Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
01:53:24 (5157): wrapper (7.7.26015): starting
01:53:24 (5157): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 01:53:24] Arguments: --nthreads 4
[2025-11-22 01:53:24] Threads: 4
[2025-11-22 01:53:24] Checking for CVMFS
[2025-11-22 01:53:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 01:53:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 01:53:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 01:53:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 01:53:24] 2.13.3.0 4968 0 24136 153154 3 1 3566320 4096001 0 130560 0 0 0.000 1292 2156 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-11-22 01:53:24] CVMFS is ok
[2025-11-22 01:53:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 01:53:24] Checking for apptainer binary...
[2025-11-22 01:53:24] apptainer is not installed, using version from CVMFS
[2025-11-22 01:53:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 01:53:25] senture-z10pe-l
[2025-11-22 01:53:25] apptainer works
[2025-11-22 01:53:25] Set ATHENA_PROC_NUMBER=4
[2025-11-22 01:53:25] Set ATHENA_CORE_NUMBER=4
[2025-11-22 01:53:25] Starting ATLAS job with PandaID=6893843636
[2025-11-22 01:53:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 06:57:51]  *** The last 200 lines of the pilot log: ***
[2025-11-23 06:57:51] 2025-11-23 06:57:16,396 | INFO     | extracted standard info from prmon json
[2025-11-23 06:57:51] 2025-11-23 06:57:16,396 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 06:57:51] 2025-11-23 06:57:16,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 06:57:51] 2025-11-23 06:57:16,415 | INFO     | fitting pss+swap vs Time
[2025-11-23 06:57:51] 2025-11-23 06:57:16,417 | INFO     | sum of square deviations: 1564121720864.7898
[2025-11-23 06:57:51] 2025-11-23 06:57:16,469 | INFO     | sum of deviations: 2774504037402.7324
[2025-11-23 06:57:51] 2025-11-23 06:57:16,469 | INFO     | mean x: 1763828742.0110788
[2025-11-23 06:57:51] 2025-11-23 06:57:16,469 | INFO     | mean y: 2249483.540524781
[2025-11-23 06:57:51] 2025-11-23 06:57:16,470 | INFO     | intersect: -3126503158.0959635
[2025-11-23 06:57:51] 2025-11-23 06:57:16,471 | INFO     | chi2: 5.541051962652755
[2025-11-23 06:57:51] 2025-11-23 06:57:16,473 | INFO     | sum of square deviations: 1550481201137.2886
[2025-11-23 06:57:51] 2025-11-23 06:57:16,523 | INFO     | sum of deviations: 3219477721865.7153
[2025-11-23 06:57:51] 2025-11-23 06:57:16,523 | INFO     | mean x: 1763828589.511111
[2025-11-23 06:57:51] 2025-11-23 06:57:16,523 | INFO     | mean y: 2254458.3573099417
[2025-11-23 06:57:51] 2025-11-23 06:57:16,523 | INFO     | intersect: -3660225838.053606
[2025-11-23 06:57:51] 2025-11-23 06:57:16,525 | INFO     | chi2: 2.4921894881082465
[2025-11-23 06:57:51] 2025-11-23 06:57:16,525 | INFO     | current chi2=2.4921894881082465 (change=55.02317060179451 %)
[2025-11-23 06:57:51] 2025-11-23 06:57:16,526 | INFO     | sum of square deviations: 1536920217784.7896
[2025-11-23 06:57:51] 2025-11-23 06:57:16,577 | INFO     | sum of deviations: 3228392090789.489
[2025-11-23 06:57:51] 2025-11-23 06:57:16,577 | INFO     | mean x: 1763828437.0111437
[2025-11-23 06:57:51] 2025-11-23 06:57:16,577 | INFO     | mean y: 2254557.9741935483
[2025-11-23 06:57:51] 2025-11-23 06:57:16,577 | INFO     | intersect: -3702771707.9719825
[2025-11-23 06:57:51] 2025-11-23 06:57:16,578 | INFO     | chi2: 2.4550964839140486
[2025-11-23 06:57:51] 2025-11-23 06:57:16,579 | INFO     | current chi2=2.4550964839140486 (change=1.4883701408416667 %)
[2025-11-23 06:57:51] 2025-11-23 06:57:16,579 | INFO     | right removable region: 1704
[2025-11-23 06:57:51] 2025-11-23 06:57:16,580 | INFO     | sum of square deviations: 1550481189547.2886
[2025-11-23 06:57:51] 2025-11-23 06:57:16,625 | INFO     | sum of deviations: 2422677400169.1533
[2025-11-23 06:57:51] 2025-11-23 06:57:16,625 | INFO     | mean x: 1763828894.511111
[2025-11-23 06:57:51] 2025-11-23 06:57:16,625 | INFO     | mean y: 2253413.912865497
[2025-11-23 06:57:51] 2025-11-23 06:57:16,625 | INFO     | intersect: -2753786729.8215456
[2025-11-23 06:57:51] 2025-11-23 06:57:16,626 | INFO     | chi2: 3.4249151413175514
[2025-11-23 06:57:51] 2025-11-23 06:57:16,626 | INFO     | current chi2=3.4249151413175514 (change=38.19016381001618 %)
[2025-11-23 06:57:51] 2025-11-23 06:57:16,627 | INFO     | sum of square deviations: 1536920194604.7896
[2025-11-23 06:57:51] 2025-11-23 06:57:16,665 | INFO     | monitor loop #6940: job 0:6893843636 is in state 'finished'
[2025-11-23 06:57:51] 2025-11-23 06:57:16,671 | INFO     | sum of deviations: 2342811880380.3535
[2025-11-23 06:57:51] 2025-11-23 06:57:16,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 06:57:51] 2025-11-23 06:57:16,672 | INFO     | mean x: 1763829047.0111437
[2025-11-23 06:57:51] 2025-11-23 06:57:16,672 | INFO     | mean y: 2254311.9284457476
[2025-11-23 06:57:51] 2025-11-23 06:57:16,672 | INFO     | intersect: -2686447196.974733
[2025-11-23 06:57:51] 2025-11-23 06:57:16,673 | INFO     | chi2: 3.374042010598477
[2025-11-23 06:57:51] 2025-11-23 06:57:16,673 | INFO     | current chi2=3.374042010598477 (change=1.4853836845576183 %)
[2025-11-23 06:57:51] 2025-11-23 06:57:16,673 | INFO     | left removable region: 20
[2025-11-23 06:57:51] 2025-11-23 06:57:16,675 | INFO     | sum of square deviations: 1480827330088.7854
[2025-11-23 06:57:51] 2025-11-23 06:57:16,717 | INFO     | sum of deviations: 2672367563064.9385
[2025-11-23 06:57:51] 2025-11-23 06:57:16,717 | INFO     | mean x: 1763829016.5112827
[2025-11-23 06:57:51] 2025-11-23 06:57:16,717 | INFO     | mean y: 2260788.6609263658
[2025-11-23 06:57:51] 2025-11-23 06:57:16,717 | INFO     | intersect: -3180824338.647517
[2025-11-23 06:57:51] 2025-11-23 06:57:16,718 | INFO     | chi2: 0.23573249743761793
[2025-11-23 06:57:51] 2025-11-23 06:57:16,719 | INFO     | current memory leak: 1.80 B/s (using 1684 data points, chi2=0.24)
[2025-11-23 06:57:51] 2025-11-23 06:57:16,720 | INFO     | could have reported an average CPU frequency of 2294 MHz (61 samples)
[2025-11-23 06:57:51] 2025-11-23 06:57:16,720 | INFO     | ..............................
[2025-11-23 06:57:51] 2025-11-23 06:57:16,720 | INFO     | . Timing measurements:
[2025-11-23 06:57:51] 2025-11-23 06:57:16,720 | INFO     | . get job = 0 s
[2025-11-23 06:57:51] 2025-11-23 06:57:16,720 | INFO     | . initial setup = 2 s
[2025-11-23 06:57:51] 2025-11-23 06:57:16,720 | INFO     | . payload setup = 8 s
[2025-11-23 06:57:51] 2025-11-23 06:57:16,720 | INFO     | . stage-in = 0 s
[2025-11-23 06:57:51] 2025-11-23 06:57:16,720 | INFO     | . payload execution = 104563 s
[2025-11-23 06:57:51] 2025-11-23 06:57:16,720 | INFO     | . stage-out = 2 s
[2025-11-23 06:57:51] 2025-11-23 06:57:16,720 | INFO     | . log creation = 0 s
[2025-11-23 06:57:51] 2025-11-23 06:57:16,720 | INFO     | ..............................
[2025-11-23 06:57:51] 2025-11-23 06:57:16,763 | INFO     | time since job start (104604s) is within the limit (172800.0s)
[2025-11-23 06:57:51] 2025-11-23 06:57:16,777 | INFO     | 
[2025-11-23 06:57:51] 2025-11-23 06:57:16,778 | INFO     | job summary report
[2025-11-23 06:57:51] 2025-11-23 06:57:16,778 | INFO     | --------------------------------------------------
[2025-11-23 06:57:51] 2025-11-23 06:57:16,778 | INFO     | PanDA job id: 6893843636
[2025-11-23 06:57:51] 2025-11-23 06:57:16,778 | INFO     | task id: 47523449
[2025-11-23 06:57:51] 2025-11-23 06:57:16,778 | INFO     | errors: (none)
[2025-11-23 06:57:51] 2025-11-23 06:57:16,778 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 06:57:51] 2025-11-23 06:57:16,779 | INFO     | pilot state: finished 
[2025-11-23 06:57:51] 2025-11-23 06:57:16,779 | INFO     | transexitcode: 0
[2025-11-23 06:57:51] 2025-11-23 06:57:16,779 | INFO     | exeerrorcode: 0
[2025-11-23 06:57:51] 2025-11-23 06:57:16,779 | INFO     | exeerrordiag: 
[2025-11-23 06:57:51] 2025-11-23 06:57:16,779 | INFO     | exitcode: 0
[2025-11-23 06:57:51] 2025-11-23 06:57:16,779 | INFO     | exitmsg: OK
[2025-11-23 06:57:51] 2025-11-23 06:57:16,779 | INFO     | cpuconsumptiontime: 403190 s
[2025-11-23 06:57:51] 2025-11-23 06:57:16,779 | INFO     | nevents: 1000
[2025-11-23 06:57:51] 2025-11-23 06:57:16,779 | INFO     | neventsw: 0
[2025-11-23 06:57:51] 2025-11-23 06:57:16,780 | INFO     | pid: 193792
[2025-11-23 06:57:51] 2025-11-23 06:57:16,780 | INFO     | pgrp: 193792
[2025-11-23 06:57:51] 2025-11-23 06:57:16,780 | INFO     | corecount: 4
[2025-11-23 06:57:51] 2025-11-23 06:57:16,780 | INFO     | event service: False
[2025-11-23 06:57:51] 2025-11-23 06:57:16,780 | INFO     | sizes: {0: 2297979, 1: 2298842, 6: 2299104, 12: 2299132, 104576: 2374370, 104578: 2383378, 104579: 2383562, 104589: 2383808}
[2025-11-23 06:57:51] 2025-11-23 06:57:16,780 | INFO     | --------------------------------------------------
[2025-11-23 06:57:51] 2025-11-23 06:57:16,780 | INFO     | 
[2025-11-23 06:57:51] 2025-11-23 06:57:16,780 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-11-23 06:57:51] 2025-11-23 06:57:16,813 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,813 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,814 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,814 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,815 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 06:57:51] 2025-11-23 06:57:16,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 06:57:51] 2025-11-23 06:57:16,816 | INFO     | job 6893843636 has completed (purged errors)
[2025-11-23 06:57:51] 2025-11-23 06:57:16,816 | INFO     | overall cleanup function is called
[2025-11-23 06:57:51] 2025-11-23 06:57:17,829 | INFO     | --- collectZombieJob: --- 10, [193792]
[2025-11-23 06:57:51] 2025-11-23 06:57:17,829 | INFO     | zombie collector waiting for pid 193792
[2025-11-23 06:57:51] 2025-11-23 06:57:17,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 06:57:51] 2025-11-23 06:57:17,830 | INFO     | collected zombie processes
[2025-11-23 06:57:51] 2025-11-23 06:57:17,830 | INFO     | will attempt to kill all subprocesses of pid=193792
[2025-11-23 06:57:51] 2025-11-23 06:57:18,074 | INFO     | process IDs to be killed: [193792] (in reverse order)
[2025-11-23 06:57:51] 2025-11-23 06:57:18,197 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 06:57:51] 2025-11-23 06:57:18,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 06:57:51] 2025-11-23 06:57:18,203 | INFO     | did not find any defunct processes belonging to 193792
[2025-11-23 06:57:51] 2025-11-23 06:57:18,207 | INFO     | did not find any defunct processes belonging to 193792
[2025-11-23 06:57:51] 2025-11-23 06:57:18,213 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 06:57:51] 2025-11-23 06:57:18,213 | INFO     | ready for new job
[2025-11-23 06:57:51] 2025-11-23 06:57:18,213 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 06:57:51] 2025-11-23 06:57:18,219 | INFO     | ***************************************
[2025-11-23 06:57:51] 2025-11-23 06:57:18,219 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 06:57:51] 2025-11-23 06:57:18,219 | INFO     | ***************************************
[2025-11-23 06:57:51] 2025-11-23 06:57:18,219 | INFO     | 
[2025-11-23 06:57:51] 2025-11-23 06:57:18,221 | INFO     | pilot is running in a VM
[2025-11-23 06:57:51] 2025-11-23 06:57:18,221 | INFO     | architecture information:
[2025-11-23 06:57:51] 2025-11-23 06:57:18,222 | INFO     | executing command: cat /etc/os-release
[2025-11-23 06:57:51] 2025-11-23 06:57:18,241 | INFO     | cat /etc/os-release:
[2025-11-23 06:57:51] NAME="CentOS Linux"
[2025-11-23 06:57:51] VERSION="7 (Core)"
[2025-11-23 06:57:51] ID="centos"
[2025-11-23 06:57:51] ID_LIKE="rhel fedora"
[2025-11-23 06:57:51] VERSION_ID="7"
[2025-11-23 06:57:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 06:57:51] ANSI_COLOR="0;31"
[2025-11-23 06:57:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 06:57:51] HOME_URL="https://www.centos.org/"
[2025-11-23 06:57:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 06:57:51] 
[2025-11-23 06:57:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 06:57:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 06:57:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 06:57:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 06:57:51] 
[2025-11-23 06:57:51] 2025-11-23 06:57:18,241 | INFO     | ***************************************
[2025-11-23 06:57:51] 2025-11-23 06:57:18,745 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-11-23 06:57:51] 2025-11-23 06:57:18,770 | INFO     | sufficient remaining disk space (101901664256 B)
[2025-11-23 06:57:51] 2025-11-23 06:57:18,770 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 06:57:51] 2025-11-23 06:57:18,771 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 06:57:51] 2025-11-23 06:57:18,771 | INFO     | update_server=False
[2025-11-23 06:57:51] 2025-11-23 06:57:18,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 06:57:51] 2025-11-23 06:57:18,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 06:57:51] 2025-11-23 06:57:18,772 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 06:57:51] 2025-11-23 06:57:18,772 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 06:57:51] 2025-11-23 06:57:18,772 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 06:57:51] 2025-11-23 06:57:18,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 06:57:51] 2025-11-23 06:57:18,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 06:57:51] 2025-11-23 06:57:19,052 | INFO     | all payload control threads have been joined
[2025-11-23 06:57:51] 2025-11-23 06:57:19,175 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 06:57:51] 2025-11-23 06:57:19,176 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 06:57:51] 2025-11-23 06:57:19,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 06:57:51] 2025-11-23 06:57:19,176 | INFO     | will abort loop
[2025-11-23 06:57:51] 2025-11-23 06:57:19,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 06:57:51] 2025-11-23 06:57:19,607 | INFO     | all data control threads have been joined
[2025-11-23 06:57:51] 2025-11-23 06:57:19,777 | INFO     | [job] retrieve thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:19,777 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:19,779 | INFO     | [job] queue monitor thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:19,881 | INFO     | [job] validate thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:19,881 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:20,058 | INFO     | [payload] control thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:20,182 | INFO     | [job] job monitor thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:20,390 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:20,454 | INFO     | all job control threads have been joined
[2025-11-23 06:57:51] 2025-11-23 06:57:20,499 | INFO     | [data] copytool_in thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:20,611 | INFO     | [data] control thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:20,856 | INFO     | [payload] validate_post thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:21,014 | INFO     | [payload] failed_post thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:21,202 | INFO     | [data] copytool_out thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:21,460 | INFO     | [job] control thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:22,778 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:29,784 | INFO     | job.realtimelogging is not enabled
[2025-11-23 06:57:51] 2025-11-23 06:57:30,788 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 06:57:51] 2025-11-23 06:57:46,032 | INFO     | [monitor] cgroup control has ended
[2025-11-23 06:57:51] 2025-11-23 06:57:46,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135369784952640)>', '<ExcThread(monitor, started 135368577906432)>']
[2025-11-23 06:57:51] 2025-11-23 06:57:46,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 06:57:51] 2025-11-23 06:57:46,919 | INFO     | [monitor] control thread has ended
[2025-11-23 06:57:51] 2025-11-23 06:57:51,595 | INFO     | all workflow threads have been joined
[2025-11-23 06:57:51] 2025-11-23 06:57:51,595 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 06:57:51] 2025-11-23 06:57:51,595 | INFO     | traces error code: 0
[2025-11-23 06:57:51] 2025-11-23 06:57:51,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 06:57:51] 2025-11-23 06:57:51,686 [wrapper] ==== pilot stdout END ====
[2025-11-23 06:57:51] 2025-11-23 06:57:51,691 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 06:57:51] 2025-11-23 06:57:51,694 [wrapper] pilotpid: 60791
[2025-11-23 06:57:51] 2025-11-23 06:57:51,698 [wrapper] Pilot exit status: 0
[2025-11-23 06:57:51] 2025-11-23 06:57:51,712 [wrapper] pandaids: 6893843636
[2025-11-23 06:57:51] 2025-11-23 06:57:51,759 [wrapper] cleanup supervisor_pilot 2827622 60793
[2025-11-23 06:57:51] 2025-11-23 06:57:51,763 [wrapper] Test setup, not cleaning
[2025-11-23 06:57:51] 2025-11-23 06:57:51,766 [wrapper] apfmon messages muted
[2025-11-23 06:57:51] 2025-11-23 06:57:51,770 [wrapper] ==== wrapper stdout END ====
[2025-11-23 06:57:51] 2025-11-23 06:57:51,774 [wrapper] ==== wrapper stderr END ====
[2025-11-23 06:57:51]  *** Error codes and diagnostics ***
[2025-11-23 06:57:51]     "exeErrorCode": 0,
[2025-11-23 06:57:51]     "exeErrorDiag": "",
[2025-11-23 06:57:51]     "pilotErrorCode": 0,
[2025-11-23 06:57:51]     "pilotErrorDiag": "",
[2025-11-23 06:57:51]  *** Listing of results directory ***
[2025-11-23 06:57:51] total 1341184
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc    576529 Nov 20 10:06 pilot3.tar.gz
[2025-11-23 06:57:51] -rwx------ 1 boinc boinc     36292 Nov 20 10:22 runpilot2-wrapper.sh
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc      5112 Nov 20 10:23 queuedata.json
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc       100 Nov 22 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 06:57:51] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 01:53 run_atlas
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc       105 Nov 22 01:53 job.xml
[2025-11-23 06:57:51] -rw-r--r-- 2 boinc boinc 412291882 Nov 22 01:53 EVNT.47493127._000205.pool.root.1
[2025-11-23 06:57:51] drwxrwx--x 2 boinc boinc      4096 Nov 22 01:53 shared
[2025-11-23 06:57:51] -rw-r--r-- 2 boinc boinc    590106 Nov 22 01:53 input.tar.gz
[2025-11-23 06:57:51] -rw-r--r-- 2 boinc boinc     15847 Nov 22 01:53 start_atlas.sh
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc         0 Nov 22 01:53 boinc_setup_complete
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc      6530 Nov 22 01:53 init_data.xml
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc         0 Nov 22 01:53 boinc_lockfile
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc      2786 Nov 22 01:53 pandaJob.out
[2025-11-23 06:57:51] -rw------- 1 boinc boinc        50 Nov 22 01:53 setup.sh.local
[2025-11-23 06:57:51] -rw------- 1 boinc boinc    989798 Nov 22 01:53 agis_schedconf.cvmfs.json
[2025-11-23 06:57:51] drwx------ 5 boinc boinc      4096 Nov 22 01:53 pilot3
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc       534 Nov 23 06:50 boinc_task_state.xml
[2025-11-23 06:57:51] -rw------- 1 boinc boinc 924267718 Nov 23 06:56 HITS.47523449._002048.pool.root.1
[2025-11-23 06:57:51] -rw------- 1 boinc boinc      1060 Nov 23 06:57 memory_monitor_summary.json
[2025-11-23 06:57:51] -rw------- 1 boinc boinc   1526164 Nov 23 06:57 agis_ddmendpoints.agis.ALL.json
[2025-11-23 06:57:51] -rw------- 1 boinc boinc   2243409 Nov 23 06:57 log.47523449._002048.job.log.tgz.1
[2025-11-23 06:57:51] -rw------- 1 boinc boinc        95 Nov 23 06:57 pilot_heartbeat.json
[2025-11-23 06:57:51] -rw------- 1 boinc boinc      7952 Nov 23 06:57 heartbeat.json
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc      8192 Nov 23 06:57 boinc_mmap_file
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc        30 Nov 23 06:57 wrapper_checkpoint.txt
[2025-11-23 06:57:51] -rw------- 1 boinc boinc      4880 Nov 23 06:57 pilotlog.txt
[2025-11-23 06:57:51] -rw------- 1 boinc boinc  14200281 Nov 23 06:57 log.47523449._002048.job.log.1
[2025-11-23 06:57:51] -rw------- 1 boinc boinc       353 Nov 23 06:57 output.list
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc       620 Nov 23 06:57 runtime_log
[2025-11-23 06:57:51] -rw------- 1 boinc boinc  16465920 Nov 23 06:57 result.tar.gz
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc      9426 Nov 23 06:57 runtime_log.err
[2025-11-23 06:57:51] -rw------- 1 boinc boinc       665 Nov 23 06:57 72dMDmqyGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpRGKDmyGdOHn.diag
[2025-11-23 06:57:51] -rw-r--r-- 1 boinc boinc     20881 Nov 23 06:57 stderr.txt
[2025-11-23 06:57:51] HITS file was successfully produced:
[2025-11-23 06:57:51] -rw------- 1 boinc boinc 924267718 Nov 23 06:56 shared/HITS.pool.root.1
[2025-11-23 06:57:51]  *** Contents of shared directory: ***
[2025-11-23 06:57:51] total 1321924
[2025-11-23 06:57:51] -rw-r--r-- 2 boinc boinc 412291882 Nov 22 01:53 ATLAS.root_0
[2025-11-23 06:57:51] -rw-r--r-- 2 boinc boinc    590106 Nov 22 01:53 input.tar.gz
[2025-11-23 06:57:51] -rw-r--r-- 2 boinc boinc     15847 Nov 22 01:53 start_atlas.sh
[2025-11-23 06:57:51] -rw------- 1 boinc boinc 924267718 Nov 23 06:56 HITS.pool.root.1
[2025-11-23 06:57:51] -rw------- 1 boinc boinc  16465920 Nov 23 06:57 result.tar.gz
06:57:53 (5157): run_atlas exited; CPU time 410033.929363
06:57:53 (5157): called boinc_finish(0)

</stderr_txt>
]]>

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