Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:48:12 (32562): wrapper (7.7.26015): starting
17:48:12 (32562): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 17:48:12] Arguments: --nthreads 8
[2025-11-23 17:48:12] Threads: 8
[2025-11-23 17:48:12] Checking for CVMFS
[2025-11-23 17:48:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 17:48:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 17:48:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 17:48:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 17:48:14] 2.11.2.0 20606 77425 98592 153215 3 128 22029952 25165825 4296 130560 3 24797803 99.908 11411879 1952 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 17:48:14] CVMFS is ok
[2025-11-23 17:48:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 17:48:14] Checking for apptainer binary...
[2025-11-23 17:48:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 17:48:14] Running /usr/bin/apptainer --version
[2025-11-23 17:48:15] apptainer version 1.3.2-1.el7
[2025-11-23 17:48:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 17:48:20] cg-vwn476.simple-grid.lan
[2025-11-23 17:48:20] apptainer works
[2025-11-23 17:48:20] Set ATHENA_PROC_NUMBER=8
[2025-11-23 17:48:20] Set ATHENA_CORE_NUMBER=8
[2025-11-23 17:48:20] Starting ATLAS job with PandaID=6893852140
[2025-11-23 17:48:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 14:43:47]  *** The last 200 lines of the pilot log: ***
[2025-11-24 14:43:47] 2025-11-24 13:42:58,731 | INFO     | monitor loop #5071: job 0:6893852140 is in state 'finished'
[2025-11-24 14:43:47] 2025-11-24 13:42:58,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:43:47] 2025-11-24 13:43:00,269 | INFO     | time since job start (75106s) is within the limit (172800.0s)
[2025-11-24 14:43:47] 2025-11-24 13:43:01,236 | INFO     | monitor loop #5072: job 0:6893852140 is in state 'finished'
[2025-11-24 14:43:47] 2025-11-24 13:43:01,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:43:47] 2025-11-24 13:43:02,278 | INFO     | time since job start (75108s) is within the limit (172800.0s)
[2025-11-24 14:43:47] 2025-11-24 13:43:03,747 | INFO     | monitor loop #5073: job 0:6893852140 is in state 'finished'
[2025-11-24 14:43:47] 2025-11-24 13:43:03,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:43:47] 2025-11-24 13:43:04,289 | INFO     | time since job start (75110s) is within the limit (172800.0s)
[2025-11-24 14:43:47] 2025-11-24 13:43:06,252 | INFO     | monitor loop #5074: job 0:6893852140 is in state 'finished'
[2025-11-24 14:43:47] 2025-11-24 13:43:06,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:43:47] 2025-11-24 13:43:06,300 | INFO     | time since job start (75112s) is within the limit (172800.0s)
[2025-11-24 14:43:47] 2025-11-24 13:43:08,311 | INFO     | time since job start (75114s) is within the limit (172800.0s)
[2025-11-24 14:43:47] 2025-11-24 13:43:08,755 | INFO     | monitor loop #5075: job 0:6893852140 is in state 'finished'
[2025-11-24 14:43:47] 2025-11-24 13:43:08,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:43:47] 2025-11-24 13:43:09,992 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 14:43:47] 2025-11-24 13:43:09,993 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-24 14:43:47] 2025-11-24 13:43:09,995 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6893852140/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 14:43:47] 2025-11-24 13:43:09,996 | INFO     | extracted standard info from prmon json
[2025-11-24 14:43:47] 2025-11-24 13:43:09,996 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 14:43:47] 2025-11-24 13:43:09,996 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 14:43:47] 2025-11-24 13:43:10,023 | INFO     | fitting pss+swap vs Time
[2025-11-24 14:43:47] 2025-11-24 13:43:10,024 | INFO     | sum of square deviations: 567219159257.7921
[2025-11-24 14:43:47] 2025-11-24 13:43:10,099 | INFO     | sum of deviations: 888687180945.3826
[2025-11-24 14:43:47] 2025-11-24 13:43:10,100 | INFO     | mean x: 1763954409.154538
[2025-11-24 14:43:47] 2025-11-24 13:43:10,100 | INFO     | mean y: 2826504.0932134097
[2025-11-24 14:43:47] 2025-11-24 13:43:10,100 | INFO     | intersect: -2760838378.5227723
[2025-11-24 14:43:47] 2025-11-24 13:43:10,110 | INFO     | chi2: 23.054439679086343
[2025-11-24 14:43:47] 2025-11-24 13:43:10,112 | INFO     | sum of square deviations: 560290985583.6007
[2025-11-24 14:43:47] 2025-11-24 13:43:10,182 | INFO     | sum of deviations: 1289294657306.706
[2025-11-24 14:43:47] 2025-11-24 13:43:10,182 | INFO     | mean x: 1763954256.6592774
[2025-11-24 14:43:47] 2025-11-24 13:43:10,182 | INFO     | mean y: 2835320.70771757
[2025-11-24 14:43:47] 2025-11-24 13:43:10,182 | INFO     | intersect: -4056228375.409678
[2025-11-24 14:43:47] 2025-11-24 13:43:10,184 | INFO     | chi2: 19.683366868657025
[2025-11-24 14:43:47] 2025-11-24 13:43:10,184 | INFO     | current chi2=19.683366868657025 (change=14.622228331523324 %)
[2025-11-24 14:43:47] 2025-11-24 13:43:10,184 | INFO     | right removable region: 1217
[2025-11-24 14:43:47] 2025-11-24 13:43:10,186 | INFO     | sum of square deviations: 560290124263.6007
[2025-11-24 14:43:47] 2025-11-24 13:43:10,244 | INFO     | sum of deviations: 479789419867.18915
[2025-11-24 14:43:47] 2025-11-24 13:43:10,244 | INFO     | mean x: 1763954561.6592774
[2025-11-24 14:43:47] 2025-11-24 13:43:10,245 | INFO     | mean y: 2835499.169129721
[2025-11-24 14:43:47] 2025-11-24 13:43:10,245 | INFO     | intersect: -1507679677.0941126
[2025-11-24 14:43:47] 2025-11-24 13:43:10,246 | INFO     | chi2: 20.077644632967008
[2025-11-24 14:43:47] 2025-11-24 13:43:10,246 | INFO     | current chi2=20.077644632967008 (change=12.912025135096696 %)
[2025-11-24 14:43:47] 2025-11-24 13:43:10,247 | INFO     | left removable region: 10
[2025-11-24 14:43:47] 2025-11-24 13:43:10,250 | INFO     | sum of square deviations: 545246664733.5266
[2025-11-24 14:43:47] 2025-11-24 13:43:10,326 | INFO     | time since job start (75116s) is within the limit (172800.0s)
[2025-11-24 14:43:47] 2025-11-24 13:43:10,333 | INFO     | sum of deviations: 850768220673.2148
[2025-11-24 14:43:47] 2025-11-24 13:43:10,334 | INFO     | mean x: 1763954531.1665287
[2025-11-24 14:43:47] 2025-11-24 13:43:10,334 | INFO     | mean y: 2848915.3123446563
[2025-11-24 14:43:47] 2025-11-24 13:43:10,334 | INFO     | intersect: -2749513556.3818817
[2025-11-24 14:43:47] 2025-11-24 13:43:10,335 | INFO     | chi2: 15.659760237651463
[2025-11-24 14:43:47] 2025-11-24 13:43:10,336 | INFO     | current memory leak: 1.56 B/s (using 1207 data points, chi2=15.66)
[2025-11-24 14:43:47] 2025-11-24 13:43:10,337 | INFO     | could have reported an average CPU frequency of 2249 MHz (41 samples)
[2025-11-24 14:43:47] 2025-11-24 13:43:10,337 | INFO     | ..............................
[2025-11-24 14:43:47] 2025-11-24 13:43:10,337 | INFO     | . Timing measurements:
[2025-11-24 14:43:47] 2025-11-24 13:43:10,337 | INFO     | . get job = 0 s
[2025-11-24 14:43:47] 2025-11-24 13:43:10,337 | INFO     | . initial setup = 10 s
[2025-11-24 14:43:47] 2025-11-24 13:43:10,337 | INFO     | . payload setup = 159 s
[2025-11-24 14:43:47] 2025-11-24 13:43:10,337 | INFO     | . stage-in = 0 s
[2025-11-24 14:43:47] 2025-11-24 13:43:10,338 | INFO     | . payload execution = 74678 s
[2025-11-24 14:43:47] 2025-11-24 13:43:10,338 | INFO     | . stage-out = 6 s
[2025-11-24 14:43:47] 2025-11-24 13:43:10,338 | INFO     | . log creation = 2 s
[2025-11-24 14:43:47] 2025-11-24 13:43:10,338 | INFO     | ..............................
[2025-11-24 14:43:47] 2025-11-24 13:43:10,478 | INFO     | 
[2025-11-24 14:43:47] 2025-11-24 13:43:10,478 | INFO     | job summary report
[2025-11-24 14:43:47] 2025-11-24 13:43:10,479 | INFO     | --------------------------------------------------
[2025-11-24 14:43:47] 2025-11-24 13:43:10,479 | INFO     | PanDA job id: 6893852140
[2025-11-24 14:43:47] 2025-11-24 13:43:10,479 | INFO     | task id: 47523449
[2025-11-24 14:43:47] 2025-11-24 13:43:10,479 | INFO     | errors: (none)
[2025-11-24 14:43:47] 2025-11-24 13:43:10,479 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 14:43:47] 2025-11-24 13:43:10,479 | INFO     | pilot state: finished 
[2025-11-24 14:43:47] 2025-11-24 13:43:10,479 | INFO     | transexitcode: 0
[2025-11-24 14:43:47] 2025-11-24 13:43:10,479 | INFO     | exeerrorcode: 0
[2025-11-24 14:43:47] 2025-11-24 13:43:10,479 | INFO     | exeerrordiag: 
[2025-11-24 14:43:47] 2025-11-24 13:43:10,479 | INFO     | exitcode: 0
[2025-11-24 14:43:47] 2025-11-24 13:43:10,479 | INFO     | exitmsg: OK
[2025-11-24 14:43:47] 2025-11-24 13:43:10,480 | INFO     | cpuconsumptiontime: 303840 s
[2025-11-24 14:43:47] 2025-11-24 13:43:10,480 | INFO     | nevents: 1000
[2025-11-24 14:43:47] 2025-11-24 13:43:10,480 | INFO     | neventsw: 0
[2025-11-24 14:43:47] 2025-11-24 13:43:10,480 | INFO     | pid: 10904
[2025-11-24 14:43:47] 2025-11-24 13:43:10,480 | INFO     | pgrp: 10904
[2025-11-24 14:43:47] 2025-11-24 13:43:10,480 | INFO     | corecount: 8
[2025-11-24 14:43:47] 2025-11-24 13:43:10,480 | INFO     | event service: False
[2025-11-24 14:43:47] 2025-11-24 13:43:10,480 | INFO     | sizes: {0: 2298636, 1: 2298835, 2: 2298835, 12: 2298863, 23: 2298891, 34: 2298919, 44: 2299075, 55: 2299103, 66: 2299131, 71: 2299421, 77: 2299449, 74842: 2354770,
[2025-11-24 14:43:47] 2025-11-24 13:43:10,480 | INFO     | --------------------------------------------------
[2025-11-24 14:43:47] 2025-11-24 13:43:10,481 | INFO     | 
[2025-11-24 14:43:47] 2025-11-24 13:43:10,481 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-24 14:43:47] 2025-11-24 13:43:11,030 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,031 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,031 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,031 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,031 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,031 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,031 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,031 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,032 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,032 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,032 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,032 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,032 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,032 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,032 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,032 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 14:43:47] 2025-11-24 13:43:11,032 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,032 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 14:43:47] 2025-11-24 13:43:11,033 | INFO     | job 6893852140 has completed (purged errors)
[2025-11-24 14:43:47] 2025-11-24 13:43:11,033 | INFO     | overall cleanup function is called
[2025-11-24 14:43:47] 2025-11-24 13:43:12,056 | INFO     | --- collectZombieJob: --- 10, [10904]
[2025-11-24 14:43:47] 2025-11-24 13:43:12,056 | INFO     | zombie collector waiting for pid 10904
[2025-11-24 14:43:47] 2025-11-24 13:43:12,056 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 14:43:47] 2025-11-24 13:43:12,057 | INFO     | collected zombie processes
[2025-11-24 14:43:47] 2025-11-24 13:43:12,057 | INFO     | will attempt to kill all subprocesses of pid=10904
[2025-11-24 14:43:47] 2025-11-24 13:43:12,152 | INFO     | process IDs to be killed: [10904] (in reverse order)
[2025-11-24 14:43:47] 2025-11-24 13:43:13,200 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 14:43:47] 2025-11-24 13:43:13,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 14:43:47] 2025-11-24 13:43:13,203 | INFO     | did not find any defunct processes belonging to 10904
[2025-11-24 14:43:47] 2025-11-24 13:43:13,213 | INFO     | did not find any defunct processes belonging to 10904
[2025-11-24 14:43:47] 2025-11-24 13:43:13,279 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 14:43:47] 2025-11-24 13:43:13,280 | INFO     | ready for new job
[2025-11-24 14:43:47] 2025-11-24 13:43:13,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 14:43:47] 2025-11-24 13:43:13,285 | INFO     | ***************************************
[2025-11-24 14:43:47] 2025-11-24 13:43:13,285 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 14:43:47] 2025-11-24 13:43:13,285 | INFO     | ***************************************
[2025-11-24 14:43:47] 2025-11-24 13:43:13,285 | INFO     | 
[2025-11-24 14:43:47] 2025-11-24 13:43:13,286 | INFO     | pilot is running in a VM
[2025-11-24 14:43:47] 2025-11-24 13:43:13,286 | INFO     | architecture information:
[2025-11-24 14:43:47] 2025-11-24 13:43:13,292 | INFO     | executing command: cat /etc/os-release
[2025-11-24 14:43:47] 2025-11-24 13:43:13,532 | INFO     | cat /etc/os-release:
[2025-11-24 14:43:47] NAME="CentOS Linux"
[2025-11-24 14:43:47] VERSION="7 (Core)"
[2025-11-24 14:43:47] ID="centos"
[2025-11-24 14:43:47] ID_LIKE="rhel fedora"
[2025-11-24 14:43:47] VERSION_ID="7"
[2025-11-24 14:43:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 14:43:47] ANSI_COLOR="0;31"
[2025-11-24 14:43:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 14:43:47] HOME_URL="https://www.centos.org/"
[2025-11-24 14:43:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 14:43:47] 
[2025-11-24 14:43:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 14:43:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 14:43:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 14:43:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 14:43:47] 
[2025-11-24 14:43:47] 2025-11-24 13:43:13,532 | INFO     | ***************************************
[2025-11-24 14:43:47] 2025-11-24 13:43:14,035 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-24 14:43:47] 2025-11-24 13:43:14,340 | INFO     | sufficient remaining disk space (494458109952 B)
[2025-11-24 14:43:47] 2025-11-24 13:43:14,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 14:43:47] 2025-11-24 13:43:14,340 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 14:43:47] 2025-11-24 13:43:14,340 | INFO     | update_server=False
[2025-11-24 14:43:47] 2025-11-24 13:43:14,341 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 14:43:47] 2025-11-24 13:43:14,342 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 14:43:47] 2025-11-24 13:43:14,579 | INFO     | all data control threads have been joined
[2025-11-24 14:43:47] 2025-11-24 13:43:14,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:43:47] 2025-11-24 13:43:14,776 | INFO     | aborting loop
[2025-11-24 14:43:47] 2025-11-24 13:43:15,149 | INFO     | all job control threads have been joined
[2025-11-24 14:43:47] 2025-11-24 13:43:15,221 | INFO     | all payload control threads have been joined
[2025-11-24 14:43:47] 2025-11-24 13:43:15,346 | INFO     | [job] retrieve thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:15,453 | INFO     | [data] copytool_in thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:15,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:43:47] 2025-11-24 13:43:15,585 | INFO     | [data] control thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:15,668 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:15,782 | INFO     | [job] job monitor thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:15,921 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:16,155 | INFO     | [job] control thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:16,227 | INFO     | [payload] control thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:16,349 | INFO     | [data] copytool_out thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:16,440 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:16,485 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:16,498 | INFO     | [job] queue monitor thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:16,697 | INFO     | [job] validate thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:16,773 | INFO     | [payload] validate_post thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:16,885 | INFO     | [payload] failed_post thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:16,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 14:43:47] 2025-11-24 13:43:20,912 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 14:43:47] 2025-11-24 13:43:24,735 | INFO     | [monitor] cgroup control has ended
[2025-11-24 14:43:47] 2025-11-24 13:43:26,195 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140647699629888)>', '<ExcThread(monitor, started 140646882993920)>']
[2025-11-24 14:43:47] 2025-11-24 13:43:31,221 | INFO     | all workflow threads have been joined
[2025-11-24 14:43:47] 2025-11-24 13:43:31,221 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 14:43:47] 2025-11-24 13:43:31,222 | INFO     | traces error code: 0
[2025-11-24 14:43:47] 2025-11-24 13:43:31,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 14:43:47] 2025-11-24 13:43:43,465 | INFO     | PID=4152 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 14:43:47] 2025-11-24 13:43:43,465 | INFO     | .. there are 2 such processes running
[2025-11-24 14:43:47] 2025-11-24 13:43:43,465 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 14:43:47] 2025-11-24 13:43:43,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 14:43:47] 2025-11-24 13:43:43,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 14:43:47] 2025-11-24 13:43:43,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 14:43:47] 2025-11-24 13:43:43,466 | INFO     | [monitor] control thread has ended
[2025-11-24 14:43:47] 2025-11-24 13:43:43,876 [wrapper] ==== pilot stdout END ====
[2025-11-24 14:43:47] 2025-11-24 13:43:43,965 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 14:43:47] 2025-11-24 13:43:44,091 [wrapper] pilotpid: 4152
[2025-11-24 14:43:47] 2025-11-24 13:43:44,197 [wrapper] Pilot exit status: 0
[2025-11-24 14:43:47] 2025-11-24 13:43:44,318 [wrapper] pandaids: 6893852140
[2025-11-24 14:43:47] 2025-11-24 13:43:44,347 [wrapper] cleanup supervisor_pilot  4861 4153
[2025-11-24 14:43:47] 2025-11-24 13:43:44,397 [wrapper] Test setup, not cleaning
[2025-11-24 14:43:47] 2025-11-24 13:43:44,497 [wrapper] apfmon messages muted
[2025-11-24 14:43:47] 2025-11-24 13:43:44,609 [wrapper] ==== wrapper stdout END ====
[2025-11-24 14:43:47] 2025-11-24 13:43:44,746 [wrapper] ==== wrapper stderr END ====
[2025-11-24 14:43:47]  *** Error codes and diagnostics ***
[2025-11-24 14:43:47]     "exeErrorCode": 0,
[2025-11-24 14:43:47]     "exeErrorDiag": "",
[2025-11-24 14:43:47]     "pilotErrorCode": 0,
[2025-11-24 14:43:47]     "pilotErrorDiag": "",
[2025-11-24 14:43:47]  *** Listing of results directory ***
[2025-11-24 14:43:47] total 1323168
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc    576529 Nov 20 12:09 pilot3.tar.gz
[2025-11-24 14:43:47] -rwx------. 1 boinc boinc     36292 Nov 20 12:48 runpilot2-wrapper.sh
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc      5112 Nov 20 12:48 queuedata.json
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc       100 Nov 23 17:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 14:43:47] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 17:48 run_atlas
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc       105 Nov 23 17:48 job.xml
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc      6393 Nov 23 17:48 init_data.xml
[2025-11-24 14:43:47] -rw-r--r--. 2 boinc boinc 408009751 Nov 23 17:48 EVNT.47493127._000365.pool.root.1
[2025-11-24 14:43:47] -rw-r--r--. 2 boinc boinc     15847 Nov 23 17:48 start_atlas.sh
[2025-11-24 14:43:47] drwxrwx--x. 2 boinc boinc        68 Nov 23 17:48 shared
[2025-11-24 14:43:47] -rw-r--r--. 2 boinc boinc    590101 Nov 23 17:48 input.tar.gz
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc         0 Nov 23 17:48 boinc_lockfile
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc      2785 Nov 23 17:48 pandaJob.out
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc    989785 Nov 23 17:51 agis_schedconf.cvmfs.json
[2025-11-24 14:43:47] drwx------. 5 boinc boinc      4096 Nov 23 17:51 pilot3
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc       533 Nov 24 14:09 boinc_task_state.xml
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc 918339933 Nov 24 14:40 HITS.47523449._003647.pool.root.1
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc      1032 Nov 24 14:41 memory_monitor_summary.json
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc   1516227 Nov 24 14:41 agis_ddmendpoints.agis.ALL.json
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc   2349391 Nov 24 14:41 log.47523449._003647.job.log.tgz.1
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc        95 Nov 24 14:43 pilot_heartbeat.json
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc      7962 Nov 24 14:43 heartbeat.json
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc      8192 Nov 24 14:43 boinc_mmap_file
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc        29 Nov 24 14:43 wrapper_checkpoint.txt
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc       819 Nov 24 14:43 pilotlog.txt
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc   9986906 Nov 24 14:43 log.47523449._003647.job.log.1
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc       353 Nov 24 14:43 output.list
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc       620 Nov 24 14:43 runtime_log
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc  12359680 Nov 24 14:43 result.tar.gz
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc       661 Nov 24 14:43 vDZLDmRKIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSZGKDmxmrITn.diag
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc      8833 Nov 24 14:43 runtime_log.err
[2025-11-24 14:43:47] -rw-r--r--. 1 boinc boinc     21446 Nov 24 14:43 stderr.txt
[2025-11-24 14:43:47] HITS file was successfully produced:
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc 918339933 Nov 24 14:40 shared/HITS.pool.root.1
[2025-11-24 14:43:47]  *** Contents of shared directory: ***
[2025-11-24 14:43:47] total 1307936
[2025-11-24 14:43:47] -rw-r--r--. 2 boinc boinc 408009751 Nov 23 17:48 ATLAS.root_0
[2025-11-24 14:43:47] -rw-r--r--. 2 boinc boinc     15847 Nov 23 17:48 start_atlas.sh
[2025-11-24 14:43:47] -rw-r--r--. 2 boinc boinc    590101 Nov 23 17:48 input.tar.gz
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc 918339933 Nov 24 14:40 HITS.pool.root.1
[2025-11-24 14:43:47] -rw-------. 1 boinc boinc  12359680 Nov 24 14:43 result.tar.gz
14:43:49 (32562): run_atlas exited; CPU time 304081.796820
14:43:49 (32562): called boinc_finish(0)

</stderr_txt>
]]>

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