Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:43:55 (7169): wrapper (7.7.26015): starting
14:43:55 (7169): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 14:43:55] Arguments: --nthreads 8
[2025-11-24 14:43:55] Threads: 8
[2025-11-24 14:43:55] Checking for CVMFS
[2025-11-24 14:43:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 14:43:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 14:43:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 14:43:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 14:43:58] 2.11.2.0 20606 78680 97740 153247 1 87 13724998 25165824 1060 130560 12 25294591 99.892 14738666 1530 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 14:43:58] CVMFS is ok
[2025-11-24 14:43:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 14:43:58] Checking for apptainer binary...
[2025-11-24 14:43:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 14:43:58] Running /usr/bin/apptainer --version
[2025-11-24 14:43:58] apptainer version 1.3.2-1.el7
[2025-11-24 14:43:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 14:44:16] cg-vwn476.simple-grid.lan
[2025-11-24 14:44:16] apptainer works
[2025-11-24 14:44:16] Set ATHENA_PROC_NUMBER=8
[2025-11-24 14:44:16] Set ATHENA_CORE_NUMBER=8
[2025-11-24 14:44:17] Starting ATLAS job with PandaID=6894265640
[2025-11-24 14:44:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 14:15:05]  *** The last 200 lines of the pilot log: ***
[2025-11-25 14:15:05] 2025-11-25 13:14:15,545 | INFO     | monitor loop #5715: job 0:6894265640 is in state 'finished'
[2025-11-25 14:15:05] 2025-11-25 13:14:15,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 14:15:05] 2025-11-25 13:14:17,048 | INFO     | time since job start (84353s) is within the limit (172800.0s)
[2025-11-25 14:15:05] 2025-11-25 13:14:18,051 | INFO     | monitor loop #5716: job 0:6894265640 is in state 'finished'
[2025-11-25 14:15:05] 2025-11-25 13:14:18,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 14:15:05] 2025-11-25 13:14:19,058 | INFO     | time since job start (84355s) is within the limit (172800.0s)
[2025-11-25 14:15:05] 2025-11-25 13:14:20,565 | INFO     | monitor loop #5717: job 0:6894265640 is in state 'finished'
[2025-11-25 14:15:05] 2025-11-25 13:14:20,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 14:15:05] 2025-11-25 13:14:21,068 | INFO     | time since job start (84357s) is within the limit (172800.0s)
[2025-11-25 14:15:05] 2025-11-25 13:14:23,069 | INFO     | monitor loop #5718: job 0:6894265640 is in state 'finished'
[2025-11-25 14:15:05] 2025-11-25 13:14:23,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 14:15:05] 2025-11-25 13:14:23,076 | INFO     | time since job start (84359s) is within the limit (172800.0s)
[2025-11-25 14:15:05] 2025-11-25 13:14:25,082 | INFO     | time since job start (84361s) is within the limit (172800.0s)
[2025-11-25 14:15:05] 2025-11-25 13:14:25,574 | INFO     | monitor loop #5719: job 0:6894265640 is in state 'finished'
[2025-11-25 14:15:05] 2025-11-25 13:14:25,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 14:15:05] 2025-11-25 13:14:26,815 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 14:15:05] 2025-11-25 13:14:26,816 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-25 14:15:05] 2025-11-25 13:14:26,817 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6894265640/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 14:15:05] 2025-11-25 13:14:26,818 | INFO     | extracted standard info from prmon json
[2025-11-25 14:15:05] 2025-11-25 13:14:26,818 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 14:15:05] 2025-11-25 13:14:26,819 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 14:15:05] 2025-11-25 13:14:26,844 | INFO     | fitting pss+swap vs Time
[2025-11-25 14:15:05] 2025-11-25 13:14:26,846 | INFO     | sum of square deviations: 800832646516.9646
[2025-11-25 14:15:05] 2025-11-25 13:14:26,907 | INFO     | sum of deviations: 3890393057940.538
[2025-11-25 14:15:05] 2025-11-25 13:14:26,908 | INFO     | mean x: 1764034494.5765307
[2025-11-25 14:15:05] 2025-11-25 13:14:26,908 | INFO     | mean y: 2816537.085276968
[2025-11-25 14:15:05] 2025-11-25 13:14:26,908 | INFO     | intersect: -8566748629.26537
[2025-11-25 14:15:05] 2025-11-25 13:14:26,909 | INFO     | chi2: 33.07635477067884
[2025-11-25 14:15:05] 2025-11-25 13:14:26,915 | INFO     | sum of square deviations: 792109528781.1477
[2025-11-25 14:15:05] 2025-11-25 13:14:26,961 | INFO     | sum of deviations: 4329848973349.7866
[2025-11-25 14:15:05] 2025-11-25 13:14:26,961 | INFO     | mean x: 1764034342.0804682
[2025-11-25 14:15:05] 2025-11-25 13:14:26,961 | INFO     | mean y: 2824218.456474031
[2025-11-25 14:15:05] 2025-11-25 13:14:26,961 | INFO     | intersect: -9639784546.475058
[2025-11-25 14:15:05] 2025-11-25 13:14:26,963 | INFO     | chi2: 30.01288779409219
[2025-11-25 14:15:05] 2025-11-25 13:14:26,963 | INFO     | current chi2=30.01288779409219 (change=9.261803478121832 %)
[2025-11-25 14:15:05] 2025-11-25 13:14:26,963 | INFO     | right removable region: 1366
[2025-11-25 14:15:05] 2025-11-25 13:14:26,965 | INFO     | sum of square deviations: 792108627811.1471
[2025-11-25 14:15:05] 2025-11-25 13:14:27,015 | INFO     | sum of deviations: 3302478825188.077
[2025-11-25 14:15:05] 2025-11-25 13:14:27,015 | INFO     | mean x: 1764034647.0804682
[2025-11-25 14:15:05] 2025-11-25 13:14:27,015 | INFO     | mean y: 2826814.3811265547
[2025-11-25 14:15:05] 2025-11-25 13:14:27,015 | INFO     | intersect: -7351829938.922559
[2025-11-25 14:15:05] 2025-11-25 13:14:27,017 | INFO     | chi2: 27.879572510811137
[2025-11-25 14:15:05] 2025-11-25 13:14:27,017 | INFO     | current chi2=27.879572510811137 (change=15.711472125321649 %)
[2025-11-25 14:15:05] 2025-11-25 13:14:27,017 | INFO     | left removable region: 10
[2025-11-25 14:15:05] 2025-11-25 13:14:27,019 | INFO     | sum of square deviations: 773140351082.2025
[2025-11-25 14:15:05] 2025-11-25 13:14:27,062 | INFO     | sum of deviations: 3303370720315.1787
[2025-11-25 14:15:05] 2025-11-25 13:14:27,062 | INFO     | mean x: 1764034616.589233
[2025-11-25 14:15:05] 2025-11-25 13:14:27,062 | INFO     | mean y: 2846125.9985250738
[2025-11-25 14:15:05] 2025-11-25 13:14:27,062 | INFO     | intersect: -7534285125.664362
[2025-11-25 14:15:05] 2025-11-25 13:14:27,064 | INFO     | chi2: 19.544859185047155
[2025-11-25 14:15:05] 2025-11-25 13:14:27,064 | INFO     | current memory leak: 4.27 B/s (using 1356 data points, chi2=19.54)
[2025-11-25 14:15:05] 2025-11-25 13:14:27,067 | INFO     | could have reported an average CPU frequency of 2249 MHz (46 samples)
[2025-11-25 14:15:05] 2025-11-25 13:14:27,067 | INFO     | ..............................
[2025-11-25 14:15:05] 2025-11-25 13:14:27,067 | INFO     | . Timing measurements:
[2025-11-25 14:15:05] 2025-11-25 13:14:27,067 | INFO     | . get job = 0 s
[2025-11-25 14:15:05] 2025-11-25 13:14:27,067 | INFO     | . initial setup = 10 s
[2025-11-25 14:15:05] 2025-11-25 13:14:27,067 | INFO     | . payload setup = 189 s
[2025-11-25 14:15:05] 2025-11-25 13:14:27,067 | INFO     | . stage-in = 0 s
[2025-11-25 14:15:05] 2025-11-25 13:14:27,068 | INFO     | . payload execution = 83853 s
[2025-11-25 14:15:05] 2025-11-25 13:14:27,068 | INFO     | . stage-out = 4 s
[2025-11-25 14:15:05] 2025-11-25 13:14:27,068 | INFO     | . log creation = 2 s
[2025-11-25 14:15:05] 2025-11-25 13:14:27,068 | INFO     | ..............................
[2025-11-25 14:15:05] 2025-11-25 13:14:27,113 | INFO     | time since job start (84363s) is within the limit (172800.0s)
[2025-11-25 14:15:05] 2025-11-25 13:14:27,202 | INFO     | 
[2025-11-25 14:15:05] 2025-11-25 13:14:27,202 | INFO     | job summary report
[2025-11-25 14:15:05] 2025-11-25 13:14:27,202 | INFO     | --------------------------------------------------
[2025-11-25 14:15:05] 2025-11-25 13:14:27,202 | INFO     | PanDA job id: 6894265640
[2025-11-25 14:15:05] 2025-11-25 13:14:27,202 | INFO     | task id: 47533967
[2025-11-25 14:15:05] 2025-11-25 13:14:27,202 | INFO     | errors: (none)
[2025-11-25 14:15:05] 2025-11-25 13:14:27,202 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 14:15:05] 2025-11-25 13:14:27,202 | INFO     | pilot state: finished 
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | transexitcode: 0
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | exeerrorcode: 0
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | exeerrordiag: 
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | exitcode: 0
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | exitmsg: OK
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | cpuconsumptiontime: 317075 s
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | nevents: 1000
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | neventsw: 0
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | pid: 17385
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | pgrp: 17385
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | corecount: 8
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | event service: False
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | sizes: {0: 2284033, 1: 2284288, 12: 2284288, 23: 2284316, 34: 2284344, 44: 2284372, 55: 2284528, 66: 2284556, 76: 2284584, 87: 2284640, 98: 2284668, 106: 2285238, 
[2025-11-25 14:15:05] 2025-11-25 13:14:27,203 | INFO     | --------------------------------------------------
[2025-11-25 14:15:05] 2025-11-25 13:14:27,204 | INFO     | 
[2025-11-25 14:15:05] 2025-11-25 13:14:27,204 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-25 14:15:05] 2025-11-25 13:14:27,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 14:15:05] 2025-11-25 13:14:27,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,688 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 14:15:05] 2025-11-25 13:14:27,688 | INFO     | job 6894265640 has completed (purged errors)
[2025-11-25 14:15:05] 2025-11-25 13:14:27,688 | INFO     | overall cleanup function is called
[2025-11-25 14:15:05] 2025-11-25 13:14:28,708 | INFO     | --- collectZombieJob: --- 10, [17385]
[2025-11-25 14:15:05] 2025-11-25 13:14:28,708 | INFO     | zombie collector waiting for pid 17385
[2025-11-25 14:15:05] 2025-11-25 13:14:28,709 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 14:15:05] 2025-11-25 13:14:28,709 | INFO     | collected zombie processes
[2025-11-25 14:15:05] 2025-11-25 13:14:28,709 | INFO     | will attempt to kill all subprocesses of pid=17385
[2025-11-25 14:15:05] 2025-11-25 13:14:28,843 | INFO     | process IDs to be killed: [17385] (in reverse order)
[2025-11-25 14:15:05] 2025-11-25 13:14:29,972 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 14:15:05] 2025-11-25 13:14:29,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 14:15:05] 2025-11-25 13:14:29,975 | INFO     | did not find any defunct processes belonging to 17385
[2025-11-25 14:15:05] 2025-11-25 13:14:29,978 | INFO     | did not find any defunct processes belonging to 17385
[2025-11-25 14:15:05] 2025-11-25 13:14:30,031 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 14:15:05] 2025-11-25 13:14:30,032 | INFO     | ready for new job
[2025-11-25 14:15:05] 2025-11-25 13:14:30,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 14:15:05] 2025-11-25 13:14:30,038 | INFO     | ***************************************
[2025-11-25 14:15:05] 2025-11-25 13:14:30,038 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 14:15:05] 2025-11-25 13:14:30,038 | INFO     | ***************************************
[2025-11-25 14:15:05] 2025-11-25 13:14:30,038 | INFO     | 
[2025-11-25 14:15:05] 2025-11-25 13:14:30,039 | INFO     | pilot is running in a VM
[2025-11-25 14:15:05] 2025-11-25 13:14:30,039 | INFO     | architecture information:
[2025-11-25 14:15:05] 2025-11-25 13:14:30,042 | INFO     | executing command: cat /etc/os-release
[2025-11-25 14:15:05] 2025-11-25 13:14:30,313 | INFO     | cat /etc/os-release:
[2025-11-25 14:15:05] NAME="CentOS Linux"
[2025-11-25 14:15:05] VERSION="7 (Core)"
[2025-11-25 14:15:05] ID="centos"
[2025-11-25 14:15:05] ID_LIKE="rhel fedora"
[2025-11-25 14:15:05] VERSION_ID="7"
[2025-11-25 14:15:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 14:15:05] ANSI_COLOR="0;31"
[2025-11-25 14:15:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 14:15:05] HOME_URL="https://www.centos.org/"
[2025-11-25 14:15:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 14:15:05] 
[2025-11-25 14:15:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 14:15:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 14:15:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 14:15:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 14:15:05] 
[2025-11-25 14:15:05] 2025-11-25 13:14:30,313 | INFO     | ***************************************
[2025-11-25 14:15:05] 2025-11-25 13:14:30,817 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-25 14:15:05] 2025-11-25 13:14:31,070 | INFO     | sufficient remaining disk space (494898511872 B)
[2025-11-25 14:15:05] 2025-11-25 13:14:31,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 14:15:05] 2025-11-25 13:14:31,070 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 14:15:05] 2025-11-25 13:14:31,070 | INFO     | update_server=False
[2025-11-25 14:15:05] 2025-11-25 13:14:31,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 14:15:05] 2025-11-25 13:14:31,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 14:15:05] 2025-11-25 13:14:31,163 | INFO     | all job control threads have been joined
[2025-11-25 14:15:05] 2025-11-25 13:14:31,259 | INFO     | all data control threads have been joined
[2025-11-25 14:15:05] 2025-11-25 13:14:31,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:15:05] 2025-11-25 13:14:31,596 | INFO     | aborting loop
[2025-11-25 14:15:05] 2025-11-25 13:14:32,076 | INFO     | [job] retrieve thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:32,142 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:32,172 | INFO     | [job] control thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:32,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:15:05] 2025-11-25 13:14:32,265 | INFO     | [data] control thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:32,370 | INFO     | all payload control threads have been joined
[2025-11-25 14:15:05] 2025-11-25 13:14:32,601 | INFO     | [job] job monitor thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:32,673 | INFO     | [data] copytool_in thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:32,779 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:33,050 | INFO     | [payload] validate_post thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:33,078 | INFO     | [data] copytool_out thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:33,089 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:33,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 14:15:05] 2025-11-25 13:14:33,228 | INFO     | [job] queue monitor thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:33,376 | INFO     | [payload] control thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:33,393 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:33,420 | INFO     | [job] validate thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:33,668 | INFO     | [payload] failed_post thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:37,236 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 14:15:05] 2025-11-25 13:14:50,640 | INFO     | [monitor] cgroup control has ended
[2025-11-25 14:15:05] 2025-11-25 13:14:52,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263325972288)>', '<ExcThread(monitor, started 140262617638656)>']
[2025-11-25 14:15:05] 2025-11-25 13:14:57,367 | INFO     | all workflow threads have been joined
[2025-11-25 14:15:05] 2025-11-25 13:14:57,367 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 14:15:05] 2025-11-25 13:14:57,368 | INFO     | traces error code: 0
[2025-11-25 14:15:05] 2025-11-25 13:14:57,368 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 14:15:05] 2025-11-25 13:15:00,342 | INFO     | PID=10906 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 14:15:05] 2025-11-25 13:15:00,343 | INFO     | .. there are 9 such processes running
[2025-11-25 14:15:05] 2025-11-25 13:15:00,344 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 14:15:05] 2025-11-25 13:15:00,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 14:15:05] 2025-11-25 13:15:00,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 14:15:05] 2025-11-25 13:15:00,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 14:15:05] 2025-11-25 13:15:00,345 | INFO     | [monitor] control thread has ended
[2025-11-25 14:15:05] 2025-11-25 13:15:00,726 [wrapper] ==== pilot stdout END ====
[2025-11-25 14:15:05] 2025-11-25 13:15:00,806 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 14:15:05] 2025-11-25 13:15:00,814 [wrapper] pilotpid: 10906
[2025-11-25 14:15:05] 2025-11-25 13:15:00,942 [wrapper] Pilot exit status: 0
[2025-11-25 14:15:05] 2025-11-25 13:15:01,412 [wrapper] pandaids: 6894265640
[2025-11-25 14:15:05] 2025-11-25 13:15:02,266 [wrapper] cleanup supervisor_pilot  4508 10907
[2025-11-25 14:15:05] 2025-11-25 13:15:02,330 [wrapper] Test setup, not cleaning
[2025-11-25 14:15:05] 2025-11-25 13:15:02,467 [wrapper] apfmon messages muted
[2025-11-25 14:15:05] 2025-11-25 13:15:02,589 [wrapper] ==== wrapper stdout END ====
[2025-11-25 14:15:05] 2025-11-25 13:15:02,716 [wrapper] ==== wrapper stderr END ====
[2025-11-25 14:15:05]  *** Error codes and diagnostics ***
[2025-11-25 14:15:06]     "exeErrorCode": 0,
[2025-11-25 14:15:06]     "exeErrorDiag": "",
[2025-11-25 14:15:06]     "pilotErrorCode": 0,
[2025-11-25 14:15:06]     "pilotErrorDiag": "",
[2025-11-25 14:15:06]  *** Listing of results directory ***
[2025-11-25 14:15:06] total 1330620
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc    576529 Nov 21 05:56 pilot3.tar.gz
[2025-11-25 14:15:06] -rwx------. 1 boinc boinc     36292 Nov 21 06:01 runpilot2-wrapper.sh
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc      5112 Nov 21 06:01 queuedata.json
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc       100 Nov 24 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 14:15:06] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 14:43 run_atlas
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc       105 Nov 24 14:43 job.xml
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc      6393 Nov 24 14:43 init_data.xml
[2025-11-25 14:15:06] -rw-r--r--. 2 boinc boinc 409434092 Nov 24 14:43 EVNT.47493127._002215.pool.root.1
[2025-11-25 14:15:06] -rw-r--r--. 2 boinc boinc     15847 Nov 24 14:43 start_atlas.sh
[2025-11-25 14:15:06] drwxrwx--x. 2 boinc boinc        68 Nov 24 14:43 shared
[2025-11-25 14:15:06] -rw-r--r--. 2 boinc boinc    590101 Nov 24 14:43 input.tar.gz
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc         0 Nov 24 14:43 boinc_lockfile
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc      2785 Nov 24 14:44 pandaJob.out
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc    988280 Nov 24 14:48 agis_schedconf.cvmfs.json
[2025-11-25 14:15:06] drwx------. 5 boinc boinc      4096 Nov 24 14:48 pilot3
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc       533 Nov 25 13:48 boinc_task_state.xml
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc 921611168 Nov 25 14:11 HITS.47533967._001870.pool.root.1
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc      1033 Nov 25 14:12 memory_monitor_summary.json
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc   1516240 Nov 25 14:12 agis_ddmendpoints.agis.ALL.json
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc   2469984 Nov 25 14:12 log.47533967._001870.job.log.tgz.1
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc      8634 Nov 25 14:14 heartbeat.json
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc      8192 Nov 25 14:14 boinc_mmap_file
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc        29 Nov 25 14:14 wrapper_checkpoint.txt
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc        95 Nov 25 14:15 pilot_heartbeat.json
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc       820 Nov 25 14:15 pilotlog.txt
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc  11337549 Nov 25 14:15 log.47533967._001870.job.log.1
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc       353 Nov 25 14:15 output.list
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc       620 Nov 25 14:15 runtime_log
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc  13824000 Nov 25 14:15 result.tar.gz
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc      8833 Nov 25 14:15 runtime_log.err
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc       662 Nov 25 14:15 aQPNDmQSYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmR4IKDmvpP2Gm.diag
[2025-11-25 14:15:06] -rw-r--r--. 1 boinc boinc     21440 Nov 25 14:15 stderr.txt
[2025-11-25 14:15:06] HITS file was successfully produced:
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc 921611168 Nov 25 14:11 shared/HITS.pool.root.1
[2025-11-25 14:15:06]  *** Contents of shared directory: ***
[2025-11-25 14:15:06] total 1313948
[2025-11-25 14:15:06] -rw-r--r--. 2 boinc boinc 409434092 Nov 24 14:43 ATLAS.root_0
[2025-11-25 14:15:06] -rw-r--r--. 2 boinc boinc     15847 Nov 24 14:43 start_atlas.sh
[2025-11-25 14:15:06] -rw-r--r--. 2 boinc boinc    590101 Nov 24 14:43 input.tar.gz
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc 921611168 Nov 25 14:11 HITS.pool.root.1
[2025-11-25 14:15:06] -rw-------. 1 boinc boinc  13824000 Nov 25 14:15 result.tar.gz
14:15:07 (7169): run_atlas exited; CPU time 317499.886736
14:15:07 (7169): called boinc_finish(0)

</stderr_txt>
]]>

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