Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:54:07 (3299589): wrapper (7.7.26015): starting
04:54:07 (3299589): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 04:54:07] Arguments: --nthreads 8
[2025-11-21 04:54:07] Threads: 8
[2025-11-21 04:54:07] Checking for CVMFS
[2025-11-21 04:54:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 04:54:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 04:54:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 04:54:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 04:54:08] 2.11.3.0 2934339 21195 208284 153128 2 148 26998122 45568000 16177 130560 0 139315773 99.803 85314676 27355 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-21 04:54:08] CVMFS is ok
[2025-11-21 04:54:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 04:54:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 04:54:08] Further information can be found at the LHC@home message board.
[2025-11-21 04:54:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 04:54:08] Checking for apptainer binary...
[2025-11-21 04:54:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 04:54:08] Running /usr/bin/apptainer --version
[2025-11-21 04:54:09] apptainer version 1.4.1-1.el9
[2025-11-21 04:54:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 04:54:10] wns0004.triumf.lcg
[2025-11-21 04:54:10] apptainer works
[2025-11-21 04:54:10] Set ATHENA_PROC_NUMBER=8
[2025-11-21 04:54:10] Set ATHENA_CORE_NUMBER=8
[2025-11-21 04:54:10] Starting ATLAS job with PandaID=6894268667
[2025-11-21 04:54:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 05:03:02]  *** The last 200 lines of the pilot log: ***
[2025-11-21 05:03:02] 2025-11-21 13:02:07,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 05:03:02] 2025-11-21 13:02:07,262 | WARNING  | wrong length of table data, x=[1763729762.0, 1763729823.0, 1763729884.0, 1763729945.0], y=[1368.0, 507651.0, 846342.0, 557782.0] (must be same and length>=4)
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | ..............................
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . Timing measurements:
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . get job = 0 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . initial setup = 5 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . payload setup = 12 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . stage-in = 0 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . payload execution = 252 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . stage-out = 0 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . log creation = 0 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | ..............................
[2025-11-21 05:03:02] 2025-11-21 13:02:07,264 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 05:03:02] 2025-11-21 13:02:07,264 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894268667/pilotlog.txt
[2025-11-21 05:03:02] 2025-11-21 13:02:07,275 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-21 05:03:02] - Log from pilotlog.txt -
[2025-11-21 05:03:02] 2025-11-21 13:02:07,259 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894268667/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 05:03:02] 2025-11-21 13:02:07,261 | INFO     | extracted standard info from prmon json
[2025-11-21 05:03:02] 2025-11-21 13:02:07,261 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 05:03:02] 2025-11-21 13:02:07,261 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 05:03:02] 2025-11-21 13:02:07,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 05:03:02] 2025-11-21 13:02:07,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 05:03:02] 2025-11-21 13:02:07,262 | WARNING  | wrong length of table data, x=[1763729762.0, 1763729823.0, 1763729884.0, 1763729945.0], y=[1368.0, 507651.0, 846342.0, 557782.0] (must be same and length>=4)
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | ..............................
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . Timing measurements:
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . get job = 0 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . initial setup = 5 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . payload setup = 12 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . stage-in = 0 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . payload execution = 252 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . stage-out = 0 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . log creation = 0 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | ..............................
[2025-11-21 05:03:02] 2025-11-21 13:02:07,264 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 05:03:02] 2025-11-21 13:02:07,264 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894268667/pilotlog.txt
[2025-11-21 05:03:02] 2025-11-21 13:02:07,275 | WARNING  | 
[2025-11-21 05:03:02] [begin log extracts]
[2025-11-21 05:03:02] - Log from pilotlog.txt -
[2025-11-21 05:03:02] 2025-11-21 13:02:07,259 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6894268667/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 05:03:02] 2025-11-21 13:02:07,261 | INFO     | extracted standard info from prmon json
[2025-11-21 05:03:02] 2025-11-21 13:02:07,261 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 05:03:02] 2025-11-21 13:02:07,261 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 05:03:02] 2025-11-21 13:02:07,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-21 05:03:02] 2025-11-21 13:02:07,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-21 05:03:02] 2025-11-21 13:02:07,262 | WARNING  | wrong length of table data, x=[1763729762.0, 1763729823.0, 1763729884.0, 1763729945.0], y=[1368.0, 507651.0, 846342.0, 557782.0] (must be same and length>=4)
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | ..............................
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . Timing measurements:
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . get job = 0 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . initial setup = 5 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . payload setup = 12 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . stage-in = 0 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . payload execution = 252 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . stage-out = 0 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | . log creation = 0 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,263 | INFO     | ..............................
[2025-11-21 05:03:02] 2025-11-21 13:02:07,264 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-21 05:03:02] 2025-11-21 13:02:07,264 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894268667/pilotlog.txt
[2025-11-21 05:03:02] [end log extracts]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,276 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-21 05:03:02] 2025-11-21 13:02:07,276 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-21 05:03:02] 2025-11-21 13:02:07,346 | INFO     | 
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | job summary report
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | --------------------------------------------------
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | PanDA job id: 6894268667
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | task id: 47533967
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-21 04:59:49,835 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | pilot state: failed 
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | transexitcode: 65
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | exeerrorcode: 65
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | exitcode: 65
[2025-11-21 05:03:02] 2025-11-21 13:02:07,347 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-21 05:03:02] 2025-11-21 13:02:07,348 | INFO     | cpuconsumptiontime: 51 s
[2025-11-21 05:03:02] 2025-11-21 13:02:07,348 | INFO     | nevents: 0
[2025-11-21 05:03:02] 2025-11-21 13:02:07,348 | INFO     | neventsw: 0
[2025-11-21 05:03:02] 2025-11-21 13:02:07,348 | INFO     | pid: 3310732
[2025-11-21 05:03:02] 2025-11-21 13:02:07,348 | INFO     | pgrp: 3310732
[2025-11-21 05:03:02] 2025-11-21 13:02:07,348 | INFO     | corecount: 8
[2025-11-21 05:03:02] 2025-11-21 13:02:07,348 | INFO     | event service: False
[2025-11-21 05:03:02] 2025-11-21 13:02:07,348 | INFO     | sizes: {0: 2298633, 1: 2298832, 12: 2298832, 13: 2299122, 22: 2299178, 269: 2324722, 270: 2324854, 271: 2329256, 396: 2329394}
[2025-11-21 05:03:02] 2025-11-21 13:02:07,348 | INFO     | --------------------------------------------------
[2025-11-21 05:03:02] 2025-11-21 13:02:07,348 | INFO     | 
[2025-11-21 05:03:02] 2025-11-21 13:02:07,348 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-21 05:03:02] 2025-11-21 13:02:07,379 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,380 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,380 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,380 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,380 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,380 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,380 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,380 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,380 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,380 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,380 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,380 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,381 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 05:03:02] 2025-11-21 13:02:07,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,381 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 05:03:02] 2025-11-21 13:02:07,381 | INFO     | job 6894268667 has completed (purged errors)
[2025-11-21 05:03:02] 2025-11-21 13:02:07,381 | INFO     | overall cleanup function is called
[2025-11-21 05:03:02] 2025-11-21 13:02:08,391 | INFO     | --- collectZombieJob: --- 10, [3310732]
[2025-11-21 05:03:02] 2025-11-21 13:02:08,391 | INFO     | zombie collector waiting for pid 3310732
[2025-11-21 05:03:02] 2025-11-21 13:02:08,391 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 05:03:02] 2025-11-21 13:02:08,391 | INFO     | collected zombie processes
[2025-11-21 05:03:02] 2025-11-21 13:02:08,392 | INFO     | will attempt to kill all subprocesses of pid=3310732
[2025-11-21 05:03:02] 2025-11-21 13:02:09,090 | INFO     | process IDs to be killed: [3310732] (in reverse order)
[2025-11-21 05:03:02] 2025-11-21 13:02:09,196 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 05:03:02] 2025-11-21 13:02:09,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 05:03:02] 2025-11-21 13:02:09,204 | INFO     | did not find any defunct processes belonging to 3310732
[2025-11-21 05:03:02] 2025-11-21 13:02:09,210 | INFO     | did not find any defunct processes belonging to 3310732
[2025-11-21 05:03:02] 2025-11-21 13:02:09,211 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 05:03:02] 2025-11-21 13:02:09,211 | INFO     | ready for new job
[2025-11-21 05:03:02] 2025-11-21 13:02:09,211 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 05:03:02] 2025-11-21 13:02:09,212 | INFO     | ***************************************
[2025-11-21 05:03:02] 2025-11-21 13:02:09,212 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 05:03:02] 2025-11-21 13:02:09,213 | INFO     | ***************************************
[2025-11-21 05:03:02] 2025-11-21 13:02:09,213 | INFO     | 
[2025-11-21 05:03:02] 2025-11-21 13:02:09,214 | INFO     | architecture information:
[2025-11-21 05:03:02] 2025-11-21 13:02:09,215 | INFO     | executing command: cat /etc/os-release
[2025-11-21 05:03:02] 2025-11-21 13:02:09,261 | INFO     | cat /etc/os-release:
[2025-11-21 05:03:02] NAME="CentOS Linux"
[2025-11-21 05:03:02] VERSION="7 (Core)"
[2025-11-21 05:03:02] ID="centos"
[2025-11-21 05:03:02] ID_LIKE="rhel fedora"
[2025-11-21 05:03:02] VERSION_ID="7"
[2025-11-21 05:03:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 05:03:02] ANSI_COLOR="0;31"
[2025-11-21 05:03:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 05:03:02] HOME_URL="https://www.centos.org/"
[2025-11-21 05:03:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 05:03:02] 
[2025-11-21 05:03:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 05:03:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 05:03:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 05:03:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 05:03:02] 
[2025-11-21 05:03:02] 2025-11-21 13:02:09,262 | INFO     | ***************************************
[2025-11-21 05:03:02] 2025-11-21 13:02:09,766 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-21 05:03:02] 2025-11-21 13:02:09,779 | INFO     | sufficient remaining disk space (1194404610048 B)
[2025-11-21 05:03:02] 2025-11-21 13:02:09,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 05:03:02] 2025-11-21 13:02:09,780 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 05:03:02] 2025-11-21 13:02:09,780 | INFO     | update_server=False
[2025-11-21 05:03:02] 2025-11-21 13:02:09,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 05:03:02] 2025-11-21 13:02:09,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 05:03:02] 2025-11-21 13:02:09,781 | INFO     | aborting loop
[2025-11-21 05:03:02] 2025-11-21 13:02:10,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 05:03:02] 2025-11-21 13:02:10,233 | INFO     | all payload control threads have been joined
[2025-11-21 05:03:02] 2025-11-21 13:02:10,398 | INFO     | all data control threads have been joined
[2025-11-21 05:03:02] 2025-11-21 13:02:10,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 05:03:02] 2025-11-21 13:02:10,741 | INFO     | all job control threads have been joined
[2025-11-21 05:03:02] 2025-11-21 13:02:10,786 | INFO     | [job] job monitor thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:10,794 | INFO     | [job] retrieve thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:10,874 | INFO     | [job] validate thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:11,090 | INFO     | [payload] validate_post thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:11,239 | INFO     | [payload] control thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:11,374 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:11,378 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:11,404 | INFO     | [data] control thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:11,460 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:11,747 | INFO     | [job] control thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:11,901 | INFO     | [data] copytool_in thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:12,061 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:12,081 | INFO     | [payload] failed_post thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:12,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 05:03:02] 2025-11-21 13:02:12,547 | INFO     | [data] copytool_out thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:13,377 | INFO     | [job] queue monitor thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:14,066 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 05:03:02] 2025-11-21 13:02:41,186 | INFO     | PID=3303587 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 05:03:02] 2025-11-21 13:02:41,186 | INFO     | .. there are 26 such processes running
[2025-11-21 05:03:02] 2025-11-21 13:02:41,186 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 05:03:02] 2025-11-21 13:02:41,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 05:03:02] 2025-11-21 13:02:41,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 05:03:02] 2025-11-21 13:02:57,048 | INFO     | [monitor] cgroup control has ended
[2025-11-21 05:03:02] 2025-11-21 13:02:57,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699012409152)>', '<ExcThread(monitor, started 139698173376256)>']
[2025-11-21 05:03:02] 2025-11-21 13:02:58,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 05:03:02] 2025-11-21 13:02:58,310 | INFO     | [monitor] control thread has ended
[2025-11-21 05:03:02] 2025-11-21 13:03:02,554 | INFO     | all workflow threads have been joined
[2025-11-21 05:03:02] 2025-11-21 13:03:02,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 05:03:02] 2025-11-21 13:03:02,555 | INFO     | traces error code: 0
[2025-11-21 05:03:02] 2025-11-21 13:03:02,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 05:03:02] 2025-11-21 13:03:02,772 [wrapper] ==== pilot stdout END ====
[2025-11-21 05:03:02] 2025-11-21 13:03:02,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 05:03:02] 2025-11-21 13:03:02,783 [wrapper] pilotpid: 3303587
[2025-11-21 05:03:02] 2025-11-21 13:03:02,786 [wrapper] Pilot exit status: 0
[2025-11-21 05:03:02] 2025-11-21 13:03:02,811 [wrapper] pandaids: 6894268667
[2025-11-21 05:03:02] 2025-11-21 13:03:02,862 [wrapper] cleanup supervisor_pilot 3303593 3303588
[2025-11-21 05:03:02] 2025-11-21 13:03:02,866 [wrapper] Test setup, not cleaning
[2025-11-21 05:03:02] 2025-11-21 13:03:02,869 [wrapper] apfmon messages muted
[2025-11-21 05:03:02] 2025-11-21 13:03:02,871 [wrapper] ==== wrapper stdout END ====
[2025-11-21 05:03:02] 2025-11-21 13:03:02,873 [wrapper] ==== wrapper stderr END ====
[2025-11-21 05:03:02]  *** Error codes and diagnostics ***
[2025-11-21 05:03:02]     "exeErrorCode": 65,
[2025-11-21 05:03:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-21 05:03:02]     "pilotErrorCode": 1305,
[2025-11-21 05:03:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-21 05:03:02]  *** Listing of results directory ***
[2025-11-21 05:03:02] total 403848
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc    576529 Nov 20 22:04 pilot3.tar.gz
[2025-11-21 05:03:02] -rwx------. 1 boinc boinc     36292 Nov 20 22:05 runpilot2-wrapper.sh
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc      5112 Nov 20 22:05 queuedata.json
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc       100 Nov 21 04:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 05:03:02] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 04:54 run_atlas
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc       105 Nov 21 04:54 job.xml
[2025-11-21 05:03:02] -rw-r--r--. 2 boinc boinc 409274643 Nov 21 04:54 EVNT.47493127._002275.pool.root.1
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc      6444 Nov 21 04:54 init_data.xml
[2025-11-21 05:03:02] -rw-r--r--. 2 boinc boinc     15847 Nov 21 04:54 start_atlas.sh
[2025-11-21 05:03:02] drwxrwx--x. 2 boinc boinc      4096 Nov 21 04:54 shared
[2025-11-21 05:03:02] -rw-r--r--. 2 boinc boinc    590098 Nov 21 04:54 input.tar.gz
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc         0 Nov 21 04:54 boinc_lockfile
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc      2786 Nov 21 04:54 pandaJob.out
[2025-11-21 05:03:02] -rw-------. 1 boinc boinc    989817 Nov 21 04:54 agis_schedconf.cvmfs.json
[2025-11-21 05:03:02] -rw-------. 1 boinc boinc   1526164 Nov 21 04:54 agis_ddmendpoints.agis.ALL.json
[2025-11-21 05:03:02] drwx------. 5 boinc boinc      4096 Nov 21 04:54 pilot3
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc       525 Nov 21 04:59 boinc_task_state.xml
[2025-11-21 05:03:02] -rw-------. 1 boinc boinc       997 Nov 21 04:59 memory_monitor_summary.json
[2025-11-21 05:03:02] -rw-------. 1 boinc boinc     52618 Nov 21 05:00 log.47533967._002462.job.log.tgz.1
[2025-11-21 05:03:02] -rw-------. 1 boinc boinc        95 Nov 21 05:01 pilot_heartbeat.json
[2025-11-21 05:03:02] -rw-------. 1 boinc boinc     10332 Nov 21 05:02 heartbeat.json
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc        23 Nov 21 05:03 wrapper_checkpoint.txt
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc      8192 Nov 21 05:03 boinc_mmap_file
[2025-11-21 05:03:02] -rw-------. 1 boinc boinc      4823 Nov 21 05:03 pilotlog.txt
[2025-11-21 05:03:02] -rw-------. 1 boinc boinc    119372 Nov 21 05:03 log.47533967._002462.job.log.1
[2025-11-21 05:03:02] -rw-------. 1 boinc boinc       186 Nov 21 05:03 output.list
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc       620 Nov 21 05:03 runtime_log
[2025-11-21 05:03:02] -rw-------. 1 boinc boinc    194560 Nov 21 05:03 result.tar.gz
[2025-11-21 05:03:02] -rw-------. 1 boinc boinc       647 Nov 21 05:03 UkSLDmHSZg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2OHKDmbw2UDo.diag
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc      8634 Nov 21 05:03 runtime_log.err
[2025-11-21 05:03:02] -rw-r--r--. 1 boinc boinc     21922 Nov 21 05:03 stderr.txt
[2025-11-21 05:03:02] No HITS result produced
[2025-11-21 05:03:02]  *** Contents of shared directory: ***
[2025-11-21 05:03:02] total 400476
[2025-11-21 05:03:02] -rw-r--r--. 2 boinc boinc 409274643 Nov 21 04:54 ATLAS.root_0
[2025-11-21 05:03:02] -rw-r--r--. 2 boinc boinc     15847 Nov 21 04:54 start_atlas.sh
[2025-11-21 05:03:02] -rw-r--r--. 2 boinc boinc    590098 Nov 21 04:54 input.tar.gz
[2025-11-21 05:03:02] -rw-------. 1 boinc boinc    194560 Nov 21 05:03 result.tar.gz
05:03:04 (3299589): run_atlas exited; CPU time 57.486671
05:03:04 (3299589): called boinc_finish(0)

</stderr_txt>
]]>

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