26 11:06:20,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:07:27] 2025-11-26 11:06:20,839 | INFO     | aborting loop
[2025-11-26 12:07:27] 2025-11-26 11:06:20,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:07:27] 2025-11-26 11:06:21,370 | INFO     | all data control threads have been joined
[2025-11-26 12:07:27] 2025-11-26 11:06:21,789 | INFO     | all payload control threads have been joined
[2025-11-26 12:07:27] 2025-11-26 11:06:21,843 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:21,845 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:21,852 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:22,168 | INFO     | all job control threads have been joined
[2025-11-26 12:07:27] 2025-11-26 11:06:22,338 | INFO     | [job] validate thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:22,376 | INFO     | [data] control thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:22,406 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:22,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:07:27] 2025-11-26 11:06:22,577 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:22,589 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:22,794 | INFO     | [payload] control thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:22,891 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:23,173 | INFO     | [job] control thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:23,267 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:23,324 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:23,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:07:27] 2025-11-26 11:06:24,809 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:26,424 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:31,864 | INFO     | job.realtimelogging is not enabled
[2025-11-26 12:07:27] 2025-11-26 11:06:32,870 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:07:27] 2025-11-26 11:06:50,693 | INFO     | PID=10963 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 12:07:27] 2025-11-26 11:06:50,694 | INFO     | .. there are 9 such processes running
[2025-11-26 12:07:27] 2025-11-26 11:06:50,694 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:07:27] 2025-11-26 11:06:50,694 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:07:27] 2025-11-26 11:06:50,694 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:07:27] 2025-11-26 11:07:17,604 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:07:27] 2025-11-26 11:07:17,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858920257344)>', '<ExcThread(monitor, started 139858337056512)>']
[2025-11-26 12:07:27] 2025-11-26 11:07:17,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:07:27] 2025-11-26 11:07:17,851 | INFO     | [monitor] control thread has ended
[2025-11-26 12:07:27] 2025-11-26 11:07:22,704 | INFO     | all workflow threads have been joined
[2025-11-26 12:07:27] 2025-11-26 11:07:22,704 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:07:27] 2025-11-26 11:07:22,705 | INFO     | traces error code: 0
[2025-11-26 12:07:27] 2025-11-26 11:07:22,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:07:27] 2025-11-26 11:07:23,028 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:07:27] 2025-11-26 11:07:23,125 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:07:27] 2025-11-26 11:07:23,215 [wrapper] pilotpid: 10963
[2025-11-26 12:07:27] 2025-11-26 11:07:23,318 [wrapper] Pilot exit status: 0
[2025-11-26 12:07:27] 2025-11-26 11:07:23,757 [wrapper] pandaids: 6895332472
[2025-11-26 12:07:27] 2025-11-26 11:07:24,569 [wrapper] cleanup supervisor_pilot 11944 10964
[2025-11-26 12:07:27] 2025-11-26 11:07:24,653 [wrapper] Test setup, not cleaning
[2025-11-26 12:07:27] 2025-11-26 11:07:24,747 [wrapper] apfmon messages muted
[2025-11-26 12:07:27] 2025-11-26 11:07:24,847 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:07:27] 2025-11-26 11:07:24,951 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:07:27]  *** Error codes and diagnostics ***
[2025-11-26 12:07:27]     "exeErrorCode": 0,
[2025-11-26 12:07:27]     "exeErrorDiag": "",
[2025-11-26 12:07:27]     "pilotErrorCode": 0,
[2025-11-26 12:07:27]     "pilotErrorDiag": "",
[2025-11-26 12:07:27]  *** Listing of results directory ***
[2025-11-26 12:07:27] total 1319004
[2025-11-26 12:07:27] -rwx------. 1 boinc boinc     36292 Nov 22 01:25 runpilot2-wrapper.sh
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc      5112 Nov 22 01:25 queuedata.json
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc    576529 Nov 22 01:25 pilot3.tar.gz
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc       100 Nov 25 14:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:07:27] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 14:15 run_atlas
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc       105 Nov 25 14:15 job.xml
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc      6393 Nov 25 14:15 init_data.xml
[2025-11-26 12:07:27] -rw-r--r--. 2 boinc boinc 410367938 Nov 25 14:15 EVNT.47483658._000191.pool.root.1
[2025-11-26 12:07:27] -rw-r--r--. 2 boinc boinc     15847 Nov 25 14:15 start_atlas.sh
[2025-11-26 12:07:27] drwxrwx--x. 2 boinc boinc        68 Nov 25 14:15 shared
[2025-11-26 12:07:27] -rw-r--r--. 2 boinc boinc    590092 Nov 25 14:15 input.tar.gz
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc         0 Nov 25 14:15 boinc_lockfile
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc      2786 Nov 25 14:15 pandaJob.out
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc    991909 Nov 25 14:18 agis_schedconf.cvmfs.json
[2025-11-26 12:07:27] drwx------. 5 boinc boinc      4096 Nov 25 14:19 pilot3
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc       533 Nov 26 11:53 boinc_task_state.xml
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc 910626649 Nov 26 12:05 HITS.47556137._001903.pool.root.1
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc      1031 Nov 26 12:06 memory_monitor_summary.json
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc   1516240 Nov 26 12:06 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc   2401158 Nov 26 12:06 log.47556137._001903.job.log.tgz.1
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc        95 Nov 26 12:06 pilot_heartbeat.json
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc      8621 Nov 26 12:06 heartbeat.json
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc        29 Nov 26 12:07 wrapper_checkpoint.txt
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc      8192 Nov 26 12:07 boinc_mmap_file
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc      4957 Nov 26 12:07 pilotlog.txt
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc  10478612 Nov 26 12:07 log.47556137._001903.job.log.1
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc       353 Nov 26 12:07 output.list
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc       620 Nov 26 12:07 runtime_log
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc  12902400 Nov 26 12:07 result.tar.gz
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc      8833 Nov 26 12:07 runtime_log.err
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc       662 Nov 26 12:07 mBXKDm8bqg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmksHKDmAjHdEo.diag
[2025-11-26 12:07:27] -rw-r--r--. 1 boinc boinc     20957 Nov 26 12:07 stderr.txt
[2025-11-26 12:07:27] HITS file was successfully produced:
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc 910626649 Nov 26 12:05 shared/HITS.pool.root.1
[2025-11-26 12:07:27]  *** Contents of shared directory: ***
[2025-11-26 12:07:27] total 1303232
[2025-11-26 12:07:27] -rw-r--r--. 2 boinc boinc 410367938 Nov 25 14:15 ATLAS.root_0
[2025-11-26 12:07:27] -rw-r--r--. 2 boinc boinc     15847 Nov 25 14:15 start_atlas.sh
[2025-11-26 12:07:27] -rw-r--r--. 2 boinc boinc    590092 Nov 25 14:15 input.tar.gz
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc 910626649 Nov 26 12:05 HITS.pool.root.1
[2025-11-26 12:07:27] -rw-------. 1 boinc boinc  12902400 Nov 26 12:07 result.tar.gz
12:07:29 (7210): run_atlas exited; CPU time 296259.399787
12:07:29 (7210): called boinc_finish(0)

</stderr_txt>
]]>

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