Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:26:05 (31993): wrapper (7.7.26015): starting
16:26:05 (31993): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 16:26:05] Arguments: --nthreads 8
[2025-11-23 16:26:05] Threads: 8
[2025-11-23 16:26:05] Checking for CVMFS
[2025-11-23 16:26:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 16:26:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 16:26:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 16:26:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 16:26:07] 2.11.2.0 27391 83580 89780 153213 0 117 19783391 25165824 4462 130560 5 23763260 99.880 13267726 1682 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 16:26:07] CVMFS is ok
[2025-11-23 16:26:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 16:26:07] Checking for apptainer binary...
[2025-11-23 16:26:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 16:26:07] Running /usr/bin/apptainer --version
[2025-11-23 16:26:07] apptainer version 1.3.2-1.el7
[2025-11-23 16:26:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 16:26:46] cg-vwn417.simple-grid.lan
[2025-11-23 16:26:46] apptainer works
[2025-11-23 16:26:46] Set ATHENA_PROC_NUMBER=8
[2025-11-23 16:26:46] Set ATHENA_CORE_NUMBER=8
[2025-11-23 16:26:46] Starting ATLAS job with PandaID=6893843632
[2025-11-23 16:26:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 16:29:18]  *** The last 200 lines of the pilot log: ***
[2025-11-24 16:29:18] 2025-11-24 15:28:31,101 | INFO     | time since job start (86276s) is within the limit (172800.0s)
[2025-11-24 16:29:18] 2025-11-24 15:28:31,256 | INFO     | monitor loop #5804: job 0:6893843632 is in state 'finished'
[2025-11-24 16:29:18] 2025-11-24 15:28:31,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 16:29:18] 2025-11-24 15:28:33,111 | INFO     | time since job start (86278s) is within the limit (172800.0s)
[2025-11-24 16:29:18] 2025-11-24 15:28:33,762 | INFO     | monitor loop #5805: job 0:6893843632 is in state 'finished'
[2025-11-24 16:29:18] 2025-11-24 15:28:33,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 16:29:18] 2025-11-24 15:28:35,117 | INFO     | time since job start (86280s) is within the limit (172800.0s)
[2025-11-24 16:29:18] 2025-11-24 15:28:36,269 | INFO     | monitor loop #5806: job 0:6893843632 is in state 'finished'
[2025-11-24 16:29:18] 2025-11-24 15:28:36,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 16:29:18] 2025-11-24 15:28:37,124 | INFO     | time since job start (86282s) is within the limit (172800.0s)
[2025-11-24 16:29:18] 2025-11-24 15:28:38,781 | INFO     | monitor loop #5807: job 0:6893843632 is in state 'finished'
[2025-11-24 16:29:18] 2025-11-24 15:28:38,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 16:29:18] 2025-11-24 15:28:39,133 | INFO     | time since job start (86284s) is within the limit (172800.0s)
[2025-11-24 16:29:18] 2025-11-24 15:28:41,141 | INFO     | time since job start (86286s) is within the limit (172800.0s)
[2025-11-24 16:29:18] 2025-11-24 15:28:41,194 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 16:29:18] 2025-11-24 15:28:41,195 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 16:29:18] 2025-11-24 15:28:41,197 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6893843632/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 16:29:18] 2025-11-24 15:28:41,198 | INFO     | extracted standard info from prmon json
[2025-11-24 16:29:18] 2025-11-24 15:28:41,198 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 16:29:18] 2025-11-24 15:28:41,198 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 16:29:18] 2025-11-24 15:28:41,226 | INFO     | fitting pss+swap vs Time
[2025-11-24 16:29:18] 2025-11-24 15:28:41,228 | INFO     | sum of square deviations: 860006318992.5955
[2025-11-24 16:29:18] 2025-11-24 15:28:41,285 | INFO     | monitor loop #5808: job 0:6893843632 is in state 'finished'
[2025-11-24 16:29:18] 2025-11-24 15:28:41,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 16:29:18] 2025-11-24 15:28:41,285 | INFO     | sum of deviations: 2595729096958.331
[2025-11-24 16:29:18] 2025-11-24 15:28:41,286 | INFO     | mean x: 1763955165.2725978
[2025-11-24 16:29:18] 2025-11-24 15:28:41,286 | INFO     | mean y: 2819528.800711744
[2025-11-24 16:29:18] 2025-11-24 15:28:41,286 | INFO     | intersect: -5321268965.794927
[2025-11-24 16:29:18] 2025-11-24 15:28:41,288 | INFO     | chi2: 28.55701473617618
[2025-11-24 16:29:18] 2025-11-24 15:28:41,290 | INFO     | sum of square deviations: 850857818364.4681
[2025-11-24 16:29:18] 2025-11-24 15:28:41,361 | INFO     | sum of deviations: 3047752384511.5405
[2025-11-24 16:29:18] 2025-11-24 15:28:41,361 | INFO     | mean x: 1763955012.7771428
[2025-11-24 16:29:18] 2025-11-24 15:28:41,361 | INFO     | mean y: 2827062.3607142856
[2025-11-24 16:29:18] 2025-11-24 15:28:41,362 | INFO     | intersect: -6315617665.216262
[2025-11-24 16:29:18] 2025-11-24 15:28:41,363 | INFO     | chi2: 25.360736661603344
[2025-11-24 16:29:18] 2025-11-24 15:28:41,364 | INFO     | current chi2=25.360736661603344 (change=11.192619761209748 %)
[2025-11-24 16:29:18] 2025-11-24 15:28:41,364 | INFO     | right removable region: 1399
[2025-11-24 16:29:18] 2025-11-24 15:28:41,366 | INFO     | sum of square deviations: 850856727684.4677
[2025-11-24 16:29:18] 2025-11-24 15:28:41,422 | INFO     | sum of deviations: 2011148636868.112
[2025-11-24 16:29:18] 2025-11-24 15:28:41,423 | INFO     | mean x: 1763955317.7771428
[2025-11-24 16:29:18] 2025-11-24 15:28:41,423 | INFO     | mean y: 2829271.8785714284
[2025-11-24 16:29:18] 2025-11-24 15:28:41,423 | INFO     | intersect: -4166587525.8215275
[2025-11-24 16:29:18] 2025-11-24 15:28:41,424 | INFO     | chi2: 23.911991927358883
[2025-11-24 16:29:18] 2025-11-24 15:28:41,425 | INFO     | current chi2=23.911991927358883 (change=16.265785663278574 %)
[2025-11-24 16:29:18] 2025-11-24 15:28:41,425 | INFO     | left removable region: 10
[2025-11-24 16:29:18] 2025-11-24 15:28:41,427 | INFO     | sum of square deviations: 830957821774.3857
[2025-11-24 16:29:18] 2025-11-24 15:28:41,497 | INFO     | sum of deviations: 2078791473811.662
[2025-11-24 16:29:18] 2025-11-24 15:28:41,497 | INFO     | mean x: 1763955287.287257
[2025-11-24 16:29:18] 2025-11-24 15:28:41,497 | INFO     | mean y: 2846736.2915766737
[2025-11-24 16:29:18] 2025-11-24 15:28:41,497 | INFO     | intersect: -4410006859.05415
[2025-11-24 16:29:18] 2025-11-24 15:28:41,499 | INFO     | chi2: 16.82507845089606
[2025-11-24 16:29:18] 2025-11-24 15:28:41,499 | INFO     | current memory leak: 2.50 B/s (using 1389 data points, chi2=16.83)
[2025-11-24 16:29:18] 2025-11-24 15:28:41,502 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-24 16:29:18] 2025-11-24 15:28:41,502 | INFO     | ..............................
[2025-11-24 16:29:18] 2025-11-24 15:28:41,502 | INFO     | . Timing measurements:
[2025-11-24 16:29:18] 2025-11-24 15:28:41,502 | INFO     | . get job = 0 s
[2025-11-24 16:29:18] 2025-11-24 15:28:41,502 | INFO     | . initial setup = 8 s
[2025-11-24 16:29:18] 2025-11-24 15:28:41,502 | INFO     | . payload setup = 150 s
[2025-11-24 16:29:18] 2025-11-24 15:28:41,503 | INFO     | . stage-in = 0 s
[2025-11-24 16:29:18] 2025-11-24 15:28:41,503 | INFO     | . payload execution = 85824 s
[2025-11-24 16:29:18] 2025-11-24 15:28:41,503 | INFO     | . stage-out = 6 s
[2025-11-24 16:29:18] 2025-11-24 15:28:41,503 | INFO     | . log creation = 2 s
[2025-11-24 16:29:18] 2025-11-24 15:28:41,503 | INFO     | ..............................
[2025-11-24 16:29:18] 2025-11-24 15:28:41,645 | INFO     | 
[2025-11-24 16:29:18] 2025-11-24 15:28:41,645 | INFO     | job summary report
[2025-11-24 16:29:18] 2025-11-24 15:28:41,645 | INFO     | --------------------------------------------------
[2025-11-24 16:29:18] 2025-11-24 15:28:41,645 | INFO     | PanDA job id: 6893843632
[2025-11-24 16:29:18] 2025-11-24 15:28:41,645 | INFO     | task id: 47523449
[2025-11-24 16:29:18] 2025-11-24 15:28:41,645 | INFO     | errors: (none)
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | pilot state: finished 
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | transexitcode: 0
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | exeerrorcode: 0
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | exeerrordiag: 
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | exitcode: 0
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | exitmsg: OK
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | cpuconsumptiontime: 340332 s
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | nevents: 1000
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | neventsw: 0
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | pid: 10038
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | pgrp: 10038
[2025-11-24 16:29:18] 2025-11-24 15:28:41,646 | INFO     | corecount: 8
[2025-11-24 16:29:18] 2025-11-24 15:28:41,647 | INFO     | event service: False
[2025-11-24 16:29:18] 2025-11-24 15:28:41,647 | INFO     | sizes: {0: 2298636, 1: 2298835, 12: 2298835, 23: 2298863, 34: 2298891, 44: 2298919, 55: 2299075, 66: 2299103, 77: 2299131, 88: 2299187, 94: 2299477, 98: 2299785, 8
[2025-11-24 16:29:18] 2025-11-24 15:28:41,647 | INFO     | --------------------------------------------------
[2025-11-24 16:29:18] 2025-11-24 15:28:41,647 | INFO     | 
[2025-11-24 16:29:18] 2025-11-24 15:28:41,647 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-24 16:29:18] 2025-11-24 15:28:41,823 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,824 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,824 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,824 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,824 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,824 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,825 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,825 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,825 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,825 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,825 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,825 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 16:29:18] 2025-11-24 15:28:41,825 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,826 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 16:29:18] 2025-11-24 15:28:41,826 | INFO     | job 6893843632 has completed (purged errors)
[2025-11-24 16:29:18] 2025-11-24 15:28:41,826 | INFO     | overall cleanup function is called
[2025-11-24 16:29:18] 2025-11-24 15:28:42,844 | INFO     | --- collectZombieJob: --- 10, [10038]
[2025-11-24 16:29:18] 2025-11-24 15:28:42,844 | INFO     | zombie collector waiting for pid 10038
[2025-11-24 16:29:18] 2025-11-24 15:28:42,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 16:29:18] 2025-11-24 15:28:42,844 | INFO     | collected zombie processes
[2025-11-24 16:29:18] 2025-11-24 15:28:42,844 | INFO     | will attempt to kill all subprocesses of pid=10038
[2025-11-24 16:29:18] 2025-11-24 15:28:42,917 | INFO     | process IDs to be killed: [10038] (in reverse order)
[2025-11-24 16:29:18] 2025-11-24 15:28:43,940 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 16:29:18] 2025-11-24 15:28:43,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 16:29:18] 2025-11-24 15:28:43,943 | INFO     | did not find any defunct processes belonging to 10038
[2025-11-24 16:29:18] 2025-11-24 15:28:43,945 | INFO     | did not find any defunct processes belonging to 10038
[2025-11-24 16:29:18] 2025-11-24 15:28:44,015 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 16:29:18] 2025-11-24 15:28:44,015 | INFO     | ready for new job
[2025-11-24 16:29:18] 2025-11-24 15:28:44,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 16:29:18] 2025-11-24 15:28:44,021 | INFO     | ***************************************
[2025-11-24 16:29:18] 2025-11-24 15:28:44,022 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 16:29:18] 2025-11-24 15:28:44,022 | INFO     | ***************************************
[2025-11-24 16:29:18] 2025-11-24 15:28:44,022 | INFO     | 
[2025-11-24 16:29:18] 2025-11-24 15:28:44,023 | INFO     | pilot is running in a VM
[2025-11-24 16:29:18] 2025-11-24 15:28:44,023 | INFO     | architecture information:
[2025-11-24 16:29:18] 2025-11-24 15:28:44,037 | INFO     | executing command: cat /etc/os-release
[2025-11-24 16:29:18] 2025-11-24 15:28:44,415 | INFO     | cat /etc/os-release:
[2025-11-24 16:29:18] NAME="CentOS Linux"
[2025-11-24 16:29:18] VERSION="7 (Core)"
[2025-11-24 16:29:18] ID="centos"
[2025-11-24 16:29:18] ID_LIKE="rhel fedora"
[2025-11-24 16:29:18] VERSION_ID="7"
[2025-11-24 16:29:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 16:29:18] ANSI_COLOR="0;31"
[2025-11-24 16:29:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 16:29:18] HOME_URL="https://www.centos.org/"
[2025-11-24 16:29:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 16:29:18] 
[2025-11-24 16:29:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 16:29:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 16:29:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 16:29:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 16:29:18] 
[2025-11-24 16:29:18] 2025-11-24 15:28:44,416 | INFO     | ***************************************
[2025-11-24 16:29:18] 2025-11-24 15:28:44,919 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-24 16:29:18] 2025-11-24 15:28:45,254 | INFO     | sufficient remaining disk space (494238957568 B)
[2025-11-24 16:29:18] 2025-11-24 15:28:45,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 16:29:18] 2025-11-24 15:28:45,255 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 16:29:18] 2025-11-24 15:28:45,255 | INFO     | update_server=False
[2025-11-24 16:29:18] 2025-11-24 15:28:45,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 16:29:18] 2025-11-24 15:28:45,255 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:29:18] 2025-11-24 15:28:45,256 | INFO     | aborting loop
[2025-11-24 16:29:18] 2025-11-24 15:28:45,458 | INFO     | all data control threads have been joined
[2025-11-24 16:29:18] 2025-11-24 15:28:45,473 | INFO     | all payload control threads have been joined
[2025-11-24 16:29:18] 2025-11-24 15:28:46,261 | INFO     | [job] retrieve thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:46,262 | INFO     | [job] job monitor thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:46,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 16:29:18] 2025-11-24 15:28:46,278 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:46,464 | INFO     | [data] control thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:46,479 | INFO     | [payload] control thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:46,507 | INFO     | [payload] failed_post thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:46,617 | INFO     | [payload] validate_post thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:46,641 | INFO     | all job control threads have been joined
[2025-11-24 16:29:18] 2025-11-24 15:28:46,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:29:18] 2025-11-24 15:28:46,832 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:47,165 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:47,342 | INFO     | [job] validate thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:47,581 | INFO     | [data] copytool_in thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:47,647 | INFO     | [job] control thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:47,672 | INFO     | [job] queue monitor thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:47,689 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:47,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 16:29:18] 2025-11-24 15:28:48,269 | INFO     | [data] copytool_out thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:28:51,750 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 16:29:18] 2025-11-24 15:29:05,846 | INFO     | [monitor] cgroup control has ended
[2025-11-24 16:29:18] 2025-11-24 15:29:07,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139879493658432)>', '<ExcThread(monitor, started 139879182735104)>']
[2025-11-24 16:29:18] 2025-11-24 15:29:12,571 | INFO     | all workflow threads have been joined
[2025-11-24 16:29:18] 2025-11-24 15:29:12,571 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 16:29:18] 2025-11-24 15:29:12,571 | INFO     | traces error code: 0
[2025-11-24 16:29:18] 2025-11-24 15:29:12,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 16:29:18] 2025-11-24 15:29:14,264 | INFO     | PID=3453 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 16:29:18] 2025-11-24 15:29:14,264 | INFO     | .. there are 2 such processes running
[2025-11-24 16:29:18] 2025-11-24 15:29:14,264 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 16:29:18] 2025-11-24 15:29:14,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 16:29:18] 2025-11-24 15:29:14,264 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 16:29:18] 2025-11-24 15:29:14,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 16:29:18] 2025-11-24 15:29:14,265 | INFO     | [monitor] control thread has ended
[2025-11-24 16:29:18] 2025-11-24 15:29:14,573 [wrapper] ==== pilot stdout END ====
[2025-11-24 16:29:18] 2025-11-24 15:29:14,663 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 16:29:18] 2025-11-24 15:29:14,774 [wrapper] pilotpid: 3453
[2025-11-24 16:29:18] 2025-11-24 15:29:14,859 [wrapper] Pilot exit status: 0
[2025-11-24 16:29:18] 2025-11-24 15:29:15,253 [wrapper] pandaids: 6893843632
[2025-11-24 16:29:18] 2025-11-24 15:29:16,277 [wrapper] cleanup supervisor_pilot  2416 3454
[2025-11-24 16:29:18] 2025-11-24 15:29:16,330 [wrapper] Test setup, not cleaning
[2025-11-24 16:29:18] 2025-11-24 15:29:16,426 [wrapper] apfmon messages muted
[2025-11-24 16:29:18] 2025-11-24 15:29:16,485 [wrapper] ==== wrapper stdout END ====
[2025-11-24 16:29:18] 2025-11-24 15:29:16,594 [wrapper] ==== wrapper stderr END ====
[2025-11-24 16:29:18]  *** Error codes and diagnostics ***
[2025-11-24 16:29:18]     "exeErrorCode": 0,
[2025-11-24 16:29:18]     "exeErrorDiag": "",
[2025-11-24 16:29:18]     "pilotErrorCode": 0,
[2025-11-24 16:29:18]     "pilotErrorDiag": "",
[2025-11-24 16:29:18]  *** Listing of results directory ***
[2025-11-24 16:29:18] total 1331508
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 16:29:18] -rwx------. 1 boinc boinc     36292 Nov 20 11:22 runpilot2-wrapper.sh
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:23 queuedata.json
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc       100 Nov 23 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 16:29:18] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 16:26 run_atlas
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc       105 Nov 23 16:26 job.xml
[2025-11-24 16:29:18] -rw-r--r--. 2 boinc boinc 412291882 Nov 23 16:26 EVNT.47493127._000205.pool.root.1
[2025-11-24 16:29:18] -rw-r--r--. 2 boinc boinc     15847 Nov 23 16:26 start_atlas.sh
[2025-11-24 16:29:18] drwxrwx--x. 2 boinc boinc        68 Nov 23 16:26 shared
[2025-11-24 16:29:18] -rw-r--r--. 2 boinc boinc    590105 Nov 23 16:26 input.tar.gz
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc      6391 Nov 23 16:26 init_data.xml
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc         0 Nov 23 16:26 boinc_lockfile
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc      2786 Nov 23 16:26 pandaJob.out
[2025-11-24 16:29:18] -rw-------. 1 boinc boinc    989785 Nov 23 16:30 agis_schedconf.cvmfs.json
[2025-11-24 16:29:18] drwx------. 5 boinc boinc      4096 Nov 23 16:30 pilot3
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc       533 Nov 24 15:53 boinc_task_state.xml
[2025-11-24 16:29:18] -rw-------. 1 boinc boinc 919301782 Nov 24 16:25 HITS.47523449._002044.pool.root.1
[2025-11-24 16:29:18] -rw-------. 1 boinc boinc      1033 Nov 24 16:26 memory_monitor_summary.json
[2025-11-24 16:29:18] -rw-------. 1 boinc boinc   1516227 Nov 24 16:26 agis_ddmendpoints.agis.ALL.json
[2025-11-24 16:29:18] -rw-------. 1 boinc boinc   2497064 Nov 24 16:26 log.47523449._002044.job.log.tgz.1
[2025-11-24 16:29:18] -rw-------. 1 boinc boinc        95 Nov 24 16:28 pilot_heartbeat.json
[2025-11-24 16:29:18] -rw-------. 1 boinc boinc      8641 Nov 24 16:28 heartbeat.json
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc        29 Nov 24 16:29 wrapper_checkpoint.txt
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc      8192 Nov 24 16:29 boinc_mmap_file
[2025-11-24 16:29:18] -rw-------. 1 boinc boinc       819 Nov 24 16:29 pilotlog.txt
[2025-11-24 16:29:18] -rw-------. 1 boinc boinc  11492023 Nov 24 16:29 log.47523449._002044.job.log.1
[2025-11-24 16:29:18] -rw-------. 1 boinc boinc       353 Nov 24 16:29 output.list
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc       620 Nov 24 16:29 runtime_log
[2025-11-24 16:29:18] -rw-------. 1 boinc boinc  14008320 Nov 24 16:29 result.tar.gz
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc      8817 Nov 24 16:29 runtime_log.err
[2025-11-24 16:29:18] -rw-------. 1 boinc boinc       662 Nov 24 16:29 0KYMDmqyGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlRGKDmFGADXn.diag
[2025-11-24 16:29:18] -rw-r--r--. 1 boinc boinc     21438 Nov 24 16:29 stderr.txt
[2025-11-24 16:29:19] HITS file was successfully produced:
[2025-11-24 16:29:19] -rw-------. 1 boinc boinc 919301782 Nov 24 16:25 shared/HITS.pool.root.1
[2025-11-24 16:29:19]  *** Contents of shared directory: ***
[2025-11-24 16:29:19] total 1314664
[2025-11-24 16:29:19] -rw-r--r--. 2 boinc boinc 412291882 Nov 23 16:26 ATLAS.root_0
[2025-11-24 16:29:19] -rw-r--r--. 2 boinc boinc     15847 Nov 23 16:26 start_atlas.sh
[2025-11-24 16:29:19] -rw-r--r--. 2 boinc boinc    590105 Nov 23 16:26 input.tar.gz
[2025-11-24 16:29:19] -rw-------. 1 boinc boinc 919301782 Nov 24 16:25 HITS.pool.root.1
[2025-11-24 16:29:19] -rw-------. 1 boinc boinc  14008320 Nov 24 16:29 result.tar.gz
16:29:21 (31993): run_atlas exited; CPU time 340688.272485
16:29:21 (31993): called boinc_finish(0)

</stderr_txt>
]]>

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