Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
01:53:37 (16267): wrapper (7.7.26015): starting
01:53:37 (16267): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 01:53:37] Arguments: --nthreads 4
[2025-11-22 01:53:37] Threads: 4
[2025-11-22 01:53:37] Checking for CVMFS
[2025-11-22 01:53:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 01:53:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 01:53:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 01:53:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 01:53:38] 2.13.3.0 4968 0 25316 153154 3 9 3568572 4096001 349 130560 0 30072 99.977 2381 3506 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-11-22 01:53:38] CVMFS is ok
[2025-11-22 01:53:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 01:53:38] Checking for apptainer binary...
[2025-11-22 01:53:38] apptainer is not installed, using version from CVMFS
[2025-11-22 01:53:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 01:53:38] senture-z10pe-l
[2025-11-22 01:53:38] apptainer works
[2025-11-22 01:53:38] Set ATHENA_PROC_NUMBER=4
[2025-11-22 01:53:38] Set ATHENA_CORE_NUMBER=4
[2025-11-22 01:53:38] Starting ATLAS job with PandaID=6893841444
[2025-11-22 01:53:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 06:48:50]  *** The last 200 lines of the pilot log: ***
[2025-11-23 06:48:50] 2025-11-23 06:47:42,728 | INFO     | time since job start (104030s) is within the limit (172800.0s)
[2025-11-23 06:48:50] 2025-11-23 06:47:43,710 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 06:48:50] 2025-11-23 06:47:43,714 | INFO     | found 36 cores (18 cores per socket, 2 sockets) HT, CPU MHz: 2294.962
[2025-11-23 06:48:50] 2025-11-23 06:47:43,722 | INFO     | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-6893841444/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 06:48:50] 2025-11-23 06:47:43,722 | INFO     | extracted standard info from prmon json
[2025-11-23 06:48:50] 2025-11-23 06:47:43,722 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 06:48:50] 2025-11-23 06:47:43,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 06:48:50] 2025-11-23 06:47:43,741 | INFO     | fitting pss+swap vs Time
[2025-11-23 06:48:50] 2025-11-23 06:47:43,743 | INFO     | sum of square deviations: 1536920654563.715
[2025-11-23 06:48:50] 2025-11-23 06:47:43,791 | INFO     | sum of deviations: 2745414245872.185
[2025-11-23 06:48:50] 2025-11-23 06:47:43,791 | INFO     | mean x: 1763828437.0129032
[2025-11-23 06:48:50] 2025-11-23 06:47:43,791 | INFO     | mean y: 2247758.991788856
[2025-11-23 06:48:50] 2025-11-23 06:47:43,792 | INFO     | intersect: -3148493760.338183
[2025-11-23 06:48:50] 2025-11-23 06:47:43,793 | INFO     | chi2: 5.153195959663231
[2025-11-23 06:48:50] 2025-11-23 06:47:43,794 | INFO     | sum of square deviations: 1523438975938.7144
[2025-11-23 06:48:50] 2025-11-23 06:47:43,842 | INFO     | sum of deviations: 3133795200796.589
[2025-11-23 06:48:50] 2025-11-23 06:47:43,843 | INFO     | mean x: 1763828284.5129411
[2025-11-23 06:48:50] 2025-11-23 06:47:43,843 | INFO     | mean y: 2252151.2688235296
[2025-11-23 06:48:50] 2025-11-23 06:47:43,843 | INFO     | intersect: -3626036674.432257
[2025-11-23 06:48:50] 2025-11-23 06:47:43,844 | INFO     | chi2: 2.547978511767641
[2025-11-23 06:48:50] 2025-11-23 06:47:43,844 | INFO     | current chi2=2.547978511767641 (change=50.555373175947395 %)
[2025-11-23 06:48:50] 2025-11-23 06:47:43,846 | INFO     | sum of square deviations: 1510036368563.7148
[2025-11-23 06:48:50] 2025-11-23 06:47:43,893 | INFO     | sum of deviations: 3165151213748.115
[2025-11-23 06:48:50] 2025-11-23 06:47:43,893 | INFO     | mean x: 1763828132.0129793
[2025-11-23 06:48:50] 2025-11-23 06:47:43,893 | INFO     | mean y: 2252506.9946902655
[2025-11-23 06:48:50] 2025-11-23 06:47:43,893 | INFO     | intersect: -3694865568.5083966
[2025-11-23 06:48:50] 2025-11-23 06:47:43,894 | INFO     | chi2: 2.4504944244045794
[2025-11-23 06:48:50] 2025-11-23 06:47:43,894 | INFO     | current chi2=2.4504944244045794 (change=3.8259383630136075 %)
[2025-11-23 06:48:50] 2025-11-23 06:47:43,894 | INFO     | right removable region: 1694
[2025-11-23 06:48:50] 2025-11-23 06:47:43,896 | INFO     | sum of square deviations: 1523438962518.7144
[2025-11-23 06:48:50] 2025-11-23 06:47:43,944 | INFO     | sum of deviations: 2396005943595.9897
[2025-11-23 06:48:50] 2025-11-23 06:47:43,944 | INFO     | mean x: 1763828589.5129411
[2025-11-23 06:48:50] 2025-11-23 06:47:43,944 | INFO     | mean y: 2251708.3188235294
[2025-11-23 06:48:50] 2025-11-23 06:47:43,944 | INFO     | intersect: -2771829753.3830748
[2025-11-23 06:48:50] 2025-11-23 06:47:43,945 | INFO     | chi2: 3.0357118273902874
[2025-11-23 06:48:50] 2025-11-23 06:47:43,946 | INFO     | current chi2=3.0357118273902874 (change=41.09069689659782 %)
[2025-11-23 06:48:50] 2025-11-23 06:47:43,947 | INFO     | sum of square deviations: 1510036341723.7144
[2025-11-23 06:48:50] 2025-11-23 06:47:43,994 | INFO     | sum of deviations: 2315949905174.4824
[2025-11-23 06:48:50] 2025-11-23 06:47:43,995 | INFO     | mean x: 1763828742.0129793
[2025-11-23 06:48:50] 2025-11-23 06:47:43,995 | INFO     | mean y: 2252619.1144542773
[2025-11-23 06:48:50] 2025-11-23 06:47:43,995 | INFO     | intersect: -2702939895.0908704
[2025-11-23 06:48:50] 2025-11-23 06:47:43,996 | INFO     | chi2: 2.983130507734703
[2025-11-23 06:48:50] 2025-11-23 06:47:43,996 | INFO     | current chi2=2.983130507734703 (change=1.732091932480537 %)
[2025-11-23 06:48:50] 2025-11-23 06:47:43,996 | INFO     | left removable region: 20
[2025-11-23 06:48:50] 2025-11-23 06:47:43,998 | INFO     | sum of square deviations: 1454603573488.2107
[2025-11-23 06:48:50] 2025-11-23 06:47:44,044 | INFO     | sum of deviations: 2612472426719.154
[2025-11-23 06:48:50] 2025-11-23 06:47:44,044 | INFO     | mean x: 1763828711.513142
[2025-11-23 06:48:50] 2025-11-23 06:47:44,044 | INFO     | mean y: 2258783.288530466
[2025-11-23 06:48:50] 2025-11-23 06:47:44,044 | INFO     | intersect: -3165582928.548845
[2025-11-23 06:48:50] 2025-11-23 06:47:44,045 | INFO     | chi2: 0.2296157714294836
[2025-11-23 06:48:50] 2025-11-23 06:47:44,045 | INFO     | current memory leak: 1.80 B/s (using 1674 data points, chi2=0.23)
[2025-11-23 06:48:50] 2025-11-23 06:47:44,046 | INFO     | could have reported an average CPU frequency of 2294 MHz (61 samples)
[2025-11-23 06:48:50] 2025-11-23 06:47:44,046 | INFO     | ..............................
[2025-11-23 06:48:50] 2025-11-23 06:47:44,046 | INFO     | . Timing measurements:
[2025-11-23 06:48:50] 2025-11-23 06:47:44,047 | INFO     | . get job = 0 s
[2025-11-23 06:48:50] 2025-11-23 06:47:44,047 | INFO     | . initial setup = 2 s
[2025-11-23 06:48:50] 2025-11-23 06:47:44,047 | INFO     | . payload setup = 8 s
[2025-11-23 06:48:50] 2025-11-23 06:47:44,047 | INFO     | . stage-in = 0 s
[2025-11-23 06:48:50] 2025-11-23 06:47:44,047 | INFO     | . payload execution = 103990 s
[2025-11-23 06:48:50] 2025-11-23 06:47:44,047 | INFO     | . stage-out = 2 s
[2025-11-23 06:48:50] 2025-11-23 06:47:44,047 | INFO     | . log creation = 0 s
[2025-11-23 06:48:50] 2025-11-23 06:47:44,047 | INFO     | ..............................
[2025-11-23 06:48:50] 2025-11-23 06:47:44,101 | INFO     | 
[2025-11-23 06:48:50] 2025-11-23 06:47:44,102 | INFO     | job summary report
[2025-11-23 06:48:50] 2025-11-23 06:47:44,102 | INFO     | --------------------------------------------------
[2025-11-23 06:48:50] 2025-11-23 06:47:44,102 | INFO     | PanDA job id: 6893841444
[2025-11-23 06:48:50] 2025-11-23 06:47:44,102 | INFO     | task id: 47523449
[2025-11-23 06:48:50] 2025-11-23 06:47:44,102 | INFO     | errors: (none)
[2025-11-23 06:48:50] 2025-11-23 06:47:44,102 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 06:48:50] 2025-11-23 06:47:44,102 | INFO     | pilot state: finished 
[2025-11-23 06:48:50] 2025-11-23 06:47:44,103 | INFO     | transexitcode: 0
[2025-11-23 06:48:50] 2025-11-23 06:47:44,103 | INFO     | exeerrorcode: 0
[2025-11-23 06:48:50] 2025-11-23 06:47:44,103 | INFO     | exeerrordiag: 
[2025-11-23 06:48:50] 2025-11-23 06:47:44,103 | INFO     | exitcode: 0
[2025-11-23 06:48:50] 2025-11-23 06:47:44,103 | INFO     | exitmsg: OK
[2025-11-23 06:48:50] 2025-11-23 06:47:44,103 | INFO     | cpuconsumptiontime: 400549 s
[2025-11-23 06:48:50] 2025-11-23 06:47:44,103 | INFO     | nevents: 1000
[2025-11-23 06:48:50] 2025-11-23 06:47:44,103 | INFO     | neventsw: 0
[2025-11-23 06:48:50] 2025-11-23 06:47:44,104 | INFO     | pid: 193934
[2025-11-23 06:48:50] 2025-11-23 06:47:44,104 | INFO     | pgrp: 193934
[2025-11-23 06:48:50] 2025-11-23 06:47:44,104 | INFO     | corecount: 4
[2025-11-23 06:48:50] 2025-11-23 06:47:44,104 | INFO     | event service: False
[2025-11-23 06:48:50] 2025-11-23 06:47:44,104 | INFO     | sizes: {0: 2297979, 1: 2298842, 6: 2299104, 12: 2299132, 104002: 2375407, 104003: 2375406, 104005: 2384598, 104008: 2384654, 104016: 2384900}
[2025-11-23 06:48:50] 2025-11-23 06:47:44,104 | INFO     | --------------------------------------------------
[2025-11-23 06:48:50] 2025-11-23 06:47:44,104 | INFO     | 
[2025-11-23 06:48:50] 2025-11-23 06:47:44,105 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/9
[2025-11-23 06:48:50] 2025-11-23 06:47:44,129 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,129 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,129 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,129 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,129 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,130 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,130 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,130 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,130 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,130 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 06:48:50] 2025-11-23 06:47:44,131 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,131 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 06:48:50] 2025-11-23 06:47:44,131 | INFO     | job 6893841444 has completed (purged errors)
[2025-11-23 06:48:50] 2025-11-23 06:47:44,131 | INFO     | overall cleanup function is called
[2025-11-23 06:48:50] 2025-11-23 06:47:45,143 | INFO     | --- collectZombieJob: --- 10, [193934]
[2025-11-23 06:48:50] 2025-11-23 06:47:45,144 | INFO     | zombie collector waiting for pid 193934
[2025-11-23 06:48:50] 2025-11-23 06:47:45,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 06:48:50] 2025-11-23 06:47:45,144 | INFO     | collected zombie processes
[2025-11-23 06:48:50] 2025-11-23 06:47:45,144 | INFO     | will attempt to kill all subprocesses of pid=193934
[2025-11-23 06:48:50] 2025-11-23 06:47:45,416 | INFO     | process IDs to be killed: [193934] (in reverse order)
[2025-11-23 06:48:50] 2025-11-23 06:47:45,533 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 06:48:50] 2025-11-23 06:47:45,534 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 06:48:50] 2025-11-23 06:47:45,540 | INFO     | did not find any defunct processes belonging to 193934
[2025-11-23 06:48:50] 2025-11-23 06:47:45,545 | INFO     | did not find any defunct processes belonging to 193934
[2025-11-23 06:48:50] 2025-11-23 06:47:45,548 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 06:48:50] 2025-11-23 06:47:45,548 | INFO     | ready for new job
[2025-11-23 06:48:50] 2025-11-23 06:47:45,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 06:48:50] 2025-11-23 06:47:45,554 | INFO     | ***************************************
[2025-11-23 06:48:50] 2025-11-23 06:47:45,554 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 06:48:50] 2025-11-23 06:47:45,554 | INFO     | ***************************************
[2025-11-23 06:48:50] 2025-11-23 06:47:45,554 | INFO     | 
[2025-11-23 06:48:50] 2025-11-23 06:47:45,556 | INFO     | pilot is running in a VM
[2025-11-23 06:48:50] 2025-11-23 06:47:45,556 | INFO     | architecture information:
[2025-11-23 06:48:50] 2025-11-23 06:47:45,557 | INFO     | executing command: cat /etc/os-release
[2025-11-23 06:48:50] 2025-11-23 06:47:45,574 | INFO     | cat /etc/os-release:
[2025-11-23 06:48:50] NAME="CentOS Linux"
[2025-11-23 06:48:50] VERSION="7 (Core)"
[2025-11-23 06:48:50] ID="centos"
[2025-11-23 06:48:50] ID_LIKE="rhel fedora"
[2025-11-23 06:48:50] VERSION_ID="7"
[2025-11-23 06:48:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 06:48:50] ANSI_COLOR="0;31"
[2025-11-23 06:48:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 06:48:50] HOME_URL="https://www.centos.org/"
[2025-11-23 06:48:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 06:48:50] 
[2025-11-23 06:48:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 06:48:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 06:48:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 06:48:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 06:48:50] 
[2025-11-23 06:48:50] 2025-11-23 06:47:45,574 | INFO     | ***************************************
[2025-11-23 06:48:50] 2025-11-23 06:47:46,077 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/9
[2025-11-23 06:48:50] 2025-11-23 06:47:46,094 | INFO     | sufficient remaining disk space (94431608832 B)
[2025-11-23 06:48:50] 2025-11-23 06:47:46,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 06:48:50] 2025-11-23 06:47:46,095 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 06:48:50] 2025-11-23 06:47:46,095 | INFO     | update_server=False
[2025-11-23 06:48:50] 2025-11-23 06:47:46,095 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 06:48:50] 2025-11-23 06:47:46,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 06:48:50] 2025-11-23 06:47:46,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 06:48:50] 2025-11-23 06:47:46,097 | INFO     | aborting loop
[2025-11-23 06:48:50] 2025-11-23 06:47:46,097 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 06:48:50] 2025-11-23 06:47:46,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 06:48:50] 2025-11-23 06:47:46,488 | INFO     | all data control threads have been joined
[2025-11-23 06:48:50] 2025-11-23 06:47:46,732 | INFO     | all job control threads have been joined
[2025-11-23 06:48:50] 2025-11-23 06:47:47,099 | INFO     | [job] retrieve thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:47,101 | INFO     | [job] queue monitor thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:47,103 | INFO     | [job] job monitor thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:47,266 | INFO     | [payload] failed_post thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:47,494 | INFO     | [data] control thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:47,508 | INFO     | all payload control threads have been joined
[2025-11-23 06:48:50] 2025-11-23 06:47:47,734 | INFO     | [job] control thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:47,869 | INFO     | [payload] validate_post thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:47,977 | INFO     | [job] validate thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:47,985 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:48,058 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:48,102 | INFO     | [data] copytool_out thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:48,216 | INFO     | [data] copytool_in thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:48,237 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:48,513 | INFO     | [payload] control thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:50,482 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:47:56,625 | INFO     | job.realtimelogging is not enabled
[2025-11-23 06:48:50] 2025-11-23 06:47:57,631 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 06:48:50] 2025-11-23 06:48:16,192 | INFO     | PID=60774 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 06:48:50] 2025-11-23 06:48:16,193 | INFO     | .. there are 8 such processes running
[2025-11-23 06:48:50] 2025-11-23 06:48:16,193 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 06:48:50] 2025-11-23 06:48:16,193 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 06:48:50] 2025-11-23 06:48:16,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 06:48:50] 2025-11-23 06:48:45,288 | INFO     | [monitor] cgroup control has ended
[2025-11-23 06:48:50] 2025-11-23 06:48:45,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137399837288256)>', '<ExcThread(monitor, started 137398990124800)>']
[2025-11-23 06:48:50] 2025-11-23 06:48:46,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 06:48:50] 2025-11-23 06:48:46,341 | INFO     | [monitor] control thread has ended
[2025-11-23 06:48:50] 2025-11-23 06:48:50,611 | INFO     | all workflow threads have been joined
[2025-11-23 06:48:50] 2025-11-23 06:48:50,611 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 06:48:50] 2025-11-23 06:48:50,612 | INFO     | traces error code: 0
[2025-11-23 06:48:50] 2025-11-23 06:48:50,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 06:48:50] 2025-11-23 06:48:50,710 [wrapper] ==== pilot stdout END ====
[2025-11-23 06:48:50] 2025-11-23 06:48:50,715 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 06:48:50] 2025-11-23 06:48:50,719 [wrapper] pilotpid: 60774
[2025-11-23 06:48:50] 2025-11-23 06:48:50,725 [wrapper] Pilot exit status: 0
[2025-11-23 06:48:50] 2025-11-23 06:48:50,740 [wrapper] pandaids: 6893841444
[2025-11-23 06:48:50] 2025-11-23 06:48:50,820 [wrapper] cleanup supervisor_pilot 2779436 60778
[2025-11-23 06:48:50] 2025-11-23 06:48:50,824 [wrapper] Test setup, not cleaning
[2025-11-23 06:48:50] 2025-11-23 06:48:50,831 [wrapper] apfmon messages muted
[2025-11-23 06:48:50] 2025-11-23 06:48:50,836 [wrapper] ==== wrapper stdout END ====
[2025-11-23 06:48:50] 2025-11-23 06:48:50,840 [wrapper] ==== wrapper stderr END ====
[2025-11-23 06:48:50]  *** Error codes and diagnostics ***
[2025-11-23 06:48:50]     "exeErrorCode": 0,
[2025-11-23 06:48:50]     "exeErrorDiag": "",
[2025-11-23 06:48:50]     "pilotErrorCode": 0,
[2025-11-23 06:48:50]     "pilotErrorDiag": "",
[2025-11-23 06:48:50]  *** Listing of results directory ***
[2025-11-23 06:48:50] total 1337660
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc    576529 Nov 20 10:06 pilot3.tar.gz
[2025-11-23 06:48:50] -rwx------ 1 boinc boinc     36292 Nov 20 10:20 runpilot2-wrapper.sh
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc      5112 Nov 20 10:23 queuedata.json
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc       100 Nov 22 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 06:48:50] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 01:53 run_atlas
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc       105 Nov 22 01:53 job.xml
[2025-11-23 06:48:50] -rw-r--r-- 2 boinc boinc 408090252 Nov 22 01:53 EVNT.47493127._000178.pool.root.1
[2025-11-23 06:48:50] drwxrwx--x 2 boinc boinc      4096 Nov 22 01:53 shared
[2025-11-23 06:48:50] -rw-r--r-- 2 boinc boinc    590103 Nov 22 01:53 input.tar.gz
[2025-11-23 06:48:50] -rw-r--r-- 2 boinc boinc     15847 Nov 22 01:53 start_atlas.sh
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc         0 Nov 22 01:53 boinc_setup_complete
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc      6530 Nov 22 01:53 init_data.xml
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc         0 Nov 22 01:53 boinc_lockfile
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc      2786 Nov 22 01:53 pandaJob.out
[2025-11-23 06:48:50] -rw------- 1 boinc boinc        50 Nov 22 01:53 setup.sh.local
[2025-11-23 06:48:50] -rw------- 1 boinc boinc    989798 Nov 22 01:53 agis_schedconf.cvmfs.json
[2025-11-23 06:48:50] drwx------ 5 boinc boinc      4096 Nov 22 01:53 pilot3
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc       534 Nov 23 06:39 boinc_task_state.xml
[2025-11-23 06:48:50] -rw------- 1 boinc boinc 925104705 Nov 23 06:47 HITS.47523449._001774.pool.root.1
[2025-11-23 06:48:50] -rw------- 1 boinc boinc      1044 Nov 23 06:47 memory_monitor_summary.json
[2025-11-23 06:48:50] -rw------- 1 boinc boinc   1526164 Nov 23 06:47 agis_ddmendpoints.agis.ALL.json
[2025-11-23 06:48:50] -rw------- 1 boinc boinc   2235395 Nov 23 06:47 log.47523449._001774.job.log.tgz.1
[2025-11-23 06:48:50] -rw------- 1 boinc boinc      8615 Nov 23 06:47 heartbeat.json
[2025-11-23 06:48:50] -rw------- 1 boinc boinc        95 Nov 23 06:48 pilot_heartbeat.json
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc      8192 Nov 23 06:48 boinc_mmap_file
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc        30 Nov 23 06:48 wrapper_checkpoint.txt
[2025-11-23 06:48:50] -rw------- 1 boinc boinc      4962 Nov 23 06:48 pilotlog.txt
[2025-11-23 06:48:50] -rw------- 1 boinc boinc  14083555 Nov 23 06:48 log.47523449._001774.job.log.1
[2025-11-23 06:48:50] -rw------- 1 boinc boinc       353 Nov 23 06:48 output.list
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc       620 Nov 23 06:48 runtime_log
[2025-11-23 06:48:50] -rw------- 1 boinc boinc  16343040 Nov 23 06:48 result.tar.gz
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc      9426 Nov 23 06:48 runtime_log.err
[2025-11-23 06:48:50] -rw------- 1 boinc boinc       664 Nov 23 06:48 oE5LDmgxGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4NHKDmMiSh2m.diag
[2025-11-23 06:48:50] -rw-r--r-- 1 boinc boinc     20980 Nov 23 06:48 stderr.txt
[2025-11-23 06:48:50] HITS file was successfully produced:
[2025-11-23 06:48:50] -rw------- 1 boinc boinc 925104705 Nov 23 06:47 shared/HITS.pool.root.1
[2025-11-23 06:48:50]  *** Contents of shared directory: ***
[2025-11-23 06:48:50] total 1318516
[2025-11-23 06:48:50] -rw-r--r-- 2 boinc boinc 408090252 Nov 22 01:53 ATLAS.root_0
[2025-11-23 06:48:50] -rw-r--r-- 2 boinc boinc    590103 Nov 22 01:53 input.tar.gz
[2025-11-23 06:48:50] -rw-r--r-- 2 boinc boinc     15847 Nov 22 01:53 start_atlas.sh
[2025-11-23 06:48:50] -rw------- 1 boinc boinc 925104705 Nov 23 06:47 HITS.pool.root.1
[2025-11-23 06:48:50] -rw------- 1 boinc boinc  16343040 Nov 23 06:48 result.tar.gz
06:48:52 (16267): run_atlas exited; CPU time 407413.192225
06:48:52 (16267): called boinc_finish(0)

</stderr_txt>
]]>

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