Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
01:53:43 (28848): wrapper (7.7.26015): starting
01:53:43 (28848): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 01:53:43] Arguments: --nthreads 4
[2025-11-22 01:53:43] Threads: 4
[2025-11-22 01:53:43] Checking for CVMFS
[2025-11-22 01:53:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 01:53:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 01:53:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 01:53:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 01:53:43] 2.13.3.0 4968 0 25316 153154 3 10 3571869 4096000 664 130560 0 64923 99.986 2716 3885 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-11-22 01:53:43] CVMFS is ok
[2025-11-22 01:53:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 01:53:43] Checking for apptainer binary...
[2025-11-22 01:53:43] apptainer is not installed, using version from CVMFS
[2025-11-22 01:53:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 01:53:43] senture-z10pe-l
[2025-11-22 01:53:43] apptainer works
[2025-11-22 01:53:43] Set ATHENA_PROC_NUMBER=4
[2025-11-22 01:53:43] Set ATHENA_CORE_NUMBER=4
[2025-11-22 01:53:43] Starting ATLAS job with PandaID=6893855193
[2025-11-22 01:53:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 06:58:55]  *** The last 200 lines of the pilot log: ***
[2025-11-23 06:58:55] 2025-11-23 06:57:53,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 06:58:55] 2025-11-23 06:57:54,547 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 06:58:55] 2025-11-23 06:57:54,550 | INFO     | found 36 cores (18 cores per socket, 2 sockets) HT, CPU MHz: 2294.962
[2025-11-23 06:58:55] 2025-11-23 06:57:54,558 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-6893855193/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 06:58:55] 2025-11-23 06:57:54,559 | INFO     | extracted standard info from prmon json
[2025-11-23 06:58:55] 2025-11-23 06:57:54,559 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 06:58:55] 2025-11-23 06:57:54,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 06:58:55] 2025-11-23 06:57:54,578 | INFO     | fitting pss+swap vs Time
[2025-11-23 06:58:55] 2025-11-23 06:57:54,579 | INFO     | sum of square deviations: 1564121408534.9531
[2025-11-23 06:58:55] 2025-11-23 06:57:54,632 | INFO     | sum of deviations: 2888137718086.7026
[2025-11-23 06:58:55] 2025-11-23 06:57:54,632 | INFO     | mean x: 1763828743.0052478
[2025-11-23 06:58:55] 2025-11-23 06:57:54,632 | INFO     | mean y: 2252054.811078717
[2025-11-23 06:58:55] 2025-11-23 06:57:54,632 | INFO     | intersect: -3254643665.125661
[2025-11-23 06:58:55] 2025-11-23 06:57:54,633 | INFO     | chi2: 5.064967393860959
[2025-11-23 06:58:55] 2025-11-23 06:57:54,635 | INFO     | sum of square deviations: 1550480885757.452
[2025-11-23 06:58:55] 2025-11-23 06:57:54,687 | INFO     | sum of deviations: 3274371759810.7246
[2025-11-23 06:58:55] 2025-11-23 06:57:54,688 | INFO     | mean x: 1763828590.505263
[2025-11-23 06:58:55] 2025-11-23 06:57:54,688 | INFO     | mean y: 2256372.0304093566
[2025-11-23 06:58:55] 2025-11-23 06:57:54,688 | INFO     | intersect: -3722672183.3291974
[2025-11-23 06:58:55] 2025-11-23 06:57:54,689 | INFO     | chi2: 2.5060794705115716
[2025-11-23 06:58:55] 2025-11-23 06:57:54,689 | INFO     | current chi2=2.5060794705115716 (change=50.52131088644147 %)
[2025-11-23 06:58:55] 2025-11-23 06:57:54,691 | INFO     | sum of square deviations: 1536919899354.9521
[2025-11-23 06:58:55] 2025-11-23 06:57:54,742 | INFO     | sum of deviations: 3285199209860.944
[2025-11-23 06:58:55] 2025-11-23 06:57:54,742 | INFO     | mean x: 1763828438.0052786
[2025-11-23 06:58:55] 2025-11-23 06:57:54,743 | INFO     | mean y: 2256493.0058651026
[2025-11-23 06:58:55] 2025-11-23 06:57:54,743 | INFO     | intersect: -3767964579.2160363
[2025-11-23 06:58:55] 2025-11-23 06:57:54,744 | INFO     | chi2: 2.439780083502969
[2025-11-23 06:58:55] 2025-11-23 06:57:54,744 | INFO     | current chi2=2.439780083502969 (change=2.6455420823134945 %)
[2025-11-23 06:58:55] 2025-11-23 06:57:54,744 | INFO     | right removable region: 1704
[2025-11-23 06:58:55] 2025-11-23 06:57:54,746 | INFO     | sum of square deviations: 1550480880267.452
[2025-11-23 06:58:55] 2025-11-23 06:57:54,798 | INFO     | sum of deviations: 2538991087258.807
[2025-11-23 06:58:55] 2025-11-23 06:57:54,798 | INFO     | mean x: 1763828895.505263
[2025-11-23 06:58:55] 2025-11-23 06:57:54,798 | INFO     | mean y: 2255955.243274854
[2025-11-23 06:58:55] 2025-11-23 06:57:54,798 | INFO     | intersect: -2886103328.726039
[2025-11-23 06:58:55] 2025-11-23 06:57:54,800 | INFO     | chi2: 2.988460446072725
[2025-11-23 06:58:55] 2025-11-23 06:57:54,800 | INFO     | current chi2=2.988460446072725 (change=40.99743959467703 %)
[2025-11-23 06:58:55] 2025-11-23 06:57:54,801 | INFO     | sum of square deviations: 1536919888374.952
[2025-11-23 06:58:55] 2025-11-23 06:57:54,806 | INFO     | time since job start (104639s) is within the limit (172800.0s)
[2025-11-23 06:58:55] 2025-11-23 06:57:54,852 | INFO     | sum of deviations: 2455282186789.5977
[2025-11-23 06:58:55] 2025-11-23 06:57:54,853 | INFO     | mean x: 1763829048.0052786
[2025-11-23 06:58:55] 2025-11-23 06:57:54,853 | INFO     | mean y: 2256896.48914956
[2025-11-23 06:58:55] 2025-11-23 06:57:54,853 | INFO     | intersect: -2815520448.2288227
[2025-11-23 06:58:55] 2025-11-23 06:57:54,854 | INFO     | chi2: 2.9318711813757967
[2025-11-23 06:58:55] 2025-11-23 06:57:54,854 | INFO     | current chi2=2.9318711813757967 (change=1.893592561055802 %)
[2025-11-23 06:58:55] 2025-11-23 06:57:54,854 | INFO     | left removable region: 20
[2025-11-23 06:58:55] 2025-11-23 06:57:54,856 | INFO     | sum of square deviations: 1480827023248.955
[2025-11-23 06:58:55] 2025-11-23 06:57:54,903 | INFO     | sum of deviations: 2723948318134.292
[2025-11-23 06:58:55] 2025-11-23 06:57:54,903 | INFO     | mean x: 1763829017.5053444
[2025-11-23 06:58:55] 2025-11-23 06:57:54,904 | INFO     | mean y: 2262790.245249406
[2025-11-23 06:58:55] 2025-11-23 06:57:54,904 | INFO     | intersect: -3242261391.3629646
[2025-11-23 06:58:55] 2025-11-23 06:57:54,905 | INFO     | chi2: 0.25226149192542696
[2025-11-23 06:58:55] 2025-11-23 06:57:54,905 | INFO     | current memory leak: 1.84 B/s (using 1684 data points, chi2=0.25)
[2025-11-23 06:58:55] 2025-11-23 06:57:54,906 | INFO     | could have reported an average CPU frequency of 2294 MHz (61 samples)
[2025-11-23 06:58:55] 2025-11-23 06:57:54,906 | INFO     | ..............................
[2025-11-23 06:58:55] 2025-11-23 06:57:54,906 | INFO     | . Timing measurements:
[2025-11-23 06:58:55] 2025-11-23 06:57:54,906 | INFO     | . get job = 0 s
[2025-11-23 06:58:55] 2025-11-23 06:57:54,906 | INFO     | . initial setup = 1 s
[2025-11-23 06:58:55] 2025-11-23 06:57:54,906 | INFO     | . payload setup = 8 s
[2025-11-23 06:58:55] 2025-11-23 06:57:54,906 | INFO     | . stage-in = 0 s
[2025-11-23 06:58:55] 2025-11-23 06:57:54,906 | INFO     | . payload execution = 104599 s
[2025-11-23 06:58:55] 2025-11-23 06:57:54,906 | INFO     | . stage-out = 1 s
[2025-11-23 06:58:55] 2025-11-23 06:57:54,907 | INFO     | . log creation = 0 s
[2025-11-23 06:58:55] 2025-11-23 06:57:54,907 | INFO     | ..............................
[2025-11-23 06:58:55] 2025-11-23 06:57:54,963 | INFO     | 
[2025-11-23 06:58:55] 2025-11-23 06:57:54,963 | INFO     | job summary report
[2025-11-23 06:58:55] 2025-11-23 06:57:54,964 | INFO     | --------------------------------------------------
[2025-11-23 06:58:55] 2025-11-23 06:57:54,964 | INFO     | PanDA job id: 6893855193
[2025-11-23 06:58:55] 2025-11-23 06:57:54,964 | INFO     | task id: 47523449
[2025-11-23 06:58:55] 2025-11-23 06:57:54,964 | INFO     | errors: (none)
[2025-11-23 06:58:55] 2025-11-23 06:57:54,964 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 06:58:55] 2025-11-23 06:57:54,964 | INFO     | pilot state: finished 
[2025-11-23 06:58:55] 2025-11-23 06:57:54,964 | INFO     | transexitcode: 0
[2025-11-23 06:58:55] 2025-11-23 06:57:54,964 | INFO     | exeerrorcode: 0
[2025-11-23 06:58:55] 2025-11-23 06:57:54,964 | INFO     | exeerrordiag: 
[2025-11-23 06:58:55] 2025-11-23 06:57:54,965 | INFO     | exitcode: 0
[2025-11-23 06:58:55] 2025-11-23 06:57:54,965 | INFO     | exitmsg: OK
[2025-11-23 06:58:55] 2025-11-23 06:57:54,965 | INFO     | cpuconsumptiontime: 402970 s
[2025-11-23 06:58:55] 2025-11-23 06:57:54,965 | INFO     | nevents: 1000
[2025-11-23 06:58:55] 2025-11-23 06:57:54,965 | INFO     | neventsw: 0
[2025-11-23 06:58:55] 2025-11-23 06:57:54,965 | INFO     | pid: 231139
[2025-11-23 06:58:55] 2025-11-23 06:57:54,965 | INFO     | pgrp: 231139
[2025-11-23 06:58:55] 2025-11-23 06:57:54,965 | INFO     | corecount: 4
[2025-11-23 06:58:55] 2025-11-23 06:57:54,965 | INFO     | event service: False
[2025-11-23 06:58:55] 2025-11-23 06:57:54,965 | INFO     | sizes: {0: 2298815, 5: 2299077, 11: 2299133, 104612: 2375576, 104614: 2384586, 104616: 2384642, 104624: 2385016}
[2025-11-23 06:58:55] 2025-11-23 06:57:54,965 | INFO     | --------------------------------------------------
[2025-11-23 06:58:55] 2025-11-23 06:57:54,965 | INFO     | 
[2025-11-23 06:58:55] 2025-11-23 06:57:54,966 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/13
[2025-11-23 06:58:55] 2025-11-23 06:57:54,987 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,988 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,988 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,988 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,988 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,988 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,988 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,988 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,988 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,989 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 06:58:55] 2025-11-23 06:57:54,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,989 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 06:58:55] 2025-11-23 06:57:54,989 | INFO     | job 6893855193 has completed (purged errors)
[2025-11-23 06:58:55] 2025-11-23 06:57:54,989 | INFO     | overall cleanup function is called
[2025-11-23 06:58:55] 2025-11-23 06:57:56,002 | INFO     | --- collectZombieJob: --- 10, [231139]
[2025-11-23 06:58:55] 2025-11-23 06:57:56,002 | INFO     | zombie collector waiting for pid 231139
[2025-11-23 06:58:55] 2025-11-23 06:57:56,002 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 06:58:55] 2025-11-23 06:57:56,003 | INFO     | collected zombie processes
[2025-11-23 06:58:55] 2025-11-23 06:57:56,003 | INFO     | will attempt to kill all subprocesses of pid=231139
[2025-11-23 06:58:55] 2025-11-23 06:57:56,258 | INFO     | process IDs to be killed: [231139] (in reverse order)
[2025-11-23 06:58:55] 2025-11-23 06:57:56,349 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 06:58:55] 2025-11-23 06:57:56,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 06:58:55] 2025-11-23 06:57:56,355 | INFO     | did not find any defunct processes belonging to 231139
[2025-11-23 06:58:55] 2025-11-23 06:57:56,360 | INFO     | did not find any defunct processes belonging to 231139
[2025-11-23 06:58:55] 2025-11-23 06:57:56,363 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 06:58:55] 2025-11-23 06:57:56,363 | INFO     | ready for new job
[2025-11-23 06:58:55] 2025-11-23 06:57:56,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 06:58:55] 2025-11-23 06:57:56,371 | INFO     | ***************************************
[2025-11-23 06:58:55] 2025-11-23 06:57:56,371 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 06:58:55] 2025-11-23 06:57:56,371 | INFO     | ***************************************
[2025-11-23 06:58:55] 2025-11-23 06:57:56,371 | INFO     | 
[2025-11-23 06:58:55] 2025-11-23 06:57:56,373 | INFO     | pilot is running in a VM
[2025-11-23 06:58:55] 2025-11-23 06:57:56,373 | INFO     | architecture information:
[2025-11-23 06:58:55] 2025-11-23 06:57:56,374 | INFO     | executing command: cat /etc/os-release
[2025-11-23 06:58:55] 2025-11-23 06:57:56,389 | INFO     | cat /etc/os-release:
[2025-11-23 06:58:55] NAME="CentOS Linux"
[2025-11-23 06:58:55] VERSION="7 (Core)"
[2025-11-23 06:58:55] ID="centos"
[2025-11-23 06:58:55] ID_LIKE="rhel fedora"
[2025-11-23 06:58:55] VERSION_ID="7"
[2025-11-23 06:58:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 06:58:55] ANSI_COLOR="0;31"
[2025-11-23 06:58:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 06:58:55] HOME_URL="https://www.centos.org/"
[2025-11-23 06:58:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 06:58:55] 
[2025-11-23 06:58:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 06:58:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 06:58:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 06:58:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 06:58:55] 
[2025-11-23 06:58:55] 2025-11-23 06:57:56,389 | INFO     | ***************************************
[2025-11-23 06:58:55] 2025-11-23 06:57:56,892 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/13
[2025-11-23 06:58:55] 2025-11-23 06:57:56,911 | INFO     | sufficient remaining disk space (103672709120 B)
[2025-11-23 06:58:55] 2025-11-23 06:57:56,912 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 06:58:55] 2025-11-23 06:57:56,912 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 06:58:55] 2025-11-23 06:57:56,912 | INFO     | update_server=False
[2025-11-23 06:58:55] 2025-11-23 06:57:56,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 06:58:55] 2025-11-23 06:57:56,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 06:58:55] 2025-11-23 06:57:56,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 06:58:55] 2025-11-23 06:57:57,271 | INFO     | all data control threads have been joined
[2025-11-23 06:58:55] 2025-11-23 06:57:57,388 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 06:58:55] 2025-11-23 06:57:57,388 | INFO     | aborting loop
[2025-11-23 06:58:55] 2025-11-23 06:57:57,419 | INFO     | all job control threads have been joined
[2025-11-23 06:58:55] 2025-11-23 06:57:57,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 06:58:55] 2025-11-23 06:57:57,918 | INFO     | [job] retrieve thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:57,919 | INFO     | [job] queue monitor thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:58,006 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:58,096 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:58,276 | INFO     | [data] control thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:58,340 | INFO     | all payload control threads have been joined
[2025-11-23 06:58:55] 2025-11-23 06:57:58,394 | INFO     | [job] job monitor thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:58,425 | INFO     | [job] control thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:58,436 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:58,441 | INFO     | [payload] validate_post thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:58,516 | INFO     | [payload] failed_post thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:58,865 | INFO     | [job] validate thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:58,919 | INFO     | [data] copytool_out thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:58,951 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:59,300 | INFO     | [data] copytool_in thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:57:59,345 | INFO     | [payload] control thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:58:01,676 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 06:58:55] 2025-11-23 06:58:28,126 | INFO     | PID=72248 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 06:58:55] 2025-11-23 06:58:28,126 | INFO     | .. there are 4 such processes running
[2025-11-23 06:58:55] 2025-11-23 06:58:28,126 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 06:58:55] 2025-11-23 06:58:28,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 06:58:55] 2025-11-23 06:58:28,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 06:58:55] 2025-11-23 06:58:49,397 | INFO     | [monitor] cgroup control has ended
[2025-11-23 06:58:55] 2025-11-23 06:58:50,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133414970189632)>', '<ExcThread(monitor, started 133414116103936)>']
[2025-11-23 06:58:55] 2025-11-23 06:58:51,247 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 06:58:55] 2025-11-23 06:58:51,247 | INFO     | [monitor] control thread has ended
[2025-11-23 06:58:55] 2025-11-23 06:58:55,578 | INFO     | all workflow threads have been joined
[2025-11-23 06:58:55] 2025-11-23 06:58:55,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 06:58:55] 2025-11-23 06:58:55,579 | INFO     | traces error code: 0
[2025-11-23 06:58:55] 2025-11-23 06:58:55,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 06:58:55] 2025-11-23 06:58:55,682 [wrapper] ==== pilot stdout END ====
[2025-11-23 06:58:55] 2025-11-23 06:58:55,687 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 06:58:55] 2025-11-23 06:58:55,691 [wrapper] pilotpid: 72248
[2025-11-23 06:58:55] 2025-11-23 06:58:55,696 [wrapper] Pilot exit status: 0
[2025-11-23 06:58:55] 2025-11-23 06:58:55,707 [wrapper] pandaids: 6893855193
[2025-11-23 06:58:55] 2025-11-23 06:58:55,771 [wrapper] cleanup supervisor_pilot 2827629 72254
[2025-11-23 06:58:55] 2025-11-23 06:58:55,776 [wrapper] Test setup, not cleaning
[2025-11-23 06:58:55] 2025-11-23 06:58:55,780 [wrapper] apfmon messages muted
[2025-11-23 06:58:55] 2025-11-23 06:58:55,784 [wrapper] ==== wrapper stdout END ====
[2025-11-23 06:58:55] 2025-11-23 06:58:55,788 [wrapper] ==== wrapper stderr END ====
[2025-11-23 06:58:55]  *** Error codes and diagnostics ***
[2025-11-23 06:58:55]     "exeErrorCode": 0,
[2025-11-23 06:58:55]     "exeErrorDiag": "",
[2025-11-23 06:58:55]     "pilotErrorCode": 0,
[2025-11-23 06:58:55]     "pilotErrorDiag": "",
[2025-11-23 06:58:55]  *** Listing of results directory ***
[2025-11-23 06:58:55] total 1341096
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc    576529 Nov 20 12:07 pilot3.tar.gz
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc      5112 Nov 20 12:29 queuedata.json
[2025-11-23 06:58:55] -rwx------ 1 boinc boinc     36292 Nov 20 12:30 runpilot2-wrapper.sh
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc       100 Nov 22 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 06:58:55] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 01:53 run_atlas
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc       105 Nov 22 01:53 job.xml
[2025-11-23 06:58:55] -rw-r--r-- 2 boinc boinc 410374117 Nov 22 01:53 EVNT.47493127._000438.pool.root.1
[2025-11-23 06:58:55] -rw-r--r-- 2 boinc boinc    590102 Nov 22 01:53 input.tar.gz
[2025-11-23 06:58:55] drwxrwx--x 2 boinc boinc      4096 Nov 22 01:53 shared
[2025-11-23 06:58:55] -rw-r--r-- 2 boinc boinc     15847 Nov 22 01:53 start_atlas.sh
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc         0 Nov 22 01:53 boinc_setup_complete
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc      6531 Nov 22 01:53 init_data.xml
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc         0 Nov 22 01:53 boinc_lockfile
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc      2786 Nov 22 01:53 pandaJob.out
[2025-11-23 06:58:55] -rw------- 1 boinc boinc        50 Nov 22 01:53 setup.sh.local
[2025-11-23 06:58:55] -rw------- 1 boinc boinc    989798 Nov 22 01:53 agis_schedconf.cvmfs.json
[2025-11-23 06:58:55] drwx------ 5 boinc boinc      4096 Nov 22 01:53 pilot3
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc       534 Nov 23 06:51 boinc_task_state.xml
[2025-11-23 06:58:55] -rw------- 1 boinc boinc 926116475 Nov 23 06:57 HITS.47523449._004376.pool.root.1
[2025-11-23 06:58:55] -rw------- 1 boinc boinc        95 Nov 23 06:57 pilot_heartbeat.json
[2025-11-23 06:58:55] -rw------- 1 boinc boinc      1054 Nov 23 06:57 memory_monitor_summary.json
[2025-11-23 06:58:55] -rw------- 1 boinc boinc   1526164 Nov 23 06:57 agis_ddmendpoints.agis.ALL.json
[2025-11-23 06:58:55] -rw------- 1 boinc boinc   2244126 Nov 23 06:57 log.47523449._004376.job.log.tgz.1
[2025-11-23 06:58:55] -rw------- 1 boinc boinc      8605 Nov 23 06:57 heartbeat.json
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc        30 Nov 23 06:58 wrapper_checkpoint.txt
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc      8192 Nov 23 06:58 boinc_mmap_file
[2025-11-23 06:58:55] -rw------- 1 boinc boinc      4892 Nov 23 06:58 pilotlog.txt
[2025-11-23 06:58:55] -rw------- 1 boinc boinc  14187827 Nov 23 06:58 log.47523449._004376.job.log.1
[2025-11-23 06:58:55] -rw------- 1 boinc boinc       353 Nov 23 06:58 output.list
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc       620 Nov 23 06:58 runtime_log
[2025-11-23 06:58:55] -rw------- 1 boinc boinc  16455680 Nov 23 06:58 result.tar.gz
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc      9444 Nov 23 06:58 runtime_log.err
[2025-11-23 06:58:55] -rw------- 1 boinc boinc       664 Nov 23 06:58 q2FLDmfyIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnnHKDmyZlCkn.diag
[2025-11-23 06:58:55] -rw-r--r-- 1 boinc boinc     20997 Nov 23 06:58 stderr.txt
[2025-11-23 06:58:55] HITS file was successfully produced:
[2025-11-23 06:58:55] -rw------- 1 boinc boinc 926116475 Nov 23 06:57 shared/HITS.pool.root.1
[2025-11-23 06:58:55]  *** Contents of shared directory: ***
[2025-11-23 06:58:55] total 1321844
[2025-11-23 06:58:55] -rw-r--r-- 2 boinc boinc 410374117 Nov 22 01:53 ATLAS.root_0
[2025-11-23 06:58:55] -rw-r--r-- 2 boinc boinc    590102 Nov 22 01:53 input.tar.gz
[2025-11-23 06:58:55] -rw-r--r-- 2 boinc boinc     15847 Nov 22 01:53 start_atlas.sh
[2025-11-23 06:58:55] -rw------- 1 boinc boinc 926116475 Nov 23 06:57 HITS.pool.root.1
[2025-11-23 06:58:55] -rw------- 1 boinc boinc  16455680 Nov 23 06:58 result.tar.gz
06:58:57 (28848): run_atlas exited; CPU time 409883.365191
06:58:57 (28848): called boinc_finish(0)

</stderr_txt>
]]>

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