Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-24 15:28:33 (21924): vboxwrapper version 26210
2025-11-24 15:28:33 (21924): BOINC client version: 8.0.2
2025-11-24 15:28:33 (21924): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-11-24 15:28:33 (21924): Successfully copied 'init_data.xml' to the shared directory.
2025-11-24 15:28:34 (21924): Create VM. (boinc_92dcab86e00f016f, slot#0)
2025-11-24 15:28:34 (21924): Setting Memory Size for VM. (4800MB)
2025-11-24 15:28:34 (21924): Setting CPU Count for VM. (8)
2025-11-24 15:28:35 (21924): Setting Chipset Options for VM.
2025-11-24 15:28:35 (21924): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-24 15:28:35 (21924): Setting Boot Options for VM.
2025-11-24 15:28:36 (21924): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-24 15:28:36 (21924): Enabling VM Network Access.
2025-11-24 15:28:36 (21924): Disabling USB Support for VM.
2025-11-24 15:28:36 (21924): Disabling COM Port Support for VM.
2025-11-24 15:28:37 (21924): Disabling LPT Port Support for VM.
2025-11-24 15:28:37 (21924): Disabling Audio Support for VM.
2025-11-24 15:28:37 (21924): Disabling Clipboard Support for VM.
2025-11-24 15:28:37 (21924): Disabling Drag and Drop Support for VM.
2025-11-24 15:28:38 (21924): Adding storage controller(s) to VM.
2025-11-24 15:28:38 (21924): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-24 15:28:38 (21924): Adding VirtualBox Guest Additions to VM.
2025-11-24 15:28:39 (21924): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-24 15:28:39 (21924): forwarding host port 54390 to guest port 80
2025-11-24 15:28:39 (21924): Enabling remote desktop for VM.
2025-11-24 15:28:39 (21924): Required extension pack not installed, remote desktop not enabled.
2025-11-24 15:28:39 (21924): Enabling shared directory for VM.
2025-11-24 15:28:40 (21924): Starting VM using VBoxManage interface. (boinc_92dcab86e00f016f, slot#0)
2025-11-24 15:28:45 (21924): Successfully started VM. (PID = '25448')
2025-11-24 15:28:45 (21924): Reporting VM Process ID to BOINC.
2025-11-24 15:28:45 (21924): Guest Log: BIOS: VirtualBox 6.1.12
2025-11-24 15:28:45 (21924): Guest Log: CPUID EDX: 0x178bfbff
2025-11-24 15:28:45 (21924): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-24 15:28:45 (21924): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-24 15:28:45 (21924): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-24 15:28:45 (21924): Detected: Web Application Enabled (http://localhost:54390)
2025-11-24 15:28:45 (21924): Preference change detected
2025-11-24 15:28:45 (21924): Setting CPU throttle for VM. (100%)
2025-11-24 15:28:45 (21924): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-24 15:28:47 (21924): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-24 15:28:47 (21924): Guest Log: BIOS: Booting from Hard Disk...
2025-11-24 15:28:50 (21924): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-24 15:28:50 (21924): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-24 15:28:50 (21924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-24 15:28:55 (21924): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-24 15:28:55 (21924): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-24 15:29:00 (21924): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-24 15:29:00 (21924): Guest Log: 00:00:00.000088 main     Log opened 2025-11-24T15:28:58.976156000Z
2025-11-24 15:29:00 (21924): Guest Log: 00:00:00.000167 main     OS Product: Linux
2025-11-24 15:29:00 (21924): Guest Log: 00:00:00.000193 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-24 15:29:00 (21924): Guest Log: 00:00:00.000213 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-24 15:29:00 (21924): Guest Log: 00:00:00.000238 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-24 15:29:00 (21924): Guest Log: 00:00:00.000239 main     Process ID: 1368
2025-11-24 15:29:00 (21924): Guest Log: 00:00:00.000239 main     Package type: LINUX_64BITS_GENERIC
2025-11-24 15:29:00 (21924): Guest Log: 00:00:00.001595 main     5.2.32 r132073 started. Verbose level = 0
2025-11-24 15:29:00 (21924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-24 15:29:00 (21924): Guest Log: [INFO] Mounting shared directory
2025-11-24 15:29:01 (21924): Guest Log: [INFO] Checking for init_data.xml
2025-11-24 15:29:05 (21924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-24 15:29:05 (21924): Guest Log: [INFO] Detected branch: prod
2025-11-24 15:29:05 (21924): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-24 15:29:05 (21924): Guest Log: Copying input files
2025-11-24 15:29:09 (21924): Guest Log: Copied input files into RunAtlas.
2025-11-24 15:29:09 (21924): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-24 15:29:09 (21924): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-24 15:29:09 (21924): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-24 15:29:09 (21924): Guest Log: Further information can be found at the LHC@home message board.
2025-11-24 15:29:10 (21924): Guest Log: 00:00:10.004365 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 081 869 000ns (GuestNow=1 764 019 750 061 638 000 ns GuestLast=1 763 998 138 979 769 000 ns fSetTimeLastLoop=true )
2025-11-24 15:29:18 (21924): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-24 15:29:19 (21924): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-24 15:29:19 (21924): Guest Log: 2.6.3.0 1665 0 32188 153259 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-24 15:29:20 (21924): Guest Log: copied the webapp to /var/www
2025-11-24 15:29:20 (21924): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-24 15:29:20 (21924): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-24 15:29:20 (21924): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-24 15:29:20 (21924): Guest Log:  *** Starting ATLAS job. (PandaID=6893839986 taskID=47523449) ***
2025-11-24 17:09:06 (21924): Status Report: Elapsed Time: '6000.000000'
2025-11-24 17:09:06 (21924): Status Report: CPU Time: '20412.421875'
2025-11-24 18:49:30 (21924): Status Report: Elapsed Time: '12000.000000'
2025-11-24 18:49:30 (21924): Status Report: CPU Time: '43124.625000'
2025-11-24 20:30:21 (21924): Status Report: Elapsed Time: '18000.038788'
2025-11-24 20:30:21 (21924): Status Report: CPU Time: '65894.218750'
2025-11-24 22:10:46 (21924): Status Report: Elapsed Time: '24000.038788'
2025-11-24 22:10:46 (21924): Status Report: CPU Time: '88485.578125'
2025-11-24 23:51:15 (21924): Status Report: Elapsed Time: '30000.038788'
2025-11-24 23:51:15 (21924): Status Report: CPU Time: '111356.765625'
2025-11-25 01:15:21 (21924): Guest Log:  *** Job finished ***
2025-11-25 01:15:21 (21924): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:05,311 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:05,311 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:12,668 | INFO     | [monitor] cgroup control has ended
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:13,047 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140331953379136)>', '<ExcThread(monitor, started 140331102217984)>']
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:13,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:13,488 | INFO     | [monitor] control thread has ended
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,059 | INFO     | all workflow threads have been joined
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,059 | INFO     | end of generic workflow (traces error code: 0)
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,060 | INFO     | traces error code: 0
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,060 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,143 [wrapper] ==== pilot stdout END ====
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,147 [wrapper] ==== wrapper stdout RESUME ====
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,150 [wrapper] pilotpid: 6082
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,154 [wrapper] Pilot exit status: 0
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,167 [wrapper] pandaids: 6893839986
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,192 [wrapper] cleanup supervisor_pilot 14391 6083
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,198 [wrapper] Test setup, not cleaning
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,203 [wrapper] apfmon messages muted
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,207 [wrapper] ==== wrapper stdout END ====
2025-11-25 01:15:21 (21924): Guest Log: 2025-11-25 07:15:18,211 [wrapper] ==== wrapper stderr END ====
2025-11-25 01:15:21 (21924): Guest Log:  *** Error codes and diagnostics ***
2025-11-25 01:15:21 (21924): Guest Log:     "exeErrorCode": 0,
2025-11-25 01:15:21 (21924): Guest Log:     "exeErrorDiag": "",
2025-11-25 01:15:21 (21924): Guest Log:     "pilotErrorCode": 0,
2025-11-25 01:15:21 (21924): Guest Log:     "pilotErrorDiag": "",
2025-11-25 01:15:21 (21924): Guest Log:  *** Listing of results directory ***
2025-11-25 01:15:21 (21924): Guest Log: total 918296
2025-11-25 01:15:21 (21924): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 20 10:06 pilot3.tar.gz
2025-11-25 01:15:21 (21924): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 20 10:19 runpilot2-wrapper.sh
2025-11-25 01:15:21 (21924): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 20 10:20 queuedata.json
2025-11-25 01:15:21 (21924): Guest Log: -rwxr-xr-x. 1 atlas atlas      8949 Nov 24 21:29 init_data.xml
2025-11-25 01:15:21 (21924): Guest Log: -rwxr-xr-x. 1 atlas atlas    590104 Nov 24 21:29 input.tar.gz
2025-11-25 01:15:21 (21924): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 24 21:29 start_atlas.sh
2025-11-25 01:15:21 (21924): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 24 21:29 EVNT.47493127._000158.pool.root.1 -> /data/./ATLAS.root_0
2025-11-25 01:15:21 (21924): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 24 21:29 pandaJob.out
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas    991801 Nov 24 21:30 agis_schedconf.cvmfs.json
2025-11-25 01:15:21 (21924): Guest Log: drwx------. 5 atlas atlas      4096 Nov 24 21:30 pilot3
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas 923851050 Nov 25 07:13 HITS.47523449._001579.pool.root.1
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas      1044 Nov 25 07:14 memory_monitor_summary.json
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas   1516227 Nov 25 07:14 agis_ddmendpoints.agis.ALL.json
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas   1822182 Nov 25 07:14 log.47523449._001579.job.log.tgz.1
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas      8666 Nov 25 07:14 heartbeat.json
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas        95 Nov 25 07:15 pilot_heartbeat.json
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 25 07:15 pilotlog.txt
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas   4496207 Nov 25 07:15 log.47523449._001579.job.log.1
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas       353 Nov 25 07:15 output.list
2025-11-25 01:15:21 (21924): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 25 07:15 runtime_log
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas   6338560 Nov 25 07:15 result.tar.gz
2025-11-25 01:15:21 (21924): Guest Log: -rw-r--r--. 1 atlas atlas      8756 Nov 25 07:15 runtime_log.err
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas       666 Nov 25 07:15 osYKDmsvGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOLHKDmZpApJm.diag
2025-11-25 01:15:21 (21924): Guest Log: Looking for outputfile HITS.47523449._001579.pool.root.1
2025-11-25 01:15:21 (21924): Guest Log: HITS file was successfully produced
2025-11-25 01:15:21 (21924): Guest Log: -rw-------. 1 atlas atlas 923851050 Nov 25 07:13 /home/atlas/RunAtlas/HITS.47523449._001579.pool.root.1
2025-11-25 01:15:25 (21924): Guest Log: Successfully finished the ATLAS job!
2025-11-25 01:15:25 (21924): Guest Log: Copying the results back to the shared directory!
2025-11-25 01:15:25 (21924): Guest Log:  *** Contents of shared directory: ***
2025-11-25 01:15:25 (21924): Guest Log: total 1309688
2025-11-25 01:15:25 (21924): Guest Log: -rwxrwxrwx. 1 root root 410300427 Nov 24 21:28 ATLAS.root_0
2025-11-25 01:15:25 (21924): Guest Log: -rwxrwxrwx. 1 root root 923851050 Nov 25 07:15 HITS.pool.root.1
2025-11-25 01:15:25 (21924): Guest Log: -rwxrwxrwx. 1 root root      8949 Nov 24 21:28 init_data.xml
2025-11-25 01:15:25 (21924): Guest Log: -rwxrwxrwx. 1 root root    590104 Nov 20 14:28 input.tar.gz
2025-11-25 01:15:25 (21924): Guest Log: -rwxrwxrwx. 1 root root   6338560 Nov 25 07:15 result.tar.gz
2025-11-25 01:15:25 (21924): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 20 14:28 start_atlas.sh
2025-11-25 01:15:25 (21924): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-25 01:15:25 (21924): VM Completion File Detected.
2025-11-25 01:15:25 (21924): Powering off VM.
2025-11-25 01:15:26 (21924): Successfully stopped VM.
2025-11-25 01:15:26 (21924): Deregistering VM. (boinc_92dcab86e00f016f, slot#0)
2025-11-25 01:15:26 (21924): Removing network bandwidth throttle group from VM.
2025-11-25 01:15:27 (21924): Removing VM from VirtualBox.
2025-11-25 01:15:32 (21924): called boinc_finish(0)

</stderr_txt>
]]>

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