Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:04:06 (3724070): wrapper (7.7.26015): starting
19:04:06 (3724070): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 19:04:06] Arguments: --nthreads 8
[2025-11-22 19:04:06] Threads: 8
[2025-11-22 19:04:06] Checking for CVMFS
[2025-11-22 19:04:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 19:04:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 19:04:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 19:04:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 19:04:08] 2.13.2.0 14352 29303 163644 153190 2 500 34527776 40960001 30766 16776704 0 231779614 99.680 178819876 47013 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 19:04:08] CVMFS is ok
[2025-11-22 19:04:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 19:04:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 19:04:08] Further information can be found at the LHC@home message board.
[2025-11-22 19:04:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 19:04:08] Checking for apptainer binary...
[2025-11-22 19:04:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 19:04:08] Running /usr/bin/apptainer --version
[2025-11-22 19:04:10] apptainer version 1.4.4-1.el9
[2025-11-22 19:04:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 19:04:13] c-208-36.aglt2.org
[2025-11-22 19:04:13] apptainer works
[2025-11-22 19:04:13] Set ATHENA_PROC_NUMBER=8
[2025-11-22 19:04:13] Set ATHENA_CORE_NUMBER=8
[2025-11-22 19:04:13] Starting ATLAS job with PandaID=6894267748
[2025-11-22 19:04:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 07:42:03]  *** The last 200 lines of the pilot log: ***
[2025-11-23 07:42:03] 2025-11-23 12:41:08,849 | INFO     | monitor loop #2704: job 0:6894267748 is in state 'finished'
[2025-11-23 07:42:03] 2025-11-23 12:41:08,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:42:03] 2025-11-23 12:41:11,588 | INFO     | monitor loop #2705: job 0:6894267748 is in state 'finished'
[2025-11-23 07:42:03] 2025-11-23 12:41:11,588 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:42:03] 2025-11-23 12:41:12,219 | INFO     | PID=3733484 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 07:42:03] 2025-11-23 12:41:12,219 | INFO     | .. there are 37 such processes running
[2025-11-23 07:42:03] 2025-11-23 12:41:13,223 | INFO     | time since job start (45337s) is within the limit (172800.0s)
[2025-11-23 07:42:03] 2025-11-23 12:41:14,112 | INFO     | monitor loop #2706: job 0:6894267748 is in state 'finished'
[2025-11-23 07:42:03] 2025-11-23 12:41:14,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:42:03] 2025-11-23 12:41:15,230 | INFO     | time since job start (45339s) is within the limit (172800.0s)
[2025-11-23 07:42:03] 2025-11-23 12:41:16,621 | INFO     | monitor loop #2707: job 0:6894267748 is in state 'finished'
[2025-11-23 07:42:03] 2025-11-23 12:41:16,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:42:03] 2025-11-23 12:41:17,236 | INFO     | time since job start (45341s) is within the limit (172800.0s)
[2025-11-23 07:42:03] 2025-11-23 12:41:19,128 | INFO     | monitor loop #2708: job 0:6894267748 is in state 'finished'
[2025-11-23 07:42:03] 2025-11-23 12:41:19,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:42:03] 2025-11-23 12:41:19,243 | INFO     | time since job start (45343s) is within the limit (172800.0s)
[2025-11-23 07:42:03] 2025-11-23 12:41:21,028 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 07:42:03] 2025-11-23 12:41:21,044 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9776875000007
[2025-11-23 07:42:03] 2025-11-23 12:41:21,069 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6894267748/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 07:42:03] 2025-11-23 12:41:21,070 | INFO     | extracted standard info from prmon json
[2025-11-23 07:42:03] 2025-11-23 12:41:21,070 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 07:42:03] 2025-11-23 12:41:21,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 07:42:03] 2025-11-23 12:41:21,084 | INFO     | fitting pss+swap vs Time
[2025-11-23 07:42:03] 2025-11-23 12:41:21,089 | INFO     | sum of square deviations: 125658720939.23787
[2025-11-23 07:42:03] 2025-11-23 12:41:21,100 | INFO     | sum of deviations: 447451050242.5215
[2025-11-23 07:42:03] 2025-11-23 12:41:21,100 | INFO     | mean x: 1763879045.354054
[2025-11-23 07:42:03] 2025-11-23 12:41:21,100 | INFO     | mean y: 2767064.727027027
[2025-11-23 07:42:03] 2025-11-23 12:41:21,100 | INFO     | intersect: -6278130317.047918
[2025-11-23 07:42:03] 2025-11-23 12:41:21,101 | INFO     | chi2: 40.2425716750093
[2025-11-23 07:42:03] 2025-11-23 12:41:21,101 | INFO     | sum of square deviations: 123129287296.93321
[2025-11-23 07:42:03] 2025-11-23 12:41:21,119 | INFO     | sum of deviations: 684261578918.2
[2025-11-23 07:42:03] 2025-11-23 12:41:21,120 | INFO     | mean x: 1763878892.8666666
[2025-11-23 07:42:03] 2025-11-23 12:41:21,120 | INFO     | mean y: 2781335.910204082
[2025-11-23 07:42:03] 2025-11-23 12:41:21,120 | INFO     | intersect: -9799553939.066195
[2025-11-23 07:42:03] 2025-11-23 12:41:21,120 | INFO     | chi2: 36.59667871995852
[2025-11-23 07:42:03] 2025-11-23 12:41:21,120 | INFO     | current chi2=36.59667871995852 (change=9.059791169645573 %)
[2025-11-23 07:42:03] 2025-11-23 12:41:21,120 | INFO     | right removable region: 734
[2025-11-23 07:42:03] 2025-11-23 12:41:21,121 | INFO     | sum of square deviations: 123128450376.93327
[2025-11-23 07:42:03] 2025-11-23 12:41:21,131 | INFO     | sum of deviations: 138693736948.06717
[2025-11-23 07:42:03] 2025-11-23 12:41:21,131 | INFO     | mean x: 1763879197.8666666
[2025-11-23 07:42:03] 2025-11-23 12:41:21,131 | INFO     | mean y: 2785674.4802721087
[2025-11-23 07:42:03] 2025-11-23 12:41:21,132 | INFO     | intersect: -1984074362.5637538
[2025-11-23 07:42:03] 2025-11-23 12:41:21,136 | INFO     | chi2: 35.28976134569307
[2025-11-23 07:42:03] 2025-11-23 12:41:21,136 | INFO     | current chi2=35.28976134569307 (change=12.307390216793554 %)
[2025-11-23 07:42:03] 2025-11-23 12:41:21,136 | INFO     | left removable region: 10
[2025-11-23 07:42:03] 2025-11-23 12:41:21,137 | INFO     | sum of square deviations: 117682869135.02187
[2025-11-23 07:42:03] 2025-11-23 12:41:21,147 | INFO     | sum of deviations: 146658520610.51642
[2025-11-23 07:42:03] 2025-11-23 12:41:21,147 | INFO     | mean x: 1763879167.3950276
[2025-11-23 07:42:03] 2025-11-23 12:41:21,147 | INFO     | mean y: 2819852.4212707183
[2025-11-23 07:42:03] 2025-11-23 12:41:21,147 | INFO     | intersect: -2195358277.728344
[2025-11-23 07:42:03] 2025-11-23 12:41:21,152 | INFO     | chi2: 27.191814627854118
[2025-11-23 07:42:03] 2025-11-23 12:41:21,152 | INFO     | current memory leak: 1.25 B/s (using 724 data points, chi2=27.19)
[2025-11-23 07:42:03] 2025-11-23 12:41:21,152 | INFO     | could have reported an average CPU frequency of 3789 MHz (28 samples)
[2025-11-23 07:42:03] 2025-11-23 12:41:21,153 | INFO     | ..............................
[2025-11-23 07:42:03] 2025-11-23 12:41:21,153 | INFO     | . Timing measurements:
[2025-11-23 07:42:03] 2025-11-23 12:41:21,153 | INFO     | . get job = 0 s
[2025-11-23 07:42:03] 2025-11-23 12:41:21,153 | INFO     | . initial setup = 7 s
[2025-11-23 07:42:03] 2025-11-23 12:41:21,153 | INFO     | . payload setup = 57 s
[2025-11-23 07:42:03] 2025-11-23 12:41:21,153 | INFO     | . stage-in = 0 s
[2025-11-23 07:42:03] 2025-11-23 12:41:21,153 | INFO     | . payload execution = 45158 s
[2025-11-23 07:42:03] 2025-11-23 12:41:21,153 | INFO     | . stage-out = 12 s
[2025-11-23 07:42:03] 2025-11-23 12:41:21,153 | INFO     | . log creation = 4 s
[2025-11-23 07:42:03] 2025-11-23 12:41:21,153 | INFO     | ..............................
[2025-11-23 07:42:03] 2025-11-23 12:41:21,285 | INFO     | time since job start (45345s) is within the limit (172800.0s)
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | 
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | job summary report
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | --------------------------------------------------
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | PanDA job id: 6894267748
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | task id: 47533967
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | errors: (none)
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | pilot state: finished 
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | transexitcode: 0
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | exeerrorcode: 0
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | exeerrordiag: 
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | exitcode: 0
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | exitmsg: OK
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | cpuconsumptiontime: 138813 s
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | nevents: 1000
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | neventsw: 0
[2025-11-23 07:42:03] 2025-11-23 12:41:21,390 | INFO     | pid: 3753480
[2025-11-23 07:42:03] 2025-11-23 12:41:21,391 | INFO     | pgrp: 3753480
[2025-11-23 07:42:03] 2025-11-23 12:41:21,391 | INFO     | corecount: 8
[2025-11-23 07:42:03] 2025-11-23 12:41:21,391 | INFO     | event service: False
[2025-11-23 07:42:03] 2025-11-23 12:41:21,391 | INFO     | sizes: {0: 2298807, 11: 2298807, 22: 2298835, 33: 2298863, 35: 2299181, 43: 2299209, 45216: 2345185, 45217: 2345184, 45230: 2354234, 45234: 2354290, 45266: 2354536
[2025-11-23 07:42:03] 2025-11-23 12:41:21,391 | INFO     | --------------------------------------------------
[2025-11-23 07:42:03] 2025-11-23 12:41:21,391 | INFO     | 
[2025-11-23 07:42:03] 2025-11-23 12:41:21,391 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-23 07:42:03] 2025-11-23 12:41:21,522 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,522 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,522 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,524 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,525 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 07:42:03] 2025-11-23 12:41:21,525 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,525 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 07:42:03] 2025-11-23 12:41:21,525 | INFO     | job 6894267748 has completed (purged errors)
[2025-11-23 07:42:03] 2025-11-23 12:41:21,531 | INFO     | overall cleanup function is called
[2025-11-23 07:42:03] 2025-11-23 12:41:22,615 | INFO     | --- collectZombieJob: --- 10, [3753480]
[2025-11-23 07:42:03] 2025-11-23 12:41:22,615 | INFO     | zombie collector waiting for pid 3753480
[2025-11-23 07:42:03] 2025-11-23 12:41:22,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 07:42:03] 2025-11-23 12:41:22,615 | INFO     | collected zombie processes
[2025-11-23 07:42:03] 2025-11-23 12:41:22,615 | INFO     | will attempt to kill all subprocesses of pid=3753480
[2025-11-23 07:42:03] 2025-11-23 12:41:23,614 | INFO     | process IDs to be killed: [3753480] (in reverse order)
[2025-11-23 07:42:03] 2025-11-23 12:41:23,953 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 07:42:03] 2025-11-23 12:41:23,953 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 07:42:03] 2025-11-23 12:41:24,064 | INFO     | did not find any defunct processes belonging to 3753480
[2025-11-23 07:42:03] 2025-11-23 12:41:24,097 | INFO     | did not find any defunct processes belonging to 3753480
[2025-11-23 07:42:03] 2025-11-23 12:41:24,114 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 07:42:03] 2025-11-23 12:41:24,114 | INFO     | ready for new job
[2025-11-23 07:42:03] 2025-11-23 12:41:24,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 07:42:03] 2025-11-23 12:41:24,116 | INFO     | ***************************************
[2025-11-23 07:42:03] 2025-11-23 12:41:24,116 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 07:42:03] 2025-11-23 12:41:24,117 | INFO     | ***************************************
[2025-11-23 07:42:03] 2025-11-23 12:41:24,117 | INFO     | 
[2025-11-23 07:42:03] 2025-11-23 12:41:24,132 | INFO     | architecture information:
[2025-11-23 07:42:03] 2025-11-23 12:41:24,136 | INFO     | executing command: cat /etc/os-release
[2025-11-23 07:42:03] 2025-11-23 12:41:24,247 | INFO     | cat /etc/os-release:
[2025-11-23 07:42:03] NAME="CentOS Linux"
[2025-11-23 07:42:03] VERSION="7 (Core)"
[2025-11-23 07:42:03] ID="centos"
[2025-11-23 07:42:03] ID_LIKE="rhel fedora"
[2025-11-23 07:42:03] VERSION_ID="7"
[2025-11-23 07:42:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 07:42:03] ANSI_COLOR="0;31"
[2025-11-23 07:42:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 07:42:03] HOME_URL="https://www.centos.org/"
[2025-11-23 07:42:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 07:42:03] 
[2025-11-23 07:42:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 07:42:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 07:42:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 07:42:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 07:42:03] 
[2025-11-23 07:42:03] 2025-11-23 12:41:24,247 | INFO     | ***************************************
[2025-11-23 07:42:03] 2025-11-23 12:41:24,750 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-23 07:42:03] 2025-11-23 12:41:24,829 | INFO     | sufficient remaining disk space (155041398784 B)
[2025-11-23 07:42:03] 2025-11-23 12:41:24,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 07:42:03] 2025-11-23 12:41:24,829 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 07:42:03] 2025-11-23 12:41:24,830 | INFO     | update_server=False
[2025-11-23 07:42:03] 2025-11-23 12:41:24,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 07:42:03] 2025-11-23 12:41:25,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:42:03] 2025-11-23 12:41:25,193 | INFO     | aborting loop
[2025-11-23 07:42:03] 2025-11-23 12:41:25,304 | INFO     | all job control threads have been joined
[2025-11-23 07:42:03] 2025-11-23 12:41:25,450 | INFO     | all payload control threads have been joined
[2025-11-23 07:42:03] 2025-11-23 12:41:25,601 | INFO     | all data control threads have been joined
[2025-11-23 07:42:03] 2025-11-23 12:41:25,836 | INFO     | [job] retrieve thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:25,852 | INFO     | [job] validate thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:26,053 | INFO     | [payload] failed_post thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:26,112 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:26,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 07:42:03] 2025-11-23 12:41:26,199 | INFO     | [job] job monitor thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:26,310 | INFO     | [job] control thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:26,319 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:42:03] 2025-11-23 12:41:26,407 | INFO     | [data] copytool_in thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:26,408 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:26,458 | INFO     | [payload] control thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:26,605 | INFO     | [payload] validate_post thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:26,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 07:42:03] 2025-11-23 12:41:26,622 | INFO     | [data] control thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:26,930 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:27,141 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:27,325 | INFO     | [job] queue monitor thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:28,152 | INFO     | [data] copytool_out thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:30,623 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 07:42:03] 2025-11-23 12:41:55,477 | INFO     | [monitor] cgroup control has ended
[2025-11-23 07:42:03] 2025-11-23 12:41:55,930 | INFO     | PID=3733484 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 07:42:03] 2025-11-23 12:41:55,930 | INFO     | .. there are 37 such processes running
[2025-11-23 07:42:03] 2025-11-23 12:41:55,930 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 07:42:03] 2025-11-23 12:41:55,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 07:42:03] 2025-11-23 12:41:55,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 07:42:03] 2025-11-23 12:41:56,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008709764928)>', '<ExcThread(monitor, started 140008428111616)>']
[2025-11-23 07:42:03] 2025-11-23 12:41:56,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 07:42:03] 2025-11-23 12:41:56,938 | INFO     | [monitor] control thread has ended
[2025-11-23 07:42:03] 2025-11-23 12:42:01,519 | INFO     | all workflow threads have been joined
[2025-11-23 07:42:03] 2025-11-23 12:42:01,519 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 07:42:03] 2025-11-23 12:42:01,519 | INFO     | traces error code: 0
[2025-11-23 07:42:03] 2025-11-23 12:42:01,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 07:42:03] 2025-11-23 12:42:02,030 [wrapper] ==== pilot stdout END ====
[2025-11-23 07:42:03] 2025-11-23 12:42:02,069 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 07:42:03] 2025-11-23 12:42:02,112 [wrapper] pilotpid: 3733484
[2025-11-23 07:42:03] 2025-11-23 12:42:02,146 [wrapper] Pilot exit status: 0
[2025-11-23 07:42:03] 2025-11-23 12:42:02,331 [wrapper] pandaids: 6894267748
[2025-11-23 07:42:03] 2025-11-23 12:42:02,600 [wrapper] cleanup supervisor_pilot 2613070 3733485
[2025-11-23 07:42:03] 2025-11-23 12:42:02,637 [wrapper] Test setup, not cleaning
[2025-11-23 07:42:03] 2025-11-23 12:42:02,673 [wrapper] apfmon messages muted
[2025-11-23 07:42:03] 2025-11-23 12:42:02,699 [wrapper] ==== wrapper stdout END ====
[2025-11-23 07:42:03] 2025-11-23 12:42:02,716 [wrapper] ==== wrapper stderr END ====
[2025-11-23 07:42:03]  *** Error codes and diagnostics ***
[2025-11-23 07:42:03]     "exeErrorCode": 0,
[2025-11-23 07:42:03]     "exeErrorDiag": "",
[2025-11-23 07:42:03]     "pilotErrorCode": 0,
[2025-11-23 07:42:03]     "pilotErrorDiag": "",
[2025-11-23 07:42:03]  *** Listing of results directory ***
[2025-11-23 07:42:03] total 1298084
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 00:09 pilot3.tar.gz
[2025-11-23 07:42:03] -rwx------. 1 boincer umatlas     36292 Nov 21 00:29 runpilot2-wrapper.sh
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 00:29 queuedata.json
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas       100 Nov 22 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 07:42:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 19:04 run_atlas
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas       105 Nov 22 19:04 job.xml
[2025-11-23 07:42:03] -rw-r--r--. 2 boincer umatlas 408220765 Nov 22 19:04 EVNT.47493127._002251.pool.root.1
[2025-11-23 07:42:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 19:04 shared
[2025-11-23 07:42:03] -rw-r--r--. 2 boincer umatlas    590100 Nov 22 19:04 input.tar.gz
[2025-11-23 07:42:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 19:04 start_atlas.sh
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas         0 Nov 22 19:04 boinc_lockfile
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas      2786 Nov 22 19:04 pandaJob.out
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas        57 Nov 22 19:04 setup.sh.local
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas    989784 Nov 22 19:05 agis_schedconf.cvmfs.json
[2025-11-23 07:42:03] drwx------. 5 boincer umatlas      4096 Nov 22 19:05 pilot3
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas       533 Nov 23 06:59 boinc_task_state.xml
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas      7173 Nov 23 07:37 init_data.xml
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas 901784353 Nov 23 07:39 HITS.47533967._002227.pool.root.1
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas      1076 Nov 23 07:40 memory_monitor_summary.json
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas   1526164 Nov 23 07:40 agis_ddmendpoints.agis.ALL.json
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas   1941950 Nov 23 07:40 log.47533967._002227.job.log.tgz.1
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas        95 Nov 23 07:41 pilot_heartbeat.json
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas      8641 Nov 23 07:41 heartbeat.json
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas      4825 Nov 23 07:42 pilotlog.txt
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 07:42 boinc_mmap_file
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas   5705918 Nov 23 07:42 log.47533967._002227.job.log.1
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas        29 Nov 23 07:42 wrapper_checkpoint.txt
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas       353 Nov 23 07:42 output.list
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas       620 Nov 23 07:42 runtime_log
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas   7669760 Nov 23 07:42 result.tar.gz
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas       666 Nov 23 07:42 y6TKDmctYg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJNHKDmSbuCCn.diag
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas      9343 Nov 23 07:42 runtime_log.err
[2025-11-23 07:42:03] -rw-r--r--. 1 boincer umatlas     21895 Nov 23 07:42 stderr.txt
[2025-11-23 07:42:03] HITS file was successfully produced:
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas 901784353 Nov 23 07:39 shared/HITS.pool.root.1
[2025-11-23 07:42:03]  *** Contents of shared directory: ***
[2025-11-23 07:42:03] total 1287404
[2025-11-23 07:42:03] -rw-r--r--. 2 boincer umatlas 408220765 Nov 22 19:04 ATLAS.root_0
[2025-11-23 07:42:03] -rw-r--r--. 2 boincer umatlas    590100 Nov 22 19:04 input.tar.gz
[2025-11-23 07:42:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 19:04 start_atlas.sh
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas 901784353 Nov 23 07:39 HITS.pool.root.1
[2025-11-23 07:42:03] -rw-------. 1 boincer umatlas   7669760 Nov 23 07:42 result.tar.gz
07:42:04 (3724070): run_atlas exited; CPU time 139185.733424
07:42:04 (3724070): called boinc_finish(0)

</stderr_txt>
]]>

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