Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-22 23:59:04 (110697): vboxwrapper version 26210
2025-11-22 23:59:04 (110697): BOINC client version: 8.2.2
2025-11-22 23:59:04 (110697): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-11-22 23:59:04 (110697): Successfully copied 'init_data.xml' to the shared directory.
2025-11-22 23:59:04 (110697): Create VM. (boinc_e54dce91c3edf6bf, slot#0)
2025-11-22 23:59:04 (110697): Setting Memory Size for VM. (4400MB)
2025-11-22 23:59:04 (110697): Setting CPU Count for VM. (4)
2025-11-22 23:59:04 (110697): Setting Chipset Options for VM.
2025-11-22 23:59:04 (110697): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-22 23:59:04 (110697): Setting Boot Options for VM.
2025-11-22 23:59:05 (110697): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-22 23:59:05 (110697): Enabling VM Network Access.
2025-11-22 23:59:05 (110697): Disabling USB Support for VM.
2025-11-22 23:59:05 (110697): Disabling COM Port Support for VM.
2025-11-22 23:59:05 (110697): Disabling LPT Port Support for VM.
2025-11-22 23:59:05 (110697): Disabling Audio Support for VM.
2025-11-22 23:59:05 (110697): Disabling Clipboard Support for VM.
2025-11-22 23:59:05 (110697): Disabling Drag and Drop Support for VM.
2025-11-22 23:59:05 (110697): Adding storage controller(s) to VM.
2025-11-22 23:59:05 (110697): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-22 23:59:05 (110697): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-22 23:59:05 (110697): forwarding host port 51581 to guest port 80
2025-11-22 23:59:05 (110697): Enabling remote desktop for VM.
2025-11-22 23:59:05 (110697): Enabling shared directory for VM.
2025-11-22 23:59:06 (110697): Starting VM using VBoxManage interface. (boinc_e54dce91c3edf6bf, slot#0)
2025-11-22 23:59:07 (110697): Successfully started VM. (PID = '110973')
2025-11-22 23:59:07 (110697): Reporting VM Process ID to BOINC.
2025-11-22 23:59:07 (110697): Guest Log: BIOS: VirtualBox 7.1.10
2025-11-22 23:59:07 (110697): Guest Log: CPUID EDX: 0x178bfbff
2025-11-22 23:59:07 (110697): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-22 23:59:07 (110697): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-22 23:59:07 (110697): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-22 23:59:07 (110697): Detected: Web Application Enabled (http://localhost:51581)
2025-11-22 23:59:07 (110697): Detected: Remote Desktop Enabled (localhost:58859)
2025-11-22 23:59:07 (110697): Preference change detected
2025-11-22 23:59:07 (110697): Setting CPU throttle for VM. (100%)
2025-11-22 23:59:07 (110697): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-22 23:59:09 (110697): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-22 23:59:09 (110697): Guest Log: BIOS: Booting from Hard Disk...
2025-11-22 23:59:12 (110697): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-22 23:59:12 (110697): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-22 23:59:12 (110697): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-22 23:59:17 (110697): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-22 23:59:17 (110697): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-22 23:59:23 (110697): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-22 23:59:23 (110697): Guest Log: 00:00:00.000462 main     Log opened 2025-11-22T22:59:22.490969000Z
2025-11-22 23:59:23 (110697): Guest Log: 00:00:00.000707 main     OS Product: Linux
2025-11-22 23:59:23 (110697): Guest Log: 00:00:00.000783 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-22 23:59:23 (110697): Guest Log: 00:00:00.000847 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-22 23:59:23 (110697): Guest Log: 00:00:00.000905 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-22 23:59:23 (110697): Guest Log: 00:00:00.000907 main     Process ID: 1307
2025-11-22 23:59:23 (110697): Guest Log: 00:00:00.000908 main     Package type: LINUX_64BITS_GENERIC
2025-11-22 23:59:23 (110697): Guest Log: 00:00:00.003953 main     5.2.32 r132073 started. Verbose level = 0
2025-11-22 23:59:23 (110697): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-22 23:59:23 (110697): Guest Log: [INFO] Mounting shared directory
2025-11-22 23:59:23 (110697): Guest Log: [INFO] Checking for init_data.xml
2025-11-22 23:59:30 (110697): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-22 23:59:30 (110697): Guest Log: [INFO] Detected branch: prod
2025-11-22 23:59:31 (110697): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-22 23:59:31 (110697): Guest Log: Copying input files
2025-11-22 23:59:33 (110697): Guest Log: Copied input files into RunAtlas.
2025-11-22 23:59:33 (110697): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-22 23:59:33 (110697): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-22 23:59:33 (110697): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-22 23:59:33 (110697): Guest Log: Further information can be found at the LHC@home message board.
2025-11-23 00:00:08 (110697): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-23 00:00:09 (110697): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-23 00:00:09 (110697): Guest Log: 2.6.3.0 1584 0 30184 153187 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-23 00:00:10 (110697): Guest Log: copied the webapp to /var/www
2025-11-23 00:00:10 (110697): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-23 00:00:10 (110697): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-23 00:00:10 (110697): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-23 00:00:11 (110697): Guest Log:  *** Starting ATLAS job. (PandaID=6894246219 taskID=47533967) ***
2025-11-23 01:38:07 (110697): Status Report: Elapsed Time: '6000.000000'
2025-11-23 01:38:07 (110697): Status Report: CPU Time: '22259.600000'
2025-11-23 03:17:07 (110697): Status Report: Elapsed Time: '12000.000000'
2025-11-23 03:17:07 (110697): Status Report: CPU Time: '45981.390000'
2025-11-23 04:56:08 (110697): Status Report: Elapsed Time: '18000.000000'
2025-11-23 04:56:08 (110697): Status Report: CPU Time: '69705.850000'
2025-11-23 06:35:08 (110697): Status Report: Elapsed Time: '24000.000000'
2025-11-23 06:35:08 (110697): Status Report: CPU Time: '93433.300000'
2025-11-23 08:14:09 (110697): Status Report: Elapsed Time: '30000.000000'
2025-11-23 08:14:09 (110697): Status Report: CPU Time: '117161.290000'
2025-11-23 09:53:09 (110697): Status Report: Elapsed Time: '36000.000000'
2025-11-23 09:53:09 (110697): Status Report: CPU Time: '140888.850000'
2025-11-23 11:32:09 (110697): Status Report: Elapsed Time: '42000.000000'
2025-11-23 11:32:09 (110697): Status Report: CPU Time: '164616.400000'
2025-11-23 13:11:10 (110697): Status Report: Elapsed Time: '48000.000000'
2025-11-23 13:11:10 (110697): Status Report: CPU Time: '188345.590000'
2025-11-23 14:50:10 (110697): Status Report: Elapsed Time: '54000.000000'
2025-11-23 14:50:10 (110697): Status Report: CPU Time: '212074.750000'
2025-11-23 16:29:11 (110697): Status Report: Elapsed Time: '60000.000000'
2025-11-23 16:29:11 (110697): Status Report: CPU Time: '235803.450000'
2025-11-23 16:55:27 (110697): Guest Log:  *** Job finished ***
2025-11-23 16:55:27 (110697): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:24,829 | INFO     | PID=5982 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:24,831 | INFO     | found 0 job(s) in 20 queues
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:24,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:24,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:24,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:24,831 | INFO     | [monitor] control thread has ended
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,227 | INFO     | all workflow threads have been joined
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,228 | INFO     | end of generic workflow (traces error code: 0)
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,228 | INFO     | traces error code: 0
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,366 [wrapper] ==== pilot stdout END ====
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,379 [wrapper] ==== wrapper stdout RESUME ====
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,392 [wrapper] pilotpid: 5982
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,405 [wrapper] Pilot exit status: 0
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,450 [wrapper] pandaids: 6894246219
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,531 [wrapper] cleanup supervisor_pilot 17177 5983
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,546 [wrapper] Test setup, not cleaning
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,559 [wrapper] apfmon messages muted
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,572 [wrapper] ==== wrapper stdout END ====
2025-11-23 16:55:27 (110697): Guest Log: 2025-11-23 15:55:25,585 [wrapper] ==== wrapper stderr END ====
2025-11-23 16:55:27 (110697): Guest Log:  *** Error codes and diagnostics ***
2025-11-23 16:55:27 (110697): Guest Log:     "exeErrorCode": 0,
2025-11-23 16:55:27 (110697): Guest Log:     "exeErrorDiag": "",
2025-11-23 16:55:27 (110697): Guest Log:     "pilotErrorCode": 0,
2025-11-23 16:55:27 (110697): Guest Log:     "pilotErrorDiag": "",
2025-11-23 16:55:27 (110697): Guest Log:  *** Listing of results directory ***
2025-11-23 16:55:27 (110697): Guest Log: total 914416
2025-11-23 16:55:27 (110697): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 01:08 pilot3.tar.gz
2025-11-23 16:55:27 (110697): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 01:36 queuedata.json
2025-11-23 16:55:27 (110697): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 01:38 runpilot2-wrapper.sh
2025-11-23 16:55:27 (110697): Guest Log: -rw-r--r--. 1 atlas atlas      5962 Nov 22 22:59 init_data.xml
2025-11-23 16:55:27 (110697): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 22 22:59 start_atlas.sh
2025-11-23 16:55:27 (110697): Guest Log: -rw-r--r--. 1 atlas atlas    590107 Nov 22 22:59 input.tar.gz
2025-11-23 16:55:27 (110697): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 22 22:59 EVNT.47493127._002092.pool.root.1 -> /data/./ATLAS.root_0
2025-11-23 16:55:27 (110697): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 22 23:00 pandaJob.out
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas    989784 Nov 22 23:01 agis_schedconf.cvmfs.json
2025-11-23 16:55:27 (110697): Guest Log: drwx------. 5 atlas atlas      4096 Nov 22 23:01 pilot3
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas 913877907 Nov 23 15:54 HITS.47533967._000635.pool.root.1
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas      1037 Nov 23 15:54 memory_monitor_summary.json
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 23 15:54 agis_ddmendpoints.agis.ALL.json
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas   1694392 Nov 23 15:54 log.47533967._000635.job.log.tgz.1
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas      8616 Nov 23 15:54 heartbeat.json
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas        95 Nov 23 15:55 pilot_heartbeat.json
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 23 15:55 pilotlog.txt
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas   7625621 Nov 23 15:55 log.47533967._000635.job.log.1
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas       353 Nov 23 15:55 output.list
2025-11-23 16:55:27 (110697): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 23 15:55 runtime_log
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas   9338880 Nov 23 15:55 result.tar.gz
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas       655 Nov 23 15:55 xUzNDmXHVg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9oIKDmjzlIVo.diag
2025-11-23 16:55:27 (110697): Guest Log: -rw-r--r--. 1 atlas atlas      8716 Nov 23 15:55 runtime_log.err
2025-11-23 16:55:27 (110697): Guest Log: Looking for outputfile HITS.47533967._000635.pool.root.1
2025-11-23 16:55:27 (110697): Guest Log: HITS file was successfully produced
2025-11-23 16:55:27 (110697): Guest Log: -rw-------. 1 atlas atlas 913877907 Nov 23 15:54 /home/atlas/RunAtlas/HITS.47533967._000635.pool.root.1
2025-11-23 16:55:28 (110697): Guest Log: Successfully finished the ATLAS job!
2025-11-23 16:55:28 (110697): Guest Log: Copying the results back to the shared directory!
2025-11-23 16:55:28 (110697): Guest Log:  *** Contents of shared directory: ***
2025-11-23 16:55:28 (110697): Guest Log: total 410136
2025-11-23 16:55:28 (110697): Guest Log: -rw-r--r--. 1 root root 410014877 Nov 22 22:59 ATLAS.root_0
2025-11-23 16:55:28 (110697): Guest Log: -rw-r--r--. 1 root root      5962 Nov 22 22:59 init_data.xml
2025-11-23 16:55:28 (110697): Guest Log: -rw-r--r--. 1 root root    590107 Nov 22 22:59 input.tar.gz
2025-11-23 16:55:28 (110697): Guest Log: -rw-r--r--. 1 root root   9338880 Nov 23 15:55 result.tar.gz
2025-11-23 16:55:28 (110697): Guest Log: -rw-r--r--. 1 root root     15847 Nov 22 22:59 start_atlas.sh
2025-11-23 16:55:28 (110697): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-23 16:55:28 (110697): VM Completion File Detected.
2025-11-23 16:55:28 (110697): Powering off VM.
2025-11-23 16:55:28 (110697): Successfully stopped VM.
2025-11-23 16:55:28 (110697): Deregistering VM. (boinc_e54dce91c3edf6bf, slot#0)
2025-11-23 16:55:28 (110697): Removing network bandwidth throttle group from VM.
2025-11-23 16:55:28 (110697): Removing VM from VirtualBox.
2025-11-23 16:55:33 (110697): called boinc_finish(0)

</stderr_txt>
]]>

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