Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:22:19 (3810821): wrapper (7.7.26015): starting
03:22:19 (3810821): wrapper: running run_atlas (--nthreads 3)
[2025-11-21 03:22:19] Arguments: --nthreads 3
[2025-11-21 03:22:19] Threads: 3
[2025-11-21 03:22:19] Checking for CVMFS
[2025-11-21 03:22:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 03:22:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 03:22:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 03:22:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 03:22:19] 2.9.2.0 16720 809 69876 153103 0 88 34446427 36864000 0 130560 0 11400981 99.999 16513 713 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-21 03:22:19] CVMFS is ok
[2025-11-21 03:22:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 03:22:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 03:22:19] Further information can be found at the LHC@home message board.
[2025-11-21 03:22:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 03:22:19] Checking for apptainer binary...
[2025-11-21 03:22:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 03:22:19] Running /usr/bin/apptainer --version
[2025-11-21 03:22:19] apptainer version 1.4.1-1.1
[2025-11-21 03:22:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 03:22:19] thA335
[2025-11-21 03:22:19] apptainer works
[2025-11-21 03:22:19] Set ATHENA_PROC_NUMBER=3
[2025-11-21 03:22:19] Set ATHENA_CORE_NUMBER=3
[2025-11-21 03:22:19] Starting ATLAS job with PandaID=6893871895
[2025-11-21 03:22:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 03:26:38]  *** The last 200 lines of the pilot log: ***
[2025-11-21 03:26:38] 2025-11-21 02:25:45,374 | INFO     | sufficient remaining disk space (827192246272 B)
[2025-11-21 03:26:38] 2025-11-21 02:25:45,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 03:26:38] 2025-11-21 02:25:45,374 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 03:26:38] 2025-11-21 02:25:45,374 | INFO     | update_server=False
[2025-11-21 03:26:38] 2025-11-21 02:25:45,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 03:26:38] 2025-11-21 02:25:45,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 03:26:38] 2025-11-21 02:25:45,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 03:26:38] 2025-11-21 02:25:45,374 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-21 03:26:38] 2025-11-21 02:25:45,375 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 03:26:38] 2025-11-21 02:25:45,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 03:26:38] 2025-11-21 02:25:45,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 03:26:38] 2025-11-21 02:25:45,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 03:26:38] 2025-11-21 02:25:45,599 | INFO     | aborting loop
[2025-11-21 03:26:38] 2025-11-21 02:25:46,031 | INFO     | all payload control threads have been joined
[2025-11-21 03:26:38] 2025-11-21 02:25:46,125 | INFO     | all data control threads have been joined
[2025-11-21 03:26:38] 2025-11-21 02:25:46,380 | INFO     | [job] queue monitor thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:46,380 | INFO     | [job] retrieve thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:46,415 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 03:26:38] 2025-11-21 02:25:46,417 | INFO     | all job control threads have been joined
[2025-11-21 03:26:38] 2025-11-21 02:25:46,559 | INFO     | [payload] validate_post thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:46,605 | INFO     | [job] job monitor thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:46,918 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:47,034 | INFO     | [job] validate thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:47,037 | INFO     | [payload] control thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:47,106 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:47,132 | INFO     | [data] control thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:47,180 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:47,255 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:47,262 | INFO     | [data] copytool_in thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:47,423 | INFO     | [job] control thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:47,734 | INFO     | [payload] failed_post thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:48,421 | INFO     | [data] copytool_out thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:25:49,382 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 03:26:38] 2025-11-21 02:26:31,910 | INFO     | [monitor] cgroup control has ended
[2025-11-21 03:26:38] 2025-11-21 02:26:32,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140427211274048)>', '<ExcThread(monitor, started 140426463913728)>']
[2025-11-21 03:26:38] 2025-11-21 02:26:33,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 03:26:38] 2025-11-21 02:26:33,632 | INFO     | [monitor] control thread has ended
[2025-11-21 03:26:38] 2025-11-21 02:26:37,909 | INFO     | all workflow threads have been joined
[2025-11-21 03:26:38] 2025-11-21 02:26:37,916 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 03:26:38] 2025-11-21 02:26:37,916 | INFO     | traces error code: 0
[2025-11-21 03:26:38] 2025-11-21 02:26:37,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 03:26:38] 2025-11-21 02:26:37,963 [wrapper] ==== pilot stdout END ====
[2025-11-21 03:26:38] 2025-11-21 02:26:37,967 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 03:26:38] 2025-11-21 02:26:37,970 [wrapper] pilotpid: 3814554
[2025-11-21 03:26:38] 2025-11-21 02:26:37,972 [wrapper] Pilot exit status: 0
[2025-11-21 03:26:38] 2025-11-21 02:26:37,979 [wrapper] pandaids: 6893871895
[2025-11-21 03:26:38] 2025-11-21 02:26:37,995 [wrapper] cleanup supervisor_pilot 3814560 3814555
[2025-11-21 03:26:38] 2025-11-21 02:26:37,998 [wrapper] Test setup, not cleaning
[2025-11-21 03:26:38] 2025-11-21 02:26:38,000 [wrapper] apfmon messages muted
[2025-11-21 03:26:38] 2025-11-21 02:26:38,003 [wrapper] ==== wrapper stdout END ====
[2025-11-21 03:26:38] 2025-11-21 02:26:38,005 [wrapper] ==== wrapper stderr END ====
[2025-11-21 03:26:38]  *** Error codes and diagnostics ***
[2025-11-21 03:26:38]     "exeErrorCode": 65,
[2025-11-21 03:26:38]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-21 03:26:38]     "pilotErrorCode": 1305,
[2025-11-21 03:26:38]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-21 03:26:38]  *** Listing of results directory ***
[2025-11-21 03:26:38] total 404692
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc    576529 Nov 20 16:07 pilot3.tar.gz
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc      5112 Nov 20 16:09 queuedata.json
[2025-11-21 03:26:38] -rwx------ 1 boinc boinc     36292 Nov 20 16:10 runpilot2-wrapper.sh
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc       100 Nov 21 03:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 03:26:38] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 03:22 run_atlas
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc       105 Nov 21 03:22 job.xml
[2025-11-21 03:26:38] -rw-r--r-- 2 boinc boinc 410213842 Nov 21 03:22 EVNT.47493127._000670.pool.root.1
[2025-11-21 03:26:38] -rw-r--r-- 2 boinc boinc    590102 Nov 21 03:22 input.tar.gz
[2025-11-21 03:26:38] -rw-r--r-- 2 boinc boinc     15847 Nov 21 03:22 start_atlas.sh
[2025-11-21 03:26:38] drwxrwx--x 2 boinc boinc      4096 Nov 21 03:22 shared
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc         0 Nov 21 03:22 boinc_setup_complete
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc      6194 Nov 21 03:22 init_data.xml
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc         0 Nov 21 03:22 boinc_lockfile
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc      2785 Nov 21 03:22 pandaJob.out
[2025-11-21 03:26:38] -rw------- 1 boinc boinc    989817 Nov 21 03:22 agis_schedconf.cvmfs.json
[2025-11-21 03:26:38] -rw------- 1 boinc boinc   1526164 Nov 21 03:22 agis_ddmendpoints.agis.ALL.json
[2025-11-21 03:26:38] drwx------ 5 boinc boinc      4096 Nov 21 03:22 pilot3
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc       522 Nov 21 03:23 boinc_task_state.xml
[2025-11-21 03:26:38] -rw------- 1 boinc boinc       956 Nov 21 03:23 memory_monitor_summary.json
[2025-11-21 03:26:38] -rw------- 1 boinc boinc     55674 Nov 21 03:23 log.47523449._006695.job.log.tgz.1
[2025-11-21 03:26:38] -rw------- 1 boinc boinc        95 Nov 21 03:25 pilot_heartbeat.json
[2025-11-21 03:26:38] -rw------- 1 boinc boinc      8401 Nov 21 03:25 heartbeat.json
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc      8192 Nov 21 03:26 boinc_mmap_file
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc        22 Nov 21 03:26 wrapper_checkpoint.txt
[2025-11-21 03:26:38] -rw------- 1 boinc boinc      4556 Nov 21 03:26 pilotlog.txt
[2025-11-21 03:26:38] -rw------- 1 boinc boinc     93082 Nov 21 03:26 log.47523449._006695.job.log.1
[2025-11-21 03:26:38] -rw------- 1 boinc boinc       186 Nov 21 03:26 output.list
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc       620 Nov 21 03:26 runtime_log
[2025-11-21 03:26:38] -rw------- 1 boinc boinc    163840 Nov 21 03:26 result.tar.gz
[2025-11-21 03:26:38] -rw------- 1 boinc boinc       649 Nov 21 03:26 zLsNDmVTLg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUqGKDmBJiGsm.diag
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc      8744 Nov 21 03:26 runtime_log.err
[2025-11-21 03:26:38] -rw-r--r-- 1 boinc boinc      8046 Nov 21 03:26 stderr.txt
[2025-11-21 03:26:38] No HITS result produced
[2025-11-21 03:26:38]  *** Contents of shared directory: ***
[2025-11-21 03:26:38] total 401360
[2025-11-21 03:26:38] -rw-r--r-- 2 boinc boinc 410213842 Nov 21 03:22 ATLAS.root_0
[2025-11-21 03:26:38] -rw-r--r-- 2 boinc boinc    590102 Nov 21 03:22 input.tar.gz
[2025-11-21 03:26:38] -rw-r--r-- 2 boinc boinc     15847 Nov 21 03:22 start_atlas.sh
[2025-11-21 03:26:38] -rw------- 1 boinc boinc    163840 Nov 21 03:26 result.tar.gz
03:26:40 (3810821): run_atlas exited; CPU time 31.642343
03:26:40 (3810821): called boinc_finish(0)

</stderr_txt>
]]>

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