Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:19:13 (700676): wrapper (7.7.26015): starting
01:19:13 (700676): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 01:19:13] Arguments: --nthreads 4
[2025-11-27 01:19:13] Threads: 4
[2025-11-27 01:19:13] Checking for CVMFS
[2025-11-27 01:19:13] No cvmfs_config command found, will try listing directly
[2025-11-27 01:19:13] CVMFS is ok
[2025-11-27 01:19:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:19:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:19:13] Further information can be found at the LHC@home message board.
[2025-11-27 01:19:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:19:13] Checking for apptainer binary...
[2025-11-27 01:19:13] which: no apptainer in ((null))
[2025-11-27 01:19:13] apptainer is not installed, using version from CVMFS
[2025-11-27 01:19:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:19:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-11-27 01:19:13] apptainer works
[2025-11-27 01:19:13] Set ATHENA_PROC_NUMBER=4
[2025-11-27 01:19:13] Set ATHENA_CORE_NUMBER=4
[2025-11-27 01:19:13] Starting ATLAS job with PandaID=6893854872
[2025-11-27 01:19:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:29:59 (1258989): wrapper (7.7.26015): starting
08:29:59 (1258989): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 08:29:59] Arguments: --nthreads 4
[2025-11-27 08:29:59] Threads: 4
[2025-11-27 08:29:59] This job has been restarted, cleaning up previous attempt
[2025-11-27 08:29:59] Checking for CVMFS
[2025-11-27 08:29:59] No cvmfs_config command found, will try listing directly
[2025-11-27 08:29:59] CVMFS is ok
[2025-11-27 08:29:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 08:29:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 08:29:59] Further information can be found at the LHC@home message board.
[2025-11-27 08:29:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 08:29:59] Checking for apptainer binary...
[2025-11-27 08:29:59] which: no apptainer in ((null))
[2025-11-27 08:29:59] apptainer is not installed, using version from CVMFS
[2025-11-27 08:29:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 08:29:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-11-27 08:29:59] apptainer works
[2025-11-27 08:29:59] Set ATHENA_PROC_NUMBER=4
[2025-11-27 08:29:59] Set ATHENA_CORE_NUMBER=4
[2025-11-27 08:29:59] Starting ATLAS job with PandaID=6893854872
[2025-11-27 08:29:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:28:48]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:28:48] 2025-11-27 22:25:11,213 | INFO     | 53698s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 23:28:48] 2025-11-27 22:25:11,380 | INFO     | monitor loop #3635: job 0:6893854872 is in state 'finished'
[2025-11-27 23:28:48] 2025-11-27 22:25:11,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:28:48] 2025-11-27 22:25:12,078 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 23:28:48] 2025-11-27 22:25:12,098 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2685.8371015624994
[2025-11-27 23:28:48] 2025-11-27 22:25:12,122 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6893854872/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 23:28:48] 2025-11-27 22:25:12,123 | INFO     | extracted standard info from prmon json
[2025-11-27 23:28:48] 2025-11-27 22:25:12,123 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 23:28:48] 2025-11-27 22:25:12,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 23:28:48] 2025-11-27 22:25:12,137 | INFO     | fitting pss+swap vs Time
[2025-11-27 23:28:48] 2025-11-27 22:25:12,139 | INFO     | sum of square deviations: 211312836460.0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,155 | INFO     | sum of deviations: 616434339749.4999
[2025-11-27 23:28:48] 2025-11-27 22:25:12,155 | INFO     | mean x: 1764255458.5
[2025-11-27 23:28:48] 2025-11-27 22:25:12,155 | INFO     | mean y: 2283323.778409091
[2025-11-27 23:28:48] 2025-11-27 22:25:12,155 | INFO     | intersect: -5144340359.519523
[2025-11-27 23:28:48] 2025-11-27 22:25:12,156 | INFO     | chi2: 4.227880948148094
[2025-11-27 23:28:48] 2025-11-27 22:25:12,157 | INFO     | sum of square deviations: 207731336750.0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,173 | INFO     | sum of deviations: 807886115663.0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,173 | INFO     | mean x: 1764255306.0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,173 | INFO     | mean y: 2291468.694857143
[2025-11-27 23:28:48] 2025-11-27 22:25:12,173 | INFO     | intersect: -6859058332.936251
[2025-11-27 23:28:48] 2025-11-27 22:25:12,174 | INFO     | chi2: 1.9386568004703988
[2025-11-27 23:28:48] 2025-11-27 22:25:12,175 | INFO     | current chi2=1.9386568004703988 (change=54.14589899179698 %)
[2025-11-27 23:28:48] 2025-11-27 22:25:12,175 | INFO     | sum of square deviations: 204190535477.5
[2025-11-27 23:28:48] 2025-11-27 22:25:12,193 | INFO     | sum of deviations: 814452993681.0002
[2025-11-27 23:28:48] 2025-11-27 22:25:12,193 | INFO     | mean x: 1764255153.5
[2025-11-27 23:28:48] 2025-11-27 22:25:12,193 | INFO     | mean y: 2291749.0298850574
[2025-11-27 23:28:48] 2025-11-27 22:25:12,193 | INFO     | intersect: -7034777270.966596
[2025-11-27 23:28:48] 2025-11-27 22:25:12,194 | INFO     | chi2: 1.8996786527678589
[2025-11-27 23:28:48] 2025-11-27 22:25:12,194 | INFO     | current chi2=1.8996786527678589 (change=2.010574934825092 %)
[2025-11-27 23:28:48] 2025-11-27 22:25:12,194 | INFO     | right removable region: 869
[2025-11-27 23:28:48] 2025-11-27 22:25:12,195 | INFO     | sum of square deviations: 207731336750.0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,213 | INFO     | sum of deviations: 460258854381.0001
[2025-11-27 23:28:48] 2025-11-27 22:25:12,213 | INFO     | mean x: 1764255611.0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,213 | INFO     | mean y: 2289960.1394285713
[2025-11-27 23:28:48] 2025-11-27 22:25:12,213 | INFO     | intersect: -3906673795.9228177
[2025-11-27 23:28:48] 2025-11-27 22:25:12,217 | INFO     | chi2: 2.4419969045750176
[2025-11-27 23:28:48] 2025-11-27 22:25:12,217 | INFO     | current chi2=2.4419969045750176 (change=42.240641718053425 %)
[2025-11-27 23:28:48] 2025-11-27 22:25:12,218 | INFO     | sum of square deviations: 204190535477.5
[2025-11-27 23:28:48] 2025-11-27 22:25:12,236 | INFO     | sum of deviations: 435751084186.49976
[2025-11-27 23:28:48] 2025-11-27 22:25:12,236 | INFO     | mean x: 1764255763.5
[2025-11-27 23:28:48] 2025-11-27 22:25:12,236 | INFO     | mean y: 2291015.893103448
[2025-11-27 23:28:48] 2025-11-27 22:25:12,236 | INFO     | intersect: -3762704065.4392447
[2025-11-27 23:28:48] 2025-11-27 22:25:12,237 | INFO     | chi2: 2.4276038958730917
[2025-11-27 23:28:48] 2025-11-27 22:25:12,237 | INFO     | current chi2=2.4276038958730917 (change=0.5893950428422338 %)
[2025-11-27 23:28:48] 2025-11-27 22:25:12,237 | INFO     | left removable region: 20
[2025-11-27 23:28:48] 2025-11-27 22:25:12,238 | INFO     | sum of square deviations: 189758348600.0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,254 | INFO     | sum of deviations: 586209513768.9999
[2025-11-27 23:28:48] 2025-11-27 22:25:12,254 | INFO     | mean x: 1764255733.0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,254 | INFO     | mean y: 2301623.101295642
[2025-11-27 23:28:48] 2025-11-27 22:25:12,255 | INFO     | intersect: -5447911782.719314
[2025-11-27 23:28:48] 2025-11-27 22:25:12,256 | INFO     | chi2: 0.06995577225234163
[2025-11-27 23:28:48] 2025-11-27 22:25:12,256 | INFO     | current memory leak: 3.09 B/s (using 849 data points, chi2=0.07)
[2025-11-27 23:28:48] 2025-11-27 22:25:12,257 | INFO     | could have reported an average CPU frequency of 2687 MHz (33 samples)
[2025-11-27 23:28:48] 2025-11-27 22:25:12,257 | INFO     | ..............................
[2025-11-27 23:28:48] 2025-11-27 22:25:12,257 | INFO     | . Timing measurements:
[2025-11-27 23:28:48] 2025-11-27 22:25:12,257 | INFO     | . get job = 0 s
[2025-11-27 23:28:48] 2025-11-27 22:25:12,257 | INFO     | . initial setup = 1 s
[2025-11-27 23:28:48] 2025-11-27 22:25:12,258 | INFO     | . payload setup = 9 s
[2025-11-27 23:28:48] 2025-11-27 22:25:12,258 | INFO     | . stage-in = 0 s
[2025-11-27 23:28:48] 2025-11-27 22:25:12,258 | INFO     | . payload execution = 53652 s
[2025-11-27 23:28:48] 2025-11-27 22:25:12,258 | INFO     | . stage-out = 2 s
[2025-11-27 23:28:48] 2025-11-27 22:25:12,258 | INFO     | . log creation = 0 s
[2025-11-27 23:28:48] 2025-11-27 22:25:12,258 | INFO     | ..............................
[2025-11-27 23:28:48] 2025-11-27 22:25:12,627 | INFO     | 
[2025-11-27 23:28:48] 2025-11-27 22:25:12,627 | INFO     | job summary report
[2025-11-27 23:28:48] 2025-11-27 22:25:12,627 | INFO     | --------------------------------------------------
[2025-11-27 23:28:48] 2025-11-27 22:25:12,627 | INFO     | PanDA job id: 6893854872
[2025-11-27 23:28:48] 2025-11-27 22:25:12,627 | INFO     | task id: 47523449
[2025-11-27 23:28:48] 2025-11-27 22:25:12,628 | INFO     | errors: (none)
[2025-11-27 23:28:48] 2025-11-27 22:25:12,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 23:28:48] 2025-11-27 22:25:12,628 | INFO     | pilot state: finished 
[2025-11-27 23:28:48] 2025-11-27 22:25:12,628 | INFO     | transexitcode: 0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,628 | INFO     | exeerrorcode: 0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,628 | INFO     | exeerrordiag: 
[2025-11-27 23:28:48] 2025-11-27 22:25:12,628 | INFO     | exitcode: 0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,628 | INFO     | exitmsg: OK
[2025-11-27 23:28:48] 2025-11-27 22:25:12,628 | INFO     | cpuconsumptiontime: 212736 s
[2025-11-27 23:28:48] 2025-11-27 22:25:12,628 | INFO     | nevents: 1000
[2025-11-27 23:28:48] 2025-11-27 22:25:12,628 | INFO     | neventsw: 0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,629 | INFO     | pid: 1272113
[2025-11-27 23:28:48] 2025-11-27 22:25:12,629 | INFO     | pgrp: 1272113
[2025-11-27 23:28:48] 2025-11-27 22:25:12,629 | INFO     | corecount: 4
[2025-11-27 23:28:48] 2025-11-27 22:25:12,629 | INFO     | event service: False
[2025-11-27 23:28:48] 2025-11-27 22:25:12,629 | INFO     | sizes: {0: 2284156, 1: 2284355, 7: 2284617, 11: 2284645, 53666: 2336706, 53667: 2336705, 53670: 2345907, 53674: 2345963, 53681: 2346273}
[2025-11-27 23:28:48] 2025-11-27 22:25:12,629 | INFO     | --------------------------------------------------
[2025-11-27 23:28:48] 2025-11-27 22:25:12,629 | INFO     | 
[2025-11-27 23:28:48] 2025-11-27 22:25:12,629 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-11-27 23:28:48] 2025-11-27 22:25:12,661 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,662 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,662 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,662 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,662 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,662 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,662 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,662 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,663 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,663 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,663 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 23:28:48] 2025-11-27 22:25:12,663 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,663 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 23:28:48] 2025-11-27 22:25:12,663 | INFO     | job 6893854872 has completed (purged errors)
[2025-11-27 23:28:48] 2025-11-27 22:25:12,663 | INFO     | overall cleanup function is called
[2025-11-27 23:28:48] 2025-11-27 22:25:13,680 | INFO     | --- collectZombieJob: --- 10, [1272113]
[2025-11-27 23:28:48] 2025-11-27 22:25:13,681 | INFO     | zombie collector waiting for pid 1272113
[2025-11-27 23:28:48] 2025-11-27 22:25:13,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 23:28:48] 2025-11-27 22:25:13,681 | INFO     | collected zombie processes
[2025-11-27 23:28:48] 2025-11-27 22:25:13,681 | INFO     | will attempt to kill all subprocesses of pid=1272113
[2025-11-27 23:28:48] 2025-11-27 22:25:14,510 | INFO     | process IDs to be killed: [1272113] (in reverse order)
[2025-11-27 23:28:48] 2025-11-27 22:25:14,754 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 23:28:48] 2025-11-27 22:25:14,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 23:28:48] 2025-11-27 22:25:14,787 | INFO     | did not find any defunct processes belonging to 1272113
[2025-11-27 23:28:48] 2025-11-27 22:25:14,819 | INFO     | did not find any defunct processes belonging to 1272113
[2025-11-27 23:28:48] 2025-11-27 22:25:14,820 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:28:48] 2025-11-27 22:25:14,820 | INFO     | ready for new job
[2025-11-27 23:28:48] 2025-11-27 22:25:14,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:28:48] 2025-11-27 22:25:14,827 | INFO     | ***************************************
[2025-11-27 23:28:48] 2025-11-27 22:25:14,827 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:28:48] 2025-11-27 22:25:14,827 | INFO     | ***************************************
[2025-11-27 23:28:48] 2025-11-27 22:25:14,828 | INFO     | 
[2025-11-27 23:28:48] 2025-11-27 22:25:14,836 | INFO     | architecture information:
[2025-11-27 23:28:48] 2025-11-27 22:25:14,837 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:28:48] 2025-11-27 22:25:14,859 | INFO     | cat /etc/os-release:
[2025-11-27 23:28:48] NAME="CentOS Linux"
[2025-11-27 23:28:48] VERSION="7 (Core)"
[2025-11-27 23:28:48] ID="centos"
[2025-11-27 23:28:48] ID_LIKE="rhel fedora"
[2025-11-27 23:28:48] VERSION_ID="7"
[2025-11-27 23:28:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:28:48] ANSI_COLOR="0;31"
[2025-11-27 23:28:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:28:48] HOME_URL="https://www.centos.org/"
[2025-11-27 23:28:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:28:48] 
[2025-11-27 23:28:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:28:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:28:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:28:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:28:48] 
[2025-11-27 23:28:48] 2025-11-27 22:25:14,859 | INFO     | ***************************************
[2025-11-27 23:28:48] 2025-11-27 22:25:15,362 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-11-27 23:28:48] 2025-11-27 22:25:15,388 | INFO     | sufficient remaining disk space (3295658639360 B)
[2025-11-27 23:28:48] 2025-11-27 22:25:15,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:28:48] 2025-11-27 22:25:15,389 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:28:48] 2025-11-27 22:25:15,389 | INFO     | update_server=False
[2025-11-27 23:28:48] 2025-11-27 22:25:15,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:28:48] 2025-11-27 22:25:15,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:28:48] 2025-11-27 22:25:15,390 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:28:48] 2025-11-27 22:25:15,390 | INFO     | aborting loop
[2025-11-27 23:28:48] 2025-11-27 22:25:15,449 | INFO     | all payload control threads have been joined
[2025-11-27 23:28:48] 2025-11-27 22:25:15,940 | INFO     | all job control threads have been joined
[2025-11-27 23:28:48] 2025-11-27 22:25:15,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:28:48] 2025-11-27 22:25:16,394 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:16,395 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:16,401 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:16,420 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:16,453 | INFO     | [payload] control thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:16,484 | INFO     | all data control threads have been joined
[2025-11-27 23:28:48] 2025-11-27 22:25:16,662 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:16,680 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:16,929 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:16,945 | INFO     | [job] control thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:17,050 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:17,155 | INFO     | [job] validate thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:17,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:28:48] 2025-11-27 22:25:17,395 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:17,486 | INFO     | [data] control thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:17,629 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:18,380 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:19,984 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:28:48] 2025-11-27 22:25:39,515 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:28:48] 2025-11-27 22:25:41,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23443604723520)>', '<ExcThread(monitor, started 23443370120960)>']
[2025-11-27 23:28:48] 2025-11-27 22:25:45,308 | INFO     | PID=1263707 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 23:28:48] 2025-11-27 22:25:45,308 | INFO     | .. there are 6 such processes running
[2025-11-27 23:28:48] 2025-11-27 22:25:45,309 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:28:48] 2025-11-27 22:25:45,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:28:48] 2025-11-27 22:25:45,310 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:28:48] 2025-11-27 22:25:45,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:28:48] 2025-11-27 22:25:45,310 | INFO     | [monitor] control thread has ended
[2025-11-27 23:28:48] 2025-11-27 22:25:46,466 | INFO     | all workflow threads have been joined
[2025-11-27 23:28:48] 2025-11-27 22:25:46,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:28:48] 2025-11-27 22:25:46,467 | INFO     | traces error code: 0
[2025-11-27 23:28:48] 2025-11-27 22:25:46,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:28:48] 2025-11-27 22:25:46,659 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:28:48] 2025-11-27 22:25:46,663 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:28:48] 2025-11-27 22:25:46,666 [wrapper] pilotpid: 1263707
[2025-11-27 23:28:48] 2025-11-27 22:25:46,670 [wrapper] Pilot exit status: 0
[2025-11-27 23:28:48] 2025-11-27 22:25:46,685 [wrapper] pandaids: 6893854872 6893854872
[2025-11-27 23:28:48] 2025-11-27 22:25:46,862 [wrapper] cleanup supervisor_pilot 2418305 1263708
[2025-11-27 23:28:48] 2025-11-27 22:25:46,868 [wrapper] Test setup, not cleaning
[2025-11-27 23:28:48] 2025-11-27 22:25:46,873 [wrapper] apfmon messages muted
[2025-11-27 23:28:48] 2025-11-27 22:25:46,877 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:28:48] 2025-11-27 22:25:46,881 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:28:48]  *** Error codes and diagnostics ***
[2025-11-27 23:28:48]     "exeErrorCode": 0,
[2025-11-27 23:28:48]     "exeErrorDiag": "",
[2025-11-27 23:28:48]     "pilotErrorCode": 0,
[2025-11-27 23:28:48]     "pilotErrorDiag": "",
[2025-11-27 23:28:48]  *** Listing of results directory ***
[2025-11-27 23:28:48] total 1715224
[2025-11-27 23:28:48] drwx------ 5 boinc boinc      4096 Nov  5 18:16 pilot3
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:26 queuedata.json
[2025-11-27 23:28:48] -rwx------ 1 boinc boinc     36292 Nov 20 13:26 runpilot2-wrapper.sh
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc       100 Nov 27 01:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:28:48] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 01:19 run_atlas
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc       105 Nov 27 01:19 job.xml
[2025-11-27 23:28:48] -rw-r--r-- 3 boinc boinc 408810051 Nov 27 01:19 EVNT.47493127._000427.pool.root.1
[2025-11-27 23:28:48] -rw-r--r-- 3 boinc boinc 408810051 Nov 27 01:19 ATLAS.root_0
[2025-11-27 23:28:48] -rw-r--r-- 2 boinc boinc     15847 Nov 27 01:19 start_atlas.sh
[2025-11-27 23:28:48] drwxrwx--x 2 boinc boinc      4096 Nov 27 01:19 shared
[2025-11-27 23:28:48] -rw-r--r-- 2 boinc boinc    590099 Nov 27 01:19 input.tar.gz
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc         0 Nov 27 01:19 boinc_lockfile
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc      2786 Nov 27 08:29 pandaJob.out
[2025-11-27 23:28:48] -rw------- 1 boinc boinc    991570 Nov 27 08:30 agis_schedconf.cvmfs.json
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc      6697 Nov 27 11:22 init_data.xml
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc       532 Nov 27 23:17 boinc_task_state.xml
[2025-11-27 23:28:48] -rw------- 1 boinc boinc 916739043 Nov 27 23:24 HITS.47523449._004269.pool.root.1
[2025-11-27 23:28:48] -rw------- 1 boinc boinc      1039 Nov 27 23:24 memory_monitor_summary.json
[2025-11-27 23:28:48] -rw------- 1 boinc boinc   1516240 Nov 27 23:25 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:28:48] -rw------- 1 boinc boinc   1630284 Nov 27 23:25 log.47523449._004269.job.log.tgz.1
[2025-11-27 23:28:48] -rw------- 1 boinc boinc      8594 Nov 27 23:25 heartbeat.json
[2025-11-27 23:28:48] -rw------- 1 boinc boinc        97 Nov 27 23:25 pilot_heartbeat.json
[2025-11-27 23:28:48] -rw------- 1 boinc boinc      4835 Nov 27 23:25 pilotlog.txt
[2025-11-27 23:28:48] -rw------- 1 boinc boinc   7417632 Nov 27 23:25 log.47523449._004269.job.log.1
[2025-11-27 23:28:48] -rw------- 1 boinc boinc       353 Nov 27 23:25 output.list
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc       620 Nov 27 23:25 runtime_log
[2025-11-27 23:28:48] -rw------- 1 boinc boinc   9072640 Nov 27 23:25 result.tar.gz
[2025-11-27 23:28:48] -rw------- 1 boinc boinc       795 Nov 27 23:25 w2zKDmXvIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWcGKDmQKWzNm.diag
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc      9300 Nov 27 23:25 runtime_log.err
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc        28 Nov 27 23:28 wrapper_checkpoint.txt
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc      8192 Nov 27 23:28 boinc_mmap_file
[2025-11-27 23:28:48] -rw-r--r-- 1 boinc boinc     23022 Nov 27 23:28 stderr.txt
[2025-11-27 23:28:48] HITS file was successfully produced:
[2025-11-27 23:28:48] -rw------- 1 boinc boinc 916739043 Nov 27 23:24 shared/HITS.pool.root.1
[2025-11-27 23:28:48]  *** Contents of shared directory: ***
[2025-11-27 23:28:48] total 1303952
[2025-11-27 23:28:48] -rw-r--r-- 3 boinc boinc 408810051 Nov 27 01:19 ATLAS.root_0
[2025-11-27 23:28:48] -rw-r--r-- 2 boinc boinc     15847 Nov 27 01:19 start_atlas.sh
[2025-11-27 23:28:48] -rw-r--r-- 2 boinc boinc    590099 Nov 27 01:19 input.tar.gz
[2025-11-27 23:28:48] -rw------- 1 boinc boinc 916739043 Nov 27 23:24 HITS.pool.root.1
[2025-11-27 23:28:48] -rw------- 1 boinc boinc   9072640 Nov 27 23:25 result.tar.gz
23:28:49 (1258989): run_atlas exited; CPU time 215474.840017
23:28:49 (1258989): called boinc_finish(0)

</stderr_txt>
]]>

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