Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:08:52 (30643): wrapper (7.7.26015): starting
23:08:52 (30643): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 23:08:52] Arguments: --nthreads 8
[2025-11-21 23:08:52] Threads: 8
[2025-11-21 23:08:52] Checking for CVMFS
[2025-11-21 23:08:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 23:08:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 23:08:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 23:08:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 23:08:53] 2.11.2.0 2951 18309 78972 153157 0 82 10281778 20275200 1 130560 0 2202802 99.419 1396482 29610 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 23:08:53] CVMFS is ok
[2025-11-21 23:08:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 23:08:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 23:08:53] Further information can be found at the LHC@home message board.
[2025-11-21 23:08:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 23:08:53] Checking for apptainer binary...
[2025-11-21 23:08:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 23:08:53] Running /usr/bin/apptainer --version
[2025-11-21 23:08:53] apptainer version 1.3.2-1.el7
[2025-11-21 23:08:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 23:08:54] c-204-23.aglt2.org
[2025-11-21 23:08:54] apptainer works
[2025-11-21 23:08:54] Set ATHENA_PROC_NUMBER=8
[2025-11-21 23:08:54] Set ATHENA_CORE_NUMBER=8
[2025-11-21 23:08:54] Starting ATLAS job with PandaID=6894286246
[2025-11-21 23:08:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 11:26:46]  *** The last 200 lines of the pilot log: ***
[2025-11-22 11:26:46] 2025-11-22 16:26:11,327 | INFO     | monitor loop #3241: job 0:6894286246 is in state 'finished'
[2025-11-22 11:26:46] 2025-11-22 16:26:11,327 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 11:26:46] 2025-11-22 16:26:12,772 | INFO     | time since job start (44220s) is within the limit (172800.0s)
[2025-11-22 11:26:46] 2025-11-22 16:26:13,203 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 11:26:46] 2025-11-22 16:26:13,207 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-22 11:26:46] 2025-11-22 16:26:13,209 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894286246/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 11:26:46] 2025-11-22 16:26:13,210 | INFO     | extracted standard info from prmon json
[2025-11-22 11:26:46] 2025-11-22 16:26:13,210 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 11:26:46] 2025-11-22 16:26:13,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 11:26:46] 2025-11-22 16:26:13,224 | INFO     | fitting pss+swap vs Time
[2025-11-22 11:26:46] 2025-11-22 16:26:13,225 | INFO     | sum of square deviations: 118165716829.38747
[2025-11-22 11:26:46] 2025-11-22 16:26:13,236 | INFO     | sum of deviations: 845923838352.7047
[2025-11-22 11:26:46] 2025-11-22 16:26:13,236 | INFO     | mean x: 1763806665.604138
[2025-11-22 11:26:46] 2025-11-22 16:26:13,236 | INFO     | mean y: 3314273.831724138
[2025-11-22 11:26:46] 2025-11-22 16:26:13,237 | INFO     | intersect: -12623411520.369781
[2025-11-22 11:26:46] 2025-11-22 16:26:13,237 | INFO     | chi2: 6.8104426795752335
[2025-11-22 11:26:46] 2025-11-22 16:26:13,238 | INFO     | sum of square deviations: 115737860707.55005
[2025-11-22 11:26:46] 2025-11-22 16:26:13,251 | INFO     | sum of deviations: 1128511309641.1577
[2025-11-22 11:26:46] 2025-11-22 16:26:13,251 | INFO     | mean x: 1763806513.1083333
[2025-11-22 11:26:46] 2025-11-22 16:26:13,252 | INFO     | mean y: 3332015.3569444446
[2025-11-22 11:26:46] 2025-11-22 16:26:13,252 | INFO     | intersect: -17194805101.511696
[2025-11-22 11:26:46] 2025-11-22 16:26:13,253 | INFO     | chi2: 3.569144590506096
[2025-11-22 11:26:46] 2025-11-22 16:26:13,253 | INFO     | current chi2=3.569144590506096 (change=47.593060268900125 %)
[2025-11-22 11:26:46] 2025-11-22 16:26:13,254 | INFO     | sum of square deviations: 113343493585.68695
[2025-11-22 11:26:46] 2025-11-22 16:26:13,267 | INFO     | sum of deviations: 1253388277969.8723
[2025-11-22 11:26:46] 2025-11-22 16:26:13,267 | INFO     | mean x: 1763806360.6125875
[2025-11-22 11:26:46] 2025-11-22 16:26:13,267 | INFO     | mean y: 3339960.4363636365
[2025-11-22 11:26:46] 2025-11-22 16:26:13,267 | INFO     | intersect: -19501389839.772396
[2025-11-22 11:26:46] 2025-11-22 16:26:13,268 | INFO     | chi2: 2.796743092890937
[2025-11-22 11:26:46] 2025-11-22 16:26:13,268 | INFO     | current chi2=2.796743092890937 (change=21.64108172220713 %)
[2025-11-22 11:26:46] 2025-11-22 16:26:13,268 | INFO     | right removable region: 714
[2025-11-22 11:26:46] 2025-11-22 16:26:13,269 | INFO     | sum of square deviations: 115737593527.55005
[2025-11-22 11:26:46] 2025-11-22 16:26:13,282 | INFO     | sum of deviations: 608031255789.2498
[2025-11-22 11:26:46] 2025-11-22 16:26:13,282 | INFO     | mean x: 1763806818.1083333
[2025-11-22 11:26:46] 2025-11-22 16:26:13,282 | INFO     | mean y: 3329189.9583333335
[2025-11-22 11:26:46] 2025-11-22 16:26:13,282 | INFO     | intersect: -9262887964.701668
[2025-11-22 11:26:46] 2025-11-22 16:26:13,283 | INFO     | chi2: 4.364879029148731
[2025-11-22 11:26:46] 2025-11-22 16:26:13,283 | INFO     | current chi2=4.364879029148731 (change=35.90902626287183 %)
[2025-11-22 11:26:46] 2025-11-22 16:26:13,284 | INFO     | sum of square deviations: 113343134662.56496
[2025-11-22 11:26:46] 2025-11-22 16:26:13,295 | INFO     | sum of deviations: 555935237721.8
[2025-11-22 11:26:46] 2025-11-22 16:26:13,295 | INFO     | mean x: 1763806970.606993
[2025-11-22 11:26:46] 2025-11-22 16:26:13,295 | INFO     | mean y: 3332507.8
[2025-11-22 11:26:46] 2025-11-22 16:26:13,295 | INFO     | intersect: -8647940905.61855
[2025-11-22 11:26:46] 2025-11-22 16:26:13,296 | INFO     | chi2: 4.312769497151376
[2025-11-22 11:26:46] 2025-11-22 16:26:13,296 | INFO     | current chi2=4.312769497151376 (change=1.1938367970650752 %)
[2025-11-22 11:26:46] 2025-11-22 16:26:13,297 | INFO     | left removable region: 20
[2025-11-22 11:26:46] 2025-11-22 16:26:13,297 | INFO     | sum of square deviations: 103646967221.54625
[2025-11-22 11:26:46] 2025-11-22 16:26:13,307 | INFO     | sum of deviations: 894777469720.0072
[2025-11-22 11:26:46] 2025-11-22 16:26:13,307 | INFO     | mean x: 1763806940.1167147
[2025-11-22 11:26:46] 2025-11-22 16:26:13,308 | INFO     | mean y: 3365676.2838616716
[2025-11-22 11:26:46] 2025-11-22 16:26:13,308 | INFO     | intersect: -15223463947.96144
[2025-11-22 11:26:46] 2025-11-22 16:26:13,309 | INFO     | chi2: 0.14072887514367516
[2025-11-22 11:26:46] 2025-11-22 16:26:13,309 | INFO     | current memory leak: 8.63 B/s (using 694 data points, chi2=0.14)
[2025-11-22 11:26:46] 2025-11-22 16:26:13,309 | INFO     | could have reported an average CPU frequency of 2158 MHz (28 samples)
[2025-11-22 11:26:46] 2025-11-22 16:26:13,309 | INFO     | ..............................
[2025-11-22 11:26:46] 2025-11-22 16:26:13,310 | INFO     | . Timing measurements:
[2025-11-22 11:26:46] 2025-11-22 16:26:13,310 | INFO     | . get job = 0 s
[2025-11-22 11:26:46] 2025-11-22 16:26:13,310 | INFO     | . initial setup = 2 s
[2025-11-22 11:26:46] 2025-11-22 16:26:13,310 | INFO     | . payload setup = 8 s
[2025-11-22 11:26:46] 2025-11-22 16:26:13,310 | INFO     | . stage-in = 0 s
[2025-11-22 11:26:46] 2025-11-22 16:26:13,310 | INFO     | . payload execution = 44181 s
[2025-11-22 11:26:46] 2025-11-22 16:26:13,310 | INFO     | . stage-out = 3 s
[2025-11-22 11:26:46] 2025-11-22 16:26:13,310 | INFO     | . log creation = 0 s
[2025-11-22 11:26:46] 2025-11-22 16:26:13,310 | INFO     | ..............................
[2025-11-22 11:26:46] 2025-11-22 16:26:13,406 | INFO     | 
[2025-11-22 11:26:46] 2025-11-22 16:26:13,406 | INFO     | job summary report
[2025-11-22 11:26:46] 2025-11-22 16:26:13,406 | INFO     | --------------------------------------------------
[2025-11-22 11:26:46] 2025-11-22 16:26:13,406 | INFO     | PanDA job id: 6894286246
[2025-11-22 11:26:46] 2025-11-22 16:26:13,406 | INFO     | task id: 47533967
[2025-11-22 11:26:46] 2025-11-22 16:26:13,407 | INFO     | errors: (none)
[2025-11-22 11:26:46] 2025-11-22 16:26:13,407 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 11:26:46] 2025-11-22 16:26:13,407 | INFO     | pilot state: finished 
[2025-11-22 11:26:46] 2025-11-22 16:26:13,407 | INFO     | transexitcode: 0
[2025-11-22 11:26:46] 2025-11-22 16:26:13,407 | INFO     | exeerrorcode: 0
[2025-11-22 11:26:46] 2025-11-22 16:26:13,407 | INFO     | exeerrordiag: 
[2025-11-22 11:26:46] 2025-11-22 16:26:13,407 | INFO     | exitcode: 0
[2025-11-22 11:26:46] 2025-11-22 16:26:13,407 | INFO     | exitmsg: OK
[2025-11-22 11:26:46] 2025-11-22 16:26:13,408 | INFO     | cpuconsumptiontime: 342629 s
[2025-11-22 11:26:46] 2025-11-22 16:26:13,408 | INFO     | nevents: 1000
[2025-11-22 11:26:46] 2025-11-22 16:26:13,408 | INFO     | neventsw: 0
[2025-11-22 11:26:46] 2025-11-22 16:26:13,408 | INFO     | pid: 8470
[2025-11-22 11:26:46] 2025-11-22 16:26:13,408 | INFO     | pgrp: 8470
[2025-11-22 11:26:46] 2025-11-22 16:26:13,408 | INFO     | corecount: 8
[2025-11-22 11:26:46] 2025-11-22 16:26:13,408 | INFO     | event service: False
[2025-11-22 11:26:46] 2025-11-22 16:26:13,408 | INFO     | sizes: {0: 2297978, 1: 2298834, 7: 2299096, 12: 2299124, 44194: 2344742, 44195: 2344741, 44199: 2353975, 44205: 2354165}
[2025-11-22 11:26:46] 2025-11-22 16:26:13,408 | INFO     | --------------------------------------------------
[2025-11-22 11:26:46] 2025-11-22 16:26:13,409 | INFO     | 
[2025-11-22 11:26:46] 2025-11-22 16:26:13,409 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 11:26:46] 2025-11-22 16:26:13,436 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,437 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,437 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,437 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,438 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,438 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,438 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,439 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,439 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,439 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,439 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,440 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 11:26:46] 2025-11-22 16:26:13,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,440 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 11:26:46] 2025-11-22 16:26:13,440 | INFO     | job 6894286246 has completed (purged errors)
[2025-11-22 11:26:46] 2025-11-22 16:26:13,441 | INFO     | overall cleanup function is called
[2025-11-22 11:26:46] 2025-11-22 16:26:14,457 | INFO     | --- collectZombieJob: --- 10, [8470]
[2025-11-22 11:26:46] 2025-11-22 16:26:14,457 | INFO     | zombie collector waiting for pid 8470
[2025-11-22 11:26:46] 2025-11-22 16:26:14,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 11:26:46] 2025-11-22 16:26:14,457 | INFO     | collected zombie processes
[2025-11-22 11:26:46] 2025-11-22 16:26:14,458 | INFO     | will attempt to kill all subprocesses of pid=8470
[2025-11-22 11:26:46] 2025-11-22 16:26:14,546 | INFO     | process IDs to be killed: [8470] (in reverse order)
[2025-11-22 11:26:46] 2025-11-22 16:26:14,603 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 11:26:46] 2025-11-22 16:26:14,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 11:26:46] 2025-11-22 16:26:14,608 | INFO     | did not find any defunct processes belonging to 8470
[2025-11-22 11:26:46] 2025-11-22 16:26:14,611 | INFO     | did not find any defunct processes belonging to 8470
[2025-11-22 11:26:46] 2025-11-22 16:26:14,613 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 11:26:46] 2025-11-22 16:26:14,613 | INFO     | ready for new job
[2025-11-22 11:26:46] 2025-11-22 16:26:14,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 11:26:46] 2025-11-22 16:26:14,617 | INFO     | ***************************************
[2025-11-22 11:26:46] 2025-11-22 16:26:14,617 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 11:26:46] 2025-11-22 16:26:14,617 | INFO     | ***************************************
[2025-11-22 11:26:46] 2025-11-22 16:26:14,617 | INFO     | 
[2025-11-22 11:26:46] 2025-11-22 16:26:14,618 | INFO     | architecture information:
[2025-11-22 11:26:46] 2025-11-22 16:26:14,618 | INFO     | executing command: cat /etc/os-release
[2025-11-22 11:26:46] 2025-11-22 16:26:14,637 | INFO     | cat /etc/os-release:
[2025-11-22 11:26:46] NAME="CentOS Linux"
[2025-11-22 11:26:46] VERSION="7 (Core)"
[2025-11-22 11:26:46] ID="centos"
[2025-11-22 11:26:46] ID_LIKE="rhel fedora"
[2025-11-22 11:26:46] VERSION_ID="7"
[2025-11-22 11:26:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 11:26:46] ANSI_COLOR="0;31"
[2025-11-22 11:26:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 11:26:46] HOME_URL="https://www.centos.org/"
[2025-11-22 11:26:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 11:26:46] 
[2025-11-22 11:26:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 11:26:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 11:26:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 11:26:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 11:26:46] 
[2025-11-22 11:26:46] 2025-11-22 16:26:14,637 | INFO     | ***************************************
[2025-11-22 11:26:46] 2025-11-22 16:26:15,140 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 11:26:46] 2025-11-22 16:26:15,163 | INFO     | sufficient remaining disk space (17440964608 B)
[2025-11-22 11:26:46] 2025-11-22 16:26:15,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 11:26:46] 2025-11-22 16:26:15,163 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 11:26:46] 2025-11-22 16:26:15,164 | INFO     | update_server=False
[2025-11-22 11:26:46] 2025-11-22 16:26:15,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 11:26:46] 2025-11-22 16:26:15,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:26:46] 2025-11-22 16:26:15,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:26:46] 2025-11-22 16:26:15,165 | INFO     | aborting loop
[2025-11-22 11:26:46] 2025-11-22 16:26:15,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 11:26:46] 2025-11-22 16:26:15,862 | INFO     | all job control threads have been joined
[2025-11-22 11:26:46] 2025-11-22 16:26:15,866 | INFO     | all payload control threads have been joined
[2025-11-22 11:26:46] 2025-11-22 16:26:16,170 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:16,170 | INFO     | [job] retrieve thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:16,171 | INFO     | [job] queue monitor thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:16,171 | INFO     | [job] job monitor thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:16,244 | INFO     | all data control threads have been joined
[2025-11-22 11:26:46] 2025-11-22 16:26:16,250 | INFO     | [payload] failed_post thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:16,759 | INFO     | [job] validate thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:16,759 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:16,760 | INFO     | [data] copytool_in thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:16,868 | INFO     | [job] control thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:16,872 | INFO     | [payload] control thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:17,048 | INFO     | [payload] validate_post thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:17,250 | INFO     | [data] control thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:17,267 | INFO     | [data] copytool_out thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:17,638 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:17,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 11:26:46] 2025-11-22 16:26:21,861 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:24,836 | INFO     | [monitor] cgroup control has ended
[2025-11-22 11:26:46] 2025-11-22 16:26:25,813 | INFO     | job.realtimelogging is not enabled
[2025-11-22 11:26:46] 2025-11-22 16:26:26,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 11:26:46] 2025-11-22 16:26:28,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140238095853376)>', '<ExcThread(monitor, started 140237510530816)>']
[2025-11-22 11:26:46] 2025-11-22 16:26:33,049 | INFO     | all workflow threads have been joined
[2025-11-22 11:26:46] 2025-11-22 16:26:33,049 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 11:26:46] 2025-11-22 16:26:33,050 | INFO     | traces error code: 0
[2025-11-22 11:26:46] 2025-11-22 16:26:33,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 11:26:46] 2025-11-22 16:26:45,989 | INFO     | PID=1977 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 11:26:46] 2025-11-22 16:26:45,990 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 11:26:46] 2025-11-22 16:26:45,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 11:26:46] 2025-11-22 16:26:45,990 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 11:26:46] 2025-11-22 16:26:45,990 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 11:26:46] 2025-11-22 16:26:45,990 | INFO     | [monitor] control thread has ended
[2025-11-22 11:26:46] 2025-11-22 16:26:46,105 [wrapper] ==== pilot stdout END ====
[2025-11-22 11:26:46] 2025-11-22 16:26:46,110 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 11:26:46] 2025-11-22 16:26:46,115 [wrapper] pilotpid: 1977
[2025-11-22 11:26:46] 2025-11-22 16:26:46,120 [wrapper] Pilot exit status: 0
[2025-11-22 11:26:46] 2025-11-22 16:26:46,138 [wrapper] pandaids: 6894286246
[2025-11-22 11:26:46] 2025-11-22 16:26:46,186 [wrapper] cleanup supervisor_pilot 15448 1978
[2025-11-22 11:26:46] 2025-11-22 16:26:46,191 [wrapper] Test setup, not cleaning
[2025-11-22 11:26:46] 2025-11-22 16:26:46,196 [wrapper] apfmon messages muted
[2025-11-22 11:26:46] 2025-11-22 16:26:46,201 [wrapper] ==== wrapper stdout END ====
[2025-11-22 11:26:46] 2025-11-22 16:26:46,206 [wrapper] ==== wrapper stderr END ====
[2025-11-22 11:26:46]  *** Error codes and diagnostics ***
[2025-11-22 11:26:46]     "exeErrorCode": 0,
[2025-11-22 11:26:46]     "exeErrorDiag": "",
[2025-11-22 11:26:46]     "pilotErrorCode": 0,
[2025-11-22 11:26:46]     "pilotErrorDiag": "",
[2025-11-22 11:26:46]  *** Listing of results directory ***
[2025-11-22 11:26:46] total 1313204
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 05:18 pilot3.tar.gz
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 05:21 queuedata.json
[2025-11-22 11:26:46] -rwx------ 1 boincer umatlas     36292 Nov 21 05:23 runpilot2-wrapper.sh
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas       100 Nov 21 23:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 11:26:46] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 23:08 run_atlas
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas       105 Nov 21 23:08 job.xml
[2025-11-22 11:26:46] -rw-r--r-- 2 boincer umatlas 409458030 Nov 21 23:08 EVNT.47493127._002369.pool.root.1
[2025-11-22 11:26:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 23:08 start_atlas.sh
[2025-11-22 11:26:46] drwxrwx--x 2 boincer umatlas      4096 Nov 21 23:08 shared
[2025-11-22 11:26:46] -rw-r--r-- 2 boincer umatlas    590106 Nov 21 23:08 input.tar.gz
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas         0 Nov 21 23:08 boinc_lockfile
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas      2785 Nov 21 23:08 pandaJob.out
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas        57 Nov 21 23:08 setup.sh.local
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas    989752 Nov 21 23:09 agis_schedconf.cvmfs.json
[2025-11-22 11:26:46] drwx------ 5 boincer umatlas      4096 Nov 21 23:09 pilot3
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas       533 Nov 22 11:14 boinc_task_state.xml
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas      5912 Nov 22 11:22 init_data.xml
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas 915185772 Nov 22 11:25 HITS.47533967._003407.pool.root.1
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas      1063 Nov 22 11:26 memory_monitor_summary.json
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas   1526164 Nov 22 11:26 agis_ddmendpoints.agis.ALL.json
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas   1985153 Nov 22 11:26 log.47533967._003407.job.log.tgz.1
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas      8672 Nov 22 11:26 heartbeat.json
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 11:26 boinc_mmap_file
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas        29 Nov 22 11:26 wrapper_checkpoint.txt
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas        95 Nov 22 11:26 pilot_heartbeat.json
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas       744 Nov 22 11:26 pilotlog.txt
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas   6090462 Nov 22 11:26 log.47533967._003407.job.log.1
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas       353 Nov 22 11:26 output.list
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas       620 Nov 22 11:26 runtime_log
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas   8099840 Nov 22 11:26 result.tar.gz
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 11:26 runtime_log.err
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas       668 Nov 22 11:26 CtNNDmMTdg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgHJKDm3tKCGm.diag
[2025-11-22 11:26:46] -rw-r--r-- 1 boincer umatlas     21266 Nov 22 11:26 stderr.txt
[2025-11-22 11:26:46] HITS file was successfully produced:
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas 915185772 Nov 22 11:25 shared/HITS.pool.root.1
[2025-11-22 11:26:46]  *** Contents of shared directory: ***
[2025-11-22 11:26:46] total 1302116
[2025-11-22 11:26:46] -rw-r--r-- 2 boincer umatlas 409458030 Nov 21 23:08 ATLAS.root_0
[2025-11-22 11:26:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 23:08 start_atlas.sh
[2025-11-22 11:26:46] -rw-r--r-- 2 boincer umatlas    590106 Nov 21 23:08 input.tar.gz
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas 915185772 Nov 22 11:25 HITS.pool.root.1
[2025-11-22 11:26:46] -rw------- 1 boincer umatlas   8099840 Nov 22 11:26 result.tar.gz
11:26:47 (30643): run_atlas exited; CPU time 340488.212800
11:26:47 (30643): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN