Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:49:06 (1766342): wrapper (7.7.26015): starting
07:49:06 (1766342): wrapper: running run_atlas (--nthreads 6)
[2025-11-21 07:49:06] Arguments: --nthreads 6
[2025-11-21 07:49:06] Threads: 6
[2025-11-21 07:49:06] Checking for CVMFS
[2025-11-21 07:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 07:49:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 07:49:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 07:49:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 07:49:07] 2.13.3.0 8752 9971 52076 153111 2 81 3458282 4097024 0 130560 0 2034100 99.766 707855 20842 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-21 07:49:07] CVMFS is ok
[2025-11-21 07:49:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 07:49:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 07:49:07] Further information can be found at the LHC@home message board.
[2025-11-21 07:49:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 07:49:07] Checking for apptainer binary...
[2025-11-21 07:49:07] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-21 07:49:07] apptainer is not installed, using version from CVMFS
[2025-11-21 07:49:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 07:49:07] pckeatlas08
[2025-11-21 07:49:07] apptainer works
[2025-11-21 07:49:07] Set ATHENA_PROC_NUMBER=6
[2025-11-21 07:49:07] Set ATHENA_CORE_NUMBER=6
[2025-11-21 07:49:07] Starting ATLAS job with PandaID=6893837999
[2025-11-21 07:49:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 13:00:08]  *** The last 200 lines of the pilot log: ***
[2025-11-21 13:00:08] 2025-11-21 11:59:35,591 | INFO     | time since job start (18624s) is within the limit (172800.0s)
[2025-11-21 13:00:08] 2025-11-21 11:59:35,782 | INFO     | monitor loop #1409: job 0:6893837999 is in state 'finished'
[2025-11-21 13:00:08] 2025-11-21 11:59:35,782 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 13:00:08] 2025-11-21 11:59:36,651 | INFO     | PID=1770030 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 13:00:08] 2025-11-21 11:59:37,456 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 13:00:08] 2025-11-21 11:59:37,457 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 4098.387333333333
[2025-11-21 13:00:08] 2025-11-21 11:59:37,457 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6893837999/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 13:00:08] 2025-11-21 11:59:37,458 | INFO     | extracted standard info from prmon json
[2025-11-21 13:00:08] 2025-11-21 11:59:37,458 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 13:00:08] 2025-11-21 11:59:37,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 13:00:08] 2025-11-21 11:59:37,460 | INFO     | fitting pss+swap vs Time
[2025-11-21 13:00:08] 2025-11-21 11:59:37,460 | INFO     | sum of square deviations: 8797783560.0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,461 | INFO     | sum of deviations: 92249488639.0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,461 | INFO     | mean x: 1763717042.0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,461 | INFO     | mean y: 2634403.9049180327
[2025-11-21 13:00:08] 2025-11-21 11:59:37,461 | INFO     | intersect: -18490886619.74592
[2025-11-21 13:00:08] 2025-11-21 11:59:37,461 | INFO     | chi2: 2.0928462394881326
[2025-11-21 13:00:08] 2025-11-21 11:59:37,461 | INFO     | sum of square deviations: 8372156975.0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,462 | INFO     | sum of deviations: 136717751454.0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,462 | INFO     | mean x: 1763716889.5
[2025-11-21 13:00:08] 2025-11-21 11:59:37,462 | INFO     | mean y: 2650291.34
[2025-11-21 13:00:08] 2025-11-21 11:59:37,462 | INFO     | intersect: -28798936689.640247
[2025-11-21 13:00:08] 2025-11-21 11:59:37,463 | INFO     | chi2: 1.234651800730634
[2025-11-21 13:00:08] 2025-11-21 11:59:37,463 | INFO     | current chi2=1.234651800730634 (change=41.006091253383026 %)
[2025-11-21 13:00:08] 2025-11-21 11:59:37,463 | INFO     | sum of square deviations: 7960484140.0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,464 | INFO     | sum of deviations: 131736899544.00002
[2025-11-21 13:00:08] 2025-11-21 11:59:37,464 | INFO     | mean x: 1763716737.0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,464 | INFO     | mean y: 2648446.3898305083
[2025-11-21 13:00:08] 2025-11-21 11:59:37,464 | INFO     | intersect: -29184844489.968243
[2025-11-21 13:00:08] 2025-11-21 11:59:37,464 | INFO     | chi2: 1.2346776726017876
[2025-11-21 13:00:08] 2025-11-21 11:59:37,464 | INFO     | current chi2=1.2346776726017876 (change=-0.002095479157633721 %)
[2025-11-21 13:00:08] 2025-11-21 11:59:37,464 | INFO     | right removable region: 294
[2025-11-21 13:00:08] 2025-11-21 11:59:37,464 | INFO     | sum of square deviations: 8372156975.0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,465 | INFO     | sum of deviations: 51570659406.00003
[2025-11-21 13:00:08] 2025-11-21 11:59:37,465 | INFO     | mean x: 1763717194.5
[2025-11-21 13:00:08] 2025-11-21 11:59:37,465 | INFO     | mean y: 2648848.38
[2025-11-21 13:00:08] 2025-11-21 11:59:37,465 | INFO     | intersect: -10861464067.523062
[2025-11-21 13:00:08] 2025-11-21 11:59:37,465 | INFO     | chi2: 0.901882665164897
[2025-11-21 13:00:08] 2025-11-21 11:59:37,465 | INFO     | current chi2=0.901882665164897 (change=56.906405824372506 %)
[2025-11-21 13:00:08] 2025-11-21 11:59:37,466 | INFO     | sum of square deviations: 7960484140.0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,466 | INFO     | sum of deviations: 48513901215.999985
[2025-11-21 13:00:08] 2025-11-21 11:59:37,467 | INFO     | mean x: 1763717347.0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,467 | INFO     | mean y: 2649978.125423729
[2025-11-21 13:00:08] 2025-11-21 11:59:37,467 | INFO     | intersect: -10746044151.5891
[2025-11-21 13:00:08] 2025-11-21 11:59:37,467 | INFO     | chi2: 0.9018246843556864
[2025-11-21 13:00:08] 2025-11-21 11:59:37,467 | INFO     | current chi2=0.9018246843556864 (change=0.00642886391435403 %)
[2025-11-21 13:00:08] 2025-11-21 11:59:37,467 | INFO     | left removable region: 20
[2025-11-21 13:00:08] 2025-11-21 11:59:37,467 | INFO     | sum of square deviations: 6378584712.5
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | sum of deviations: 81992105374.99998
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | mean x: 1763717316.5
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | mean y: 2667068.5036496352
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | intersect: -22668646801.92105
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | chi2: 0.02492388341565954
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | current memory leak: 12.85 B/s (using 274 data points, chi2=0.02)
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | could have reported an average CPU frequency of 3963 MHz (14 samples)
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | ..............................
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | . Timing measurements:
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | . get job = 0 s
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | . initial setup = 0 s
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | . payload setup = 3 s
[2025-11-21 13:00:08] 2025-11-21 11:59:37,468 | INFO     | . stage-in = 0 s
[2025-11-21 13:00:08] 2025-11-21 11:59:37,469 | INFO     | . payload execution = 18599 s
[2025-11-21 13:00:08] 2025-11-21 11:59:37,469 | INFO     | . stage-out = 0 s
[2025-11-21 13:00:08] 2025-11-21 11:59:37,469 | INFO     | . log creation = 0 s
[2025-11-21 13:00:08] 2025-11-21 11:59:37,469 | INFO     | ..............................
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | 
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | job summary report
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | --------------------------------------------------
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | PanDA job id: 6893837999
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | task id: 47523449
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | errors: (none)
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | pilot state: finished 
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | transexitcode: 0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | exeerrorcode: 0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | exeerrordiag: 
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | exitcode: 0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | exitmsg: OK
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | cpuconsumptiontime: 108894 s
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | nevents: 1000
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | neventsw: 0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | pid: 1777239
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | pgrp: 1777239
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | corecount: 6
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | event service: False
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | sizes: {0: 2298807, 1: 2298807, 2: 2299097, 11: 2299125, 18606: 2333200, 18607: 2342377, 18610: 2342377, 18613: 2342623}
[2025-11-21 13:00:08] 2025-11-21 11:59:37,500 | INFO     | --------------------------------------------------
[2025-11-21 13:00:08] 2025-11-21 11:59:37,501 | INFO     | 
[2025-11-21 13:00:08] 2025-11-21 11:59:37,501 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-21 13:00:08] 2025-11-21 11:59:37,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | job 6893837999 has completed (purged errors)
[2025-11-21 13:00:08] 2025-11-21 11:59:37,510 | INFO     | overall cleanup function is called
[2025-11-21 13:00:08] 2025-11-21 11:59:38,520 | INFO     | --- collectZombieJob: --- 10, [1777239]
[2025-11-21 13:00:08] 2025-11-21 11:59:38,520 | INFO     | zombie collector waiting for pid 1777239
[2025-11-21 13:00:08] 2025-11-21 11:59:38,520 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 13:00:08] 2025-11-21 11:59:38,520 | INFO     | collected zombie processes
[2025-11-21 13:00:08] 2025-11-21 11:59:38,520 | INFO     | will attempt to kill all subprocesses of pid=1777239
[2025-11-21 13:00:08] 2025-11-21 11:59:38,559 | INFO     | process IDs to be killed: [1777239] (in reverse order)
[2025-11-21 13:00:08] 2025-11-21 11:59:38,579 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 13:00:08] 2025-11-21 11:59:38,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 13:00:08] 2025-11-21 11:59:38,581 | INFO     | did not find any defunct processes belonging to 1777239
[2025-11-21 13:00:08] 2025-11-21 11:59:38,582 | INFO     | did not find any defunct processes belonging to 1777239
[2025-11-21 13:00:08] 2025-11-21 11:59:38,582 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 13:00:08] 2025-11-21 11:59:38,582 | INFO     | ready for new job
[2025-11-21 13:00:08] 2025-11-21 11:59:38,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 13:00:08] 2025-11-21 11:59:38,583 | INFO     | ***************************************
[2025-11-21 13:00:08] 2025-11-21 11:59:38,583 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 13:00:08] 2025-11-21 11:59:38,584 | INFO     | ***************************************
[2025-11-21 13:00:08] 2025-11-21 11:59:38,584 | INFO     | 
[2025-11-21 13:00:08] 2025-11-21 11:59:38,584 | INFO     | architecture information:
[2025-11-21 13:00:08] 2025-11-21 11:59:38,584 | INFO     | executing command: cat /etc/os-release
[2025-11-21 13:00:08] 2025-11-21 11:59:38,597 | INFO     | cat /etc/os-release:
[2025-11-21 13:00:08] NAME="CentOS Linux"
[2025-11-21 13:00:08] VERSION="7 (Core)"
[2025-11-21 13:00:08] ID="centos"
[2025-11-21 13:00:08] ID_LIKE="rhel fedora"
[2025-11-21 13:00:08] VERSION_ID="7"
[2025-11-21 13:00:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 13:00:08] ANSI_COLOR="0;31"
[2025-11-21 13:00:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 13:00:08] HOME_URL="https://www.centos.org/"
[2025-11-21 13:00:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 13:00:08] 
[2025-11-21 13:00:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 13:00:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 13:00:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 13:00:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 13:00:08] 
[2025-11-21 13:00:08] 2025-11-21 11:59:38,597 | INFO     | ***************************************
[2025-11-21 13:00:08] 2025-11-21 11:59:39,100 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-21 13:00:08] 2025-11-21 11:59:39,108 | INFO     | sufficient remaining disk space (107360550912 B)
[2025-11-21 13:00:08] 2025-11-21 11:59:39,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 13:00:08] 2025-11-21 11:59:39,108 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 13:00:08] 2025-11-21 11:59:39,108 | INFO     | update_server=False
[2025-11-21 13:00:08] 2025-11-21 11:59:39,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 13:00:08] 2025-11-21 11:59:39,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 13:00:08] 2025-11-21 11:59:39,250 | INFO     | all job control threads have been joined
[2025-11-21 13:00:08] 2025-11-21 11:59:39,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 13:00:08] 2025-11-21 11:59:39,291 | INFO     | aborting loop
[2025-11-21 13:00:08] 2025-11-21 11:59:39,510 | INFO     | all data control threads have been joined
[2025-11-21 13:00:08] 2025-11-21 11:59:39,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 13:00:08] 2025-11-21 11:59:40,114 | INFO     | [job] queue monitor thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:40,114 | INFO     | [job] retrieve thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:40,256 | INFO     | [job] control thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:40,297 | INFO     | [job] job monitor thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:40,378 | INFO     | [data] copytool_in thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:40,416 | INFO     | all payload control threads have been joined
[2025-11-21 13:00:08] 2025-11-21 11:59:40,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 13:00:08] 2025-11-21 11:59:40,516 | INFO     | [data] control thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:40,574 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:41,061 | INFO     | [payload] failed_post thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:41,222 | INFO     | [job] validate thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:41,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:41,333 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:41,334 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:41,421 | INFO     | [payload] control thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:41,705 | INFO     | [payload] validate_post thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:41,938 | INFO     | [data] copytool_out thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:41,938 | INFO     | [monitor] cgroup control has ended
[2025-11-21 13:00:08] 2025-11-21 11:59:44,500 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 13:00:08] 2025-11-21 11:59:44,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140237413799744)>', '<ExcThread(monitor, started 140237023983360)>']
[2025-11-21 13:00:08] 2025-11-21 11:59:49,735 | INFO     | all workflow threads have been joined
[2025-11-21 13:00:08] 2025-11-21 11:59:49,736 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 13:00:08] 2025-11-21 11:59:49,736 | INFO     | traces error code: 0
[2025-11-21 13:00:08] 2025-11-21 11:59:49,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 13:00:08] 2025-11-21 12:00:08,758 | INFO     | PID=1770030 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 13:00:08] 2025-11-21 12:00:08,759 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 13:00:08] 2025-11-21 12:00:08,759 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 13:00:08] 2025-11-21 12:00:08,759 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 13:00:08] 2025-11-21 12:00:08,759 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 13:00:08] 2025-11-21 12:00:08,759 | INFO     | [monitor] control thread has ended
[2025-11-21 13:00:08] 2025-11-21 12:00:08,812 [wrapper] ==== pilot stdout END ====
[2025-11-21 13:00:08] 2025-11-21 12:00:08,813 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 13:00:08] 2025-11-21 12:00:08,815 [wrapper] pilotpid: 1770030
[2025-11-21 13:00:08] 2025-11-21 12:00:08,816 [wrapper] Pilot exit status: 0
[2025-11-21 13:00:08] 2025-11-21 12:00:08,821 [wrapper] pandaids: 6893837999
[2025-11-21 13:00:08] 2025-11-21 12:00:08,834 [wrapper] cleanup supervisor_pilot 1836172 1770031
[2025-11-21 13:00:08] 2025-11-21 12:00:08,836 [wrapper] Test setup, not cleaning
[2025-11-21 13:00:08] 2025-11-21 12:00:08,838 [wrapper] apfmon messages muted
[2025-11-21 13:00:08] 2025-11-21 12:00:08,839 [wrapper] ==== wrapper stdout END ====
[2025-11-21 13:00:08] 2025-11-21 12:00:08,840 [wrapper] ==== wrapper stderr END ====
[2025-11-21 13:00:08]  *** Error codes and diagnostics ***
[2025-11-21 13:00:08]     "exeErrorCode": 0,
[2025-11-21 13:00:08]     "exeErrorDiag": "",
[2025-11-21 13:00:08]     "pilotErrorCode": 0,
[2025-11-21 13:00:08]     "pilotErrorDiag": "",
[2025-11-21 13:00:08]  *** Listing of results directory ***
[2025-11-21 13:00:08] total 1317884
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:14 queuedata.json
[2025-11-21 13:00:08] -rwx------ 1 boinc boinc     36292 Nov 20 11:14 runpilot2-wrapper.sh
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc       100 Nov 21 07:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 13:00:08] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 07:49 run_atlas
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc       105 Nov 21 07:49 job.xml
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc      6519 Nov 21 07:49 init_data.xml
[2025-11-21 13:00:08] -rw-r--r-- 2 boinc boinc 409677969 Nov 21 07:49 EVNT.47493127._000123.pool.root.1
[2025-11-21 13:00:08] drwxrwx--x 2 boinc boinc        68 Nov 21 07:49 shared
[2025-11-21 13:00:08] -rw-r--r-- 2 boinc boinc    590102 Nov 21 07:49 input.tar.gz
[2025-11-21 13:00:08] -rw-r--r-- 2 boinc boinc     15847 Nov 21 07:49 start_atlas.sh
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc         0 Nov 21 07:49 boinc_lockfile
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc      2786 Nov 21 07:49 pandaJob.out
[2025-11-21 13:00:08] -rw------- 1 boinc boinc    989817 Nov 21 07:49 agis_schedconf.cvmfs.json
[2025-11-21 13:00:08] drwx------ 5 boinc boinc      4096 Nov 21 07:49 pilot3
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc       532 Nov 21 12:53 boinc_task_state.xml
[2025-11-21 13:00:08] -rw------- 1 boinc boinc 927879447 Nov 21 12:59 HITS.47523449._001226.pool.root.1
[2025-11-21 13:00:08] -rw------- 1 boinc boinc      1033 Nov 21 12:59 memory_monitor_summary.json
[2025-11-21 13:00:08] -rw------- 1 boinc boinc   1526164 Nov 21 12:59 agis_ddmendpoints.agis.ALL.json
[2025-11-21 13:00:08] -rw------- 1 boinc boinc   1385412 Nov 21 12:59 log.47523449._001226.job.log.tgz.1
[2025-11-21 13:00:08] -rw------- 1 boinc boinc      8607 Nov 21 12:59 heartbeat.json
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc        29 Nov 21 12:59 wrapper_checkpoint.txt
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc      8192 Nov 21 12:59 boinc_mmap_file
[2025-11-21 13:00:08] -rw------- 1 boinc boinc       747 Nov 21 13:00 pilotlog.txt
[2025-11-21 13:00:08] -rw------- 1 boinc boinc        95 Nov 21 13:00 pilot_heartbeat.json
[2025-11-21 13:00:08] -rw------- 1 boinc boinc   2636150 Nov 21 13:00 log.47523449._001226.job.log.1
[2025-11-21 13:00:08] -rw------- 1 boinc boinc       353 Nov 21 13:00 output.list
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc       620 Nov 21 13:00 runtime_log
[2025-11-21 13:00:08] -rw------- 1 boinc boinc   4044800 Nov 21 13:00 result.tar.gz
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc      8831 Nov 21 13:00 runtime_log.err
[2025-11-21 13:00:08] -rw------- 1 boinc boinc       660 Nov 21 13:00 gWCODmlrGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrHGKDmGS5LBo.diag
[2025-11-21 13:00:08] -rw-r--r-- 1 boinc boinc     21467 Nov 21 13:00 stderr.txt
[2025-11-21 13:00:08] HITS file was successfully produced:
[2025-11-21 13:00:08] -rw------- 1 boinc boinc 927879447 Nov 21 12:59 shared/HITS.pool.root.1
[2025-11-21 13:00:08]  *** Contents of shared directory: ***
[2025-11-21 13:00:08] total 1310764
[2025-11-21 13:00:08] -rw-r--r-- 2 boinc boinc 409677969 Nov 21 07:49 ATLAS.root_0
[2025-11-21 13:00:08] -rw-r--r-- 2 boinc boinc    590102 Nov 21 07:49 input.tar.gz
[2025-11-21 13:00:08] -rw-r--r-- 2 boinc boinc     15847 Nov 21 07:49 start_atlas.sh
[2025-11-21 13:00:08] -rw------- 1 boinc boinc 927879447 Nov 21 12:59 HITS.pool.root.1
[2025-11-21 13:00:08] -rw------- 1 boinc boinc   4044800 Nov 21 13:00 result.tar.gz
13:00:10 (1766342): run_atlas exited; CPU time 108918.407489
13:00:10 (1766342): called boinc_finish(0)

</stderr_txt>
]]>

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