Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:29:27 (4991): wrapper (7.7.26015): starting
16:29:27 (4991): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 16:29:27] Arguments: --nthreads 8
[2025-11-24 16:29:27] Threads: 8
[2025-11-24 16:29:27] Checking for CVMFS
[2025-11-24 16:29:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 16:29:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 16:29:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 16:29:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 16:29:30] 2.11.2.0 27391 85023 90700 153250 3 86 24004882 25165825 1060 130560 14 24249931 99.865 16607432 1457 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 16:29:30] CVMFS is ok
[2025-11-24 16:29:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 16:29:30] Checking for apptainer binary...
[2025-11-24 16:29:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 16:29:30] Running /usr/bin/apptainer --version
[2025-11-24 16:29:30] apptainer version 1.3.2-1.el7
[2025-11-24 16:29:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 16:29:39] cg-vwn417.simple-grid.lan
[2025-11-24 16:29:39] apptainer works
[2025-11-24 16:29:39] Set ATHENA_PROC_NUMBER=8
[2025-11-24 16:29:39] Set ATHENA_CORE_NUMBER=8
[2025-11-24 16:29:39] Starting ATLAS job with PandaID=6893827722
[2025-11-24 16:29:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 16:23:23]  *** The last 200 lines of the pilot log: ***
[2025-11-25 16:23:23] 2025-11-25 15:22:21,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 16:23:23] 2025-11-25 15:22:22,796 | INFO     | time since job start (85716s) is within the limit (172800.0s)
[2025-11-25 16:23:23] 2025-11-25 15:22:23,962 | INFO     | monitor loop #5809: job 0:6893827722 is in state 'finished'
[2025-11-25 16:23:23] 2025-11-25 15:22:23,962 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 16:23:23] 2025-11-25 15:22:24,802 | INFO     | time since job start (85718s) is within the limit (172800.0s)
[2025-11-25 16:23:23] 2025-11-25 15:22:26,466 | INFO     | monitor loop #5810: job 0:6893827722 is in state 'finished'
[2025-11-25 16:23:23] 2025-11-25 15:22:26,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 16:23:23] 2025-11-25 15:22:26,813 | INFO     | time since job start (85720s) is within the limit (172800.0s)
[2025-11-25 16:23:23] 2025-11-25 15:22:28,820 | INFO     | time since job start (85722s) is within the limit (172800.0s)
[2025-11-25 16:23:23] 2025-11-25 15:22:28,970 | INFO     | monitor loop #5811: job 0:6893827722 is in state 'finished'
[2025-11-25 16:23:23] 2025-11-25 15:22:28,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 16:23:23] 2025-11-25 15:22:30,827 | INFO     | time since job start (85724s) is within the limit (172800.0s)
[2025-11-25 16:23:23] 2025-11-25 15:22:31,479 | INFO     | monitor loop #5812: job 0:6893827722 is in state 'finished'
[2025-11-25 16:23:23] 2025-11-25 15:22:31,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 16:23:23] 2025-11-25 15:22:32,596 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 16:23:23] 2025-11-25 15:22:32,598 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 16:23:23] 2025-11-25 15:22:32,601 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6893827722/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 16:23:23] 2025-11-25 15:22:32,602 | INFO     | extracted standard info from prmon json
[2025-11-25 16:23:23] 2025-11-25 15:22:32,602 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 16:23:23] 2025-11-25 15:22:32,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 16:23:23] 2025-11-25 15:22:32,645 | INFO     | fitting pss+swap vs Time
[2025-11-25 16:23:23] 2025-11-25 15:22:32,664 | INFO     | sum of square deviations: 841788783661.4589
[2025-11-25 16:23:23] 2025-11-25 15:22:32,767 | INFO     | sum of deviations: 4008808067617.54
[2025-11-25 16:23:23] 2025-11-25 15:22:32,767 | INFO     | mean x: 1764041522.2100358
[2025-11-25 16:23:23] 2025-11-25 15:22:32,767 | INFO     | mean y: 2825263.3326164875
[2025-11-25 16:23:23] 2025-11-25 15:22:32,768 | INFO     | intersect: -8397980286.830112
[2025-11-25 16:23:23] 2025-11-25 15:22:32,769 | INFO     | chi2: 26.663556722571947
[2025-11-25 16:23:23] 2025-11-25 15:22:32,771 | INFO     | sum of square deviations: 832770254971.6119
[2025-11-25 16:23:23] 2025-11-25 15:22:32,845 | INFO     | time since job start (85726s) is within the limit (172800.0s)
[2025-11-25 16:23:23] 2025-11-25 15:22:32,848 | INFO     | sum of deviations: 4478622878908.845
[2025-11-25 16:23:23] 2025-11-25 15:22:32,849 | INFO     | mean x: 1764041369.7143884
[2025-11-25 16:23:23] 2025-11-25 15:22:32,849 | INFO     | mean y: 2833206.077697842
[2025-11-25 16:23:23] 2025-11-25 15:22:32,849 | INFO     | intersect: -9484148336.045073
[2025-11-25 16:23:23] 2025-11-25 15:22:32,851 | INFO     | chi2: 23.33143104298491
[2025-11-25 16:23:23] 2025-11-25 15:22:32,851 | INFO     | current chi2=23.33143104298491 (change=12.496928726564963 %)
[2025-11-25 16:23:23] 2025-11-25 15:22:32,851 | INFO     | right removable region: 1389
[2025-11-25 16:23:23] 2025-11-25 15:22:32,853 | INFO     | sum of square deviations: 832769225291.6125
[2025-11-25 16:23:23] 2025-11-25 15:22:32,930 | INFO     | sum of deviations: 3424444571510.6685
[2025-11-25 16:23:23] 2025-11-25 15:22:32,931 | INFO     | mean x: 1764041674.7143884
[2025-11-25 16:23:23] 2025-11-25 15:22:32,931 | INFO     | mean y: 2835143.286330935
[2025-11-25 16:23:23] 2025-11-25 15:22:32,931 | INFO     | intersect: -7251110792.070411
[2025-11-25 16:23:23] 2025-11-25 15:22:32,933 | INFO     | chi2: 21.832917955313874
[2025-11-25 16:23:23] 2025-11-25 15:22:32,933 | INFO     | current chi2=21.832917955313874 (change=18.11700823532185 %)
[2025-11-25 16:23:23] 2025-11-25 15:22:32,933 | INFO     | left removable region: 10
[2025-11-25 16:23:23] 2025-11-25 15:22:32,938 | INFO     | sum of square deviations: 813154681405.7675
[2025-11-25 16:23:23] 2025-11-25 15:22:33,010 | INFO     | sum of deviations: 3468161364547.844
[2025-11-25 16:23:23] 2025-11-25 15:22:33,010 | INFO     | mean x: 1764041644.2240753
[2025-11-25 16:23:23] 2025-11-25 15:22:33,010 | INFO     | mean y: 2853682.5409717187
[2025-11-25 16:23:23] 2025-11-25 15:22:33,010 | INFO     | intersect: -7520906821.88696
[2025-11-25 16:23:23] 2025-11-25 15:22:33,012 | INFO     | chi2: 14.080415510552788
[2025-11-25 16:23:23] 2025-11-25 15:22:33,012 | INFO     | current memory leak: 4.27 B/s (using 1379 data points, chi2=14.08)
[2025-11-25 16:23:23] 2025-11-25 15:22:33,015 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-25 16:23:23] 2025-11-25 15:22:33,015 | INFO     | ..............................
[2025-11-25 16:23:23] 2025-11-25 15:22:33,016 | INFO     | . Timing measurements:
[2025-11-25 16:23:23] 2025-11-25 15:22:33,016 | INFO     | . get job = 0 s
[2025-11-25 16:23:23] 2025-11-25 15:22:33,016 | INFO     | . initial setup = 13 s
[2025-11-25 16:23:23] 2025-11-25 15:22:33,016 | INFO     | . payload setup = 204 s
[2025-11-25 16:23:23] 2025-11-25 15:22:33,016 | INFO     | . stage-in = 0 s
[2025-11-25 16:23:23] 2025-11-25 15:22:33,016 | INFO     | . payload execution = 85198 s
[2025-11-25 16:23:23] 2025-11-25 15:22:33,016 | INFO     | . stage-out = 6 s
[2025-11-25 16:23:23] 2025-11-25 15:22:33,016 | INFO     | . log creation = 2 s
[2025-11-25 16:23:23] 2025-11-25 15:22:33,016 | INFO     | ..............................
[2025-11-25 16:23:23] 2025-11-25 15:22:33,162 | INFO     | 
[2025-11-25 16:23:23] 2025-11-25 15:22:33,162 | INFO     | job summary report
[2025-11-25 16:23:23] 2025-11-25 15:22:33,162 | INFO     | --------------------------------------------------
[2025-11-25 16:23:23] 2025-11-25 15:22:33,162 | INFO     | PanDA job id: 6893827722
[2025-11-25 16:23:23] 2025-11-25 15:22:33,162 | INFO     | task id: 47523449
[2025-11-25 16:23:23] 2025-11-25 15:22:33,163 | INFO     | errors: (none)
[2025-11-25 16:23:23] 2025-11-25 15:22:33,163 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 16:23:23] 2025-11-25 15:22:33,163 | INFO     | pilot state: finished 
[2025-11-25 16:23:23] 2025-11-25 15:22:33,163 | INFO     | transexitcode: 0
[2025-11-25 16:23:23] 2025-11-25 15:22:33,163 | INFO     | exeerrorcode: 0
[2025-11-25 16:23:23] 2025-11-25 15:22:33,163 | INFO     | exeerrordiag: 
[2025-11-25 16:23:23] 2025-11-25 15:22:33,163 | INFO     | exitcode: 0
[2025-11-25 16:23:23] 2025-11-25 15:22:33,163 | INFO     | exitmsg: OK
[2025-11-25 16:23:23] 2025-11-25 15:22:33,163 | INFO     | cpuconsumptiontime: 340055 s
[2025-11-25 16:23:23] 2025-11-25 15:22:33,163 | INFO     | nevents: 1000
[2025-11-25 16:23:23] 2025-11-25 15:22:33,164 | INFO     | neventsw: 0
[2025-11-25 16:23:23] 2025-11-25 15:22:33,164 | INFO     | pid: 15176
[2025-11-25 16:23:23] 2025-11-25 15:22:33,164 | INFO     | pgrp: 15176
[2025-11-25 16:23:23] 2025-11-25 15:22:33,164 | INFO     | corecount: 8
[2025-11-25 16:23:23] 2025-11-25 15:22:33,164 | INFO     | event service: False
[2025-11-25 16:23:23] 2025-11-25 15:22:33,164 | INFO     | sizes: {0: 2283474, 1: 2284159, 2: 2284358, 13: 2284358, 24: 2284414, 35: 2284442, 45: 2284598, 56: 2284626, 67: 2284654, 78: 2284682, 88: 2284738, 99: 2285046, 10
[2025-11-25 16:23:23] 2025-11-25 15:22:33,164 | INFO     | --------------------------------------------------
[2025-11-25 16:23:23] 2025-11-25 15:22:33,164 | INFO     | 
[2025-11-25 16:23:23] 2025-11-25 15:22:33,164 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-25 16:23:23] 2025-11-25 15:22:33,427 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,428 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,428 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,428 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,429 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,429 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,429 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,429 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,430 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 16:23:23] 2025-11-25 15:22:33,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,430 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 16:23:23] 2025-11-25 15:22:33,430 | INFO     | job 6893827722 has completed (purged errors)
[2025-11-25 16:23:23] 2025-11-25 15:22:33,430 | INFO     | overall cleanup function is called
[2025-11-25 16:23:23] 2025-11-25 15:22:34,450 | INFO     | --- collectZombieJob: --- 10, [15176]
[2025-11-25 16:23:23] 2025-11-25 15:22:34,450 | INFO     | zombie collector waiting for pid 15176
[2025-11-25 16:23:23] 2025-11-25 15:22:34,450 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 16:23:23] 2025-11-25 15:22:34,450 | INFO     | collected zombie processes
[2025-11-25 16:23:23] 2025-11-25 15:22:34,451 | INFO     | will attempt to kill all subprocesses of pid=15176
[2025-11-25 16:23:23] 2025-11-25 15:22:34,571 | INFO     | process IDs to be killed: [15176] (in reverse order)
[2025-11-25 16:23:23] 2025-11-25 15:22:34,653 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 16:23:23] 2025-11-25 15:22:34,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 16:23:23] 2025-11-25 15:22:34,658 | INFO     | did not find any defunct processes belonging to 15176
[2025-11-25 16:23:23] 2025-11-25 15:22:34,662 | INFO     | did not find any defunct processes belonging to 15176
[2025-11-25 16:23:23] 2025-11-25 15:22:34,664 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 16:23:23] 2025-11-25 15:22:34,665 | INFO     | ready for new job
[2025-11-25 16:23:23] 2025-11-25 15:22:34,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 16:23:23] 2025-11-25 15:22:34,672 | INFO     | ***************************************
[2025-11-25 16:23:23] 2025-11-25 15:22:34,673 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 16:23:23] 2025-11-25 15:22:34,673 | INFO     | ***************************************
[2025-11-25 16:23:23] 2025-11-25 15:22:34,673 | INFO     | 
[2025-11-25 16:23:23] 2025-11-25 15:22:34,674 | INFO     | pilot is running in a VM
[2025-11-25 16:23:23] 2025-11-25 15:22:34,674 | INFO     | architecture information:
[2025-11-25 16:23:23] 2025-11-25 15:22:34,674 | INFO     | executing command: cat /etc/os-release
[2025-11-25 16:23:23] 2025-11-25 15:22:34,747 | INFO     | cat /etc/os-release:
[2025-11-25 16:23:23] NAME="CentOS Linux"
[2025-11-25 16:23:23] VERSION="7 (Core)"
[2025-11-25 16:23:23] ID="centos"
[2025-11-25 16:23:23] ID_LIKE="rhel fedora"
[2025-11-25 16:23:23] VERSION_ID="7"
[2025-11-25 16:23:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 16:23:23] ANSI_COLOR="0;31"
[2025-11-25 16:23:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 16:23:23] HOME_URL="https://www.centos.org/"
[2025-11-25 16:23:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 16:23:23] 
[2025-11-25 16:23:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 16:23:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 16:23:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 16:23:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 16:23:23] 
[2025-11-25 16:23:23] 2025-11-25 15:22:34,748 | INFO     | ***************************************
[2025-11-25 16:23:23] 2025-11-25 15:22:35,251 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-25 16:23:23] 2025-11-25 15:22:35,431 | INFO     | sufficient remaining disk space (495468937216 B)
[2025-11-25 16:23:23] 2025-11-25 15:22:35,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 16:23:23] 2025-11-25 15:22:35,431 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 16:23:23] 2025-11-25 15:22:35,431 | INFO     | update_server=False
[2025-11-25 16:23:23] 2025-11-25 15:22:35,432 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 16:23:23] 2025-11-25 15:22:35,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 16:23:23] 2025-11-25 15:22:35,433 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:23:23] 2025-11-25 15:22:35,433 | INFO     | aborting loop
[2025-11-25 16:23:23] 2025-11-25 15:22:35,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 16:23:23] 2025-11-25 15:22:35,619 | INFO     | all payload control threads have been joined
[2025-11-25 16:23:23] 2025-11-25 15:22:35,851 | INFO     | all data control threads have been joined
[2025-11-25 16:23:23] 2025-11-25 15:22:36,172 | INFO     | all job control threads have been joined
[2025-11-25 16:23:23] 2025-11-25 15:22:36,438 | INFO     | [job] retrieve thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:36,439 | INFO     | [job] job monitor thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:36,625 | INFO     | [payload] control thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:36,680 | INFO     | [payload] failed_post thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:36,724 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:36,752 | INFO     | [job] validate thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:36,756 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:36,857 | INFO     | [data] control thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:37,178 | INFO     | [job] control thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:37,246 | INFO     | [data] copytool_in thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:37,552 | INFO     | [data] copytool_out thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:37,829 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:37,947 | INFO     | [payload] validate_post thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:38,176 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:23:23] 2025-11-25 15:22:39,182 | INFO     | [job] queue monitor thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:39,441 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:22:46,167 | INFO     | job.realtimelogging is not enabled
[2025-11-25 16:23:23] 2025-11-25 15:22:47,173 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 16:23:23] 2025-11-25 15:23:06,058 | INFO     | PID=8725 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 16:23:23] 2025-11-25 15:23:06,059 | INFO     | .. there are 9 such processes running
[2025-11-25 16:23:23] 2025-11-25 15:23:06,060 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 16:23:23] 2025-11-25 15:23:06,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 16:23:23] 2025-11-25 15:23:06,061 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 16:23:23] 2025-11-25 15:23:15,019 | INFO     | [monitor] cgroup control has ended
[2025-11-25 16:23:23] 2025-11-25 15:23:15,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139968855906112)>', '<ExcThread(monitor, started 139968135550720)>']
[2025-11-25 16:23:23] 2025-11-25 15:23:16,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 16:23:23] 2025-11-25 15:23:16,124 | INFO     | [monitor] control thread has ended
[2025-11-25 16:23:23] 2025-11-25 15:23:20,153 | INFO     | all workflow threads have been joined
[2025-11-25 16:23:23] 2025-11-25 15:23:20,153 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 16:23:23] 2025-11-25 15:23:20,154 | INFO     | traces error code: 0
[2025-11-25 16:23:23] 2025-11-25 15:23:20,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 16:23:23] 2025-11-25 15:23:20,613 [wrapper] ==== pilot stdout END ====
[2025-11-25 16:23:23] 2025-11-25 15:23:20,685 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 16:23:23] 2025-11-25 15:23:20,702 [wrapper] pilotpid: 8725
[2025-11-25 16:23:23] 2025-11-25 15:23:20,791 [wrapper] Pilot exit status: 0
[2025-11-25 16:23:23] 2025-11-25 15:23:21,266 [wrapper] pandaids: 6893827722
[2025-11-25 16:23:23] 2025-11-25 15:23:22,094 [wrapper] cleanup supervisor_pilot  7734 8726
[2025-11-25 16:23:23] 2025-11-25 15:23:22,162 [wrapper] Test setup, not cleaning
[2025-11-25 16:23:23] 2025-11-25 15:23:22,249 [wrapper] apfmon messages muted
[2025-11-25 16:23:23] 2025-11-25 15:23:22,336 [wrapper] ==== wrapper stdout END ====
[2025-11-25 16:23:23] 2025-11-25 15:23:22,416 [wrapper] ==== wrapper stderr END ====
[2025-11-25 16:23:23]  *** Error codes and diagnostics ***
[2025-11-25 16:23:23]     "exeErrorCode": 0,
[2025-11-25 16:23:23]     "exeErrorDiag": "",
[2025-11-25 16:23:23]     "pilotErrorCode": 0,
[2025-11-25 16:23:23]     "pilotErrorDiag": "",
[2025-11-25 16:23:23]  *** Listing of results directory ***
[2025-11-25 16:23:23] total 1340068
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:08 queuedata.json
[2025-11-25 16:23:23] -rwx------. 1 boinc boinc     36292 Nov 20 11:09 runpilot2-wrapper.sh
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc       100 Nov 24 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 16:23:23] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 16:29 run_atlas
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc       105 Nov 24 16:29 job.xml
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc      6391 Nov 24 16:29 init_data.xml
[2025-11-25 16:23:23] -rw-r--r--. 2 boinc boinc 413080316 Nov 24 16:29 EVNT.47493127._000002.pool.root.1
[2025-11-25 16:23:23] -rw-r--r--. 2 boinc boinc     15847 Nov 24 16:29 start_atlas.sh
[2025-11-25 16:23:23] drwxrwx--x. 2 boinc boinc        68 Nov 24 16:29 shared
[2025-11-25 16:23:23] -rw-r--r--. 2 boinc boinc    590090 Nov 24 16:29 input.tar.gz
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc         0 Nov 24 16:29 boinc_lockfile
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc      2782 Nov 24 16:29 pandaJob.out
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc    987541 Nov 24 16:33 agis_schedconf.cvmfs.json
[2025-11-25 16:23:23] drwx------. 5 boinc boinc      4096 Nov 24 16:33 pilot3
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc       533 Nov 25 15:57 boinc_task_state.xml
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc 927357208 Nov 25 16:19 HITS.47523449._000012.pool.root.1
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc      1033 Nov 25 16:20 memory_monitor_summary.json
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc   1516240 Nov 25 16:20 agis_ddmendpoints.agis.ALL.json
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc   2488519 Nov 25 16:20 log.47523449._000012.job.log.tgz.1
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc      8623 Nov 25 16:22 heartbeat.json
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc      8192 Nov 25 16:23 boinc_mmap_file
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc        29 Nov 25 16:23 wrapper_checkpoint.txt
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc        95 Nov 25 16:23 pilot_heartbeat.json
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc      4955 Nov 25 16:23 pilotlog.txt
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc  11457819 Nov 25 16:23 log.47523449._000012.job.log.1
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc       353 Nov 25 16:23 output.list
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc       620 Nov 25 16:23 runtime_log
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc  13967360 Nov 25 16:23 result.tar.gz
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc      8817 Nov 25 16:23 runtime_log.err
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc       662 Nov 25 16:23 8uaNDmjmGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDml8GKDmLKXnUn.diag
[2025-11-25 16:23:23] -rw-r--r--. 1 boinc boinc     21409 Nov 25 16:23 stderr.txt
[2025-11-25 16:23:23] HITS file was successfully produced:
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc 927357208 Nov 25 16:19 shared/HITS.pool.root.1
[2025-11-25 16:23:23]  *** Contents of shared directory: ***
[2025-11-25 16:23:23] total 1323260
[2025-11-25 16:23:23] -rw-r--r--. 2 boinc boinc 413080316 Nov 24 16:29 ATLAS.root_0
[2025-11-25 16:23:23] -rw-r--r--. 2 boinc boinc     15847 Nov 24 16:29 start_atlas.sh
[2025-11-25 16:23:23] -rw-r--r--. 2 boinc boinc    590090 Nov 24 16:29 input.tar.gz
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc 927357208 Nov 25 16:19 HITS.pool.root.1
[2025-11-25 16:23:23] -rw-------. 1 boinc boinc  13967360 Nov 25 16:23 result.tar.gz
16:23:25 (4991): run_atlas exited; CPU time 340297.426766
16:23:25 (4991): called boinc_finish(0)

</stderr_txt>
]]>

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