Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
15:12:59 (1268961): wrapper (7.7.26015): starting
15:12:59 (1268961): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 15:12:59] Arguments: --nthreads 4
[2025-11-22 15:12:59] Threads: 4
[2025-11-22 15:12:59] Checking for CVMFS
[2025-11-22 15:12:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 15:12:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 15:12:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 15:12:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 15:12:59] 2.13.2.0 489841 514 65980 153183 2 90 2619745 4096000 4779 130560 0 2107965 99.759 308339 1374 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-22 15:12:59] CVMFS is ok
[2025-11-22 15:12:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 15:12:59] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-22 15:12:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-22 15:12:59] Further information can be found at the LHC@home message board.
[2025-11-22 15:12:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 15:12:59] Checking for apptainer binary...
[2025-11-22 15:12:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 15:12:59] Running /usr/bin/apptainer --version
[2025-11-22 15:12:59] apptainer version 1.4.3
[2025-11-22 15:12:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 15:12:59] SETI64-Ubuntu
[2025-11-22 15:12:59] apptainer works
[2025-11-22 15:12:59] Set ATHENA_PROC_NUMBER=4
[2025-11-22 15:12:59] Set ATHENA_CORE_NUMBER=4
[2025-11-22 15:12:59] Starting ATLAS job with PandaID=6895324653
[2025-11-22 15:12:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 00:01:59]  *** The last 200 lines of the pilot log: ***
[2025-11-23 00:01:59] 2025-11-23 05:01:20,872 | INFO     | time since job start (31691s) is within the limit (172800.0s)
[2025-11-23 00:01:59] 2025-11-23 05:01:21,808 | INFO     | monitor loop #2284: job 0:6895324653 is in state 'finished'
[2025-11-23 00:01:59] 2025-11-23 05:01:21,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 00:01:59] 2025-11-23 05:01:22,465 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 00:01:59] 2025-11-23 05:01:22,476 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2335.9648515625
[2025-11-23 00:01:59] 2025-11-23 05:01:22,489 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/14/PanDA_Pilot-6895324653/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 00:01:59] 2025-11-23 05:01:22,489 | INFO     | extracted standard info from prmon json
[2025-11-23 00:01:59] 2025-11-23 05:01:22,489 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 00:01:59] 2025-11-23 05:01:22,489 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 00:01:59] 2025-11-23 05:01:22,494 | INFO     | fitting pss+swap vs Time
[2025-11-23 00:01:59] 2025-11-23 05:01:22,494 | INFO     | sum of square deviations: 43348980220.0
[2025-11-23 00:01:59] 2025-11-23 05:01:22,498 | INFO     | sum of deviations: 270155017274.99997
[2025-11-23 00:01:59] 2025-11-23 05:01:22,498 | INFO     | mean x: 1763858212.0
[2025-11-23 00:01:59] 2025-11-23 05:01:22,499 | INFO     | mean y: 2248257.1714836224
[2025-11-23 00:01:59] 2025-11-23 05:01:22,499 | INFO     | intersect: -10990285899.691101
[2025-11-23 00:01:59] 2025-11-23 05:01:22,499 | INFO     | chi2: 3.265110801987281
[2025-11-23 00:01:59] 2025-11-23 05:01:22,499 | INFO     | sum of square deviations: 42108147652.5
[2025-11-23 00:01:59] 2025-11-23 05:01:22,503 | INFO     | sum of deviations: 327559475517.5
[2025-11-23 00:01:59] 2025-11-23 05:01:22,503 | INFO     | mean x: 1763858059.5
[2025-11-23 00:01:59] 2025-11-23 05:01:22,503 | INFO     | mean y: 2255280.643968872
[2025-11-23 00:01:59] 2025-11-23 05:01:22,503 | INFO     | intersect: -13718804729.52802
[2025-11-23 00:01:59] 2025-11-23 05:01:22,504 | INFO     | chi2: 2.225343541228488
[2025-11-23 00:01:59] 2025-11-23 05:01:22,504 | INFO     | current chi2=2.225343541228488 (change=31.844777216318292 %)
[2025-11-23 00:01:59] 2025-11-23 05:01:22,504 | INFO     | sum of square deviations: 40891222510.0
[2025-11-23 00:01:59] 2025-11-23 05:01:22,508 | INFO     | sum of deviations: 321076676758.0
[2025-11-23 00:01:59] 2025-11-23 05:01:22,508 | INFO     | mean x: 1763857907.0
[2025-11-23 00:01:59] 2025-11-23 05:01:22,508 | INFO     | mean y: 2254468.0451866407
[2025-11-23 00:01:59] 2025-11-23 05:01:22,508 | INFO     | intersect: -13847505952.161957
[2025-11-23 00:01:59] 2025-11-23 05:01:22,508 | INFO     | chi2: 2.225127997423203
[2025-11-23 00:01:59] 2025-11-23 05:01:22,508 | INFO     | current chi2=2.225127997423203 (change=0.009685866532125071 %)
[2025-11-23 00:01:59] 2025-11-23 05:01:22,508 | INFO     | right removable region: 508
[2025-11-23 00:01:59] 2025-11-23 05:01:22,509 | INFO     | sum of square deviations: 42108147652.5
[2025-11-23 00:01:59] 2025-11-23 05:01:22,513 | INFO     | sum of deviations: 163707161407.49985
[2025-11-23 00:01:59] 2025-11-23 05:01:22,513 | INFO     | mean x: 1763858364.5
[2025-11-23 00:01:59] 2025-11-23 05:01:22,513 | INFO     | mean y: 2261306.8540856033
[2025-11-23 00:01:59] 2025-11-23 05:01:22,513 | INFO     | intersect: -6855229750.699629
[2025-11-23 00:01:59] 2025-11-23 05:01:22,513 | INFO     | chi2: 1.1058910800855042
[2025-11-23 00:01:59] 2025-11-23 05:01:22,513 | INFO     | current chi2=1.1058910800855042 (change=66.13005967783963 %)
[2025-11-23 00:01:59] 2025-11-23 05:01:22,513 | INFO     | sum of square deviations: 40891222510.0
[2025-11-23 00:01:59] 2025-11-23 05:01:22,517 | INFO     | sum of deviations: 148093684702.9999
[2025-11-23 00:01:59] 2025-11-23 05:01:22,517 | INFO     | mean x: 1763858517.0
[2025-11-23 00:01:59] 2025-11-23 05:01:22,517 | INFO     | mean y: 2263262.2200392927
[2025-11-23 00:01:59] 2025-11-23 05:01:22,517 | INFO     | intersect: -6385814448.428456
[2025-11-23 00:01:59] 2025-11-23 05:01:22,518 | INFO     | chi2: 1.0870258028433746
[2025-11-23 00:01:59] 2025-11-23 05:01:22,518 | INFO     | current chi2=1.0870258028433746 (change=1.7058892672026074 %)
[2025-11-23 00:01:59] 2025-11-23 05:01:22,518 | INFO     | left removable region: 20
[2025-11-23 00:01:59] 2025-11-23 05:01:22,518 | INFO     | sum of square deviations: 36035957522.0
[2025-11-23 00:01:59] 2025-11-23 05:01:22,521 | INFO     | sum of deviations: 175888538992.00003
[2025-11-23 00:01:59] 2025-11-23 05:01:22,521 | INFO     | mean x: 1763858486.5
[2025-11-23 00:01:59] 2025-11-23 05:01:22,522 | INFO     | mean y: 2272913.131147541
[2025-11-23 00:01:59] 2025-11-23 05:01:22,522 | INFO     | intersect: -8606975002.363312
[2025-11-23 00:01:59] 2025-11-23 05:01:22,522 | INFO     | chi2: 0.024696007064248585
[2025-11-23 00:01:59] 2025-11-23 05:01:22,522 | INFO     | current memory leak: 4.88 B/s (using 488 data points, chi2=0.02)
[2025-11-23 00:01:59] 2025-11-23 05:01:22,522 | INFO     | could have reported an average CPU frequency of 2304 MHz (21 samples)
[2025-11-23 00:01:59] 2025-11-23 05:01:22,522 | INFO     | ..............................
[2025-11-23 00:01:59] 2025-11-23 05:01:22,522 | INFO     | . Timing measurements:
[2025-11-23 00:01:59] 2025-11-23 05:01:22,522 | INFO     | . get job = 0 s
[2025-11-23 00:01:59] 2025-11-23 05:01:22,522 | INFO     | . initial setup = 3 s
[2025-11-23 00:01:59] 2025-11-23 05:01:22,522 | INFO     | . payload setup = 4 s
[2025-11-23 00:01:59] 2025-11-23 05:01:22,523 | INFO     | . stage-in = 0 s
[2025-11-23 00:01:59] 2025-11-23 05:01:22,523 | INFO     | . payload execution = 31659 s
[2025-11-23 00:01:59] 2025-11-23 05:01:22,523 | INFO     | . stage-out = 4 s
[2025-11-23 00:01:59] 2025-11-23 05:01:22,523 | INFO     | . log creation = 0 s
[2025-11-23 00:01:59] 2025-11-23 05:01:22,523 | INFO     | ..............................
[2025-11-23 00:01:59] 2025-11-23 05:01:22,567 | INFO     | 
[2025-11-23 00:01:59] 2025-11-23 05:01:22,567 | INFO     | job summary report
[2025-11-23 00:01:59] 2025-11-23 05:01:22,567 | INFO     | --------------------------------------------------
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | PanDA job id: 6895324653
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | task id: 47556137
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | errors: (none)
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | pilot state: finished 
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | transexitcode: 0
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | exeerrorcode: 0
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | exeerrordiag: 
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | exitcode: 0
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | exitmsg: OK
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | cpuconsumptiontime: 125770 s
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | nevents: 1000
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | neventsw: 0
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | pid: 1280491
[2025-11-23 00:01:59] 2025-11-23 05:01:22,568 | INFO     | pgrp: 1280491
[2025-11-23 00:01:59] 2025-11-23 05:01:22,569 | INFO     | corecount: 4
[2025-11-23 00:01:59] 2025-11-23 05:01:22,569 | INFO     | event service: False
[2025-11-23 00:01:59] 2025-11-23 05:01:22,569 | INFO     | sizes: {0: 2298818, 4: 2299080, 11: 2299108, 31668: 2338481, 31669: 2338480, 31673: 2347744, 31679: 2347934}
[2025-11-23 00:01:59] 2025-11-23 05:01:22,569 | INFO     | --------------------------------------------------
[2025-11-23 00:01:59] 2025-11-23 05:01:22,569 | INFO     | 
[2025-11-23 00:01:59] 2025-11-23 05:01:22,569 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/14
[2025-11-23 00:01:59] 2025-11-23 05:01:22,587 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,588 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 00:01:59] 2025-11-23 05:01:22,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,589 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 00:01:59] 2025-11-23 05:01:22,589 | INFO     | job 6895324653 has completed (purged errors)
[2025-11-23 00:01:59] 2025-11-23 05:01:22,589 | INFO     | overall cleanup function is called
[2025-11-23 00:01:59] 2025-11-23 05:01:23,600 | INFO     | --- collectZombieJob: --- 10, [1280491]
[2025-11-23 00:01:59] 2025-11-23 05:01:23,600 | INFO     | zombie collector waiting for pid 1280491
[2025-11-23 00:01:59] 2025-11-23 05:01:23,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 00:01:59] 2025-11-23 05:01:23,601 | INFO     | collected zombie processes
[2025-11-23 00:01:59] 2025-11-23 05:01:23,601 | INFO     | will attempt to kill all subprocesses of pid=1280491
[2025-11-23 00:01:59] 2025-11-23 05:01:23,905 | INFO     | process IDs to be killed: [1280491] (in reverse order)
[2025-11-23 00:01:59] 2025-11-23 05:01:24,011 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 00:01:59] 2025-11-23 05:01:24,011 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 00:01:59] 2025-11-23 05:01:24,020 | INFO     | did not find any defunct processes belonging to 1280491
[2025-11-23 00:01:59] 2025-11-23 05:01:24,029 | INFO     | did not find any defunct processes belonging to 1280491
[2025-11-23 00:01:59] 2025-11-23 05:01:24,029 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 00:01:59] 2025-11-23 05:01:24,030 | INFO     | ready for new job
[2025-11-23 00:01:59] 2025-11-23 05:01:24,030 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 00:01:59] 2025-11-23 05:01:24,032 | INFO     | ***************************************
[2025-11-23 00:01:59] 2025-11-23 05:01:24,032 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 00:01:59] 2025-11-23 05:01:24,032 | INFO     | ***************************************
[2025-11-23 00:01:59] 2025-11-23 05:01:24,032 | INFO     | 
[2025-11-23 00:01:59] 2025-11-23 05:01:24,038 | INFO     | architecture information:
[2025-11-23 00:01:59] 2025-11-23 05:01:24,038 | INFO     | executing command: cat /etc/os-release
[2025-11-23 00:01:59] 2025-11-23 05:01:24,050 | INFO     | cat /etc/os-release:
[2025-11-23 00:01:59] NAME="CentOS Linux"
[2025-11-23 00:01:59] VERSION="7 (Core)"
[2025-11-23 00:01:59] ID="centos"
[2025-11-23 00:01:59] ID_LIKE="rhel fedora"
[2025-11-23 00:01:59] VERSION_ID="7"
[2025-11-23 00:01:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 00:01:59] ANSI_COLOR="0;31"
[2025-11-23 00:01:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 00:01:59] HOME_URL="https://www.centos.org/"
[2025-11-23 00:01:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 00:01:59] 
[2025-11-23 00:01:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 00:01:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 00:01:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 00:01:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 00:01:59] 
[2025-11-23 00:01:59] 2025-11-23 05:01:24,051 | INFO     | ***************************************
[2025-11-23 00:01:59] 2025-11-23 05:01:24,553 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/14
[2025-11-23 00:01:59] 2025-11-23 05:01:24,570 | INFO     | sufficient remaining disk space (370013110272 B)
[2025-11-23 00:01:59] 2025-11-23 05:01:24,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 00:01:59] 2025-11-23 05:01:24,571 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 00:01:59] 2025-11-23 05:01:24,571 | INFO     | update_server=False
[2025-11-23 00:01:59] 2025-11-23 05:01:24,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 00:01:59] 2025-11-23 05:01:24,571 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 00:01:59] 2025-11-23 05:01:24,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:01:59] 2025-11-23 05:01:25,048 | INFO     | all data control threads have been joined
[2025-11-23 00:01:59] 2025-11-23 05:01:25,151 | INFO     | all payload control threads have been joined
[2025-11-23 00:01:59] 2025-11-23 05:01:25,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:01:59] 2025-11-23 05:01:25,318 | INFO     | aborting loop
[2025-11-23 00:01:59] 2025-11-23 05:01:25,572 | INFO     | [job] queue monitor thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:25,575 | INFO     | all job control threads have been joined
[2025-11-23 00:01:59] 2025-11-23 05:01:25,575 | INFO     | [job] retrieve thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:25,659 | INFO     | [data] copytool_in thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:25,794 | INFO     | [payload] failed_post thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:26,054 | INFO     | [data] control thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:26,057 | INFO     | [payload] validate_post thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:26,156 | INFO     | [payload] control thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:26,312 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:26,323 | INFO     | [job] job monitor thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:26,333 | INFO     | [job] validate thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:26,577 | INFO     | [data] copytool_out thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:26,580 | INFO     | [job] control thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:26,671 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:26,786 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:26,852 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:27,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 00:01:59] 2025-11-23 05:01:31,084 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 00:01:59] 2025-11-23 05:01:52,359 | INFO     | [monitor] cgroup control has ended
[2025-11-23 00:01:59] 2025-11-23 05:01:53,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124271896000320)>', '<ExcThread(monitor, started 124270583740160)>']
[2025-11-23 00:01:59] 2025-11-23 05:01:54,520 | INFO     | PID=1273210 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 00:01:59] 2025-11-23 05:01:54,520 | INFO     | .. there are 6 such processes running
[2025-11-23 00:01:59] 2025-11-23 05:01:54,521 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 00:01:59] 2025-11-23 05:01:54,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 00:01:59] 2025-11-23 05:01:54,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 00:01:59] 2025-11-23 05:01:54,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 00:01:59] 2025-11-23 05:01:54,521 | INFO     | [monitor] control thread has ended
[2025-11-23 00:01:59] 2025-11-23 05:01:58,973 | INFO     | all workflow threads have been joined
[2025-11-23 00:01:59] 2025-11-23 05:01:58,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 00:01:59] 2025-11-23 05:01:58,973 | INFO     | traces error code: 0
[2025-11-23 00:01:59] 2025-11-23 05:01:58,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 00:01:59] 2025-11-23 05:01:59,056 [wrapper] ==== pilot stdout END ====
[2025-11-23 00:01:59] 2025-11-23 05:01:59,059 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 00:01:59] 2025-11-23 05:01:59,064 [wrapper] pilotpid: 1273210
[2025-11-23 00:01:59] 2025-11-23 05:01:59,067 [wrapper] Pilot exit status: 0
[2025-11-23 00:01:59] 2025-11-23 05:01:59,078 [wrapper] pandaids: 6895324653
[2025-11-23 00:01:59] 2025-11-23 05:01:59,140 [wrapper] cleanup supervisor_pilot 1662472 1273211
[2025-11-23 00:01:59] 2025-11-23 05:01:59,142 [wrapper] Test setup, not cleaning
[2025-11-23 00:01:59] 2025-11-23 05:01:59,144 [wrapper] apfmon messages muted
[2025-11-23 00:01:59] 2025-11-23 05:01:59,146 [wrapper] ==== wrapper stdout END ====
[2025-11-23 00:01:59] 2025-11-23 05:01:59,149 [wrapper] ==== wrapper stderr END ====
[2025-11-23 00:01:59]  *** Error codes and diagnostics ***
[2025-11-23 00:01:59]     "exeErrorCode": 0,
[2025-11-23 00:01:59]     "exeErrorDiag": "",
[2025-11-23 00:01:59]     "pilotErrorCode": 0,
[2025-11-23 00:01:59]     "pilotErrorDiag": "",
[2025-11-23 00:01:59]  *** Listing of results directory ***
[2025-11-23 00:01:59] total 1297376
[2025-11-23 00:01:59] -rw-r--r-- 1 whitlerd whitlerd    576529 Nov 21 09:24 pilot3.tar.gz
[2025-11-23 00:01:59] -rw-r--r-- 1 whitlerd whitlerd      5112 Nov 21 09:26 queuedata.json
[2025-11-23 00:01:59] -rwx------ 1 whitlerd whitlerd     36292 Nov 21 09:26 runpilot2-wrapper.sh
[2025-11-23 00:01:59] -rw-rw-r-- 1 whitlerd whitlerd       100 Nov 22 15:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 00:01:59] -rwxr-xr-x 1 whitlerd whitlerd      7986 Nov 22 15:12 run_atlas
[2025-11-23 00:01:59] -rw-rw-r-- 1 whitlerd whitlerd       105 Nov 22 15:12 job.xml
[2025-11-23 00:01:59] -rw-r--r-- 2 whitlerd whitlerd 408874276 Nov 22 15:12 EVNT.47483658._000026.pool.root.1
[2025-11-23 00:01:59] drwxrwx--x 2 whitlerd whitlerd      4096 Nov 22 15:12 shared
[2025-11-23 00:01:59] -rw-r--r-- 2 whitlerd whitlerd    590102 Nov 22 15:12 input.tar.gz
[2025-11-23 00:01:59] -rw-r--r-- 2 whitlerd whitlerd     15847 Nov 22 15:12 start_atlas.sh
[2025-11-23 00:01:59] -rw-rw-r-- 1 whitlerd whitlerd      9475 Nov 22 15:12 init_data.xml
[2025-11-23 00:01:59] -rw-rw-r-- 1 whitlerd whitlerd         0 Nov 22 15:12 boinc_setup_complete
[2025-11-23 00:01:59] -rw-rw-r-- 1 whitlerd whitlerd         0 Nov 22 15:12 boinc_lockfile
[2025-11-23 00:01:59] -rw-rw-r-- 1 whitlerd whitlerd      2784 Nov 22 15:12 pandaJob.out
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd    989768 Nov 22 15:13 agis_schedconf.cvmfs.json
[2025-11-23 00:01:59] drwx------ 5 whitlerd whitlerd      4096 Nov 22 15:13 pilot3
[2025-11-23 00:01:59] -rw-rw-r-- 1 whitlerd whitlerd       532 Nov 22 23:55 boinc_task_state.xml
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd 904064682 Nov 23 00:00 HITS.47556137._000254.pool.root.1
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd      1033 Nov 23 00:01 memory_monitor_summary.json
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd   1526164 Nov 23 00:01 agis_ddmendpoints.agis.ALL.json
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd   1343278 Nov 23 00:01 log.47556137._000254.job.log.tgz.1
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd      8552 Nov 23 00:01 heartbeat.json
[2025-11-23 00:01:59] -rw-rw-r-- 1 whitlerd whitlerd      8192 Nov 23 00:01 boinc_mmap_file
[2025-11-23 00:01:59] -rw-rw-r-- 1 whitlerd whitlerd        29 Nov 23 00:01 wrapper_checkpoint.txt
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd        95 Nov 23 00:01 pilot_heartbeat.json
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd      4839 Nov 23 00:01 pilotlog.txt
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd   4479565 Nov 23 00:01 log.47556137._000254.job.log.1
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd       353 Nov 23 00:01 output.list
[2025-11-23 00:01:59] -rw-rw-r-- 1 whitlerd whitlerd       620 Nov 23 00:01 runtime_log
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd   5847040 Nov 23 00:01 result.tar.gz
[2025-11-23 00:01:59] -rw-rw-r-- 1 whitlerd whitlerd      9042 Nov 23 00:01 runtime_log.err
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd       657 Nov 23 00:01 CqjKDmDHhg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHUJKDm63ENUo.diag
[2025-11-23 00:01:59] -rw-rw-r-- 1 whitlerd whitlerd     21369 Nov 23 00:01 stderr.txt
[2025-11-23 00:01:59] HITS file was successfully produced:
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd 904064682 Nov 23 00:00 shared/HITS.pool.root.1
[2025-11-23 00:01:59]  *** Contents of shared directory: ***
[2025-11-23 00:01:59] total 1288484
[2025-11-23 00:01:59] -rw-r--r-- 2 whitlerd whitlerd 408874276 Nov 22 15:12 ATLAS.root_0
[2025-11-23 00:01:59] -rw-r--r-- 2 whitlerd whitlerd    590102 Nov 22 15:12 input.tar.gz
[2025-11-23 00:01:59] -rw-r--r-- 2 whitlerd whitlerd     15847 Nov 22 15:12 start_atlas.sh
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd 904064682 Nov 23 00:00 HITS.pool.root.1
[2025-11-23 00:01:59] -rw------- 1 whitlerd whitlerd   5847040 Nov 23 00:01 result.tar.gz
00:02:00 (1268961): run_atlas exited; CPU time 126748.037327
00:02:00 (1268961): called boinc_finish(0)

</stderr_txt>
]]>

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