Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:42:49 (32461): wrapper (7.7.26015): starting
15:42:49 (32461): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 15:42:49] Arguments: --nthreads 8
[2025-11-20 15:42:49] Threads: 8
[2025-11-20 15:42:49] Checking for CVMFS
[2025-11-20 15:42:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 15:42:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 15:42:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 15:42:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 15:42:49] 2.11.2.0 2951 16422 72108 153095 3 81 18111767 20275201 1 130560 0 1538033 99.178 1325274 37995 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://10.10.128.19:3128 1
[2025-11-20 15:42:49] CVMFS is ok
[2025-11-20 15:42:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 15:42:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 15:42:49] Further information can be found at the LHC@home message board.
[2025-11-20 15:42:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 15:42:49] Checking for apptainer binary...
[2025-11-20 15:42:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 15:42:49] Running /usr/bin/apptainer --version
[2025-11-20 15:42:49] apptainer version 1.3.2-1.el7
[2025-11-20 15:42:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 15:42:51] c-204-23.aglt2.org
[2025-11-20 15:42:51] apptainer works
[2025-11-20 15:42:51] Set ATHENA_PROC_NUMBER=8
[2025-11-20 15:42:51] Set ATHENA_CORE_NUMBER=8
[2025-11-20 15:42:51] Starting ATLAS job with PandaID=6893854806
[2025-11-20 15:42:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:27:32 (20834): wrapper (7.7.26015): starting
22:27:32 (20834): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 22:27:32] Arguments: --nthreads 8
[2025-11-20 22:27:32] Threads: 8
[2025-11-20 22:27:32] This job has been restarted, cleaning up previous attempt
[2025-11-20 22:27:33] Checking for CVMFS
[2025-11-20 22:27:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 22:27:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 22:27:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 22:27:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 22:27:33] 2.11.2.0 2951 16827 79868 153106 3 56 18584531 20275201 1 130560 0 1696685 99.253 1338626 29404 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 22:27:33] CVMFS is ok
[2025-11-20 22:27:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 22:27:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 22:27:33] Further information can be found at the LHC@home message board.
[2025-11-20 22:27:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 22:27:33] Checking for apptainer binary...
[2025-11-20 22:27:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 22:27:33] Running /usr/bin/apptainer --version
[2025-11-20 22:27:33] apptainer version 1.3.2-1.el7
[2025-11-20 22:27:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 22:27:35] c-204-23.aglt2.org
[2025-11-20 22:27:35] apptainer works
[2025-11-20 22:27:35] Set ATHENA_PROC_NUMBER=8
[2025-11-20 22:27:35] Set ATHENA_CORE_NUMBER=8
[2025-11-20 22:27:35] Starting ATLAS job with PandaID=6893854806
[2025-11-20 22:27:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 10:54:19]  *** The last 200 lines of the pilot log: ***
[2025-11-21 10:54:19] 2025-11-21 15:53:59,731 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 10:54:19] 2025-11-21 15:53:59,743 | INFO     | fitting pss+swap vs Time
[2025-11-21 10:54:19] 2025-11-21 15:53:59,744 | INFO     | sum of square deviations: 122620721321.28062
[2025-11-21 10:54:19] 2025-11-21 15:53:59,758 | INFO     | sum of deviations: 681061954199.5562
[2025-11-21 10:54:19] 2025-11-21 15:53:59,758 | INFO     | mean x: 1763718062.1089919
[2025-11-21 10:54:19] 2025-11-21 15:53:59,758 | INFO     | mean y: 3216358.143051771
[2025-11-21 10:54:19] 2025-11-21 15:53:59,758 | INFO     | intersect: -9792854461.646994
[2025-11-21 10:54:19] 2025-11-21 15:53:59,759 | INFO     | chi2: 7.108429798600527
[2025-11-21 10:54:19] 2025-11-21 15:53:59,760 | INFO     | sum of square deviations: 120132001686.91283
[2025-11-21 10:54:19] 2025-11-21 15:53:59,771 | INFO     | sum of deviations: 987649759084.4248
[2025-11-21 10:54:19] 2025-11-21 15:53:59,771 | INFO     | mean x: 1763717909.6131687
[2025-11-21 10:54:19] 2025-11-21 15:53:59,771 | INFO     | mean y: 3235146.3100137175
[2025-11-21 10:54:19] 2025-11-21 15:53:59,771 | INFO     | intersect: -14496944190.268026
[2025-11-21 10:54:19] 2025-11-21 15:53:59,772 | INFO     | chi2: 3.2747593425339727
[2025-11-21 10:54:19] 2025-11-21 15:53:59,772 | INFO     | current chi2=3.2747593425339727 (change=53.93132611116606 %)
[2025-11-21 10:54:19] 2025-11-21 15:53:59,773 | INFO     | sum of square deviations: 117677189665.0208
[2025-11-21 10:54:19] 2025-11-21 15:53:59,784 | INFO     | sum of deviations: 1125573534294.3687
[2025-11-21 10:54:19] 2025-11-21 15:53:59,784 | INFO     | mean x: 1763717757.1174033
[2025-11-21 10:54:19] 2025-11-21 15:53:59,784 | INFO     | mean y: 3243710.0897790054
[2025-11-21 10:54:19] 2025-11-21 15:53:59,784 | INFO     | intersect: -16866584971.470465
[2025-11-21 10:54:19] 2025-11-21 15:53:59,785 | INFO     | chi2: 2.3872159831830904
[2025-11-21 10:54:19] 2025-11-21 15:53:59,785 | INFO     | current chi2=2.3872159831830904 (change=27.102552173012846 %)
[2025-11-21 10:54:19] 2025-11-21 15:53:59,786 | INFO     | sum of square deviations: 115256008773.34325
[2025-11-21 10:54:19] 2025-11-21 15:53:59,797 | INFO     | sum of deviations: 1143609387855.3818
[2025-11-21 10:54:19] 2025-11-21 15:53:59,797 | INFO     | mean x: 1763717604.620306
[2025-11-21 10:54:19] 2025-11-21 15:53:59,797 | INFO     | mean y: 3244839.26147427
[2025-11-21 10:54:19] 2025-11-21 15:53:59,797 | INFO     | intersect: -17496962148.958366
[2025-11-21 10:54:19] 2025-11-21 15:53:59,798 | INFO     | chi2: 2.2926417006554978
[2025-11-21 10:54:19] 2025-11-21 15:53:59,798 | INFO     | current chi2=2.2926417006554978 (change=3.961697776565997 %)
[2025-11-21 10:54:19] 2025-11-21 15:53:59,798 | INFO     | right removable region: 718
[2025-11-21 10:54:19] 2025-11-21 15:53:59,799 | INFO     | sum of square deviations: 120131729016.91284
[2025-11-21 10:54:19] 2025-11-21 15:53:59,810 | INFO     | sum of deviations: 461787445771.61383
[2025-11-21 10:54:19] 2025-11-21 15:53:59,811 | INFO     | mean x: 1763718214.6131687
[2025-11-21 10:54:19] 2025-11-21 15:53:59,811 | INFO     | mean y: 3229771.3319615913
[2025-11-21 10:54:19] 2025-11-21 15:53:59,811 | INFO     | intersect: -6776518893.3394785
[2025-11-21 10:54:19] 2025-11-21 15:53:59,812 | INFO     | chi2: 4.981910019177116
[2025-11-21 10:54:19] 2025-11-21 15:53:59,812 | INFO     | current chi2=4.981910019177116 (change=29.91546431030479 %)
[2025-11-21 10:54:19] 2025-11-21 15:53:59,813 | INFO     | sum of square deviations: 117676644325.02081
[2025-11-21 10:54:19] 2025-11-21 15:53:59,824 | INFO     | sum of deviations: 415886491302.82336
[2025-11-21 10:54:19] 2025-11-21 15:53:59,824 | INFO     | mean x: 1763718367.1174033
[2025-11-21 10:54:19] 2025-11-21 15:53:59,824 | INFO     | mean y: 3232621.3314917125
[2025-11-21 10:54:19] 2025-11-21 15:53:59,824 | INFO     | intersect: -6230006332.363256
[2025-11-21 10:54:19] 2025-11-21 15:53:59,825 | INFO     | chi2: 4.9381917419129095
[2025-11-21 10:54:19] 2025-11-21 15:53:59,825 | INFO     | current chi2=4.9381917419129095 (change=0.8775404833872843 %)
[2025-11-21 10:54:19] 2025-11-21 15:53:59,825 | INFO     | left removable region: 20
[2025-11-21 10:54:19] 2025-11-21 15:53:59,826 | INFO     | sum of square deviations: 105448843169.87381
[2025-11-21 10:54:19] 2025-11-21 15:53:59,836 | INFO     | sum of deviations: 821392857476.0623
[2025-11-21 10:54:19] 2025-11-21 15:53:59,836 | INFO     | mean x: 1763718184.1318052
[2025-11-21 10:54:19] 2025-11-21 15:53:59,836 | INFO     | mean y: 3265212.9340974214
[2025-11-21 10:54:19] 2025-11-21 15:53:59,836 | INFO     | intersect: -13735202422.151375
[2025-11-21 10:54:19] 2025-11-21 15:53:59,837 | INFO     | chi2: 0.08176414915073514
[2025-11-21 10:54:19] 2025-11-21 15:53:59,837 | INFO     | current memory leak: 7.79 B/s (using 698 data points, chi2=0.08)
[2025-11-21 10:54:19] 2025-11-21 15:53:59,838 | INFO     | could have reported an average CPU frequency of 2175 MHz (28 samples)
[2025-11-21 10:54:19] 2025-11-21 15:53:59,838 | INFO     | ..............................
[2025-11-21 10:54:19] 2025-11-21 15:53:59,838 | INFO     | . Timing measurements:
[2025-11-21 10:54:19] 2025-11-21 15:53:59,838 | INFO     | . get job = 0 s
[2025-11-21 10:54:19] 2025-11-21 15:53:59,838 | INFO     | . initial setup = 2 s
[2025-11-21 10:54:19] 2025-11-21 15:53:59,838 | INFO     | . payload setup = 9 s
[2025-11-21 10:54:19] 2025-11-21 15:53:59,838 | INFO     | . stage-in = 0 s
[2025-11-21 10:54:19] 2025-11-21 15:53:59,839 | INFO     | . payload execution = 44724 s
[2025-11-21 10:54:19] 2025-11-21 15:53:59,839 | INFO     | . stage-out = 3 s
[2025-11-21 10:54:19] 2025-11-21 15:53:59,839 | INFO     | . log creation = 0 s
[2025-11-21 10:54:19] 2025-11-21 15:53:59,839 | INFO     | ..............................
[2025-11-21 10:54:19] 2025-11-21 15:53:59,947 | INFO     | time since job start (44767s) is within the limit (172800.0s)
[2025-11-21 10:54:19] 2025-11-21 15:54:00,084 | INFO     | 
[2025-11-21 10:54:19] 2025-11-21 15:54:00,084 | INFO     | job summary report
[2025-11-21 10:54:19] 2025-11-21 15:54:00,084 | INFO     | --------------------------------------------------
[2025-11-21 10:54:19] 2025-11-21 15:54:00,085 | INFO     | PanDA job id: 6893854806
[2025-11-21 10:54:19] 2025-11-21 15:54:00,085 | INFO     | task id: 47523449
[2025-11-21 10:54:19] 2025-11-21 15:54:00,085 | INFO     | errors: (none)
[2025-11-21 10:54:19] 2025-11-21 15:54:00,085 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 10:54:19] 2025-11-21 15:54:00,085 | INFO     | pilot state: finished 
[2025-11-21 10:54:19] 2025-11-21 15:54:00,086 | INFO     | transexitcode: 0
[2025-11-21 10:54:19] 2025-11-21 15:54:00,086 | INFO     | exeerrorcode: 0
[2025-11-21 10:54:19] 2025-11-21 15:54:00,086 | INFO     | exeerrordiag: 
[2025-11-21 10:54:19] 2025-11-21 15:54:00,086 | INFO     | exitcode: 0
[2025-11-21 10:54:19] 2025-11-21 15:54:00,086 | INFO     | exitmsg: OK
[2025-11-21 10:54:19] 2025-11-21 15:54:00,086 | INFO     | cpuconsumptiontime: 346629 s
[2025-11-21 10:54:19] 2025-11-21 15:54:00,087 | INFO     | nevents: 1000
[2025-11-21 10:54:19] 2025-11-21 15:54:00,087 | INFO     | neventsw: 0
[2025-11-21 10:54:19] 2025-11-21 15:54:00,087 | INFO     | pid: 31018
[2025-11-21 10:54:19] 2025-11-21 15:54:00,087 | INFO     | pgrp: 31018
[2025-11-21 10:54:19] 2025-11-21 15:54:00,087 | INFO     | corecount: 8
[2025-11-21 10:54:19] 2025-11-21 15:54:00,087 | INFO     | event service: False
[2025-11-21 10:54:19] 2025-11-21 15:54:00,088 | INFO     | sizes: {0: 2298580, 1: 2298835, 7: 2299097, 12: 2299125, 44737: 2344995, 44742: 2353989, 44744: 2354173, 44750: 2354419}
[2025-11-21 10:54:19] 2025-11-21 15:54:00,088 | INFO     | --------------------------------------------------
[2025-11-21 10:54:19] 2025-11-21 15:54:00,088 | INFO     | 
[2025-11-21 10:54:19] 2025-11-21 15:54:00,088 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 10:54:19] 2025-11-21 15:54:00,117 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,118 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,118 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,118 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,118 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,118 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,119 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,121 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 10:54:19] 2025-11-21 15:54:00,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,121 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 10:54:19] 2025-11-21 15:54:00,122 | INFO     | job 6893854806 has completed (purged errors)
[2025-11-21 10:54:19] 2025-11-21 15:54:00,122 | INFO     | overall cleanup function is called
[2025-11-21 10:54:19] 2025-11-21 15:54:01,137 | INFO     | --- collectZombieJob: --- 10, [31018]
[2025-11-21 10:54:19] 2025-11-21 15:54:01,137 | INFO     | zombie collector waiting for pid 31018
[2025-11-21 10:54:19] 2025-11-21 15:54:01,137 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 10:54:19] 2025-11-21 15:54:01,138 | INFO     | collected zombie processes
[2025-11-21 10:54:19] 2025-11-21 15:54:01,138 | INFO     | will attempt to kill all subprocesses of pid=31018
[2025-11-21 10:54:19] 2025-11-21 15:54:01,239 | INFO     | process IDs to be killed: [31018] (in reverse order)
[2025-11-21 10:54:19] 2025-11-21 15:54:01,297 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 10:54:19] 2025-11-21 15:54:01,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 10:54:19] 2025-11-21 15:54:01,302 | INFO     | did not find any defunct processes belonging to 31018
[2025-11-21 10:54:19] 2025-11-21 15:54:01,306 | INFO     | did not find any defunct processes belonging to 31018
[2025-11-21 10:54:19] 2025-11-21 15:54:01,309 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 10:54:19] 2025-11-21 15:54:01,309 | INFO     | ready for new job
[2025-11-21 10:54:19] 2025-11-21 15:54:01,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 10:54:19] 2025-11-21 15:54:01,313 | INFO     | ***************************************
[2025-11-21 10:54:19] 2025-11-21 15:54:01,313 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 10:54:19] 2025-11-21 15:54:01,313 | INFO     | ***************************************
[2025-11-21 10:54:19] 2025-11-21 15:54:01,313 | INFO     | 
[2025-11-21 10:54:19] 2025-11-21 15:54:01,314 | INFO     | architecture information:
[2025-11-21 10:54:19] 2025-11-21 15:54:01,315 | INFO     | executing command: cat /etc/os-release
[2025-11-21 10:54:19] 2025-11-21 15:54:01,333 | INFO     | cat /etc/os-release:
[2025-11-21 10:54:19] NAME="CentOS Linux"
[2025-11-21 10:54:19] VERSION="7 (Core)"
[2025-11-21 10:54:19] ID="centos"
[2025-11-21 10:54:19] ID_LIKE="rhel fedora"
[2025-11-21 10:54:19] VERSION_ID="7"
[2025-11-21 10:54:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 10:54:19] ANSI_COLOR="0;31"
[2025-11-21 10:54:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 10:54:19] HOME_URL="https://www.centos.org/"
[2025-11-21 10:54:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 10:54:19] 
[2025-11-21 10:54:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 10:54:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 10:54:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 10:54:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 10:54:19] 
[2025-11-21 10:54:19] 2025-11-21 15:54:01,334 | INFO     | ***************************************
[2025-11-21 10:54:19] 2025-11-21 15:54:01,836 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 10:54:19] 2025-11-21 15:54:01,857 | INFO     | sufficient remaining disk space (17024679936 B)
[2025-11-21 10:54:19] 2025-11-21 15:54:01,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 10:54:19] 2025-11-21 15:54:01,858 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 10:54:19] 2025-11-21 15:54:01,858 | INFO     | update_server=False
[2025-11-21 10:54:19] 2025-11-21 15:54:01,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 10:54:19] 2025-11-21 15:54:01,858 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-21 10:54:19] 2025-11-21 15:54:01,859 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 10:54:19] 2025-11-21 15:54:01,859 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 10:54:19] 2025-11-21 15:54:01,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:54:19] 2025-11-21 15:54:01,860 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:54:19] 2025-11-21 15:54:01,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 10:54:19] 2025-11-21 15:54:01,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 10:54:19] 2025-11-21 15:54:01,861 | INFO     | aborting loop
[2025-11-21 10:54:19] 2025-11-21 15:54:02,248 | INFO     | all data control threads have been joined
[2025-11-21 10:54:19] 2025-11-21 15:54:02,863 | INFO     | [job] retrieve thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:02,866 | INFO     | [job] job monitor thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:02,867 | INFO     | [job] queue monitor thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:02,924 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:02,968 | INFO     | [job] validate thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:03,059 | INFO     | all payload control threads have been joined
[2025-11-21 10:54:19] 2025-11-21 15:54:03,170 | INFO     | all job control threads have been joined
[2025-11-21 10:54:19] 2025-11-21 15:54:03,249 | INFO     | [data] control thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:03,429 | INFO     | [payload] failed_post thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:03,629 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:03,863 | INFO     | [data] copytool_out thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:03,910 | INFO     | [payload] validate_post thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:04,064 | INFO     | [payload] control thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:04,163 | INFO     | [data] copytool_in thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:04,176 | INFO     | [job] control thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:04,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 10:54:19] 2025-11-21 15:54:04,268 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:06,784 | INFO     | [monitor] cgroup control has ended
[2025-11-21 10:54:19] 2025-11-21 15:54:08,226 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:12,283 | INFO     | job.realtimelogging is not enabled
[2025-11-21 10:54:19] 2025-11-21 15:54:13,288 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 10:54:19] 2025-11-21 15:54:14,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140106995521344)>', '<ExcThread(monitor, started 140106035873536)>']
[2025-11-21 10:54:19] 2025-11-21 15:54:14,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 10:54:19] 2025-11-21 15:54:14,925 | INFO     | [monitor] control thread has ended
[2025-11-21 10:54:19] 2025-11-21 15:54:19,450 | INFO     | all workflow threads have been joined
[2025-11-21 10:54:19] 2025-11-21 15:54:19,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 10:54:19] 2025-11-21 15:54:19,451 | INFO     | traces error code: 0
[2025-11-21 10:54:19] 2025-11-21 15:54:19,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 10:54:19] 2025-11-21 15:54:19,577 [wrapper] ==== pilot stdout END ====
[2025-11-21 10:54:19] 2025-11-21 15:54:19,581 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 10:54:19] 2025-11-21 15:54:19,586 [wrapper] pilotpid: 24529
[2025-11-21 10:54:19] 2025-11-21 15:54:19,590 [wrapper] Pilot exit status: 0
[2025-11-21 10:54:19] 2025-11-21 15:54:19,609 [wrapper] pandaids: 6893854806 6893854806
[2025-11-21 10:54:19] 2025-11-21 15:54:19,651 [wrapper] cleanup supervisor_pilot 28256 24530
[2025-11-21 10:54:19] 2025-11-21 15:54:19,656 [wrapper] Test setup, not cleaning
[2025-11-21 10:54:19] 2025-11-21 15:54:19,660 [wrapper] apfmon messages muted
[2025-11-21 10:54:19] 2025-11-21 15:54:19,665 [wrapper] ==== wrapper stdout END ====
[2025-11-21 10:54:19] 2025-11-21 15:54:19,670 [wrapper] ==== wrapper stderr END ====
[2025-11-21 10:54:19]  *** Error codes and diagnostics ***
[2025-11-21 10:54:19]     "exeErrorCode": 0,
[2025-11-21 10:54:19]     "exeErrorDiag": "",
[2025-11-21 10:54:19]     "pilotErrorCode": 0,
[2025-11-21 10:54:19]     "pilotErrorDiag": "",
[2025-11-21 10:54:19]  *** Listing of results directory ***
[2025-11-21 10:54:19] total 1721276
[2025-11-21 10:54:19] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 07:07 pilot3.tar.gz
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 07:26 queuedata.json
[2025-11-21 10:54:19] -rwx------ 1 boincer umatlas     36292 Nov 20 07:26 runpilot2-wrapper.sh
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas       100 Nov 20 15:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 10:54:19] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 15:42 run_atlas
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas       105 Nov 20 15:42 job.xml
[2025-11-21 10:54:19] -rw-r--r-- 3 boincer umatlas 408810051 Nov 20 15:42 EVNT.47493127._000427.pool.root.1
[2025-11-21 10:54:19] -rw-r--r-- 3 boincer umatlas 408810051 Nov 20 15:42 ATLAS.root_0
[2025-11-21 10:54:19] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 15:42 start_atlas.sh
[2025-11-21 10:54:19] drwxrwx--x 2 boincer umatlas      4096 Nov 20 15:42 shared
[2025-11-21 10:54:19] -rw-r--r-- 2 boincer umatlas    590100 Nov 20 15:42 input.tar.gz
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas         0 Nov 20 15:42 boinc_lockfile
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas      2786 Nov 20 22:27 pandaJob.out
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas        57 Nov 20 22:27 setup.sh.local
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas    989817 Nov 20 22:27 agis_schedconf.cvmfs.json
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas       532 Nov 21 10:40 boinc_task_state.xml
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas      5912 Nov 21 10:45 init_data.xml
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas        96 Nov 21 10:53 pilot_heartbeat.json
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas 924764835 Nov 21 10:53 HITS.47523449._004263.pool.root.1
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas      1062 Nov 21 10:53 memory_monitor_summary.json
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas   1526164 Nov 21 10:53 agis_ddmendpoints.agis.ALL.json
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas   1976096 Nov 21 10:53 log.47523449._004263.job.log.tgz.1
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas      8673 Nov 21 10:53 heartbeat.json
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 10:54 boinc_mmap_file
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas        29 Nov 21 10:54 wrapper_checkpoint.txt
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas      4624 Nov 21 10:54 pilotlog.txt
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas   6156750 Nov 21 10:54 log.47523449._004263.job.log.1
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas       353 Nov 21 10:54 output.list
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas       620 Nov 21 10:54 runtime_log
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas   8151040 Nov 21 10:54 result.tar.gz
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas      9428 Nov 21 10:54 runtime_log.err
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas       793 Nov 21 10:54 6yoKDmXvIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQcGKDmn7yGZn.diag
[2025-11-21 10:54:19] -rw-r--r-- 1 boincer umatlas     23184 Nov 21 10:54 stderr.txt
[2025-11-21 10:54:19] HITS file was successfully produced:
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas 924764835 Nov 21 10:53 shared/HITS.pool.root.1
[2025-11-21 10:54:19]  *** Contents of shared directory: ***
[2025-11-21 10:54:19] total 1310888
[2025-11-21 10:54:19] -rw-r--r-- 3 boincer umatlas 408810051 Nov 20 15:42 ATLAS.root_0
[2025-11-21 10:54:19] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 15:42 start_atlas.sh
[2025-11-21 10:54:19] -rw-r--r-- 2 boincer umatlas    590100 Nov 20 15:42 input.tar.gz
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas 924764835 Nov 21 10:53 HITS.pool.root.1
[2025-11-21 10:54:19] -rw------- 1 boincer umatlas   8151040 Nov 21 10:54 result.tar.gz
10:54:21 (20834): run_atlas exited; CPU time 344494.787476
10:54:21 (20834): called boinc_finish(0)

</stderr_txt>
]]>

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