Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
19:08:06 (2191953): wrapper (7.7.26015): starting
19:08:06 (2191953): wrapper: running run_atlas (--nthreads 2)
[2025-11-21 19:08:06] Arguments: --nthreads 2
[2025-11-21 19:08:06] Threads: 2
[2025-11-21 19:08:06] Checking for CVMFS
[2025-11-21 19:08:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 19:08:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 19:08:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 19:08:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 19:08:08] 2.13.3.0 2192238 0 24764 153138 3 1 3145358 4096001 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-21 19:08:08] CVMFS is ok
[2025-11-21 19:08:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 19:08:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-21 19:08:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-21 19:08:08] Further information can be found at the LHC@home message board.
[2025-11-21 19:08:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 19:08:08] Checking for apptainer binary...
[2025-11-21 19:08:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 19:08:08] Running /usr/bin/apptainer --version
[2025-11-21 19:08:08] apptainer version 1.4.4
[2025-11-21 19:08:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 19:08:08] Ryzen-9-7950X3D-Zen4-Ubu24
[2025-11-21 19:08:08] apptainer works
[2025-11-21 19:08:08] Set ATHENA_PROC_NUMBER=2
[2025-11-21 19:08:08] Set ATHENA_CORE_NUMBER=2
[2025-11-21 19:08:08] Starting ATLAS job with PandaID=6894257936
[2025-11-21 19:08:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 10:01:52]  *** The last 200 lines of the pilot log: ***
[2025-11-22 10:01:52] 2025-11-22 09:00:57,512 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4283.3174687499995
[2025-11-22 10:01:52] 2025-11-22 09:00:57,515 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6894257936/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 10:01:52] 2025-11-22 09:00:57,515 | INFO     | extracted standard info from prmon json
[2025-11-22 10:01:52] 2025-11-22 09:00:57,515 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 10:01:52] 2025-11-22 09:00:57,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 10:01:52] 2025-11-22 09:00:57,522 | INFO     | fitting pss+swap vs Time
[2025-11-22 10:01:52] 2025-11-22 09:00:57,522 | INFO     | sum of square deviations: 209875337879.5
[2025-11-22 10:01:52] 2025-11-22 09:00:57,530 | INFO     | sum of deviations: 336074523376.0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,530 | INFO     | mean x: 1763775269.5
[2025-11-22 10:01:52] 2025-11-22 09:00:57,530 | INFO     | mean y: 1942431.4419134397
[2025-11-22 10:01:52] 2025-11-22 09:00:57,530 | INFO     | intersect: -2822400528.6629167
[2025-11-22 10:01:52] 2025-11-22 09:00:57,531 | INFO     | chi2: 2.4340544562183566
[2025-11-22 10:01:52] 2025-11-22 09:00:57,531 | INFO     | sum of square deviations: 206310145452.0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,539 | INFO     | sum of deviations: 408647178697.00006
[2025-11-22 10:01:52] 2025-11-22 09:00:57,539 | INFO     | mean x: 1763775117.0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,539 | INFO     | mean y: 1945525.9896907217
[2025-11-22 10:01:52] 2025-11-22 09:00:57,540 | INFO     | intersect: -3491638000.1084633
[2025-11-22 10:01:52] 2025-11-22 09:00:57,540 | INFO     | chi2: 1.5437628911618175
[2025-11-22 10:01:52] 2025-11-22 09:00:57,540 | INFO     | current chi2=1.5437628911618175 (change=36.57648508159227 %)
[2025-11-22 10:01:52] 2025-11-22 09:00:57,540 | INFO     | sum of square deviations: 202785558437.0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,548 | INFO     | sum of deviations: 406011196585.49994
[2025-11-22 10:01:52] 2025-11-22 09:00:57,548 | INFO     | mean x: 1763774964.5
[2025-11-22 10:01:52] 2025-11-22 09:00:57,548 | INFO     | mean y: 1945411.9158986176
[2025-11-22 10:01:52] 2025-11-22 09:00:57,548 | INFO     | intersect: -3529432213.609981
[2025-11-22 10:01:52] 2025-11-22 09:00:57,549 | INFO     | chi2: 1.5429155890640507
[2025-11-22 10:01:52] 2025-11-22 09:00:57,549 | INFO     | current chi2=1.5429155890640507 (change=0.05488550752306107 %)
[2025-11-22 10:01:52] 2025-11-22 09:00:57,549 | INFO     | right removable region: 867
[2025-11-22 10:01:52] 2025-11-22 09:00:57,549 | INFO     | sum of square deviations: 206310145452.0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,557 | INFO     | sum of deviations: 229518915308.99997
[2025-11-22 10:01:52] 2025-11-22 09:00:57,557 | INFO     | mean x: 1763775422.0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,557 | INFO     | mean y: 1946976.575028637
[2025-11-22 10:01:52] 2025-11-22 09:00:57,557 | INFO     | intersect: -1960243592.4791667
[2025-11-22 10:01:52] 2025-11-22 09:00:57,557 | INFO     | chi2: 0.9360173254260842
[2025-11-22 10:01:52] 2025-11-22 09:00:57,557 | INFO     | current chi2=0.9360173254260842 (change=61.544930803219664 %)
[2025-11-22 10:01:52] 2025-11-22 09:00:57,558 | INFO     | sum of square deviations: 202785558437.0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,566 | INFO     | sum of deviations: 220833669977.99997
[2025-11-22 10:01:52] 2025-11-22 09:00:57,566 | INFO     | mean x: 1763775574.5
[2025-11-22 10:01:52] 2025-11-22 09:00:57,566 | INFO     | mean y: 1947352.9562211982
[2025-11-22 10:01:52] 2025-11-22 09:00:57,566 | INFO     | intersect: -1918805959.7378767
[2025-11-22 10:01:52] 2025-11-22 09:00:57,566 | INFO     | chi2: 0.9324114374745425
[2025-11-22 10:01:52] 2025-11-22 09:00:57,566 | INFO     | current chi2=0.9324114374745425 (change=0.3852373084974975 %)
[2025-11-22 10:01:52] 2025-11-22 09:00:57,566 | INFO     | left removable region: 20
[2025-11-22 10:01:52] 2025-11-22 09:00:57,567 | INFO     | sum of square deviations: 188420455608.0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,573 | INFO     | monitor loop #4050: job 0:6894257936 is in state 'finished'
[2025-11-22 10:01:52] 2025-11-22 09:00:57,574 | INFO     | sum of deviations: 264989253381.00006
[2025-11-22 10:01:52] 2025-11-22 09:00:57,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 10:01:52] 2025-11-22 09:00:57,577 | INFO     | mean x: 1763775544.0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,581 | INFO     | mean y: 1951574.171192444
[2025-11-22 10:01:52] 2025-11-22 09:00:57,581 | INFO     | intersect: -2478572968.814697
[2025-11-22 10:01:52] 2025-11-22 09:00:57,581 | INFO     | chi2: 0.02641673941002548
[2025-11-22 10:01:52] 2025-11-22 09:00:57,581 | INFO     | current memory leak: 1.41 B/s (using 847 data points, chi2=0.03)
[2025-11-22 10:01:52] 2025-11-22 09:00:57,582 | INFO     | could have reported an average CPU frequency of 4420 MHz (33 samples)
[2025-11-22 10:01:52] 2025-11-22 09:00:57,582 | INFO     | ..............................
[2025-11-22 10:01:52] 2025-11-22 09:00:57,582 | INFO     | . Timing measurements:
[2025-11-22 10:01:52] 2025-11-22 09:00:57,582 | INFO     | . get job = 0 s
[2025-11-22 10:01:52] 2025-11-22 09:00:57,582 | INFO     | . initial setup = 1 s
[2025-11-22 10:01:52] 2025-11-22 09:00:57,582 | INFO     | . payload setup = 4 s
[2025-11-22 10:01:52] 2025-11-22 09:00:57,582 | INFO     | . stage-in = 0 s
[2025-11-22 10:01:52] 2025-11-22 09:00:57,582 | INFO     | . payload execution = 53526 s
[2025-11-22 10:01:52] 2025-11-22 09:00:57,582 | INFO     | . stage-out = 1 s
[2025-11-22 10:01:52] 2025-11-22 09:00:57,582 | INFO     | . log creation = 0 s
[2025-11-22 10:01:52] 2025-11-22 09:00:57,582 | INFO     | ..............................
[2025-11-22 10:01:52] 2025-11-22 09:00:57,622 | INFO     | 
[2025-11-22 10:01:52] 2025-11-22 09:00:57,622 | INFO     | job summary report
[2025-11-22 10:01:52] 2025-11-22 09:00:57,622 | INFO     | --------------------------------------------------
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | PanDA job id: 6894257936
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | task id: 47533967
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | errors: (none)
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | pilot state: finished 
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | transexitcode: 0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | exeerrorcode: 0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | exeerrordiag: 
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | exitcode: 0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | exitmsg: OK
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | cpuconsumptiontime: 107008 s
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | nevents: 1000
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | neventsw: 0
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | pid: 2213607
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | pgrp: 2213607
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | corecount: 2
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | event service: False
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | sizes: {0: 2298637, 1: 2298836, 4: 2299098, 11: 2299126, 53534: 2348627, 53536: 2357819, 53545: 2358073}
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | --------------------------------------------------
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | 
[2025-11-22 10:01:52] 2025-11-22 09:00:57,623 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 10:01:52] 2025-11-22 09:00:57,645 | INFO     | job 6894257936 has completed (purged errors)
[2025-11-22 10:01:52] 2025-11-22 09:00:57,646 | INFO     | overall cleanup function is called
[2025-11-22 10:01:52] 2025-11-22 09:00:58,578 | INFO     | PID=2200252 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 10:01:52] 2025-11-22 09:00:58,578 | INFO     | .. there are 2 such processes running
[2025-11-22 10:01:52] 2025-11-22 09:00:58,655 | INFO     | --- collectZombieJob: --- 10, [2213607]
[2025-11-22 10:01:52] 2025-11-22 09:00:58,655 | INFO     | zombie collector waiting for pid 2213607
[2025-11-22 10:01:52] 2025-11-22 09:00:58,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 10:01:52] 2025-11-22 09:00:58,655 | INFO     | collected zombie processes
[2025-11-22 10:01:52] 2025-11-22 09:00:58,655 | INFO     | will attempt to kill all subprocesses of pid=2213607
[2025-11-22 10:01:52] 2025-11-22 09:00:58,712 | INFO     | process IDs to be killed: [2213607] (in reverse order)
[2025-11-22 10:01:52] 2025-11-22 09:00:58,752 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 10:01:52] 2025-11-22 09:00:58,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 10:01:52] 2025-11-22 09:00:58,754 | INFO     | did not find any defunct processes belonging to 2213607
[2025-11-22 10:01:52] 2025-11-22 09:00:58,756 | INFO     | did not find any defunct processes belonging to 2213607
[2025-11-22 10:01:52] 2025-11-22 09:00:58,757 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 10:01:52] 2025-11-22 09:00:58,757 | INFO     | ready for new job
[2025-11-22 10:01:52] 2025-11-22 09:00:58,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 10:01:52] 2025-11-22 09:00:58,760 | INFO     | ***************************************
[2025-11-22 10:01:52] 2025-11-22 09:00:58,760 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 10:01:52] 2025-11-22 09:00:58,760 | INFO     | ***************************************
[2025-11-22 10:01:52] 2025-11-22 09:00:58,760 | INFO     | 
[2025-11-22 10:01:52] 2025-11-22 09:00:58,761 | INFO     | architecture information:
[2025-11-22 10:01:52] 2025-11-22 09:00:58,761 | INFO     | executing command: cat /etc/os-release
[2025-11-22 10:01:52] 2025-11-22 09:00:58,779 | INFO     | cat /etc/os-release:
[2025-11-22 10:01:52] NAME="CentOS Linux"
[2025-11-22 10:01:52] VERSION="7 (Core)"
[2025-11-22 10:01:52] ID="centos"
[2025-11-22 10:01:52] ID_LIKE="rhel fedora"
[2025-11-22 10:01:52] VERSION_ID="7"
[2025-11-22 10:01:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 10:01:52] ANSI_COLOR="0;31"
[2025-11-22 10:01:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 10:01:52] HOME_URL="https://www.centos.org/"
[2025-11-22 10:01:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 10:01:52] 
[2025-11-22 10:01:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 10:01:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 10:01:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 10:01:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 10:01:52] 
[2025-11-22 10:01:52] 2025-11-22 09:00:58,779 | INFO     | ***************************************
[2025-11-22 10:01:52] 2025-11-22 09:00:59,281 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-22 10:01:52] 2025-11-22 09:00:59,304 | INFO     | sufficient remaining disk space (1762660450304 B)
[2025-11-22 10:01:52] 2025-11-22 09:00:59,304 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 10:01:52] 2025-11-22 09:00:59,304 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 10:01:52] 2025-11-22 09:00:59,304 | INFO     | update_server=False
[2025-11-22 10:01:52] 2025-11-22 09:00:59,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 10:01:52] 2025-11-22 09:00:59,307 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-22 10:01:52] 2025-11-22 09:00:59,307 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 10:01:52] 2025-11-22 09:00:59,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 10:01:52] 2025-11-22 09:00:59,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 10:01:52] 2025-11-22 09:00:59,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 10:01:52] 2025-11-22 09:00:59,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 10:01:52] 2025-11-22 09:00:59,308 | INFO     | aborting loop
[2025-11-22 10:01:52] 2025-11-22 09:00:59,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 10:01:52] 2025-11-22 09:00:59,460 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 10:01:52] 2025-11-22 09:00:59,648 | INFO     | all data control threads have been joined
[2025-11-22 10:01:52] 2025-11-22 09:01:00,200 | INFO     | all payload control threads have been joined
[2025-11-22 10:01:52] 2025-11-22 09:01:00,309 | INFO     | [job] retrieve thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:00,312 | INFO     | [job] queue monitor thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:00,313 | INFO     | [job] job monitor thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:00,340 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:00,414 | INFO     | [data] copytool_in thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:00,581 | INFO     | [payload] validate_post thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:00,653 | INFO     | [data] control thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:00,662 | INFO     | [job] validate thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:00,697 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:00,757 | INFO     | all job control threads have been joined
[2025-11-22 10:01:52] 2025-11-22 09:01:00,761 | INFO     | [payload] failed_post thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:01,205 | INFO     | [payload] control thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:01,269 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:01,401 | INFO     | [data] copytool_out thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:01,762 | INFO     | [job] control thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:03,465 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:09,946 | INFO     | job.realtimelogging is not enabled
[2025-11-22 10:01:52] 2025-11-22 09:01:10,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 10:01:52] 2025-11-22 09:01:46,519 | INFO     | [monitor] cgroup control has ended
[2025-11-22 10:01:52] 2025-11-22 09:01:47,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136137333565248)>', '<ExcThread(monitor, started 136137051965184)>']
[2025-11-22 10:01:52] 2025-11-22 09:01:47,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 10:01:52] 2025-11-22 09:01:47,557 | INFO     | [monitor] control thread has ended
[2025-11-22 10:01:52] 2025-11-22 09:01:52,534 | INFO     | all workflow threads have been joined
[2025-11-22 10:01:52] 2025-11-22 09:01:52,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 10:01:52] 2025-11-22 09:01:52,534 | INFO     | traces error code: 0
[2025-11-22 10:01:52] 2025-11-22 09:01:52,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 10:01:52] 2025-11-22 09:01:52,602 [wrapper] ==== pilot stdout END ====
[2025-11-22 10:01:52] 2025-11-22 09:01:52,606 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 10:01:52] 2025-11-22 09:01:52,608 [wrapper] pilotpid: 2200252
[2025-11-22 10:01:52] 2025-11-22 09:01:52,609 [wrapper] Pilot exit status: 0
[2025-11-22 10:01:52] 2025-11-22 09:01:52,620 [wrapper] pandaids: 6894257936
[2025-11-22 10:01:52] 2025-11-22 09:01:52,640 [wrapper] cleanup supervisor_pilot 2510309 2200254
[2025-11-22 10:01:52] 2025-11-22 09:01:52,643 [wrapper] Test setup, not cleaning
[2025-11-22 10:01:52] 2025-11-22 09:01:52,645 [wrapper] apfmon messages muted
[2025-11-22 10:01:52] 2025-11-22 09:01:52,646 [wrapper] ==== wrapper stdout END ====
[2025-11-22 10:01:52] 2025-11-22 09:01:52,647 [wrapper] ==== wrapper stderr END ====
[2025-11-22 10:01:52]  *** Error codes and diagnostics ***
[2025-11-22 10:01:52]     "exeErrorCode": 0,
[2025-11-22 10:01:52]     "exeErrorDiag": "",
[2025-11-22 10:01:52]     "pilotErrorCode": 0,
[2025-11-22 10:01:52]     "pilotErrorDiag": "",
[2025-11-22 10:01:52]  *** Listing of results directory ***
[2025-11-22 10:01:52] total 1318416
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc    576529 Nov 21 04:09 pilot3.tar.gz
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc      5112 Nov 21 04:34 queuedata.json
[2025-11-22 10:01:52] -rwx------ 1 boinc boinc     36292 Nov 21 04:36 runpilot2-wrapper.sh
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc       100 Nov 21 19:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 10:01:52] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 19:08 run_atlas
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc       105 Nov 21 19:08 job.xml
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc      9569 Nov 21 19:08 init_data.xml
[2025-11-22 10:01:52] -rw-r--r-- 2 boinc boinc 409220202 Nov 21 19:08 EVNT.47493127._002169.pool.root.1
[2025-11-22 10:01:52] -rw-r--r-- 2 boinc boinc     15847 Nov 21 19:08 start_atlas.sh
[2025-11-22 10:01:52] drwxrwx--x 2 boinc boinc      4096 Nov 21 19:08 shared
[2025-11-22 10:01:52] -rw-r--r-- 2 boinc boinc    590104 Nov 21 19:08 input.tar.gz
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc         0 Nov 21 19:08 boinc_lockfile
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc      2783 Nov 21 19:08 pandaJob.out
[2025-11-22 10:01:52] -rw------- 1 boinc boinc    989798 Nov 21 19:08 agis_schedconf.cvmfs.json
[2025-11-22 10:01:52] drwx------ 5 boinc boinc      4096 Nov 21 19:08 pilot3
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc       533 Nov 22 09:58 boinc_task_state.xml
[2025-11-22 10:01:52] -rw------- 1 boinc boinc 918782184 Nov 22 10:00 HITS.47533967._001401.pool.root.1
[2025-11-22 10:01:52] -rw------- 1 boinc boinc        95 Nov 22 10:00 pilot_heartbeat.json
[2025-11-22 10:01:52] -rw------- 1 boinc boinc      1032 Nov 22 10:00 memory_monitor_summary.json
[2025-11-22 10:01:52] -rw------- 1 boinc boinc   1526164 Nov 22 10:00 agis_ddmendpoints.agis.ALL.json
[2025-11-22 10:01:52] -rw------- 1 boinc boinc   1339991 Nov 22 10:00 log.47533967._001401.job.log.tgz.1
[2025-11-22 10:01:52] -rw------- 1 boinc boinc      7905 Nov 22 10:00 heartbeat.json
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc      8192 Nov 22 10:01 boinc_mmap_file
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc        29 Nov 22 10:01 wrapper_checkpoint.txt
[2025-11-22 10:01:52] -rw------- 1 boinc boinc      4633 Nov 22 10:01 pilotlog.txt
[2025-11-22 10:01:52] -rw------- 1 boinc boinc   7722817 Nov 22 10:01 log.47533967._001401.job.log.1
[2025-11-22 10:01:52] -rw------- 1 boinc boinc       353 Nov 22 10:01 output.list
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc       620 Nov 22 10:01 runtime_log
[2025-11-22 10:01:52] -rw------- 1 boinc boinc   9082880 Nov 22 10:01 result.tar.gz
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc      8970 Nov 22 10:01 runtime_log.err
[2025-11-22 10:01:52] -rw------- 1 boinc boinc       666 Nov 22 10:01 CkeLDmV7Wg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNyIKDmnbC58m.diag
[2025-11-22 10:01:52] -rw-r--r-- 1 boinc boinc     21371 Nov 22 10:01 stderr.txt
[2025-11-22 10:01:52] HITS file was successfully produced:
[2025-11-22 10:01:52] -rw------- 1 boinc boinc 918782184 Nov 22 10:00 shared/HITS.pool.root.1
[2025-11-22 10:01:52]  *** Contents of shared directory: ***
[2025-11-22 10:01:52] total 1306360
[2025-11-22 10:01:52] -rw-r--r-- 2 boinc boinc 409220202 Nov 21 19:08 ATLAS.root_0
[2025-11-22 10:01:52] -rw-r--r-- 2 boinc boinc     15847 Nov 21 19:08 start_atlas.sh
[2025-11-22 10:01:52] -rw-r--r-- 2 boinc boinc    590104 Nov 21 19:08 input.tar.gz
[2025-11-22 10:01:52] -rw------- 1 boinc boinc 918782184 Nov 22 10:00 HITS.pool.root.1
[2025-11-22 10:01:52] -rw------- 1 boinc boinc   9082880 Nov 22 10:01 result.tar.gz
10:01:53 (2191953): run_atlas exited; CPU time 107029.118507
10:01:53 (2191953): called boinc_finish(0)

</stderr_txt>
]]>

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