Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:47:47 (7355): wrapper (7.7.26015): starting
22:47:47 (7355): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 22:47:47] Arguments: --nthreads 8
[2025-11-24 22:47:47] Threads: 8
[2025-11-24 22:47:47] Checking for CVMFS
[2025-11-24 22:47:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:47:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:47:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:47:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:47:50] 2.11.2.0 27084 282875 140004 153259 2 85 16484563 25165825 4632 130560 11 136374989 99.879 77003495 2893 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 22:47:50] CVMFS is ok
[2025-11-24 22:47:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:47:50] Checking for apptainer binary...
[2025-11-24 22:47:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:47:50] Running /usr/bin/apptainer --version
[2025-11-24 22:47:50] apptainer version 1.3.2-1.el7
[2025-11-24 22:47:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:48:06] cg-vwn405.simple-grid.lan
[2025-11-24 22:48:06] apptainer works
[2025-11-24 22:48:06] Set ATHENA_PROC_NUMBER=8
[2025-11-24 22:48:06] Set ATHENA_CORE_NUMBER=8
[2025-11-24 22:48:06] Starting ATLAS job with PandaID=6893883500
[2025-11-24 22:48:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:41:43]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:41:43] 2025-11-25 23:41:01,001 | INFO     | monitor loop #6202: job 0:6893883500 is in state 'finished'
[2025-11-26 00:41:43] 2025-11-25 23:41:01,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:41:43] 2025-11-25 23:41:01,281 | INFO     | time since job start (92947s) is within the limit (172800.0s)
[2025-11-26 00:41:43] 2025-11-25 23:41:03,290 | INFO     | time since job start (92949s) is within the limit (172800.0s)
[2025-11-26 00:41:43] 2025-11-25 23:41:03,509 | INFO     | monitor loop #6203: job 0:6893883500 is in state 'finished'
[2025-11-26 00:41:43] 2025-11-25 23:41:03,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:41:43] 2025-11-25 23:41:05,296 | INFO     | time since job start (92951s) is within the limit (172800.0s)
[2025-11-26 00:41:43] 2025-11-25 23:41:06,020 | INFO     | monitor loop #6204: job 0:6893883500 is in state 'finished'
[2025-11-26 00:41:43] 2025-11-25 23:41:06,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:41:43] 2025-11-25 23:41:07,308 | INFO     | time since job start (92953s) is within the limit (172800.0s)
[2025-11-26 00:41:43] 2025-11-25 23:41:08,526 | INFO     | monitor loop #6205: job 0:6893883500 is in state 'finished'
[2025-11-26 00:41:43] 2025-11-25 23:41:08,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:41:43] 2025-11-25 23:41:09,326 | INFO     | time since job start (92955s) is within the limit (172800.0s)
[2025-11-26 00:41:43] 2025-11-25 23:41:10,735 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 00:41:43] 2025-11-25 23:41:10,736 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 00:41:43] 2025-11-25 23:41:10,738 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6893883500/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:41:43] 2025-11-25 23:41:10,738 | INFO     | extracted standard info from prmon json
[2025-11-26 00:41:43] 2025-11-25 23:41:10,739 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:41:43] 2025-11-25 23:41:10,739 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:41:43] 2025-11-25 23:41:10,766 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:41:43] 2025-11-25 23:41:10,769 | INFO     | sum of square deviations: 1080382010965.1841
[2025-11-26 00:41:43] 2025-11-25 23:41:10,837 | INFO     | sum of deviations: 3295558083826.514
[2025-11-26 00:41:43] 2025-11-25 23:41:10,837 | INFO     | mean x: 1764067838.7434037
[2025-11-26 00:41:43] 2025-11-25 23:41:10,837 | INFO     | mean y: 2834722.1503957785
[2025-11-26 00:41:43] 2025-11-25 23:41:10,837 | INFO     | intersect: -5378213802.709333
[2025-11-26 00:41:43] 2025-11-25 23:41:10,839 | INFO     | chi2: 29.37144663372671
[2025-11-26 00:41:43] 2025-11-25 23:41:10,841 | INFO     | sum of square deviations: 1069728041927.4269
[2025-11-26 00:41:43] 2025-11-25 23:41:10,910 | INFO     | sum of deviations: 3789401379043.6484
[2025-11-26 00:41:43] 2025-11-25 23:41:10,911 | INFO     | mean x: 1764067686.2475183
[2025-11-26 00:41:43] 2025-11-25 23:41:10,911 | INFO     | mean y: 2841789.8378557246
[2025-11-26 00:41:43] 2025-11-25 23:41:10,911 | INFO     | intersect: -6246186244.379271
[2025-11-26 00:41:43] 2025-11-25 23:41:10,913 | INFO     | chi2: 26.18274214388591
[2025-11-26 00:41:43] 2025-11-25 23:41:10,913 | INFO     | current chi2=26.18274214388591 (change=10.856477481702472 %)
[2025-11-26 00:41:43] 2025-11-25 23:41:10,913 | INFO     | right removable region: 1510
[2025-11-26 00:41:43] 2025-11-25 23:41:10,915 | INFO     | sum of square deviations: 1069726892077.4282
[2025-11-26 00:41:43] 2025-11-25 23:41:10,981 | INFO     | sum of deviations: 2677326836717.2573
[2025-11-26 00:41:43] 2025-11-25 23:41:10,981 | INFO     | mean x: 1764067991.2475183
[2025-11-26 00:41:43] 2025-11-25 23:41:10,981 | INFO     | mean y: 2843570.0046326937
[2025-11-26 00:41:43] 2025-11-25 23:41:10,981 | INFO     | intersect: -4412289497.828001
[2025-11-26 00:41:43] 2025-11-25 23:41:10,983 | INFO     | chi2: 24.90906519473522
[2025-11-26 00:41:43] 2025-11-25 23:41:10,983 | INFO     | current chi2=24.90906519473522 (change=15.192923571791034 %)
[2025-11-26 00:41:43] 2025-11-25 23:41:10,983 | INFO     | left removable region: 10
[2025-11-26 00:41:43] 2025-11-25 23:41:10,986 | INFO     | sum of square deviations: 1046534069860.1821
[2025-11-26 00:41:43] 2025-11-25 23:41:11,043 | INFO     | monitor loop #6206: job 0:6893883500 is in state 'finished'
[2025-11-26 00:41:43] 2025-11-25 23:41:11,044 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:41:43] 2025-11-25 23:41:11,050 | INFO     | sum of deviations: 2753881284324.0083
[2025-11-26 00:41:43] 2025-11-25 23:41:11,050 | INFO     | mean x: 1764067960.7566667
[2025-11-26 00:41:43] 2025-11-25 23:41:11,050 | INFO     | mean y: 2859870.0986666665
[2025-11-26 00:41:43] 2025-11-25 23:41:11,050 | INFO     | intersect: -4639161714.590345
[2025-11-26 00:41:43] 2025-11-25 23:41:11,052 | INFO     | chi2: 17.80962854286247
[2025-11-26 00:41:43] 2025-11-25 23:41:11,053 | INFO     | current memory leak: 2.63 B/s (using 1500 data points, chi2=17.81)
[2025-11-26 00:41:43] 2025-11-25 23:41:11,055 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-26 00:41:43] 2025-11-25 23:41:11,055 | INFO     | ..............................
[2025-11-26 00:41:43] 2025-11-25 23:41:11,055 | INFO     | . Timing measurements:
[2025-11-26 00:41:43] 2025-11-25 23:41:11,055 | INFO     | . get job = 0 s
[2025-11-26 00:41:43] 2025-11-25 23:41:11,055 | INFO     | . initial setup = 10 s
[2025-11-26 00:41:43] 2025-11-25 23:41:11,055 | INFO     | . payload setup = 156 s
[2025-11-26 00:41:43] 2025-11-25 23:41:11,055 | INFO     | . stage-in = 0 s
[2025-11-26 00:41:43] 2025-11-25 23:41:11,055 | INFO     | . payload execution = 92579 s
[2025-11-26 00:41:43] 2025-11-25 23:41:11,056 | INFO     | . stage-out = 3 s
[2025-11-26 00:41:43] 2025-11-25 23:41:11,056 | INFO     | . log creation = 1 s
[2025-11-26 00:41:43] 2025-11-25 23:41:11,056 | INFO     | ..............................
[2025-11-26 00:41:43] 2025-11-25 23:41:11,181 | INFO     | 
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | job summary report
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | --------------------------------------------------
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | PanDA job id: 6893883500
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | task id: 47523449
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | errors: (none)
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | pilot state: finished 
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | transexitcode: 0
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | exeerrorcode: 0
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | exeerrordiag: 
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | exitcode: 0
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | exitmsg: OK
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | cpuconsumptiontime: 345154 s
[2025-11-26 00:41:43] 2025-11-25 23:41:11,182 | INFO     | nevents: 1000
[2025-11-26 00:41:43] 2025-11-25 23:41:11,183 | INFO     | neventsw: 0
[2025-11-26 00:41:43] 2025-11-25 23:41:11,183 | INFO     | pid: 17921
[2025-11-26 00:41:43] 2025-11-25 23:41:11,183 | INFO     | pgrp: 17921
[2025-11-26 00:41:43] 2025-11-25 23:41:11,183 | INFO     | corecount: 8
[2025-11-26 00:41:43] 2025-11-25 23:41:11,183 | INFO     | event service: False
[2025-11-26 00:41:43] 2025-11-25 23:41:11,183 | INFO     | sizes: {0: 2283481, 1: 2284166, 2: 2284365, 13: 2284365, 23: 2284421, 34: 2284449, 45: 2284605, 56: 2284633, 66: 2284661, 77: 2284689, 88: 2284745, 98: 2285053, 99
[2025-11-26 00:41:43] 2025-11-25 23:41:11,183 | INFO     | --------------------------------------------------
[2025-11-26 00:41:43] 2025-11-25 23:41:11,183 | INFO     | 
[2025-11-26 00:41:43] 2025-11-25 23:41:11,183 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-26 00:41:43] 2025-11-25 23:41:11,219 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,219 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,219 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,220 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,220 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,220 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,220 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,220 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,220 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,221 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:41:43] 2025-11-25 23:41:11,221 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,221 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:41:43] 2025-11-25 23:41:11,221 | INFO     | job 6893883500 has completed (purged errors)
[2025-11-26 00:41:43] 2025-11-25 23:41:11,222 | INFO     | overall cleanup function is called
[2025-11-26 00:41:43] 2025-11-25 23:41:12,238 | INFO     | --- collectZombieJob: --- 10, [17921]
[2025-11-26 00:41:43] 2025-11-25 23:41:12,239 | INFO     | zombie collector waiting for pid 17921
[2025-11-26 00:41:43] 2025-11-25 23:41:12,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:41:43] 2025-11-25 23:41:12,239 | INFO     | collected zombie processes
[2025-11-26 00:41:43] 2025-11-25 23:41:12,239 | INFO     | will attempt to kill all subprocesses of pid=17921
[2025-11-26 00:41:43] 2025-11-25 23:41:12,339 | INFO     | process IDs to be killed: [17921] (in reverse order)
[2025-11-26 00:41:43] 2025-11-25 23:41:12,407 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:41:43] 2025-11-25 23:41:12,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:41:43] 2025-11-25 23:41:12,412 | INFO     | did not find any defunct processes belonging to 17921
[2025-11-26 00:41:43] 2025-11-25 23:41:12,415 | INFO     | did not find any defunct processes belonging to 17921
[2025-11-26 00:41:43] 2025-11-25 23:41:12,417 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:41:43] 2025-11-25 23:41:12,417 | INFO     | ready for new job
[2025-11-26 00:41:43] 2025-11-25 23:41:12,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:41:43] 2025-11-25 23:41:12,424 | INFO     | ***************************************
[2025-11-26 00:41:43] 2025-11-25 23:41:12,424 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:41:43] 2025-11-25 23:41:12,424 | INFO     | ***************************************
[2025-11-26 00:41:43] 2025-11-25 23:41:12,424 | INFO     | 
[2025-11-26 00:41:43] 2025-11-25 23:41:12,425 | INFO     | pilot is running in a VM
[2025-11-26 00:41:43] 2025-11-25 23:41:12,425 | INFO     | architecture information:
[2025-11-26 00:41:43] 2025-11-25 23:41:12,425 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:41:43] 2025-11-25 23:41:12,446 | INFO     | cat /etc/os-release:
[2025-11-26 00:41:43] NAME="CentOS Linux"
[2025-11-26 00:41:43] VERSION="7 (Core)"
[2025-11-26 00:41:43] ID="centos"
[2025-11-26 00:41:43] ID_LIKE="rhel fedora"
[2025-11-26 00:41:43] VERSION_ID="7"
[2025-11-26 00:41:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:41:43] ANSI_COLOR="0;31"
[2025-11-26 00:41:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:41:43] HOME_URL="https://www.centos.org/"
[2025-11-26 00:41:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:41:43] 
[2025-11-26 00:41:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:41:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:41:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:41:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:41:43] 
[2025-11-26 00:41:43] 2025-11-25 23:41:12,446 | INFO     | ***************************************
[2025-11-26 00:41:43] 2025-11-25 23:41:12,950 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-26 00:41:43] 2025-11-25 23:41:12,975 | INFO     | sufficient remaining disk space (494724448256 B)
[2025-11-26 00:41:43] 2025-11-25 23:41:12,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:41:43] 2025-11-25 23:41:12,976 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:41:43] 2025-11-25 23:41:12,976 | INFO     | update_server=False
[2025-11-26 00:41:43] 2025-11-25 23:41:12,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:41:43] 2025-11-25 23:41:12,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:41:43] 2025-11-25 23:41:12,977 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:41:43] 2025-11-25 23:41:12,977 | INFO     | aborting loop
[2025-11-26 00:41:43] 2025-11-25 23:41:13,686 | INFO     | all data control threads have been joined
[2025-11-26 00:41:43] 2025-11-25 23:41:13,693 | INFO     | all payload control threads have been joined
[2025-11-26 00:41:43] 2025-11-25 23:41:13,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:41:43] 2025-11-25 23:41:13,986 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:13,987 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:13,987 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:14,200 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:14,206 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:14,214 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:14,316 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:14,401 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:14,580 | INFO     | all job control threads have been joined
[2025-11-26 00:41:43] 2025-11-25 23:41:14,665 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:14,692 | INFO     | [data] control thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:14,699 | INFO     | [payload] control thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:15,175 | INFO     | [job] validate thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:15,586 | INFO     | [job] control thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:15,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:41:43] 2025-11-25 23:41:15,931 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:19,739 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:23,673 | INFO     | job.realtimelogging is not enabled
[2025-11-26 00:41:43] 2025-11-25 23:41:24,674 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:41:43] 2025-11-25 23:41:36,339 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:41:43] 2025-11-25 23:41:37,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489935390528)>', '<ExcThread(monitor, started 140489495922432)>']
[2025-11-26 00:41:43] 2025-11-25 23:41:42,478 | INFO     | PID=11156 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 00:41:43] 2025-11-25 23:41:42,478 | INFO     | .. there are 9 such processes running
[2025-11-26 00:41:43] 2025-11-25 23:41:42,480 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:41:43] 2025-11-25 23:41:42,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:41:43] 2025-11-25 23:41:42,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:41:43] 2025-11-25 23:41:42,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:41:43] 2025-11-25 23:41:42,480 | INFO     | [monitor] control thread has ended
[2025-11-26 00:41:43] 2025-11-25 23:41:42,897 | INFO     | all workflow threads have been joined
[2025-11-26 00:41:43] 2025-11-25 23:41:42,898 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:41:43] 2025-11-25 23:41:42,898 | INFO     | traces error code: 0
[2025-11-26 00:41:43] 2025-11-25 23:41:42,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:41:43] 2025-11-25 23:41:43,112 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:41:43] 2025-11-25 23:41:43,127 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:41:43] 2025-11-25 23:41:43,132 [wrapper] pilotpid: 11156
[2025-11-26 00:41:43] 2025-11-25 23:41:43,140 [wrapper] Pilot exit status: 0
[2025-11-26 00:41:43] 2025-11-25 23:41:43,180 [wrapper] pandaids: 6893883500
[2025-11-26 00:41:43] 2025-11-25 23:41:43,229 [wrapper] cleanup supervisor_pilot 28356 11157
[2025-11-26 00:41:43] 2025-11-25 23:41:43,245 [wrapper] Test setup, not cleaning
[2025-11-26 00:41:43] 2025-11-25 23:41:43,250 [wrapper] apfmon messages muted
[2025-11-26 00:41:43] 2025-11-25 23:41:43,260 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:41:43] 2025-11-25 23:41:43,268 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:41:43]  *** Error codes and diagnostics ***
[2025-11-26 00:41:43]     "exeErrorCode": 0,
[2025-11-26 00:41:43]     "exeErrorDiag": "",
[2025-11-26 00:41:43]     "pilotErrorCode": 0,
[2025-11-26 00:41:43]     "pilotErrorDiag": "",
[2025-11-26 00:41:43]  *** Listing of results directory ***
[2025-11-26 00:41:43] total 1341572
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc    576529 Nov 20 22:12 pilot3.tar.gz
[2025-11-26 00:41:43] -rwx------. 1 boinc boinc     36292 Nov 20 22:23 runpilot2-wrapper.sh
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc      5112 Nov 20 22:23 queuedata.json
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc       100 Nov 24 22:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:41:43] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 22:47 run_atlas
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc       105 Nov 24 22:47 job.xml
[2025-11-26 00:41:43] -rw-r--r--. 2 boinc boinc 412005842 Nov 24 22:47 EVNT.47493127._000911.pool.root.1
[2025-11-26 00:41:43] -rw-r--r--. 2 boinc boinc    590098 Nov 24 22:47 input.tar.gz
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc      6392 Nov 24 22:47 init_data.xml
[2025-11-26 00:41:43] -rw-r--r--. 2 boinc boinc     15847 Nov 24 22:47 start_atlas.sh
[2025-11-26 00:41:43] drwxrwx--x. 2 boinc boinc        68 Nov 24 22:47 shared
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc         0 Nov 24 22:47 boinc_lockfile
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc      2785 Nov 24 22:48 pandaJob.out
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc    991801 Nov 24 22:51 agis_schedconf.cvmfs.json
[2025-11-26 00:41:43] drwx------. 5 boinc boinc      4096 Nov 24 22:51 pilot3
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc       533 Nov 26 00:13 boinc_task_state.xml
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc 927932526 Nov 26 00:40 HITS.47523449._009106.pool.root.1
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc      1031 Nov 26 00:40 memory_monitor_summary.json
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc   1516240 Nov 26 00:40 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc   2580952 Nov 26 00:40 log.47523449._009106.job.log.tgz.1
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc      8630 Nov 26 00:41 heartbeat.json
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc      8192 Nov 26 00:41 boinc_mmap_file
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc        29 Nov 26 00:41 wrapper_checkpoint.txt
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc        95 Nov 26 00:41 pilot_heartbeat.json
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc      4956 Nov 26 00:41 pilotlog.txt
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc  12386736 Nov 26 00:41 log.47523449._009106.job.log.1
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc       353 Nov 26 00:41 output.list
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc       620 Nov 26 00:41 runtime_log
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc  14991360 Nov 26 00:41 result.tar.gz
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc      8817 Nov 26 00:41 runtime_log.err
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc       662 Nov 26 00:41 5voMDmfIRg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5YIKDmdDJHVn.diag
[2025-11-26 00:41:43] -rw-r--r--. 1 boinc boinc      1839 Nov 26 00:41 stderr.txt
[2025-11-26 00:41:43] HITS file was successfully produced:
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc 927932526 Nov 26 00:40 shared/HITS.pool.root.1
[2025-11-26 00:41:43]  *** Contents of shared directory: ***
[2025-11-26 00:41:43] total 1323776
[2025-11-26 00:41:43] -rw-r--r--. 2 boinc boinc 412005842 Nov 24 22:47 ATLAS.root_0
[2025-11-26 00:41:43] -rw-r--r--. 2 boinc boinc    590098 Nov 24 22:47 input.tar.gz
[2025-11-26 00:41:43] -rw-r--r--. 2 boinc boinc     15847 Nov 24 22:47 start_atlas.sh
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc 927932526 Nov 26 00:40 HITS.pool.root.1
[2025-11-26 00:41:43] -rw-------. 1 boinc boinc  14991360 Nov 26 00:41 result.tar.gz
00:41:44 (7355): run_atlas exited; CPU time 345714.227937
00:41:44 (7355): called boinc_finish(0)

</stderr_txt>
]]>

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