Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:29:13 (7011): wrapper (7.7.26015): starting
00:29:13 (7011): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:29:13] Arguments: --nthreads 8
[2025-11-24 00:29:13] Threads: 8
[2025-11-24 00:29:13] Checking for CVMFS
[2025-11-24 00:29:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:29:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:29:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:29:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:29:14] 2.11.2.0 6477 281564 143496 153226 3 128 17955025 25165825 4345 130560 13 129258551 99.872 76201456 2767 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 00:29:14] CVMFS is ok
[2025-11-24 00:29:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:29:14] Checking for apptainer binary...
[2025-11-24 00:29:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:29:14] Running /usr/bin/apptainer --version
[2025-11-24 00:29:14] apptainer version 1.3.2-1.el7
[2025-11-24 00:29:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:29:17] cg-vwn261.simple-grid.lan
[2025-11-24 00:29:17] apptainer works
[2025-11-24 00:29:17] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:29:17] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:29:17] Starting ATLAS job with PandaID=6893878711
[2025-11-24 00:29:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:23:49]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:23:49] 2025-11-24 21:22:34,464 | INFO     | monitor loop #5288: job 0:6893878711 is in state 'finished'
[2025-11-24 22:23:49] 2025-11-24 21:22:34,464 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:23:49] 2025-11-24 21:22:34,824 | INFO     | time since job start (78673s) is within the limit (172800.0s)
[2025-11-24 22:23:49] 2025-11-24 21:22:36,833 | INFO     | time since job start (78675s) is within the limit (172800.0s)
[2025-11-24 22:23:49] 2025-11-24 21:22:36,969 | INFO     | monitor loop #5289: job 0:6893878711 is in state 'finished'
[2025-11-24 22:23:49] 2025-11-24 21:22:36,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:23:49] 2025-11-24 21:22:37,979 | INFO     | PID=11004 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 22:23:49] 2025-11-24 21:22:37,979 | INFO     | .. there are 2 such processes running
[2025-11-24 22:23:49] 2025-11-24 21:22:38,979 | INFO     | time since job start (78677s) is within the limit (172800.0s)
[2025-11-24 22:23:49] 2025-11-24 21:22:39,484 | INFO     | monitor loop #5290: job 0:6893878711 is in state 'finished'
[2025-11-24 22:23:49] 2025-11-24 21:22:39,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:23:49] 2025-11-24 21:22:40,986 | INFO     | time since job start (78679s) is within the limit (172800.0s)
[2025-11-24 22:23:49] 2025-11-24 21:22:41,997 | INFO     | monitor loop #5291: job 0:6893878711 is in state 'finished'
[2025-11-24 22:23:49] 2025-11-24 21:22:41,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:23:49] 2025-11-24 21:22:42,993 | INFO     | time since job start (78681s) is within the limit (172800.0s)
[2025-11-24 22:23:49] 2025-11-24 21:22:44,090 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 22:23:49] 2025-11-24 21:22:44,092 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 22:23:49] 2025-11-24 21:22:44,093 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6893878711/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:23:49] 2025-11-24 21:22:44,094 | INFO     | extracted standard info from prmon json
[2025-11-24 22:23:49] 2025-11-24 21:22:44,094 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:23:49] 2025-11-24 21:22:44,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:23:49] 2025-11-24 21:22:44,131 | INFO     | fitting pss+swap vs Time
[2025-11-24 22:23:49] 2025-11-24 21:22:44,134 | INFO     | sum of square deviations: 656399628147.2024
[2025-11-24 22:23:49] 2025-11-24 21:22:44,224 | INFO     | sum of deviations: 1351444838170.2068
[2025-11-24 22:23:49] 2025-11-24 21:22:44,224 | INFO     | mean x: 1763980109.6417446
[2025-11-24 22:23:49] 2025-11-24 21:22:44,224 | INFO     | mean y: 2827683.496105919
[2025-11-24 22:23:49] 2025-11-24 21:22:44,224 | INFO     | intersect: -3628987009.2380576
[2025-11-24 22:23:49] 2025-11-24 21:22:44,226 | INFO     | chi2: 23.18757253899127
[2025-11-24 22:23:49] 2025-11-24 21:22:44,228 | INFO     | sum of square deviations: 648761587865.6599
[2025-11-24 22:23:49] 2025-11-24 21:22:44,274 | INFO     | sum of deviations: 1804816546895.5251
[2025-11-24 22:23:49] 2025-11-24 21:22:44,275 | INFO     | mean x: 1763979957.146208
[2025-11-24 22:23:49] 2025-11-24 21:22:44,275 | INFO     | mean y: 2836733.2431587176
[2025-11-24 22:23:49] 2025-11-24 21:22:44,275 | INFO     | intersect: -4904451667.605846
[2025-11-24 22:23:49] 2025-11-24 21:22:44,277 | INFO     | chi2: 19.321855144269207
[2025-11-24 22:23:49] 2025-11-24 21:22:44,277 | INFO     | current chi2=19.321855144269207 (change=16.67150534287981 %)
[2025-11-24 22:23:49] 2025-11-24 21:22:44,277 | INFO     | right removable region: 1278
[2025-11-24 22:23:49] 2025-11-24 21:22:44,279 | INFO     | sum of square deviations: 648760693605.659
[2025-11-24 22:23:49] 2025-11-24 21:22:44,337 | INFO     | sum of deviations: 940809418956.611
[2025-11-24 22:23:49] 2025-11-24 21:22:44,337 | INFO     | mean x: 1763980262.146208
[2025-11-24 22:23:49] 2025-11-24 21:22:44,337 | INFO     | mean y: 2835878.0234558247
[2025-11-24 22:23:49] 2025-11-24 21:22:44,337 | INFO     | intersect: -2555224839.6461205
[2025-11-24 22:23:49] 2025-11-24 21:22:44,339 | INFO     | chi2: 20.53372701549386
[2025-11-24 22:23:49] 2025-11-24 21:22:44,339 | INFO     | current chi2=20.53372701549386 (change=11.44512009195793 %)
[2025-11-24 22:23:49] 2025-11-24 21:22:44,339 | INFO     | left removable region: 10
[2025-11-24 22:23:49] 2025-11-24 21:22:44,341 | INFO     | sum of square deviations: 632165806644.5305
[2025-11-24 22:23:49] 2025-11-24 21:22:44,402 | INFO     | sum of deviations: 1355381481959.133
[2025-11-24 22:23:49] 2025-11-24 21:22:44,403 | INFO     | mean x: 1763980231.6498423
[2025-11-24 22:23:49] 2025-11-24 21:22:44,403 | INFO     | mean y: 2849281.1782334386
[2025-11-24 22:23:49] 2025-11-24 21:22:44,403 | INFO     | intersect: -3779174541.354408
[2025-11-24 22:23:49] 2025-11-24 21:22:44,405 | INFO     | chi2: 15.689183220770799
[2025-11-24 22:23:49] 2025-11-24 21:22:44,405 | INFO     | current memory leak: 2.14 B/s (using 1268 data points, chi2=15.69)
[2025-11-24 22:23:49] 2025-11-24 21:22:44,406 | INFO     | could have reported an average CPU frequency of 1999 MHz (43 samples)
[2025-11-24 22:23:49] 2025-11-24 21:22:44,406 | INFO     | ..............................
[2025-11-24 22:23:49] 2025-11-24 21:22:44,406 | INFO     | . Timing measurements:
[2025-11-24 22:23:49] 2025-11-24 21:22:44,407 | INFO     | . get job = 0 s
[2025-11-24 22:23:49] 2025-11-24 21:22:44,407 | INFO     | . initial setup = 4 s
[2025-11-24 22:23:49] 2025-11-24 21:22:44,407 | INFO     | . payload setup = 101 s
[2025-11-24 22:23:49] 2025-11-24 21:22:44,407 | INFO     | . stage-in = 0 s
[2025-11-24 22:23:49] 2025-11-24 21:22:44,407 | INFO     | . payload execution = 78333 s
[2025-11-24 22:23:49] 2025-11-24 21:22:44,407 | INFO     | . stage-out = 5 s
[2025-11-24 22:23:49] 2025-11-24 21:22:44,407 | INFO     | . log creation = 2 s
[2025-11-24 22:23:49] 2025-11-24 21:22:44,407 | INFO     | ..............................
[2025-11-24 22:23:49] 2025-11-24 21:22:45,000 | INFO     | time since job start (78684s) is within the limit (172800.0s)
[2025-11-24 22:23:49] 2025-11-24 21:22:45,016 | INFO     | 
[2025-11-24 22:23:49] 2025-11-24 21:22:45,016 | INFO     | job summary report
[2025-11-24 22:23:49] 2025-11-24 21:22:45,017 | INFO     | --------------------------------------------------
[2025-11-24 22:23:49] 2025-11-24 21:22:45,017 | INFO     | PanDA job id: 6893878711
[2025-11-24 22:23:49] 2025-11-24 21:22:45,017 | INFO     | task id: 47523449
[2025-11-24 22:23:49] 2025-11-24 21:22:45,017 | INFO     | errors: (none)
[2025-11-24 22:23:49] 2025-11-24 21:22:45,017 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:23:49] 2025-11-24 21:22:45,017 | INFO     | pilot state: finished 
[2025-11-24 22:23:49] 2025-11-24 21:22:45,017 | INFO     | transexitcode: 0
[2025-11-24 22:23:49] 2025-11-24 21:22:45,017 | INFO     | exeerrorcode: 0
[2025-11-24 22:23:49] 2025-11-24 21:22:45,017 | INFO     | exeerrordiag: 
[2025-11-24 22:23:49] 2025-11-24 21:22:45,017 | INFO     | exitcode: 0
[2025-11-24 22:23:49] 2025-11-24 21:22:45,017 | INFO     | exitmsg: OK
[2025-11-24 22:23:49] 2025-11-24 21:22:45,017 | INFO     | cpuconsumptiontime: 338587 s
[2025-11-24 22:23:49] 2025-11-24 21:22:45,018 | INFO     | nevents: 1000
[2025-11-24 22:23:49] 2025-11-24 21:22:45,018 | INFO     | neventsw: 0
[2025-11-24 22:23:49] 2025-11-24 21:22:45,018 | INFO     | pid: 17870
[2025-11-24 22:23:49] 2025-11-24 21:22:45,018 | INFO     | pgrp: 17870
[2025-11-24 22:23:49] 2025-11-24 21:22:45,018 | INFO     | corecount: 8
[2025-11-24 22:23:49] 2025-11-24 21:22:45,018 | INFO     | event service: False
[2025-11-24 22:23:49] 2025-11-24 21:22:45,018 | INFO     | sizes: {0: 2298756, 1: 2298756, 12: 2298784, 22: 2298812, 33: 2298840, 44: 2298896, 55: 2299052, 61: 2299342, 65: 2299370, 78439: 2358062, 78445: 2367847, 78446: 2
[2025-11-24 22:23:49] 2025-11-24 21:22:45,018 | INFO     | --------------------------------------------------
[2025-11-24 22:23:49] 2025-11-24 21:22:45,018 | INFO     | 
[2025-11-24 22:23:49] 2025-11-24 21:22:45,018 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-24 22:23:49] 2025-11-24 21:22:45,645 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,645 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,645 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,646 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,646 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,646 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,646 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,646 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,646 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,646 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,646 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,646 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,647 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,647 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,647 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,647 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,647 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,647 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:23:49] 2025-11-24 21:22:45,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,647 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:23:49] 2025-11-24 21:22:45,647 | INFO     | job 6893878711 has completed (purged errors)
[2025-11-24 22:23:49] 2025-11-24 21:22:45,648 | INFO     | overall cleanup function is called
[2025-11-24 22:23:49] 2025-11-24 21:22:46,666 | INFO     | --- collectZombieJob: --- 10, [17870]
[2025-11-24 22:23:49] 2025-11-24 21:22:46,666 | INFO     | zombie collector waiting for pid 17870
[2025-11-24 22:23:49] 2025-11-24 21:22:46,667 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:23:49] 2025-11-24 21:22:46,667 | INFO     | collected zombie processes
[2025-11-24 22:23:49] 2025-11-24 21:22:46,667 | INFO     | will attempt to kill all subprocesses of pid=17870
[2025-11-24 22:23:49] 2025-11-24 21:22:46,758 | INFO     | process IDs to be killed: [17870] (in reverse order)
[2025-11-24 22:23:49] 2025-11-24 21:22:47,636 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:23:49] 2025-11-24 21:22:47,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:23:49] 2025-11-24 21:22:47,638 | INFO     | did not find any defunct processes belonging to 17870
[2025-11-24 22:23:49] 2025-11-24 21:22:47,640 | INFO     | did not find any defunct processes belonging to 17870
[2025-11-24 22:23:49] 2025-11-24 21:22:47,683 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:23:49] 2025-11-24 21:22:47,684 | INFO     | ready for new job
[2025-11-24 22:23:49] 2025-11-24 21:22:47,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:23:49] 2025-11-24 21:22:47,689 | INFO     | ***************************************
[2025-11-24 22:23:49] 2025-11-24 21:22:47,689 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:23:49] 2025-11-24 21:22:47,689 | INFO     | ***************************************
[2025-11-24 22:23:49] 2025-11-24 21:22:47,689 | INFO     | 
[2025-11-24 22:23:49] 2025-11-24 21:22:47,690 | INFO     | pilot is running in a VM
[2025-11-24 22:23:49] 2025-11-24 21:22:47,690 | INFO     | architecture information:
[2025-11-24 22:23:49] 2025-11-24 21:22:47,697 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:23:49] 2025-11-24 21:22:47,958 | INFO     | cat /etc/os-release:
[2025-11-24 22:23:49] NAME="CentOS Linux"
[2025-11-24 22:23:49] VERSION="7 (Core)"
[2025-11-24 22:23:49] ID="centos"
[2025-11-24 22:23:49] ID_LIKE="rhel fedora"
[2025-11-24 22:23:49] VERSION_ID="7"
[2025-11-24 22:23:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:23:49] ANSI_COLOR="0;31"
[2025-11-24 22:23:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:23:49] HOME_URL="https://www.centos.org/"
[2025-11-24 22:23:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:23:49] 
[2025-11-24 22:23:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:23:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:23:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:23:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:23:49] 
[2025-11-24 22:23:49] 2025-11-24 21:22:47,958 | INFO     | ***************************************
[2025-11-24 22:23:49] 2025-11-24 21:22:48,461 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-24 22:23:49] 2025-11-24 21:22:48,763 | INFO     | sufficient remaining disk space (493438894080 B)
[2025-11-24 22:23:49] 2025-11-24 21:22:48,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:23:49] 2025-11-24 21:22:48,763 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:23:49] 2025-11-24 21:22:48,764 | INFO     | update_server=False
[2025-11-24 22:23:49] 2025-11-24 21:22:48,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:23:49] 2025-11-24 21:22:48,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:23:49] 2025-11-24 21:22:48,765 | INFO     | aborting loop
[2025-11-24 22:23:49] 2025-11-24 21:22:49,098 | INFO     | all payload control threads have been joined
[2025-11-24 22:23:49] 2025-11-24 21:22:49,388 | INFO     | all data control threads have been joined
[2025-11-24 22:23:49] 2025-11-24 21:22:49,526 | INFO     | all job control threads have been joined
[2025-11-24 22:23:49] 2025-11-24 21:22:49,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:23:49] 2025-11-24 21:22:49,769 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:49,770 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:50,048 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:50,074 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:50,101 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:50,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:23:49] 2025-11-24 21:22:50,107 | INFO     | [payload] control thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:50,394 | INFO     | [data] control thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:50,420 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:50,532 | INFO     | [job] control thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:50,571 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:50,616 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:50,668 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:50,978 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:51,048 | INFO     | [job] validate thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:51,648 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:23:49] 2025-11-24 21:22:52,111 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:22:55,657 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:23:49] 2025-11-24 21:23:18,151 | INFO     | PID=11004 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 22:23:49] 2025-11-24 21:23:18,151 | INFO     | .. there are 2 such processes running
[2025-11-24 22:23:49] 2025-11-24 21:23:18,153 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:23:49] 2025-11-24 21:23:18,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:23:49] 2025-11-24 21:23:18,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:23:49] 2025-11-24 21:23:38,043 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:23:49] 2025-11-24 21:23:39,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140403909183296)>', '<ExcThread(monitor, started 140403462358784)>']
[2025-11-24 22:23:49] 2025-11-24 21:23:40,284 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:23:49] 2025-11-24 21:23:40,284 | INFO     | [monitor] control thread has ended
[2025-11-24 22:23:49] 2025-11-24 21:23:44,737 | INFO     | all workflow threads have been joined
[2025-11-24 22:23:49] 2025-11-24 21:23:44,737 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:23:49] 2025-11-24 21:23:44,738 | INFO     | traces error code: 0
[2025-11-24 22:23:49] 2025-11-24 21:23:44,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:23:49] 2025-11-24 21:23:45,081 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:23:49] 2025-11-24 21:23:45,169 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:23:49] 2025-11-24 21:23:45,249 [wrapper] pilotpid: 11004
[2025-11-24 22:23:49] 2025-11-24 21:23:45,317 [wrapper] Pilot exit status: 0
[2025-11-24 22:23:49] 2025-11-24 21:23:45,765 [wrapper] pandaids: 6893878711
[2025-11-24 22:23:49] 2025-11-24 21:23:45,978 [wrapper] cleanup supervisor_pilot 28799 11005
[2025-11-24 22:23:49] 2025-11-24 21:23:46,128 [wrapper] Test setup, not cleaning
[2025-11-24 22:23:49] 2025-11-24 21:23:46,290 [wrapper] apfmon messages muted
[2025-11-24 22:23:49] 2025-11-24 21:23:46,397 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:23:49] 2025-11-24 21:23:46,524 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:23:49]  *** Error codes and diagnostics ***
[2025-11-24 22:23:49]     "exeErrorCode": 0,
[2025-11-24 22:23:49]     "exeErrorDiag": "",
[2025-11-24 22:23:49]     "pilotErrorCode": 0,
[2025-11-24 22:23:49]     "pilotErrorDiag": "",
[2025-11-24 22:23:49]  *** Listing of results directory ***
[2025-11-24 22:23:49] total 1325032
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc    576529 Nov 20 19:04 pilot3.tar.gz
[2025-11-24 22:23:49] -rwx------. 1 boinc boinc     36292 Nov 20 19:58 runpilot2-wrapper.sh
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc      5112 Nov 20 19:58 queuedata.json
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc       100 Nov 24 00:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:23:49] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 00:29 run_atlas
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc       105 Nov 24 00:29 job.xml
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc      6391 Nov 24 00:29 init_data.xml
[2025-11-24 22:23:49] -rw-r--r--. 2 boinc boinc 410124524 Nov 24 00:29 EVNT.47493127._000813.pool.root.1
[2025-11-24 22:23:49] -rw-r--r--. 2 boinc boinc     15847 Nov 24 00:29 start_atlas.sh
[2025-11-24 22:23:49] drwxrwx--x. 2 boinc boinc        68 Nov 24 00:29 shared
[2025-11-24 22:23:49] -rw-r--r--. 2 boinc boinc    590099 Nov 24 00:29 input.tar.gz
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc         0 Nov 24 00:29 boinc_lockfile
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc      2785 Nov 24 00:29 pandaJob.out
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc    989786 Nov 24 00:31 agis_schedconf.cvmfs.json
[2025-11-24 22:23:49] drwx------. 5 boinc boinc      4096 Nov 24 00:31 pilot3
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc       533 Nov 24 21:49 boinc_task_state.xml
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc 917058710 Nov 24 22:19 HITS.47523449._008122.pool.root.1
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc      1033 Nov 24 22:20 memory_monitor_summary.json
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc   1516227 Nov 24 22:20 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc   2401481 Nov 24 22:20 log.47523449._008122.job.log.tgz.1
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc      8640 Nov 24 22:22 heartbeat.json
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc        95 Nov 24 22:23 pilot_heartbeat.json
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc      8192 Nov 24 22:23 boinc_mmap_file
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc        29 Nov 24 22:23 wrapper_checkpoint.txt
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc      4884 Nov 24 22:23 pilotlog.txt
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc  10467509 Nov 24 22:23 log.47523449._008122.job.log.1
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc       353 Nov 24 22:23 output.list
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc       620 Nov 24 22:23 runtime_log
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc  12892160 Nov 24 22:23 result.tar.gz
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc      8817 Nov 24 22:23 runtime_log.err
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc       662 Nov 24 22:23 5uqNDmO2Og8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFQIKDmhuAs4m.diag
[2025-11-24 22:23:49] -rw-r--r--. 1 boinc boinc     21500 Nov 24 22:23 stderr.txt
[2025-11-24 22:23:49] HITS file was successfully produced:
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc 917058710 Nov 24 22:19 shared/HITS.pool.root.1
[2025-11-24 22:23:49]  *** Contents of shared directory: ***
[2025-11-24 22:23:49] total 1309272
[2025-11-24 22:23:49] -rw-r--r--. 2 boinc boinc 410124524 Nov 24 00:29 ATLAS.root_0
[2025-11-24 22:23:49] -rw-r--r--. 2 boinc boinc     15847 Nov 24 00:29 start_atlas.sh
[2025-11-24 22:23:49] -rw-r--r--. 2 boinc boinc    590099 Nov 24 00:29 input.tar.gz
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc 917058710 Nov 24 22:19 HITS.pool.root.1
[2025-11-24 22:23:49] -rw-------. 1 boinc boinc  12892160 Nov 24 22:23 result.tar.gz
22:23:50 (7011): run_atlas exited; CPU time 338817.052358
22:23:50 (7011): called boinc_finish(0)

</stderr_txt>
]]>

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