Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:43:33 (14635): wrapper (7.7.26015): starting
05:43:33 (14635): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 05:43:33] Arguments: --nthreads 8
[2025-11-25 05:43:33] Threads: 8
[2025-11-25 05:43:33] Checking for CVMFS
[2025-11-25 05:43:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:43:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:43:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:43:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:43:34] 2.11.2.0 31392 283316 136116 153270 2 85 15716429 25165824 4632 130560 12 139595425 99.876 78951117 2856 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 05:43:34] CVMFS is ok
[2025-11-25 05:43:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:43:34] Checking for apptainer binary...
[2025-11-25 05:43:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:43:34] Running /usr/bin/apptainer --version
[2025-11-25 05:43:34] apptainer version 1.3.2-1.el7
[2025-11-25 05:43:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:43:51] cg-vwn267.simple-grid.lan
[2025-11-25 05:43:51] apptainer works
[2025-11-25 05:43:52] Set ATHENA_PROC_NUMBER=8
[2025-11-25 05:43:52] Set ATHENA_CORE_NUMBER=8
[2025-11-25 05:43:52] Starting ATLAS job with PandaID=6893876613
[2025-11-25 05:43:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:18:58]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:18:58] 2025-11-26 06:17:50,238 | INFO     | monitor loop #6175: job 0:6893876613 is in state 'finished'
[2025-11-26 07:18:58] 2025-11-26 06:17:50,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:18:58] 2025-11-26 06:17:50,679 | INFO     | time since job start (91780s) is within the limit (172800.0s)
[2025-11-26 07:18:58] 2025-11-26 06:17:52,691 | INFO     | time since job start (91782s) is within the limit (172800.0s)
[2025-11-26 07:18:58] 2025-11-26 06:17:52,742 | INFO     | monitor loop #6176: job 0:6893876613 is in state 'finished'
[2025-11-26 07:18:58] 2025-11-26 06:17:52,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:18:58] 2025-11-26 06:17:54,700 | INFO     | time since job start (91784s) is within the limit (172800.0s)
[2025-11-26 07:18:58] 2025-11-26 06:17:55,249 | INFO     | monitor loop #6177: job 0:6893876613 is in state 'finished'
[2025-11-26 07:18:58] 2025-11-26 06:17:55,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:18:58] 2025-11-26 06:17:56,706 | INFO     | time since job start (91786s) is within the limit (172800.0s)
[2025-11-26 07:18:58] 2025-11-26 06:17:57,758 | INFO     | monitor loop #6178: job 0:6893876613 is in state 'finished'
[2025-11-26 07:18:58] 2025-11-26 06:17:57,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:18:58] 2025-11-26 06:17:58,500 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 07:18:58] 2025-11-26 06:17:58,501 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 07:18:58] 2025-11-26 06:17:58,503 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6893876613/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:18:58] 2025-11-26 06:17:58,504 | INFO     | extracted standard info from prmon json
[2025-11-26 07:18:58] 2025-11-26 06:17:58,504 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:18:58] 2025-11-26 06:17:58,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:18:58] 2025-11-26 06:17:58,532 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:18:58] 2025-11-26 06:17:58,534 | INFO     | sum of square deviations: 1034019565229.4757
[2025-11-26 07:18:58] 2025-11-26 06:17:58,605 | INFO     | sum of deviations: 4156689570542.965
[2025-11-26 07:18:58] 2025-11-26 06:17:58,605 | INFO     | mean x: 1764092167.8293173
[2025-11-26 07:18:58] 2025-11-26 06:17:58,606 | INFO     | mean y: 2837333.6586345383
[2025-11-26 07:18:58] 2025-11-26 06:17:58,606 | INFO     | intersect: -7088695324.00952
[2025-11-26 07:18:58] 2025-11-26 06:17:58,608 | INFO     | chi2: 23.796703393611974
[2025-11-26 07:18:58] 2025-11-26 06:17:58,610 | INFO     | sum of square deviations: 1023673121133.1101
[2025-11-26 07:18:58] 2025-11-26 06:17:58,709 | INFO     | sum of deviations: 4656473217538.3125
[2025-11-26 07:18:58] 2025-11-26 06:17:58,710 | INFO     | mean x: 1764092015.333781
[2025-11-26 07:18:58] 2025-11-26 06:17:58,710 | INFO     | mean y: 2844699.027535259
[2025-11-26 07:18:58] 2025-11-26 06:17:58,710 | INFO     | intersect: -8021637973.314506
[2025-11-26 07:18:58] 2025-11-26 06:17:58,712 | INFO     | chi2: 20.534004401801322
[2025-11-26 07:18:58] 2025-11-26 06:17:58,712 | INFO     | current chi2=20.534004401801322 (change=13.710718404325265 %)
[2025-11-26 07:18:58] 2025-11-26 06:17:58,712 | INFO     | right removable region: 1488
[2025-11-26 07:18:58] 2025-11-26 06:17:58,714 | INFO     | sum of square deviations: 1023671909673.1115
[2025-11-26 07:18:58] 2025-11-26 06:17:58,744 | INFO     | time since job start (91788s) is within the limit (172800.0s)
[2025-11-26 07:18:58] 2025-11-26 06:17:58,809 | INFO     | sum of deviations: 3546268751780.8066
[2025-11-26 07:18:58] 2025-11-26 06:17:58,809 | INFO     | mean x: 1764092320.333781
[2025-11-26 07:18:58] 2025-11-26 06:17:58,809 | INFO     | mean y: 2846329.2921423772
[2025-11-26 07:18:58] 2025-11-26 06:17:58,809 | INFO     | intersect: -6108433477.979205
[2025-11-26 07:18:58] 2025-11-26 06:17:58,811 | INFO     | chi2: 19.294561456361677
[2025-11-26 07:18:58] 2025-11-26 06:17:58,811 | INFO     | current chi2=19.294561456361677 (change=18.919183311999674 %)
[2025-11-26 07:18:58] 2025-11-26 06:17:58,812 | INFO     | left removable region: 10
[2025-11-26 07:18:58] 2025-11-26 06:17:58,814 | INFO     | sum of square deviations: 1001151978788.8966
[2025-11-26 07:18:58] 2025-11-26 06:17:58,903 | INFO     | sum of deviations: 3663214672747.891
[2025-11-26 07:18:58] 2025-11-26 06:17:58,903 | INFO     | mean x: 1764092289.8437078
[2025-11-26 07:18:58] 2025-11-26 06:17:58,903 | INFO     | mean y: 2863142.8437077133
[2025-11-26 07:18:58] 2025-11-26 06:17:58,903 | INFO     | intersect: -6451949809.785464
[2025-11-26 07:18:58] 2025-11-26 06:17:58,905 | INFO     | chi2: 12.059152574125655
[2025-11-26 07:18:58] 2025-11-26 06:17:58,905 | INFO     | current memory leak: 3.66 B/s (using 1478 data points, chi2=12.06)
[2025-11-26 07:18:58] 2025-11-26 06:17:58,907 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-26 07:18:58] 2025-11-26 06:17:58,907 | INFO     | ..............................
[2025-11-26 07:18:58] 2025-11-26 06:17:58,907 | INFO     | . Timing measurements:
[2025-11-26 07:18:58] 2025-11-26 06:17:58,907 | INFO     | . get job = 0 s
[2025-11-26 07:18:58] 2025-11-26 06:17:58,907 | INFO     | . initial setup = 13 s
[2025-11-26 07:18:58] 2025-11-26 06:17:58,907 | INFO     | . payload setup = 181 s
[2025-11-26 07:18:58] 2025-11-26 06:17:58,907 | INFO     | . stage-in = 0 s
[2025-11-26 07:18:58] 2025-11-26 06:17:58,908 | INFO     | . payload execution = 91283 s
[2025-11-26 07:18:58] 2025-11-26 06:17:58,908 | INFO     | . stage-out = 13 s
[2025-11-26 07:18:58] 2025-11-26 06:17:58,908 | INFO     | . log creation = 2 s
[2025-11-26 07:18:58] 2025-11-26 06:17:58,908 | INFO     | ..............................
[2025-11-26 07:18:58] 2025-11-26 06:17:59,345 | INFO     | 
[2025-11-26 07:18:58] 2025-11-26 06:17:59,345 | INFO     | job summary report
[2025-11-26 07:18:58] 2025-11-26 06:17:59,345 | INFO     | --------------------------------------------------
[2025-11-26 07:18:58] 2025-11-26 06:17:59,345 | INFO     | PanDA job id: 6893876613
[2025-11-26 07:18:58] 2025-11-26 06:17:59,346 | INFO     | task id: 47523449
[2025-11-26 07:18:58] 2025-11-26 06:17:59,346 | INFO     | errors: (none)
[2025-11-26 07:18:58] 2025-11-26 06:17:59,346 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:18:58] 2025-11-26 06:17:59,346 | INFO     | pilot state: finished 
[2025-11-26 07:18:58] 2025-11-26 06:17:59,346 | INFO     | transexitcode: 0
[2025-11-26 07:18:58] 2025-11-26 06:17:59,346 | INFO     | exeerrorcode: 0
[2025-11-26 07:18:58] 2025-11-26 06:17:59,346 | INFO     | exeerrordiag: 
[2025-11-26 07:18:58] 2025-11-26 06:17:59,346 | INFO     | exitcode: 0
[2025-11-26 07:18:58] 2025-11-26 06:17:59,346 | INFO     | exitmsg: OK
[2025-11-26 07:18:58] 2025-11-26 06:17:59,347 | INFO     | cpuconsumptiontime: 340405 s
[2025-11-26 07:18:58] 2025-11-26 06:17:59,347 | INFO     | nevents: 1000
[2025-11-26 07:18:58] 2025-11-26 06:17:59,347 | INFO     | neventsw: 0
[2025-11-26 07:18:58] 2025-11-26 06:17:59,347 | INFO     | pid: 24935
[2025-11-26 07:18:58] 2025-11-26 06:17:59,347 | INFO     | pgrp: 24935
[2025-11-26 07:18:58] 2025-11-26 06:17:59,347 | INFO     | corecount: 8
[2025-11-26 07:18:58] 2025-11-26 06:17:59,347 | INFO     | event service: False
[2025-11-26 07:18:58] 2025-11-26 06:17:59,347 | INFO     | sizes: {0: 2283430, 1: 2284031, 2: 2284314, 3: 2284314, 13: 2284342, 24: 2284398, 35: 2284554, 46: 2284582, 56: 2284610, 67: 2284638, 78: 2284666, 89: 2285002, 99:
[2025-11-26 07:18:58] 2025-11-26 06:17:59,347 | INFO     | --------------------------------------------------
[2025-11-26 07:18:58] 2025-11-26 06:17:59,348 | INFO     | 
[2025-11-26 07:18:58] 2025-11-26 06:17:59,348 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-26 07:18:58] 2025-11-26 06:17:59,892 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,893 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,893 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,893 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,893 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,893 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,893 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,893 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,894 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,894 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,894 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,894 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,894 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,894 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,894 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,894 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,895 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:18:58] 2025-11-26 06:17:59,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,895 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:18:58] 2025-11-26 06:17:59,895 | INFO     | job 6893876613 has completed (purged errors)
[2025-11-26 07:18:58] 2025-11-26 06:17:59,895 | INFO     | overall cleanup function is called
[2025-11-26 07:18:58] 2025-11-26 06:18:00,920 | INFO     | --- collectZombieJob: --- 10, [24935]
[2025-11-26 07:18:58] 2025-11-26 06:18:00,920 | INFO     | zombie collector waiting for pid 24935
[2025-11-26 07:18:58] 2025-11-26 06:18:00,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:18:58] 2025-11-26 06:18:00,920 | INFO     | collected zombie processes
[2025-11-26 07:18:58] 2025-11-26 06:18:00,920 | INFO     | will attempt to kill all subprocesses of pid=24935
[2025-11-26 07:18:58] 2025-11-26 06:18:01,067 | INFO     | process IDs to be killed: [24935] (in reverse order)
[2025-11-26 07:18:58] 2025-11-26 06:18:01,675 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:18:58] 2025-11-26 06:18:01,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:18:58] 2025-11-26 06:18:01,678 | INFO     | did not find any defunct processes belonging to 24935
[2025-11-26 07:18:58] 2025-11-26 06:18:01,681 | INFO     | did not find any defunct processes belonging to 24935
[2025-11-26 07:18:58] 2025-11-26 06:18:01,705 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:18:58] 2025-11-26 06:18:01,706 | INFO     | ready for new job
[2025-11-26 07:18:58] 2025-11-26 06:18:01,706 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:18:58] 2025-11-26 06:18:01,711 | INFO     | ***************************************
[2025-11-26 07:18:58] 2025-11-26 06:18:01,712 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:18:58] 2025-11-26 06:18:01,712 | INFO     | ***************************************
[2025-11-26 07:18:58] 2025-11-26 06:18:01,712 | INFO     | 
[2025-11-26 07:18:58] 2025-11-26 06:18:01,712 | INFO     | pilot is running in a VM
[2025-11-26 07:18:58] 2025-11-26 06:18:01,712 | INFO     | architecture information:
[2025-11-26 07:18:58] 2025-11-26 06:18:01,725 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:18:58] 2025-11-26 06:18:02,017 | INFO     | cat /etc/os-release:
[2025-11-26 07:18:58] NAME="CentOS Linux"
[2025-11-26 07:18:58] VERSION="7 (Core)"
[2025-11-26 07:18:58] ID="centos"
[2025-11-26 07:18:58] ID_LIKE="rhel fedora"
[2025-11-26 07:18:58] VERSION_ID="7"
[2025-11-26 07:18:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:18:58] ANSI_COLOR="0;31"
[2025-11-26 07:18:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:18:58] HOME_URL="https://www.centos.org/"
[2025-11-26 07:18:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:18:58] 
[2025-11-26 07:18:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:18:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:18:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:18:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:18:58] 
[2025-11-26 07:18:58] 2025-11-26 06:18:02,018 | INFO     | ***************************************
[2025-11-26 07:18:58] 2025-11-26 06:18:02,521 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-26 07:18:58] 2025-11-26 06:18:02,774 | INFO     | sufficient remaining disk space (496148414464 B)
[2025-11-26 07:18:58] 2025-11-26 06:18:02,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:18:58] 2025-11-26 06:18:02,774 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:18:58] 2025-11-26 06:18:02,774 | INFO     | update_server=False
[2025-11-26 07:18:58] 2025-11-26 06:18:02,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:18:58] 2025-11-26 06:18:02,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:18:58] 2025-11-26 06:18:02,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:18:58] 2025-11-26 06:18:02,791 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 07:18:58] 2025-11-26 06:18:02,791 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 07:18:58] 2025-11-26 06:18:02,791 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:18:58] 2025-11-26 06:18:02,792 | INFO     | will abort loop
[2025-11-26 07:18:58] 2025-11-26 06:18:02,832 | INFO     | all data control threads have been joined
[2025-11-26 07:18:58] 2025-11-26 06:18:03,096 | INFO     | all payload control threads have been joined
[2025-11-26 07:18:58] 2025-11-26 06:18:03,543 | INFO     | all job control threads have been joined
[2025-11-26 07:18:58] 2025-11-26 06:18:03,781 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:03,798 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:03,822 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:03,838 | INFO     | [data] control thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:03,861 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:04,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:18:58] 2025-11-26 06:18:04,061 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:04,102 | INFO     | [payload] control thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:04,150 | INFO     | [job] validate thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:04,346 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:04,548 | INFO     | [job] control thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:04,591 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:04,632 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:04,785 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:04,811 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:05,066 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:06,787 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:18:58] 2025-11-26 06:18:31,931 | INFO     | PID=18389 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 07:18:58] 2025-11-26 06:18:31,931 | INFO     | .. there are 9 such processes running
[2025-11-26 07:18:58] 2025-11-26 06:18:31,933 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:18:58] 2025-11-26 06:18:31,933 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:18:58] 2025-11-26 06:18:31,933 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:18:58] 2025-11-26 06:18:49,381 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:18:58] 2025-11-26 06:18:50,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139965100275520)>', '<ExcThread(monitor, started 139963907692288)>']
[2025-11-26 07:18:58] 2025-11-26 06:18:51,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:18:58] 2025-11-26 06:18:51,046 | INFO     | [monitor] control thread has ended
[2025-11-26 07:18:58] 2025-11-26 06:18:54,679 [wrapper] supervise_pilot (15 min periods counter: 103)
[2025-11-26 07:18:58] 2025-11-26 06:18:55,405 | INFO     | all workflow threads have been joined
[2025-11-26 07:18:58] 2025-11-26 06:18:55,405 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:18:58] 2025-11-26 06:18:55,405 | INFO     | traces error code: 0
[2025-11-26 07:18:58] 2025-11-26 06:18:55,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:18:58] 2025-11-26 06:18:55,631 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:18:58] 2025-11-26 06:18:55,698 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:18:58] 2025-11-26 06:18:55,799 [wrapper] pilotpid: 18389
[2025-11-26 07:18:58] 2025-11-26 06:18:55,898 [wrapper] Pilot exit status: 0
[2025-11-26 07:18:58] 2025-11-26 06:18:56,258 [wrapper] pandaids: 6893876613
[2025-11-26 07:18:58] 2025-11-26 06:18:56,825 [wrapper] cleanup supervisor_pilot 32318 18390
[2025-11-26 07:18:58] 2025-11-26 06:18:56,893 [wrapper] Test setup, not cleaning
[2025-11-26 07:18:58] 2025-11-26 06:18:56,942 [wrapper] apfmon messages muted
[2025-11-26 07:18:58] 2025-11-26 06:18:56,974 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:18:58] 2025-11-26 06:18:56,979 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:18:58]  *** Error codes and diagnostics ***
[2025-11-26 07:18:58]     "exeErrorCode": 0,
[2025-11-26 07:18:58]     "exeErrorDiag": "",
[2025-11-26 07:18:58]     "pilotErrorCode": 0,
[2025-11-26 07:18:58]     "pilotErrorDiag": "",
[2025-11-26 07:18:58]  *** Listing of results directory ***
[2025-11-26 07:18:58] total 1322636
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc    576529 Nov 20 18:21 pilot3.tar.gz
[2025-11-26 07:18:58] -rwx------. 1 boinc boinc     36292 Nov 20 18:30 runpilot2-wrapper.sh
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc      5112 Nov 20 18:30 queuedata.json
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc       100 Nov 25 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:18:58] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 05:43 run_atlas
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc       105 Nov 25 05:43 job.xml
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc      6391 Nov 25 05:43 init_data.xml
[2025-11-26 07:18:58] -rw-r--r--. 2 boinc boinc 409164414 Nov 25 05:43 EVNT.47493127._000763.pool.root.1
[2025-11-26 07:18:58] -rw-r--r--. 2 boinc boinc     15847 Nov 25 05:43 start_atlas.sh
[2025-11-26 07:18:58] drwxrwx--x. 2 boinc boinc        68 Nov 25 05:43 shared
[2025-11-26 07:18:58] -rw-r--r--. 2 boinc boinc    590093 Nov 25 05:43 input.tar.gz
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc         0 Nov 25 05:43 boinc_lockfile
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc      2784 Nov 25 05:43 pandaJob.out
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc    991801 Nov 25 05:47 agis_schedconf.cvmfs.json
[2025-11-26 07:18:58] drwx------. 5 boinc boinc      4096 Nov 25 05:48 pilot3
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc       533 Nov 26 06:50 boinc_task_state.xml
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc 911615463 Nov 26 07:14 HITS.47523449._007628.pool.root.1
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc      1031 Nov 26 07:16 memory_monitor_summary.json
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc   1516240 Nov 26 07:16 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc   2582332 Nov 26 07:16 log.47523449._007628.job.log.tgz.1
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc      7948 Nov 26 07:17 heartbeat.json
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc        95 Nov 26 07:18 pilot_heartbeat.json
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc      8192 Nov 26 07:18 boinc_mmap_file
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc        29 Nov 26 07:18 wrapper_checkpoint.txt
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc      5070 Nov 26 07:18 pilotlog.txt
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc  12265829 Nov 26 07:18 log.47523449._007628.job.log.1
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc       353 Nov 26 07:18 output.list
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc       620 Nov 26 07:18 runtime_log
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc  14868480 Nov 26 07:18 result.tar.gz
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc      8817 Nov 26 07:18 runtime_log.err
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc       662 Nov 26 07:18 8JdKDmdfNg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVMIKDmyTcqYm.diag
[2025-11-26 07:18:58] -rw-r--r--. 1 boinc boinc     21403 Nov 26 07:18 stderr.txt
[2025-11-26 07:18:58] HITS file was successfully produced:
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc 911615463 Nov 26 07:14 shared/HITS.pool.root.1
[2025-11-26 07:18:58]  *** Contents of shared directory: ***
[2025-11-26 07:18:58] total 1304944
[2025-11-26 07:18:58] -rw-r--r--. 2 boinc boinc 409164414 Nov 25 05:43 ATLAS.root_0
[2025-11-26 07:18:58] -rw-r--r--. 2 boinc boinc     15847 Nov 25 05:43 start_atlas.sh
[2025-11-26 07:18:58] -rw-r--r--. 2 boinc boinc    590093 Nov 25 05:43 input.tar.gz
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc 911615463 Nov 26 07:14 HITS.pool.root.1
[2025-11-26 07:18:58] -rw-------. 1 boinc boinc  14868480 Nov 26 07:18 result.tar.gz
07:19:00 (14635): run_atlas exited; CPU time 340959.159383
07:19:00 (14635): called boinc_finish(0)

</stderr_txt>
]]>

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