Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:23:57 (31190): wrapper (7.7.26015): starting
22:23:57 (31190): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 22:23:57] Arguments: --nthreads 8
[2025-11-24 22:23:57] Threads: 8
[2025-11-24 22:23:57] Checking for CVMFS
[2025-11-24 22:23:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:23:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:23:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:24:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:24:01] 2.11.2.0 6477 282879 141468 153259 0 75 21903355 25165825 1027 130560 20 129689924 99.869 79478395 2620 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 22:24:01] CVMFS is ok
[2025-11-24 22:24:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:24:01] Checking for apptainer binary...
[2025-11-24 22:24:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:24:01] Running /usr/bin/apptainer --version
[2025-11-24 22:24:01] apptainer version 1.3.2-1.el7
[2025-11-24 22:24:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:24:21] cg-vwn261.simple-grid.lan
[2025-11-24 22:24:21] apptainer works
[2025-11-24 22:24:21] Set ATHENA_PROC_NUMBER=8
[2025-11-24 22:24:21] Set ATHENA_CORE_NUMBER=8
[2025-11-24 22:24:21] Starting ATLAS job with PandaID=6891106431
[2025-11-24 22:24:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:57:31]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:57:31] 2025-11-25 21:56:44,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:57:31] 2025-11-25 21:56:46,178 | INFO     | time since job start (88081s) is within the limit (172800.0s)
[2025-11-25 22:57:31] 2025-11-25 21:56:46,838 | INFO     | monitor loop #5925: job 0:6891106431 is in state 'finished'
[2025-11-25 22:57:31] 2025-11-25 21:56:46,839 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:57:31] 2025-11-25 21:56:48,185 | INFO     | time since job start (88083s) is within the limit (172800.0s)
[2025-11-25 22:57:31] 2025-11-25 21:56:49,348 | INFO     | monitor loop #5926: job 0:6891106431 is in state 'finished'
[2025-11-25 22:57:31] 2025-11-25 21:56:49,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:57:31] 2025-11-25 21:56:50,199 | INFO     | time since job start (88085s) is within the limit (172800.0s)
[2025-11-25 22:57:31] 2025-11-25 21:56:51,858 | INFO     | monitor loop #5927: job 0:6891106431 is in state 'finished'
[2025-11-25 22:57:31] 2025-11-25 21:56:51,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:57:31] 2025-11-25 21:56:52,211 | INFO     | time since job start (88087s) is within the limit (172800.0s)
[2025-11-25 22:57:31] 2025-11-25 21:56:54,218 | INFO     | time since job start (88089s) is within the limit (172800.0s)
[2025-11-25 22:57:31] 2025-11-25 21:56:54,369 | INFO     | monitor loop #5928: job 0:6891106431 is in state 'finished'
[2025-11-25 22:57:31] 2025-11-25 21:56:54,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:57:31] 2025-11-25 21:56:54,721 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 22:57:31] 2025-11-25 21:56:54,723 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 22:57:31] 2025-11-25 21:56:54,725 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6891106431/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 22:57:31] 2025-11-25 21:56:54,726 | INFO     | extracted standard info from prmon json
[2025-11-25 22:57:31] 2025-11-25 21:56:54,726 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 22:57:31] 2025-11-25 21:56:54,726 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:57:31] 2025-11-25 21:56:54,765 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:57:31] 2025-11-25 21:56:54,767 | INFO     | sum of square deviations: 912473900787.5083
[2025-11-25 22:57:31] 2025-11-25 21:56:54,854 | INFO     | sum of deviations: 4144950957238.5435
[2025-11-25 22:57:31] 2025-11-25 21:56:54,854 | INFO     | mean x: 1764063973.2121425
[2025-11-25 22:57:31] 2025-11-25 21:56:54,855 | INFO     | mean y: 2833117.152826239
[2025-11-25 22:57:31] 2025-11-25 21:56:54,855 | INFO     | intersect: -8010501453.934775
[2025-11-25 22:57:31] 2025-11-25 21:56:54,856 | INFO     | chi2: 29.14006397261547
[2025-11-25 22:57:31] 2025-11-25 21:56:54,858 | INFO     | sum of square deviations: 902956428850.1364
[2025-11-25 22:57:31] 2025-11-25 21:56:54,912 | INFO     | sum of deviations: 4613478856792.644
[2025-11-25 22:57:31] 2025-11-25 21:56:54,912 | INFO     | mean x: 1764063820.7163866
[2025-11-25 22:57:31] 2025-11-25 21:56:54,912 | INFO     | mean y: 2840623.31022409
[2025-11-25 22:57:31] 2025-11-25 21:56:54,913 | INFO     | intersect: -9010297639.929983
[2025-11-25 22:57:31] 2025-11-25 21:56:54,914 | INFO     | chi2: 25.99574209166751
[2025-11-25 22:57:31] 2025-11-25 21:56:54,914 | INFO     | current chi2=25.99574209166751 (change=10.79037398100036 %)
[2025-11-25 22:57:31] 2025-11-25 21:56:54,914 | INFO     | right removable region: 1427
[2025-11-25 22:57:31] 2025-11-25 21:56:54,917 | INFO     | sum of square deviations: 902955369280.1362
[2025-11-25 22:57:31] 2025-11-25 21:56:54,991 | INFO     | sum of deviations: 3540393394442.822
[2025-11-25 22:57:31] 2025-11-25 21:56:54,991 | INFO     | mean x: 1764064125.7163866
[2025-11-25 22:57:31] 2025-11-25 21:56:54,992 | INFO     | mean y: 2842802.824229692
[2025-11-25 22:57:31] 2025-11-25 21:56:54,992 | INFO     | intersect: -6913867801.642231
[2025-11-25 22:57:31] 2025-11-25 21:56:54,993 | INFO     | chi2: 24.231199075042323
[2025-11-25 22:57:31] 2025-11-25 21:56:54,993 | INFO     | current chi2=24.231199075042323 (change=16.845758822582813 %)
[2025-11-25 22:57:31] 2025-11-25 21:56:54,994 | INFO     | left removable region: 10
[2025-11-25 22:57:31] 2025-11-25 21:56:54,996 | INFO     | sum of square deviations: 882249341871.7354
[2025-11-25 22:57:31] 2025-11-25 21:56:55,054 | INFO     | sum of deviations: 3565713421582.0015
[2025-11-25 22:57:31] 2025-11-25 21:56:55,055 | INFO     | mean x: 1764064095.2258291
[2025-11-25 22:57:31] 2025-11-25 21:56:55,055 | INFO     | mean y: 2861174.759350741
[2025-11-25 22:57:31] 2025-11-25 21:56:55,055 | INFO     | intersect: -7126809228.318301
[2025-11-25 22:57:31] 2025-11-25 21:56:55,057 | INFO     | chi2: 16.18101538805677
[2025-11-25 22:57:31] 2025-11-25 21:56:55,057 | INFO     | current memory leak: 4.04 B/s (using 1417 data points, chi2=16.18)
[2025-11-25 22:57:31] 2025-11-25 21:56:55,060 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-25 22:57:31] 2025-11-25 21:56:55,060 | INFO     | ..............................
[2025-11-25 22:57:31] 2025-11-25 21:56:55,060 | INFO     | . Timing measurements:
[2025-11-25 22:57:31] 2025-11-25 21:56:55,060 | INFO     | . get job = 0 s
[2025-11-25 22:57:31] 2025-11-25 21:56:55,060 | INFO     | . initial setup = 11 s
[2025-11-25 22:57:31] 2025-11-25 21:56:55,060 | INFO     | . payload setup = 191 s
[2025-11-25 22:57:31] 2025-11-25 21:56:55,060 | INFO     | . stage-in = 0 s
[2025-11-25 22:57:31] 2025-11-25 21:56:55,061 | INFO     | . payload execution = 87578 s
[2025-11-25 22:57:31] 2025-11-25 21:56:55,061 | INFO     | . stage-out = 6 s
[2025-11-25 22:57:31] 2025-11-25 21:56:55,061 | INFO     | . log creation = 2 s
[2025-11-25 22:57:31] 2025-11-25 21:56:55,061 | INFO     | ..............................
[2025-11-25 22:57:31] 2025-11-25 21:56:55,546 | INFO     | 
[2025-11-25 22:57:31] 2025-11-25 21:56:55,547 | INFO     | job summary report
[2025-11-25 22:57:31] 2025-11-25 21:56:55,547 | INFO     | --------------------------------------------------
[2025-11-25 22:57:31] 2025-11-25 21:56:55,547 | INFO     | PanDA job id: 6891106431
[2025-11-25 22:57:31] 2025-11-25 21:56:55,547 | INFO     | task id: 47483661
[2025-11-25 22:57:31] 2025-11-25 21:56:55,547 | INFO     | errors: (none)
[2025-11-25 22:57:31] 2025-11-25 21:56:55,547 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:57:31] 2025-11-25 21:56:55,547 | INFO     | pilot state: finished 
[2025-11-25 22:57:31] 2025-11-25 21:56:55,547 | INFO     | transexitcode: 0
[2025-11-25 22:57:31] 2025-11-25 21:56:55,547 | INFO     | exeerrorcode: 0
[2025-11-25 22:57:31] 2025-11-25 21:56:55,548 | INFO     | exeerrordiag: 
[2025-11-25 22:57:31] 2025-11-25 21:56:55,548 | INFO     | exitcode: 0
[2025-11-25 22:57:31] 2025-11-25 21:56:55,548 | INFO     | exitmsg: OK
[2025-11-25 22:57:31] 2025-11-25 21:56:55,548 | INFO     | cpuconsumptiontime: 338468 s
[2025-11-25 22:57:31] 2025-11-25 21:56:55,548 | INFO     | nevents: 1000
[2025-11-25 22:57:31] 2025-11-25 21:56:55,548 | INFO     | neventsw: 0
[2025-11-25 22:57:31] 2025-11-25 21:56:55,548 | INFO     | pid: 9056
[2025-11-25 22:57:31] 2025-11-25 21:56:55,548 | INFO     | pgrp: 9056
[2025-11-25 22:57:31] 2025-11-25 21:56:55,548 | INFO     | corecount: 8
[2025-11-25 22:57:31] 2025-11-25 21:56:55,548 | INFO     | event service: False
[2025-11-25 22:57:31] 2025-11-25 21:56:55,548 | INFO     | sizes: {0: 2283465, 1: 2284150, 2: 2284349, 13: 2284349, 23: 2284405, 34: 2284433, 45: 2284589, 56: 2284617, 66: 2284645, 77: 2284673, 88: 2284729, 95: 2285299, 99
[2025-11-25 22:57:31] 2025-11-25 21:56:55,549 | INFO     | --------------------------------------------------
[2025-11-25 22:57:31] 2025-11-25 21:56:55,549 | INFO     | 
[2025-11-25 22:57:31] 2025-11-25 21:56:55,549 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-25 22:57:31] 2025-11-25 21:56:55,896 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,896 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,896 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,897 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,898 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,898 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,898 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:57:31] 2025-11-25 21:56:55,898 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,898 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:57:31] 2025-11-25 21:56:55,898 | INFO     | job 6891106431 has completed (purged errors)
[2025-11-25 22:57:31] 2025-11-25 21:56:55,898 | INFO     | overall cleanup function is called
[2025-11-25 22:57:31] 2025-11-25 21:56:56,924 | INFO     | --- collectZombieJob: --- 10, [9056]
[2025-11-25 22:57:31] 2025-11-25 21:56:56,925 | INFO     | zombie collector waiting for pid 9056
[2025-11-25 22:57:31] 2025-11-25 21:56:56,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:57:31] 2025-11-25 21:56:56,925 | INFO     | collected zombie processes
[2025-11-25 22:57:31] 2025-11-25 21:56:56,925 | INFO     | will attempt to kill all subprocesses of pid=9056
[2025-11-25 22:57:31] 2025-11-25 21:56:57,072 | INFO     | process IDs to be killed: [9056] (in reverse order)
[2025-11-25 22:57:31] 2025-11-25 21:56:58,142 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:57:31] 2025-11-25 21:56:58,143 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:57:31] 2025-11-25 21:56:58,146 | INFO     | did not find any defunct processes belonging to 9056
[2025-11-25 22:57:31] 2025-11-25 21:56:58,149 | INFO     | did not find any defunct processes belonging to 9056
[2025-11-25 22:57:31] 2025-11-25 21:56:58,201 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:57:31] 2025-11-25 21:56:58,201 | INFO     | ready for new job
[2025-11-25 22:57:31] 2025-11-25 21:56:58,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:57:31] 2025-11-25 21:56:58,208 | INFO     | ***************************************
[2025-11-25 22:57:31] 2025-11-25 21:56:58,209 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:57:31] 2025-11-25 21:56:58,209 | INFO     | ***************************************
[2025-11-25 22:57:31] 2025-11-25 21:56:58,209 | INFO     | 
[2025-11-25 22:57:31] 2025-11-25 21:56:58,209 | INFO     | pilot is running in a VM
[2025-11-25 22:57:31] 2025-11-25 21:56:58,209 | INFO     | architecture information:
[2025-11-25 22:57:31] 2025-11-25 21:56:58,214 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:57:31] 2025-11-25 21:56:58,498 | INFO     | cat /etc/os-release:
[2025-11-25 22:57:31] NAME="CentOS Linux"
[2025-11-25 22:57:31] VERSION="7 (Core)"
[2025-11-25 22:57:31] ID="centos"
[2025-11-25 22:57:31] ID_LIKE="rhel fedora"
[2025-11-25 22:57:31] VERSION_ID="7"
[2025-11-25 22:57:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:57:31] ANSI_COLOR="0;31"
[2025-11-25 22:57:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:57:31] HOME_URL="https://www.centos.org/"
[2025-11-25 22:57:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:57:31] 
[2025-11-25 22:57:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:57:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:57:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:57:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:57:31] 
[2025-11-25 22:57:31] 2025-11-25 21:56:58,498 | INFO     | ***************************************
[2025-11-25 22:57:31] 2025-11-25 21:56:59,001 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-25 22:57:31] 2025-11-25 21:56:59,143 | INFO     | sufficient remaining disk space (495237201920 B)
[2025-11-25 22:57:31] 2025-11-25 21:56:59,144 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:57:31] 2025-11-25 21:56:59,144 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:57:31] 2025-11-25 21:56:59,144 | INFO     | update_server=False
[2025-11-25 22:57:31] 2025-11-25 21:56:59,144 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:57:31] 2025-11-25 21:56:59,145 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:57:31] 2025-11-25 21:56:59,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:57:31] 2025-11-25 21:56:59,389 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 22:57:31] 2025-11-25 21:56:59,390 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 22:57:31] 2025-11-25 21:56:59,390 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:57:31] 2025-11-25 21:56:59,390 | INFO     | will abort loop
[2025-11-25 22:57:31] 2025-11-25 21:56:59,660 | INFO     | all data control threads have been joined
[2025-11-25 22:57:31] 2025-11-25 21:56:59,787 | INFO     | all job control threads have been joined
[2025-11-25 22:57:31] 2025-11-25 21:57:00,150 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:00,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:57:31] 2025-11-25 21:57:00,299 | INFO     | all payload control threads have been joined
[2025-11-25 22:57:31] 2025-11-25 21:57:00,395 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:00,525 | INFO     | [job] validate thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:00,592 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:00,666 | INFO     | [data] control thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:00,723 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:00,764 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:00,792 | INFO     | [job] control thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:00,807 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:00,996 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:01,152 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:01,212 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:01,305 | INFO     | [payload] control thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:01,335 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:01,456 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:03,155 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:57:31] 2025-11-25 21:57:18,517 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:57:31] 2025-11-25 21:57:19,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139823735797568)>', '<ExcThread(monitor, started 139823297836800)>']
[2025-11-25 22:57:31] 2025-11-25 21:57:24,942 | INFO     | all workflow threads have been joined
[2025-11-25 22:57:31] 2025-11-25 21:57:24,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:57:31] 2025-11-25 21:57:24,943 | INFO     | traces error code: 0
[2025-11-25 22:57:31] 2025-11-25 21:57:24,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:57:31] 2025-11-25 21:57:27,453 | INFO     | PID=2520 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 22:57:31] 2025-11-25 21:57:27,454 | INFO     | .. there are 9 such processes running
[2025-11-25 22:57:31] 2025-11-25 21:57:27,455 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:57:31] 2025-11-25 21:57:27,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:57:31] 2025-11-25 21:57:27,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:57:31] 2025-11-25 21:57:27,456 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:57:31] 2025-11-25 21:57:27,456 | INFO     | [monitor] control thread has ended
[2025-11-25 22:57:31] 2025-11-25 21:57:27,777 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:57:31] 2025-11-25 21:57:27,813 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:57:31] 2025-11-25 21:57:27,873 [wrapper] pilotpid: 2520
[2025-11-25 22:57:31] 2025-11-25 21:57:28,000 [wrapper] Pilot exit status: 0
[2025-11-25 22:57:31] 2025-11-25 21:57:28,383 [wrapper] pandaids: 6891106431
[2025-11-25 22:57:31] 2025-11-25 21:57:29,047 [wrapper] cleanup supervisor_pilot 19653 2521
[2025-11-25 22:57:31] 2025-11-25 21:57:29,062 [wrapper] Test setup, not cleaning
[2025-11-25 22:57:31] 2025-11-25 21:57:29,128 [wrapper] apfmon messages muted
[2025-11-25 22:57:31] 2025-11-25 21:57:29,179 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:57:31] 2025-11-25 21:57:29,242 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:57:31]  *** Error codes and diagnostics ***
[2025-11-25 22:57:31]     "exeErrorCode": 0,
[2025-11-25 22:57:31]     "exeErrorDiag": "",
[2025-11-25 22:57:31]     "pilotErrorCode": 0,
[2025-11-25 22:57:31]     "pilotErrorDiag": "",
[2025-11-25 22:57:31]  *** Listing of results directory ***
[2025-11-25 22:57:31] total 1332072
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc    576529 Nov 18 07:54 pilot3.tar.gz
[2025-11-25 22:57:31] -rwx------. 1 boinc boinc     36292 Nov 18 07:57 runpilot2-wrapper.sh
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc      5112 Nov 18 07:57 queuedata.json
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc       100 Nov 24 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:57:31] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 22:23 run_atlas
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc       105 Nov 24 22:23 job.xml
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc      6391 Nov 24 22:23 init_data.xml
[2025-11-25 22:57:31] -rw-r--r--. 2 boinc boinc 410157147 Nov 24 22:23 EVNT.47483658._000263.pool.root.1
[2025-11-25 22:57:31] -rw-r--r--. 2 boinc boinc     15120 Nov 24 22:23 start_atlas.sh
[2025-11-25 22:57:31] drwxrwx--x. 2 boinc boinc        68 Nov 24 22:23 shared
[2025-11-25 22:57:31] -rw-r--r--. 2 boinc boinc    590098 Nov 24 22:23 input.tar.gz
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc         0 Nov 24 22:23 boinc_lockfile
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc      2770 Nov 24 22:24 pandaJob.out
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc    991801 Nov 24 22:28 agis_schedconf.cvmfs.json
[2025-11-25 22:57:31] drwx------. 5 boinc boinc      4096 Nov 24 22:28 pilot3
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc       533 Nov 25 22:29 boinc_task_state.xml
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc 921506827 Nov 25 22:53 HITS.47483661._002321.pool.root.1
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc      1033 Nov 25 22:55 memory_monitor_summary.json
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc   1516240 Nov 25 22:55 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc   2516463 Nov 25 22:55 log.47483661._002321.job.log.tgz.1
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc      7954 Nov 25 22:56 heartbeat.json
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc        29 Nov 25 22:57 wrapper_checkpoint.txt
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc      8192 Nov 25 22:57 boinc_mmap_file
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc        95 Nov 25 22:57 pilot_heartbeat.json
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc       819 Nov 25 22:57 pilotlog.txt
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc  11723217 Nov 25 22:57 log.47483661._002321.job.log.1
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc       353 Nov 25 22:57 output.list
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc       620 Nov 25 22:57 runtime_log
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc  14254080 Nov 25 22:57 result.tar.gz
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc       662 Nov 25 22:57 Y8cKDmLpUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFNKODmQMlOIo.diag
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc      8703 Nov 25 22:57 runtime_log.err
[2025-11-25 22:57:31] -rw-r--r--. 1 boinc boinc     21418 Nov 25 22:57 stderr.txt
[2025-11-25 22:57:31] HITS file was successfully produced:
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc 921506827 Nov 25 22:53 shared/HITS.pool.root.1
[2025-11-25 22:57:31]  *** Contents of shared directory: ***
[2025-11-25 22:57:31] total 1314976
[2025-11-25 22:57:31] -rw-r--r--. 2 boinc boinc 410157147 Nov 24 22:23 ATLAS.root_0
[2025-11-25 22:57:31] -rw-r--r--. 2 boinc boinc     15120 Nov 24 22:23 start_atlas.sh
[2025-11-25 22:57:31] -rw-r--r--. 2 boinc boinc    590098 Nov 24 22:23 input.tar.gz
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc 921506827 Nov 25 22:53 HITS.pool.root.1
[2025-11-25 22:57:31] -rw-------. 1 boinc boinc  14254080 Nov 25 22:57 result.tar.gz
22:57:33 (31190): run_atlas exited; CPU time 338914.250868
22:57:33 (31190): called boinc_finish(0)

</stderr_txt>
]]>

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