Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:54:29 (5868): wrapper (7.7.26015): starting
10:54:29 (5868): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 10:54:29] Arguments: --nthreads 8
[2025-11-21 10:54:29] Threads: 8
[2025-11-21 10:54:29] Checking for CVMFS
[2025-11-21 10:54:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 10:54:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 10:54:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 10:54:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 10:54:29] 2.11.2.0 2951 17574 75152 153133 1 82 19515075 20275200 1 130560 0 1950117 99.347 1368832 29498 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 10:54:29] CVMFS is ok
[2025-11-21 10:54:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 10:54:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 10:54:29] Further information can be found at the LHC@home message board.
[2025-11-21 10:54:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 10:54:29] Checking for apptainer binary...
[2025-11-21 10:54:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 10:54:29] Running /usr/bin/apptainer --version
[2025-11-21 10:54:29] apptainer version 1.3.2-1.el7
[2025-11-21 10:54:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 10:54:31] c-204-23.aglt2.org
[2025-11-21 10:54:31] apptainer works
[2025-11-21 10:54:31] Set ATHENA_PROC_NUMBER=8
[2025-11-21 10:54:31] Set ATHENA_CORE_NUMBER=8
[2025-11-21 10:54:31] Starting ATLAS job with PandaID=6894252282
[2025-11-21 10:54:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 23:08:08]  *** The last 200 lines of the pilot log: ***
[2025-11-21 23:08:08] 2025-11-22 04:07:17,466 | INFO     | monitor loop #3225: job 0:6894252282 is in state 'finished'
[2025-11-21 23:08:08] 2025-11-22 04:07:17,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:08:08] 2025-11-22 04:07:18,008 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 23:08:08] 2025-11-22 04:07:18,011 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-21 23:08:08] 2025-11-22 04:07:18,013 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894252282/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 23:08:08] 2025-11-22 04:07:18,014 | INFO     | extracted standard info from prmon json
[2025-11-21 23:08:08] 2025-11-22 04:07:18,014 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 23:08:08] 2025-11-22 04:07:18,014 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 23:08:08] 2025-11-22 04:07:18,026 | INFO     | fitting pss+swap vs Time
[2025-11-21 23:08:08] 2025-11-22 04:07:18,027 | INFO     | sum of square deviations: 115737792570.33157
[2025-11-21 23:08:08] 2025-11-22 04:07:18,038 | INFO     | sum of deviations: 802678305178.3038
[2025-11-21 23:08:08] 2025-11-22 04:07:18,038 | INFO     | mean x: 1763762451.1097221
[2025-11-21 23:08:08] 2025-11-22 04:07:18,038 | INFO     | mean y: 3064452.970833333
[2025-11-21 23:08:08] 2025-11-22 04:07:18,038 | INFO     | intersect: -12229187636.45423
[2025-11-21 23:08:08] 2025-11-22 04:07:18,039 | INFO     | chi2: 5.676195219535227
[2025-11-21 23:08:08] 2025-11-22 04:07:18,040 | INFO     | sum of square deviations: 113343425753.46028
[2025-11-21 23:08:08] 2025-11-22 04:07:18,051 | INFO     | sum of deviations: 1036056487406.5591
[2025-11-21 23:08:08] 2025-11-22 04:07:18,051 | INFO     | mean x: 1763762298.613986
[2025-11-21 23:08:08] 2025-11-22 04:07:18,051 | INFO     | mean y: 3079310.944055944
[2025-11-21 23:08:08] 2025-11-22 04:07:18,051 | INFO     | intersect: -16119226500.571768
[2025-11-21 23:08:08] 2025-11-22 04:07:18,052 | INFO     | chi2: 3.0035221497213684
[2025-11-21 23:08:08] 2025-11-22 04:07:18,052 | INFO     | current chi2=3.0035221497213684 (change=47.08564392950354 %)
[2025-11-21 23:08:08] 2025-11-22 04:07:18,053 | INFO     | sum of square deviations: 110982315374.06174
[2025-11-21 23:08:08] 2025-11-22 04:07:18,063 | INFO     | sum of deviations: 1140797884029.4
[2025-11-21 23:08:08] 2025-11-22 04:07:18,063 | INFO     | mean x: 1763762146.11831
[2025-11-21 23:08:08] 2025-11-22 04:07:18,063 | INFO     | mean y: 3086071.9
[2025-11-21 23:08:08] 2025-11-22 04:07:18,064 | INFO     | intersect: -18126794508.093548
[2025-11-21 23:08:08] 2025-11-22 04:07:18,064 | INFO     | chi2: 2.3612104463099306
[2025-11-21 23:08:08] 2025-11-22 04:07:18,064 | INFO     | current chi2=2.3612104463099306 (change=21.385282724518078 %)
[2025-11-21 23:08:08] 2025-11-22 04:07:18,065 | INFO     | right removable region: 709
[2025-11-21 23:08:08] 2025-11-22 04:07:18,065 | INFO     | sum of square deviations: 113343157963.46004
[2025-11-21 23:08:08] 2025-11-22 04:07:18,076 | INFO     | sum of deviations: 596604829493.3767
[2025-11-21 23:08:08] 2025-11-22 04:07:18,076 | INFO     | mean x: 1763762603.613986
[2025-11-21 23:08:08] 2025-11-22 04:07:18,076 | INFO     | mean y: 3077555.2223776225
[2025-11-21 23:08:08] 2025-11-22 04:07:18,076 | INFO     | intersect: -9280846647.199709
[2025-11-21 23:08:08] 2025-11-22 04:07:18,077 | INFO     | chi2: 3.5354943634315426
[2025-11-21 23:08:08] 2025-11-22 04:07:18,077 | INFO     | current chi2=3.5354943634315426 (change=37.71365806334912 %)
[2025-11-21 23:08:08] 2025-11-22 04:07:18,078 | INFO     | sum of square deviations: 110981866658.52972
[2025-11-21 23:08:08] 2025-11-22 04:07:18,089 | INFO     | sum of deviations: 551502405019.8225
[2025-11-21 23:08:08] 2025-11-22 04:07:18,089 | INFO     | mean x: 1763762756.115493
[2025-11-21 23:08:08] 2025-11-22 04:07:18,089 | INFO     | mean y: 3080466.8070422537
[2025-11-21 23:08:08] 2025-11-22 04:07:18,089 | INFO     | intersect: -8761589214.546932
[2025-11-21 23:08:08] 2025-11-22 04:07:18,090 | INFO     | chi2: 3.491320487684042
[2025-11-21 23:08:08] 2025-11-22 04:07:18,090 | INFO     | current chi2=3.491320487684042 (change=1.2494398578145511 %)
[2025-11-21 23:08:08] 2025-11-22 04:07:18,090 | INFO     | left removable region: 20
[2025-11-21 23:08:08] 2025-11-22 04:07:18,091 | INFO     | sum of square deviations: 101422835391.39037
[2025-11-21 23:08:08] 2025-11-22 04:07:18,101 | INFO     | sum of deviations: 849602752504.7812
[2025-11-21 23:08:08] 2025-11-22 04:07:18,101 | INFO     | mean x: 1763762725.6255443
[2025-11-21 23:08:08] 2025-11-22 04:07:18,101 | INFO     | mean y: 3106670.5805515237
[2025-11-21 23:08:08] 2025-11-22 04:07:18,102 | INFO     | intersect: -14771649533.720978
[2025-11-21 23:08:08] 2025-11-22 04:07:18,102 | INFO     | chi2: 0.1117368835437264
[2025-11-21 23:08:08] 2025-11-22 04:07:18,103 | INFO     | current memory leak: 8.38 B/s (using 689 data points, chi2=0.11)
[2025-11-21 23:08:08] 2025-11-22 04:07:18,103 | INFO     | could have reported an average CPU frequency of 2154 MHz (28 samples)
[2025-11-21 23:08:08] 2025-11-22 04:07:18,103 | INFO     | ..............................
[2025-11-21 23:08:08] 2025-11-22 04:07:18,103 | INFO     | . Timing measurements:
[2025-11-21 23:08:08] 2025-11-22 04:07:18,103 | INFO     | . get job = 0 s
[2025-11-21 23:08:08] 2025-11-22 04:07:18,104 | INFO     | . initial setup = 2 s
[2025-11-21 23:08:08] 2025-11-22 04:07:18,104 | INFO     | . payload setup = 8 s
[2025-11-21 23:08:08] 2025-11-22 04:07:18,104 | INFO     | . stage-in = 0 s
[2025-11-21 23:08:08] 2025-11-22 04:07:18,104 | INFO     | . payload execution = 43903 s
[2025-11-21 23:08:08] 2025-11-22 04:07:18,104 | INFO     | . stage-out = 3 s
[2025-11-21 23:08:08] 2025-11-22 04:07:18,104 | INFO     | . log creation = 0 s
[2025-11-21 23:08:08] 2025-11-22 04:07:18,104 | INFO     | ..............................
[2025-11-21 23:08:08] 2025-11-22 04:07:18,194 | INFO     | 
[2025-11-21 23:08:08] 2025-11-22 04:07:18,194 | INFO     | job summary report
[2025-11-21 23:08:08] 2025-11-22 04:07:18,194 | INFO     | --------------------------------------------------
[2025-11-21 23:08:08] 2025-11-22 04:07:18,194 | INFO     | PanDA job id: 6894252282
[2025-11-21 23:08:08] 2025-11-22 04:07:18,195 | INFO     | task id: 47533967
[2025-11-21 23:08:08] 2025-11-22 04:07:18,195 | INFO     | errors: (none)
[2025-11-21 23:08:08] 2025-11-22 04:07:18,195 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 23:08:08] 2025-11-22 04:07:18,195 | INFO     | pilot state: finished 
[2025-11-21 23:08:08] 2025-11-22 04:07:18,195 | INFO     | transexitcode: 0
[2025-11-21 23:08:08] 2025-11-22 04:07:18,195 | INFO     | exeerrorcode: 0
[2025-11-21 23:08:08] 2025-11-22 04:07:18,195 | INFO     | exeerrordiag: 
[2025-11-21 23:08:08] 2025-11-22 04:07:18,196 | INFO     | exitcode: 0
[2025-11-21 23:08:08] 2025-11-22 04:07:18,196 | INFO     | exitmsg: OK
[2025-11-21 23:08:08] 2025-11-22 04:07:18,196 | INFO     | cpuconsumptiontime: 340208 s
[2025-11-21 23:08:08] 2025-11-22 04:07:18,196 | INFO     | nevents: 1000
[2025-11-21 23:08:08] 2025-11-22 04:07:18,196 | INFO     | neventsw: 0
[2025-11-21 23:08:08] 2025-11-22 04:07:18,196 | INFO     | pid: 16118
[2025-11-21 23:08:08] 2025-11-22 04:07:18,197 | INFO     | pgrp: 16118
[2025-11-21 23:08:08] 2025-11-22 04:07:18,197 | INFO     | corecount: 8
[2025-11-21 23:08:08] 2025-11-22 04:07:18,197 | INFO     | event service: False
[2025-11-21 23:08:08] 2025-11-22 04:07:18,197 | INFO     | sizes: {0: 2298805, 6: 2299067, 11: 2299095, 43916: 2344604, 43920: 2353598, 43921: 2353682, 43932: 2354080}
[2025-11-21 23:08:08] 2025-11-22 04:07:18,197 | INFO     | --------------------------------------------------
[2025-11-21 23:08:08] 2025-11-22 04:07:18,197 | INFO     | 
[2025-11-21 23:08:08] 2025-11-22 04:07:18,198 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 23:08:08] 2025-11-22 04:07:18,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,226 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,226 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,226 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,226 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,228 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,228 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,228 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,228 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,228 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,229 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,229 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 23:08:08] 2025-11-22 04:07:18,229 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,229 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 23:08:08] 2025-11-22 04:07:18,230 | INFO     | job 6894252282 has completed (purged errors)
[2025-11-21 23:08:08] 2025-11-22 04:07:18,230 | INFO     | overall cleanup function is called
[2025-11-21 23:08:08] 2025-11-22 04:07:19,247 | INFO     | --- collectZombieJob: --- 10, [16118]
[2025-11-21 23:08:08] 2025-11-22 04:07:19,248 | INFO     | zombie collector waiting for pid 16118
[2025-11-21 23:08:08] 2025-11-22 04:07:19,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 23:08:08] 2025-11-22 04:07:19,248 | INFO     | collected zombie processes
[2025-11-21 23:08:08] 2025-11-22 04:07:19,248 | INFO     | will attempt to kill all subprocesses of pid=16118
[2025-11-21 23:08:08] 2025-11-22 04:07:19,346 | INFO     | process IDs to be killed: [16118] (in reverse order)
[2025-11-21 23:08:08] 2025-11-22 04:07:19,405 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 23:08:08] 2025-11-22 04:07:19,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 23:08:08] 2025-11-22 04:07:19,410 | INFO     | did not find any defunct processes belonging to 16118
[2025-11-21 23:08:08] 2025-11-22 04:07:19,414 | INFO     | did not find any defunct processes belonging to 16118
[2025-11-21 23:08:08] 2025-11-22 04:07:19,417 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 23:08:08] 2025-11-22 04:07:19,417 | INFO     | ready for new job
[2025-11-21 23:08:08] 2025-11-22 04:07:19,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 23:08:08] 2025-11-22 04:07:19,421 | INFO     | ***************************************
[2025-11-21 23:08:08] 2025-11-22 04:07:19,421 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 23:08:08] 2025-11-22 04:07:19,421 | INFO     | ***************************************
[2025-11-21 23:08:08] 2025-11-22 04:07:19,421 | INFO     | 
[2025-11-21 23:08:08] 2025-11-22 04:07:19,422 | INFO     | architecture information:
[2025-11-21 23:08:08] 2025-11-22 04:07:19,423 | INFO     | executing command: cat /etc/os-release
[2025-11-21 23:08:08] 2025-11-22 04:07:19,441 | INFO     | cat /etc/os-release:
[2025-11-21 23:08:08] NAME="CentOS Linux"
[2025-11-21 23:08:08] VERSION="7 (Core)"
[2025-11-21 23:08:08] ID="centos"
[2025-11-21 23:08:08] ID_LIKE="rhel fedora"
[2025-11-21 23:08:08] VERSION_ID="7"
[2025-11-21 23:08:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 23:08:08] ANSI_COLOR="0;31"
[2025-11-21 23:08:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 23:08:08] HOME_URL="https://www.centos.org/"
[2025-11-21 23:08:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 23:08:08] 
[2025-11-21 23:08:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 23:08:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 23:08:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 23:08:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 23:08:08] 
[2025-11-21 23:08:08] 2025-11-22 04:07:19,442 | INFO     | ***************************************
[2025-11-21 23:08:08] 2025-11-22 04:07:19,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 23:08:08] 2025-11-22 04:07:19,966 | INFO     | sufficient remaining disk space (17453547520 B)
[2025-11-21 23:08:08] 2025-11-22 04:07:19,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 23:08:08] 2025-11-22 04:07:19,967 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 23:08:08] 2025-11-22 04:07:19,967 | INFO     | update_server=False
[2025-11-21 23:08:08] 2025-11-22 04:07:19,968 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 23:08:08] 2025-11-22 04:07:19,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 23:08:08] 2025-11-22 04:07:19,968 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 23:08:08] 2025-11-22 04:07:19,969 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 23:08:08] 2025-11-22 04:07:19,969 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 23:08:08] 2025-11-22 04:07:19,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 23:08:08] 2025-11-22 04:07:19,970 | INFO     | will abort loop
[2025-11-21 23:08:08] 2025-11-22 04:07:20,186 | INFO     | all payload control threads have been joined
[2025-11-21 23:08:08] 2025-11-22 04:07:20,901 | INFO     | all data control threads have been joined
[2025-11-21 23:08:08] 2025-11-22 04:07:20,969 | INFO     | [job] queue monitor thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:20,973 | INFO     | [job] retrieve thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:20,975 | INFO     | [job] job monitor thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:21,015 | INFO     | [payload] validate_post thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:21,114 | INFO     | all job control threads have been joined
[2025-11-21 23:08:08] 2025-11-22 04:07:21,192 | INFO     | [payload] control thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:21,225 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:21,429 | INFO     | [job] validate thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:21,587 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:21,906 | INFO     | [data] control thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:21,974 | INFO     | [data] copytool_out thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:22,100 | INFO     | [payload] failed_post thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:22,115 | INFO     | [job] control thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:22,255 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:22,394 | INFO     | [data] copytool_in thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:22,437 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:22,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 23:08:08] 2025-11-22 04:07:26,848 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 23:08:08] 2025-11-22 04:07:49,755 | INFO     | PID=9635 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-21 23:08:08] 2025-11-22 04:07:49,756 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 23:08:08] 2025-11-22 04:07:49,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 23:08:08] 2025-11-22 04:07:49,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 23:08:08] 2025-11-22 04:08:01,694 | INFO     | [monitor] cgroup control has ended
[2025-11-21 23:08:08] 2025-11-22 04:08:02,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140656350373696)>', '<ExcThread(monitor, started 140655389034240)>']
[2025-11-21 23:08:08] 2025-11-22 04:08:02,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 23:08:08] 2025-11-22 04:08:02,820 | INFO     | [monitor] control thread has ended
[2025-11-21 23:08:08] 2025-11-22 04:08:07,642 | INFO     | all workflow threads have been joined
[2025-11-21 23:08:08] 2025-11-22 04:08:07,642 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 23:08:08] 2025-11-22 04:08:07,643 | INFO     | traces error code: 0
[2025-11-21 23:08:08] 2025-11-22 04:08:07,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 23:08:08] 2025-11-22 04:08:07,763 [wrapper] ==== pilot stdout END ====
[2025-11-21 23:08:08] 2025-11-22 04:08:07,767 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 23:08:08] 2025-11-22 04:08:07,772 [wrapper] pilotpid: 9635
[2025-11-21 23:08:08] 2025-11-22 04:08:07,777 [wrapper] Pilot exit status: 0
[2025-11-21 23:08:08] 2025-11-22 04:08:07,793 [wrapper] pandaids: 6894252282
[2025-11-21 23:08:08] 2025-11-22 04:08:07,846 [wrapper] cleanup supervisor_pilot 19104 9636
[2025-11-21 23:08:08] 2025-11-22 04:08:07,851 [wrapper] Test setup, not cleaning
[2025-11-21 23:08:08] 2025-11-22 04:08:07,856 [wrapper] apfmon messages muted
[2025-11-21 23:08:08] 2025-11-22 04:08:07,861 [wrapper] ==== wrapper stdout END ====
[2025-11-21 23:08:08] 2025-11-22 04:08:07,866 [wrapper] ==== wrapper stderr END ====
[2025-11-21 23:08:08]  *** Error codes and diagnostics ***
[2025-11-21 23:08:08]     "exeErrorCode": 0,
[2025-11-21 23:08:08]     "exeErrorDiag": "",
[2025-11-21 23:08:08]     "pilotErrorCode": 0,
[2025-11-21 23:08:08]     "pilotErrorDiag": "",
[2025-11-21 23:08:08]  *** Listing of results directory ***
[2025-11-21 23:08:08] total 1302396
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 20:54 pilot3.tar.gz
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 21:02 queuedata.json
[2025-11-21 23:08:08] -rwx------ 1 boincer umatlas     36292 Nov 20 21:03 runpilot2-wrapper.sh
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas       100 Nov 21 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 23:08:08] -rwxr-xr-x 1 boincer umatlas      7986 Nov 21 10:54 run_atlas
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas       105 Nov 21 10:54 job.xml
[2025-11-21 23:08:08] -rw-r--r-- 2 boincer umatlas 408172782 Nov 21 10:54 EVNT.47493127._002111.pool.root.1
[2025-11-21 23:08:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 10:54 start_atlas.sh
[2025-11-21 23:08:08] drwxrwx--x 2 boincer umatlas      4096 Nov 21 10:54 shared
[2025-11-21 23:08:08] -rw-r--r-- 2 boincer umatlas    590103 Nov 21 10:54 input.tar.gz
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas         0 Nov 21 10:54 boinc_lockfile
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas      2785 Nov 21 10:54 pandaJob.out
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas        57 Nov 21 10:54 setup.sh.local
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas    989798 Nov 21 10:54 agis_schedconf.cvmfs.json
[2025-11-21 23:08:08] drwx------ 5 boincer umatlas      4096 Nov 21 10:54 pilot3
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas       533 Nov 21 22:54 boinc_task_state.xml
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas      5912 Nov 21 23:04 init_data.xml
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas 905514951 Nov 21 23:06 HITS.47533967._000829.pool.root.1
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas      1063 Nov 21 23:06 memory_monitor_summary.json
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas   1526164 Nov 21 23:07 agis_ddmendpoints.agis.ALL.json
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas   1977081 Nov 21 23:07 log.47533967._000829.job.log.tgz.1
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas      8656 Nov 21 23:07 heartbeat.json
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas        95 Nov 21 23:07 pilot_heartbeat.json
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas        29 Nov 21 23:07 wrapper_checkpoint.txt
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 23:07 boinc_mmap_file
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas      4931 Nov 21 23:08 pilotlog.txt
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas   6045817 Nov 21 23:08 log.47533967._000829.job.log.1
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas       353 Nov 21 23:08 output.list
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas       620 Nov 21 23:08 runtime_log
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas   8038400 Nov 21 23:08 result.tar.gz
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas       668 Nov 21 23:08 UPEODmhfVg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbrIKDmMr2Pzm.diag
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas      9343 Nov 21 23:08 runtime_log.err
[2025-11-21 23:08:08] -rw-r--r-- 1 boincer umatlas     21276 Nov 21 23:08 stderr.txt
[2025-11-21 23:08:08] HITS file was successfully produced:
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas 905514951 Nov 21 23:06 shared/HITS.pool.root.1
[2025-11-21 23:08:08]  *** Contents of shared directory: ***
[2025-11-21 23:08:08] total 1291352
[2025-11-21 23:08:08] -rw-r--r-- 2 boincer umatlas 408172782 Nov 21 10:54 ATLAS.root_0
[2025-11-21 23:08:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 21 10:54 start_atlas.sh
[2025-11-21 23:08:08] -rw-r--r-- 2 boincer umatlas    590103 Nov 21 10:54 input.tar.gz
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas 905514951 Nov 21 23:06 HITS.pool.root.1
[2025-11-21 23:08:08] -rw------- 1 boincer umatlas   8038400 Nov 21 23:08 result.tar.gz
23:08:09 (5868): run_atlas exited; CPU time 338081.472588
23:08:09 (5868): called boinc_finish(0)

</stderr_txt>
]]>

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