Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:46:35 (31237): wrapper (7.7.26015): starting
17:46:35 (31237): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 17:46:35] Arguments: --nthreads 8
[2025-11-20 17:46:35] Threads: 8
[2025-11-20 17:46:35] Checking for CVMFS
[2025-11-20 17:46:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 17:46:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 17:46:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 17:46:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 17:46:36] 2.11.2.0 2783 73948 80404 153098 2 81 18185709 20275201 1 130560 0 24139147 99.889 4152233 29675 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 17:46:36] CVMFS is ok
[2025-11-20 17:46:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 17:46:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 17:46:36] Further information can be found at the LHC@home message board.
[2025-11-20 17:46:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 17:46:36] Checking for apptainer binary...
[2025-11-20 17:46:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 17:46:36] Running /usr/bin/apptainer --version
[2025-11-20 17:46:36] apptainer version 1.3.2-1.el7
[2025-11-20 17:46:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 17:46:37] c-204-38.aglt2.org
[2025-11-20 17:46:37] apptainer works
[2025-11-20 17:46:37] Set ATHENA_PROC_NUMBER=8
[2025-11-20 17:46:37] Set ATHENA_CORE_NUMBER=8
[2025-11-20 17:46:37] Starting ATLAS job with PandaID=6893834051
[2025-11-20 17:46:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 06:27:17]  *** The last 200 lines of the pilot log: ***
[2025-11-21 06:27:17] 2025-11-21 11:26:27,804 | INFO     | time since job start (45572s) is within the limit (172800.0s)
[2025-11-21 06:27:17] 2025-11-21 11:26:29,433 | INFO     | monitor loop #3351: job 0:6893834051 is in state 'finished'
[2025-11-21 06:27:17] 2025-11-21 11:26:29,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 06:27:17] 2025-11-21 11:26:29,809 | INFO     | time since job start (45574s) is within the limit (172800.0s)
[2025-11-21 06:27:17] 2025-11-21 11:26:31,572 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 06:27:17] 2025-11-21 11:26:31,575 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-21 06:27:17] 2025-11-21 11:26:31,577 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893834051/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 06:27:17] 2025-11-21 11:26:31,578 | INFO     | extracted standard info from prmon json
[2025-11-21 06:27:17] 2025-11-21 11:26:31,578 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 06:27:17] 2025-11-21 11:26:31,578 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 06:27:17] 2025-11-21 11:26:31,591 | INFO     | fitting pss+swap vs Time
[2025-11-21 06:27:17] 2025-11-21 11:26:31,592 | INFO     | sum of square deviations: 129252643376.7341
[2025-11-21 06:27:17] 2025-11-21 11:26:31,604 | INFO     | sum of deviations: 888406974184.135
[2025-11-21 06:27:17] 2025-11-21 11:26:31,604 | INFO     | mean x: 1763701600.5046854
[2025-11-21 06:27:17] 2025-11-21 11:26:31,604 | INFO     | mean y: 2863845.532797858
[2025-11-21 06:27:17] 2025-11-21 11:26:31,604 | INFO     | intersect: -12119788050.266867
[2025-11-21 06:27:17] 2025-11-21 11:26:31,605 | INFO     | chi2: 5.723778806994193
[2025-11-21 06:27:17] 2025-11-21 11:26:31,606 | INFO     | sum of square deviations: 126674654207.95175
[2025-11-21 06:27:17] 2025-11-21 11:26:31,617 | INFO     | sum of deviations: 1123899790721.242
[2025-11-21 06:27:17] 2025-11-21 11:26:31,617 | INFO     | mean x: 1763701448.0080862
[2025-11-21 06:27:17] 2025-11-21 11:26:31,617 | INFO     | mean y: 2877766.9595687333
[2025-11-21 06:27:17] 2025-11-21 11:26:31,617 | INFO     | intersect: -15645269849.508204
[2025-11-21 06:27:17] 2025-11-21 11:26:31,618 | INFO     | chi2: 2.79934360044303
[2025-11-21 06:27:17] 2025-11-21 11:26:31,618 | INFO     | current chi2=2.79934360044303 (change=51.092736200386334 %)
[2025-11-21 06:27:17] 2025-11-21 11:26:31,619 | INFO     | sum of square deviations: 124131132296.17368
[2025-11-21 06:27:17] 2025-11-21 11:26:31,630 | INFO     | sum of deviations: 1170110705144.923
[2025-11-21 06:27:17] 2025-11-21 11:26:31,630 | INFO     | mean x: 1763701295.5101764
[2025-11-21 06:27:17] 2025-11-21 11:26:31,630 | INFO     | mean y: 2880526.210312076
[2025-11-21 06:27:17] 2025-11-21 11:26:31,631 | INFO     | intersect: -16622487569.445423
[2025-11-21 06:27:17] 2025-11-21 11:26:31,631 | INFO     | chi2: 2.50165031424273
[2025-11-21 06:27:17] 2025-11-21 11:26:31,632 | INFO     | current chi2=2.50165031424273 (change=10.63439608318129 %)
[2025-11-21 06:27:17] 2025-11-21 11:26:31,632 | INFO     | right removable region: 736
[2025-11-21 06:27:17] 2025-11-21 11:26:31,632 | INFO     | sum of square deviations: 126674424237.9518
[2025-11-21 06:27:17] 2025-11-21 11:26:31,644 | INFO     | sum of deviations: 682497225900.3662
[2025-11-21 06:27:17] 2025-11-21 11:26:31,644 | INFO     | mean x: 1763701753.0080862
[2025-11-21 06:27:17] 2025-11-21 11:26:31,644 | INFO     | mean y: 2876004.2722371966
[2025-11-21 06:27:17] 2025-11-21 11:26:31,644 | INFO     | intersect: -9499606923.79301
[2025-11-21 06:27:17] 2025-11-21 11:26:31,645 | INFO     | chi2: 3.3952301766145205
[2025-11-21 06:27:17] 2025-11-21 11:26:31,645 | INFO     | current chi2=3.3952301766145205 (change=40.6820163548999 %)
[2025-11-21 06:27:17] 2025-11-21 11:26:31,646 | INFO     | sum of square deviations: 124130807776.19165
[2025-11-21 06:27:17] 2025-11-21 11:26:31,657 | INFO     | sum of deviations: 639195151835.2416
[2025-11-21 06:27:17] 2025-11-21 11:26:31,658 | INFO     | mean x: 1763701905.5088196
[2025-11-21 06:27:17] 2025-11-21 11:26:31,658 | INFO     | mean y: 2878599.116689281
[2025-11-21 06:27:17] 2025-11-21 11:26:31,658 | INFO     | intersect: -9079070737.074137
[2025-11-21 06:27:17] 2025-11-21 11:26:31,659 | INFO     | chi2: 3.3557652011558967
[2025-11-21 06:27:17] 2025-11-21 11:26:31,659 | INFO     | current chi2=3.3557652011558967 (change=1.162365241992973 %)
[2025-11-21 06:27:17] 2025-11-21 11:26:31,659 | INFO     | left removable region: 20
[2025-11-21 06:27:17] 2025-11-21 11:26:31,660 | INFO     | sum of square deviations: 113819459026.8309
[2025-11-21 06:27:17] 2025-11-21 11:26:31,670 | INFO     | sum of deviations: 870809258938.2008
[2025-11-21 06:27:17] 2025-11-21 11:26:31,671 | INFO     | mean x: 1763701875.0153632
[2025-11-21 06:27:17] 2025-11-21 11:26:31,671 | INFO     | mean y: 2898496.0726256985
[2025-11-21 06:27:17] 2025-11-21 11:26:31,671 | INFO     | intersect: -13490821610.328468
[2025-11-21 06:27:17] 2025-11-21 11:26:31,672 | INFO     | chi2: 0.10387952415120932
[2025-11-21 06:27:17] 2025-11-21 11:26:31,672 | INFO     | current memory leak: 7.65 B/s (using 716 data points, chi2=0.10)
[2025-11-21 06:27:17] 2025-11-21 11:26:31,672 | INFO     | could have reported an average CPU frequency of 2170 MHz (28 samples)
[2025-11-21 06:27:17] 2025-11-21 11:26:31,672 | INFO     | ..............................
[2025-11-21 06:27:17] 2025-11-21 11:26:31,673 | INFO     | . Timing measurements:
[2025-11-21 06:27:17] 2025-11-21 11:26:31,673 | INFO     | . get job = 0 s
[2025-11-21 06:27:17] 2025-11-21 11:26:31,673 | INFO     | . initial setup = 2 s
[2025-11-21 06:27:17] 2025-11-21 11:26:31,673 | INFO     | . payload setup = 9 s
[2025-11-21 06:27:17] 2025-11-21 11:26:31,673 | INFO     | . stage-in = 0 s
[2025-11-21 06:27:17] 2025-11-21 11:26:31,673 | INFO     | . payload execution = 45531 s
[2025-11-21 06:27:17] 2025-11-21 11:26:31,673 | INFO     | . stage-out = 3 s
[2025-11-21 06:27:17] 2025-11-21 11:26:31,673 | INFO     | . log creation = 0 s
[2025-11-21 06:27:17] 2025-11-21 11:26:31,673 | INFO     | ..............................
[2025-11-21 06:27:17] 2025-11-21 11:26:31,762 | INFO     | 
[2025-11-21 06:27:17] 2025-11-21 11:26:31,762 | INFO     | job summary report
[2025-11-21 06:27:17] 2025-11-21 11:26:31,763 | INFO     | --------------------------------------------------
[2025-11-21 06:27:17] 2025-11-21 11:26:31,763 | INFO     | PanDA job id: 6893834051
[2025-11-21 06:27:17] 2025-11-21 11:26:31,763 | INFO     | task id: 47523449
[2025-11-21 06:27:17] 2025-11-21 11:26:31,763 | INFO     | errors: (none)
[2025-11-21 06:27:17] 2025-11-21 11:26:31,763 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 06:27:17] 2025-11-21 11:26:31,763 | INFO     | pilot state: finished 
[2025-11-21 06:27:17] 2025-11-21 11:26:31,763 | INFO     | transexitcode: 0
[2025-11-21 06:27:17] 2025-11-21 11:26:31,763 | INFO     | exeerrorcode: 0
[2025-11-21 06:27:17] 2025-11-21 11:26:31,764 | INFO     | exeerrordiag: 
[2025-11-21 06:27:17] 2025-11-21 11:26:31,764 | INFO     | exitcode: 0
[2025-11-21 06:27:17] 2025-11-21 11:26:31,764 | INFO     | exitmsg: OK
[2025-11-21 06:27:17] 2025-11-21 11:26:31,764 | INFO     | cpuconsumptiontime: 353287 s
[2025-11-21 06:27:17] 2025-11-21 11:26:31,764 | INFO     | nevents: 1000
[2025-11-21 06:27:17] 2025-11-21 11:26:31,765 | INFO     | neventsw: 0
[2025-11-21 06:27:17] 2025-11-21 11:26:31,765 | INFO     | pid: 9205
[2025-11-21 06:27:17] 2025-11-21 11:26:31,765 | INFO     | pgrp: 9205
[2025-11-21 06:27:17] 2025-11-21 11:26:31,765 | INFO     | corecount: 8
[2025-11-21 06:27:17] 2025-11-21 11:26:31,765 | INFO     | event service: False
[2025-11-21 06:27:17] 2025-11-21 11:26:31,765 | INFO     | sizes: {0: 2298803, 6: 2299065, 11: 2299093, 45544: 2345268, 45548: 2354262, 45550: 2354318, 45559: 2354692}
[2025-11-21 06:27:17] 2025-11-21 11:26:31,766 | INFO     | --------------------------------------------------
[2025-11-21 06:27:17] 2025-11-21 11:26:31,766 | INFO     | 
[2025-11-21 06:27:17] 2025-11-21 11:26:31,766 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 06:27:17] 2025-11-21 11:26:31,794 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,794 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,794 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,795 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,797 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 06:27:17] 2025-11-21 11:26:31,797 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,797 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 06:27:17] 2025-11-21 11:26:31,798 | INFO     | job 6893834051 has completed (purged errors)
[2025-11-21 06:27:17] 2025-11-21 11:26:31,798 | INFO     | overall cleanup function is called
[2025-11-21 06:27:17] 2025-11-21 11:26:32,814 | INFO     | --- collectZombieJob: --- 10, [9205]
[2025-11-21 06:27:17] 2025-11-21 11:26:32,814 | INFO     | zombie collector waiting for pid 9205
[2025-11-21 06:27:17] 2025-11-21 11:26:32,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 06:27:17] 2025-11-21 11:26:32,814 | INFO     | collected zombie processes
[2025-11-21 06:27:17] 2025-11-21 11:26:32,814 | INFO     | will attempt to kill all subprocesses of pid=9205
[2025-11-21 06:27:17] 2025-11-21 11:26:32,902 | INFO     | process IDs to be killed: [9205] (in reverse order)
[2025-11-21 06:27:17] 2025-11-21 11:26:32,959 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 06:27:17] 2025-11-21 11:26:32,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 06:27:17] 2025-11-21 11:26:32,964 | INFO     | did not find any defunct processes belonging to 9205
[2025-11-21 06:27:17] 2025-11-21 11:26:32,967 | INFO     | did not find any defunct processes belonging to 9205
[2025-11-21 06:27:17] 2025-11-21 11:26:32,969 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 06:27:17] 2025-11-21 11:26:32,970 | INFO     | ready for new job
[2025-11-21 06:27:17] 2025-11-21 11:26:32,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 06:27:17] 2025-11-21 11:26:32,973 | INFO     | ***************************************
[2025-11-21 06:27:17] 2025-11-21 11:26:32,973 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 06:27:17] 2025-11-21 11:26:32,973 | INFO     | ***************************************
[2025-11-21 06:27:17] 2025-11-21 11:26:32,973 | INFO     | 
[2025-11-21 06:27:17] 2025-11-21 11:26:32,974 | INFO     | architecture information:
[2025-11-21 06:27:17] 2025-11-21 11:26:32,975 | INFO     | executing command: cat /etc/os-release
[2025-11-21 06:27:17] 2025-11-21 11:26:32,993 | INFO     | cat /etc/os-release:
[2025-11-21 06:27:17] NAME="CentOS Linux"
[2025-11-21 06:27:17] VERSION="7 (Core)"
[2025-11-21 06:27:17] ID="centos"
[2025-11-21 06:27:17] ID_LIKE="rhel fedora"
[2025-11-21 06:27:17] VERSION_ID="7"
[2025-11-21 06:27:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 06:27:17] ANSI_COLOR="0;31"
[2025-11-21 06:27:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 06:27:17] HOME_URL="https://www.centos.org/"
[2025-11-21 06:27:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 06:27:17] 
[2025-11-21 06:27:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 06:27:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 06:27:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 06:27:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 06:27:17] 
[2025-11-21 06:27:17] 2025-11-21 11:26:32,994 | INFO     | ***************************************
[2025-11-21 06:27:17] 2025-11-21 11:26:33,497 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 06:27:17] 2025-11-21 11:26:33,517 | INFO     | sufficient remaining disk space (17431527424 B)
[2025-11-21 06:27:17] 2025-11-21 11:26:33,517 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 06:27:17] 2025-11-21 11:26:33,518 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 06:27:17] 2025-11-21 11:26:33,518 | INFO     | update_server=False
[2025-11-21 06:27:17] 2025-11-21 11:26:33,518 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 06:27:17] 2025-11-21 11:26:33,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 06:27:17] 2025-11-21 11:26:33,519 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 06:27:17] 2025-11-21 11:26:33,519 | INFO     | aborting loop
[2025-11-21 06:27:17] 2025-11-21 11:26:33,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 06:27:17] 2025-11-21 11:26:33,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 06:27:17] 2025-11-21 11:26:33,764 | INFO     | all data control threads have been joined
[2025-11-21 06:27:17] 2025-11-21 11:26:34,055 | INFO     | all payload control threads have been joined
[2025-11-21 06:27:17] 2025-11-21 11:26:34,498 | INFO     | all job control threads have been joined
[2025-11-21 06:27:17] 2025-11-21 11:26:34,524 | INFO     | [job] retrieve thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:34,524 | INFO     | [job] queue monitor thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:34,525 | INFO     | [job] job monitor thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:34,670 | INFO     | [data] copytool_in thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:34,769 | INFO     | [data] control thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:35,059 | INFO     | [payload] control thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:35,470 | INFO     | [payload] validate_post thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:35,504 | INFO     | [job] control thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:35,569 | INFO     | [job] validate thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:35,569 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:35,738 | INFO     | [data] copytool_out thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:35,764 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:35,893 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:35,914 | INFO     | [payload] failed_post thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:35,986 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:26:37,525 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 06:27:17] 2025-11-21 11:27:03,002 | INFO     | PID=2544 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-21 06:27:17] 2025-11-21 11:27:03,003 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 06:27:17] 2025-11-21 11:27:03,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 06:27:17] 2025-11-21 11:27:03,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 06:27:17] 2025-11-21 11:27:10,523 | INFO     | [monitor] cgroup control has ended
[2025-11-21 06:27:17] 2025-11-21 11:27:12,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140346475558720)>', '<ExcThread(monitor, started 140345866168064)>']
[2025-11-21 06:27:17] 2025-11-21 11:27:13,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 06:27:17] 2025-11-21 11:27:13,042 | INFO     | [monitor] control thread has ended
[2025-11-21 06:27:17] 2025-11-21 11:27:17,269 | INFO     | all workflow threads have been joined
[2025-11-21 06:27:17] 2025-11-21 11:27:17,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 06:27:17] 2025-11-21 11:27:17,270 | INFO     | traces error code: 0
[2025-11-21 06:27:17] 2025-11-21 11:27:17,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 06:27:17] 2025-11-21 11:27:17,380 [wrapper] ==== pilot stdout END ====
[2025-11-21 06:27:17] 2025-11-21 11:27:17,385 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 06:27:17] 2025-11-21 11:27:17,390 [wrapper] pilotpid: 2544
[2025-11-21 06:27:17] 2025-11-21 11:27:17,395 [wrapper] Pilot exit status: 0
[2025-11-21 06:27:17] 2025-11-21 11:27:17,411 [wrapper] pandaids: 6893834051
[2025-11-21 06:27:17] 2025-11-21 11:27:17,463 [wrapper] cleanup supervisor_pilot  8747 2545
[2025-11-21 06:27:17] 2025-11-21 11:27:17,468 [wrapper] Test setup, not cleaning
[2025-11-21 06:27:17] 2025-11-21 11:27:17,472 [wrapper] apfmon messages muted
[2025-11-21 06:27:17] 2025-11-21 11:27:17,477 [wrapper] ==== wrapper stdout END ====
[2025-11-21 06:27:17] 2025-11-21 11:27:17,481 [wrapper] ==== wrapper stderr END ====
[2025-11-21 06:27:17]  *** Error codes and diagnostics ***
[2025-11-21 06:27:17]     "exeErrorCode": 0,
[2025-11-21 06:27:17]     "exeErrorDiag": "",
[2025-11-21 06:27:17]     "pilotErrorCode": 0,
[2025-11-21 06:27:17]     "pilotErrorDiag": "",
[2025-11-21 06:27:17]  *** Listing of results directory ***
[2025-11-21 06:27:17] total 1318012
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-21 06:27:17] -rwx------ 1 boincer umatlas     36292 Nov 20 05:12 runpilot2-wrapper.sh
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 05:13 queuedata.json
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas       100 Nov 20 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 06:27:17] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 17:46 run_atlas
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas       105 Nov 20 17:46 job.xml
[2025-11-21 06:27:17] -rw-r--r-- 2 boincer umatlas 409976906 Nov 20 17:46 EVNT.47493127._000049.pool.root.1
[2025-11-21 06:27:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 17:46 start_atlas.sh
[2025-11-21 06:27:17] drwxrwx--x 2 boincer umatlas      4096 Nov 20 17:46 shared
[2025-11-21 06:27:17] -rw-r--r-- 2 boincer umatlas    590101 Nov 20 17:46 input.tar.gz
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas         0 Nov 20 17:46 boinc_lockfile
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas      2784 Nov 20 17:46 pandaJob.out
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas        57 Nov 20 17:46 setup.sh.local
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas    989825 Nov 20 17:46 agis_schedconf.cvmfs.json
[2025-11-21 06:27:17] drwx------ 5 boincer umatlas      4096 Nov 20 17:46 pilot3
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas       532 Nov 21 06:17 boinc_task_state.xml
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas      5911 Nov 21 06:20 init_data.xml
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas 919224351 Nov 21 06:25 HITS.47523449._000490.pool.root.1
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas      1064 Nov 21 06:26 memory_monitor_summary.json
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas   1526164 Nov 21 06:26 agis_ddmendpoints.agis.ALL.json
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas   1993628 Nov 21 06:26 log.47523449._000490.job.log.tgz.1
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas      8672 Nov 21 06:26 heartbeat.json
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas        29 Nov 21 06:26 wrapper_checkpoint.txt
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 06:26 boinc_mmap_file
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas        95 Nov 21 06:27 pilot_heartbeat.json
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas      4745 Nov 21 06:27 pilotlog.txt
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas   6262964 Nov 21 06:27 log.47523449._000490.job.log.1
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas       353 Nov 21 06:27 output.list
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas       620 Nov 21 06:27 runtime_log
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas   8273920 Nov 21 06:27 result.tar.gz
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas       668 Nov 21 06:27 XszNDmspGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuBHKDmbhpQIo.diag
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas      9343 Nov 21 06:27 runtime_log.err
[2025-11-21 06:27:17] -rw-r--r-- 1 boincer umatlas     21285 Nov 21 06:27 stderr.txt
[2025-11-21 06:27:17] HITS file was successfully produced:
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas 919224351 Nov 21 06:25 shared/HITS.pool.root.1
[2025-11-21 06:27:17]  *** Contents of shared directory: ***
[2025-11-21 06:27:17] total 1306740
[2025-11-21 06:27:17] -rw-r--r-- 2 boincer umatlas 409976906 Nov 20 17:46 ATLAS.root_0
[2025-11-21 06:27:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 17:46 start_atlas.sh
[2025-11-21 06:27:17] -rw-r--r-- 2 boincer umatlas    590101 Nov 20 17:46 input.tar.gz
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas 919224351 Nov 21 06:25 HITS.pool.root.1
[2025-11-21 06:27:17] -rw------- 1 boincer umatlas   8273920 Nov 21 06:27 result.tar.gz
06:27:19 (31237): run_atlas exited; CPU time 349409.120258
06:27:19 (31237): called boinc_finish(0)

</stderr_txt>
]]>

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