Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:14:12 (21124): wrapper (7.7.26015): starting
05:14:12 (21124): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 05:14:12] Arguments: --nthreads 8
[2025-11-20 05:14:12] Threads: 8
[2025-11-20 05:14:12] Checking for CVMFS
[2025-11-20 05:14:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 05:14:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 05:14:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 05:14:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 05:14:13] 2.11.2.0 2840 58861 80360 153076 2 1 16940232 20275201 1 130560 0 14680440 99.823 3752064 33843 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 05:14:13] CVMFS is ok
[2025-11-20 05:14:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 05:14:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 05:14:13] Further information can be found at the LHC@home message board.
[2025-11-20 05:14:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 05:14:13] Checking for apptainer binary...
[2025-11-20 05:14:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 05:14:13] Running /usr/bin/apptainer --version
[2025-11-20 05:14:13] apptainer version 1.3.2-1.el7
[2025-11-20 05:14:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 05:14:15] c-204-39.aglt2.org
[2025-11-20 05:14:15] apptainer works
[2025-11-20 05:14:15] Set ATHENA_PROC_NUMBER=8
[2025-11-20 05:14:15] Set ATHENA_CORE_NUMBER=8
[2025-11-20 05:14:15] Starting ATLAS job with PandaID=6893834985
[2025-11-20 05:14:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 17:26:54]  *** The last 200 lines of the pilot log: ***
[2025-11-20 17:26:54] 2025-11-20 22:26:18,889 | INFO     | time since job start (43903s) is within the limit (172800.0s)
[2025-11-20 17:26:54] 2025-11-20 22:26:20,863 | INFO     | monitor loop #3239: job 0:6893834985 is in state 'finished'
[2025-11-20 17:26:54] 2025-11-20 22:26:20,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 17:26:54] 2025-11-20 22:26:20,895 | INFO     | time since job start (43905s) is within the limit (172800.0s)
[2025-11-20 17:26:54] 2025-11-20 22:26:21,330 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-20 17:26:54] 2025-11-20 22:26:21,335 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-20 17:26:54] 2025-11-20 22:26:21,337 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893834985/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 17:26:54] 2025-11-20 22:26:21,339 | INFO     | extracted standard info from prmon json
[2025-11-20 17:26:54] 2025-11-20 22:26:21,339 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 17:26:54] 2025-11-20 22:26:21,339 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 17:26:54] 2025-11-20 22:26:21,354 | INFO     | fitting pss+swap vs Time
[2025-11-20 17:26:54] 2025-11-20 22:26:21,355 | INFO     | sum of square deviations: 115256631837.32397
[2025-11-20 17:26:54] 2025-11-20 22:26:21,369 | INFO     | sum of deviations: 679058087683.4656
[2025-11-20 17:26:54] 2025-11-20 22:26:21,369 | INFO     | mean x: 1763655606.5243394
[2025-11-20 17:26:54] 2025-11-20 22:26:21,369 | INFO     | mean y: 2865112.4019471486
[2025-11-20 17:26:54] 2025-11-20 22:26:21,369 | INFO     | intersect: -10388073651.009058
[2025-11-20 17:26:54] 2025-11-20 22:26:21,370 | INFO     | chi2: 5.875457475014259
[2025-11-20 17:26:54] 2025-11-20 22:26:21,371 | INFO     | sum of square deviations: 112868916003.43999
[2025-11-20 17:26:54] 2025-11-20 22:26:21,381 | INFO     | sum of deviations: 906850579621.2585
[2025-11-20 17:26:54] 2025-11-20 22:26:21,381 | INFO     | mean x: 1763655454.0280113
[2025-11-20 17:26:54] 2025-11-20 22:26:21,381 | INFO     | mean y: 2879656.287114846
[2025-11-20 17:26:54] 2025-11-20 22:26:21,382 | INFO     | intersect: -14167292498.89466
[2025-11-20 17:26:54] 2025-11-20 22:26:21,382 | INFO     | chi2: 2.908774262363325
[2025-11-20 17:26:54] 2025-11-20 22:26:21,382 | INFO     | current chi2=2.908774262363325 (change=50.49280375642127 %)
[2025-11-20 17:26:54] 2025-11-20 22:26:21,383 | INFO     | sum of square deviations: 110514410094.53603
[2025-11-20 17:26:54] 2025-11-20 22:26:21,394 | INFO     | sum of deviations: 1006261536264.9883
[2025-11-20 17:26:54] 2025-11-20 22:26:21,394 | INFO     | mean x: 1763655301.531735
[2025-11-20 17:26:54] 2025-11-20 22:26:21,395 | INFO     | mean y: 2886088.5782792666
[2025-11-20 17:26:54] 2025-11-20 22:26:21,395 | INFO     | intersect: -16055639597.285725
[2025-11-20 17:26:54] 2025-11-20 22:26:21,395 | INFO     | chi2: 2.2339079740569003
[2025-11-20 17:26:54] 2025-11-20 22:26:21,396 | INFO     | current chi2=2.2339079740569003 (change=23.20105403291448 %)
[2025-11-20 17:26:54] 2025-11-20 22:26:21,396 | INFO     | right removable region: 708
[2025-11-20 17:26:54] 2025-11-20 22:26:21,397 | INFO     | sum of square deviations: 112868686033.44006
[2025-11-20 17:26:54] 2025-11-20 22:26:21,408 | INFO     | sum of deviations: 490196316511.0719
[2025-11-20 17:26:54] 2025-11-20 22:26:21,408 | INFO     | mean x: 1763655759.0280113
[2025-11-20 17:26:54] 2025-11-20 22:26:21,408 | INFO     | mean y: 2877153.8963585435
[2025-11-20 17:26:54] 2025-11-20 22:26:21,408 | INFO     | intersect: -7656798767.314683
[2025-11-20 17:26:54] 2025-11-20 22:26:21,409 | INFO     | chi2: 3.8197529472579754
[2025-11-20 17:26:54] 2025-11-20 22:26:21,409 | INFO     | current chi2=3.8197529472579754 (change=34.987990918124964 %)
[2025-11-20 17:26:54] 2025-11-20 22:26:21,410 | INFO     | sum of square deviations: 110514037018.65753
[2025-11-20 17:26:54] 2025-11-20 22:26:21,421 | INFO     | sum of deviations: 444694561870.04266
[2025-11-20 17:26:54] 2025-11-20 22:26:21,421 | INFO     | mean x: 1763655911.528914
[2025-11-20 17:26:54] 2025-11-20 22:26:21,422 | INFO     | mean y: 2880099.119887165
[2025-11-20 17:26:54] 2025-11-20 22:26:21,422 | INFO     | intersect: -7093849094.968405
[2025-11-20 17:26:54] 2025-11-20 22:26:21,422 | INFO     | chi2: 3.7594539992367926
[2025-11-20 17:26:54] 2025-11-20 22:26:21,423 | INFO     | current chi2=3.7594539992367926 (change=1.5786085868320014 %)
[2025-11-20 17:26:54] 2025-11-20 22:26:21,423 | INFO     | left removable region: 20
[2025-11-20 17:26:54] 2025-11-20 22:26:21,424 | INFO     | sum of square deviations: 100982226117.94012
[2025-11-20 17:26:54] 2025-11-20 22:26:21,434 | INFO     | sum of deviations: 715482455267.359
[2025-11-20 17:26:54] 2025-11-20 22:26:21,434 | INFO     | mean x: 1763655881.0392442
[2025-11-20 17:26:54] 2025-11-20 22:26:21,434 | INFO     | mean y: 2906051.6904069767
[2025-11-20 17:26:54] 2025-11-20 22:26:21,434 | INFO     | intersect: -12493004253.742022
[2025-11-20 17:26:54] 2025-11-20 22:26:21,435 | INFO     | chi2: 0.057600304602724105
[2025-11-20 17:26:54] 2025-11-20 22:26:21,435 | INFO     | current memory leak: 7.09 B/s (using 688 data points, chi2=0.06)
[2025-11-20 17:26:54] 2025-11-20 22:26:21,436 | INFO     | could have reported an average CPU frequency of 2156 MHz (28 samples)
[2025-11-20 17:26:54] 2025-11-20 22:26:21,436 | INFO     | ..............................
[2025-11-20 17:26:54] 2025-11-20 22:26:21,436 | INFO     | . Timing measurements:
[2025-11-20 17:26:54] 2025-11-20 22:26:21,436 | INFO     | . get job = 0 s
[2025-11-20 17:26:54] 2025-11-20 22:26:21,436 | INFO     | . initial setup = 2 s
[2025-11-20 17:26:54] 2025-11-20 22:26:21,437 | INFO     | . payload setup = 9 s
[2025-11-20 17:26:54] 2025-11-20 22:26:21,437 | INFO     | . stage-in = 0 s
[2025-11-20 17:26:54] 2025-11-20 22:26:21,437 | INFO     | . payload execution = 43864 s
[2025-11-20 17:26:54] 2025-11-20 22:26:21,437 | INFO     | . stage-out = 3 s
[2025-11-20 17:26:54] 2025-11-20 22:26:21,437 | INFO     | . log creation = 0 s
[2025-11-20 17:26:54] 2025-11-20 22:26:21,437 | INFO     | ..............................
[2025-11-20 17:26:54] 2025-11-20 22:26:21,650 | INFO     | 
[2025-11-20 17:26:54] 2025-11-20 22:26:21,650 | INFO     | job summary report
[2025-11-20 17:26:54] 2025-11-20 22:26:21,650 | INFO     | --------------------------------------------------
[2025-11-20 17:26:54] 2025-11-20 22:26:21,651 | INFO     | PanDA job id: 6893834985
[2025-11-20 17:26:54] 2025-11-20 22:26:21,651 | INFO     | task id: 47523449
[2025-11-20 17:26:54] 2025-11-20 22:26:21,651 | INFO     | errors: (none)
[2025-11-20 17:26:54] 2025-11-20 22:26:21,651 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 17:26:54] 2025-11-20 22:26:21,651 | INFO     | pilot state: finished 
[2025-11-20 17:26:54] 2025-11-20 22:26:21,651 | INFO     | transexitcode: 0
[2025-11-20 17:26:54] 2025-11-20 22:26:21,652 | INFO     | exeerrorcode: 0
[2025-11-20 17:26:54] 2025-11-20 22:26:21,652 | INFO     | exeerrordiag: 
[2025-11-20 17:26:54] 2025-11-20 22:26:21,652 | INFO     | exitcode: 0
[2025-11-20 17:26:54] 2025-11-20 22:26:21,652 | INFO     | exitmsg: OK
[2025-11-20 17:26:54] 2025-11-20 22:26:21,652 | INFO     | cpuconsumptiontime: 338795 s
[2025-11-20 17:26:54] 2025-11-20 22:26:21,653 | INFO     | nevents: 1000
[2025-11-20 17:26:54] 2025-11-20 22:26:21,653 | INFO     | neventsw: 0
[2025-11-20 17:26:54] 2025-11-20 22:26:21,653 | INFO     | pid: 31791
[2025-11-20 17:26:54] 2025-11-20 22:26:21,653 | INFO     | pgrp: 31791
[2025-11-20 17:26:54] 2025-11-20 22:26:21,653 | INFO     | corecount: 8
[2025-11-20 17:26:54] 2025-11-20 22:26:21,654 | INFO     | event service: False
[2025-11-20 17:26:54] 2025-11-20 22:26:21,654 | INFO     | sizes: {0: 2296980, 1: 2297235, 7: 2297497, 12: 2297525, 43876: 2343113, 43880: 2353887, 43889: 2354077}
[2025-11-20 17:26:54] 2025-11-20 22:26:21,654 | INFO     | --------------------------------------------------
[2025-11-20 17:26:54] 2025-11-20 22:26:21,654 | INFO     | 
[2025-11-20 17:26:54] 2025-11-20 22:26:21,654 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 17:26:54] 2025-11-20 22:26:21,682 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,682 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,683 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,683 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,683 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,683 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,684 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,684 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,684 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,684 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,684 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,685 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,685 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 17:26:54] 2025-11-20 22:26:21,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,686 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 17:26:54] 2025-11-20 22:26:21,686 | INFO     | job 6893834985 has completed (purged errors)
[2025-11-20 17:26:54] 2025-11-20 22:26:21,686 | INFO     | overall cleanup function is called
[2025-11-20 17:26:54] 2025-11-20 22:26:22,702 | INFO     | --- collectZombieJob: --- 10, [31791]
[2025-11-20 17:26:54] 2025-11-20 22:26:22,703 | INFO     | zombie collector waiting for pid 31791
[2025-11-20 17:26:54] 2025-11-20 22:26:22,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 17:26:54] 2025-11-20 22:26:22,703 | INFO     | collected zombie processes
[2025-11-20 17:26:54] 2025-11-20 22:26:22,704 | INFO     | will attempt to kill all subprocesses of pid=31791
[2025-11-20 17:26:54] 2025-11-20 22:26:22,795 | INFO     | process IDs to be killed: [31791] (in reverse order)
[2025-11-20 17:26:54] 2025-11-20 22:26:22,849 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 17:26:54] 2025-11-20 22:26:22,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 17:26:54] 2025-11-20 22:26:22,854 | INFO     | did not find any defunct processes belonging to 31791
[2025-11-20 17:26:54] 2025-11-20 22:26:22,857 | INFO     | did not find any defunct processes belonging to 31791
[2025-11-20 17:26:54] 2025-11-20 22:26:22,860 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 17:26:54] 2025-11-20 22:26:22,860 | INFO     | ready for new job
[2025-11-20 17:26:54] 2025-11-20 22:26:22,860 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 17:26:54] 2025-11-20 22:26:22,864 | INFO     | ***************************************
[2025-11-20 17:26:54] 2025-11-20 22:26:22,864 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 17:26:54] 2025-11-20 22:26:22,865 | INFO     | ***************************************
[2025-11-20 17:26:54] 2025-11-20 22:26:22,865 | INFO     | 
[2025-11-20 17:26:54] 2025-11-20 22:26:22,865 | INFO     | architecture information:
[2025-11-20 17:26:54] 2025-11-20 22:26:22,866 | INFO     | executing command: cat /etc/os-release
[2025-11-20 17:26:54] 2025-11-20 22:26:22,884 | INFO     | cat /etc/os-release:
[2025-11-20 17:26:54] NAME="CentOS Linux"
[2025-11-20 17:26:54] VERSION="7 (Core)"
[2025-11-20 17:26:54] ID="centos"
[2025-11-20 17:26:54] ID_LIKE="rhel fedora"
[2025-11-20 17:26:54] VERSION_ID="7"
[2025-11-20 17:26:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 17:26:54] ANSI_COLOR="0;31"
[2025-11-20 17:26:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 17:26:54] HOME_URL="https://www.centos.org/"
[2025-11-20 17:26:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 17:26:54] 
[2025-11-20 17:26:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 17:26:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 17:26:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 17:26:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 17:26:54] 
[2025-11-20 17:26:54] 2025-11-20 22:26:22,884 | INFO     | ***************************************
[2025-11-20 17:26:54] 2025-11-20 22:26:23,386 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 17:26:54] 2025-11-20 22:26:23,409 | INFO     | sufficient remaining disk space (17452498944 B)
[2025-11-20 17:26:54] 2025-11-20 22:26:23,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 17:26:54] 2025-11-20 22:26:23,409 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 17:26:54] 2025-11-20 22:26:23,410 | INFO     | update_server=False
[2025-11-20 17:26:54] 2025-11-20 22:26:23,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 17:26:54] 2025-11-20 22:26:23,410 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 17:26:54] 2025-11-20 22:26:23,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:26:54] 2025-11-20 22:26:23,455 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 17:26:54] 2025-11-20 22:26:23,615 | INFO     | all payload control threads have been joined
[2025-11-20 17:26:54] 2025-11-20 22:26:24,115 | INFO     | all data control threads have been joined
[2025-11-20 17:26:54] 2025-11-20 22:26:24,226 | INFO     | all job control threads have been joined
[2025-11-20 17:26:54] 2025-11-20 22:26:24,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:26:54] 2025-11-20 22:26:24,373 | INFO     | aborting loop
[2025-11-20 17:26:54] 2025-11-20 22:26:24,415 | INFO     | [job] retrieve thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:24,417 | INFO     | [job] queue monitor thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:24,433 | INFO     | [payload] validate_post thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:24,619 | INFO     | [payload] control thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:24,754 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:24,755 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:24,928 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:25,072 | INFO     | [payload] failed_post thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:25,116 | INFO     | [data] control thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:25,190 | INFO     | [job] validate thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:25,231 | INFO     | [job] control thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:25,379 | INFO     | [job] job monitor thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:25,416 | INFO     | [data] copytool_out thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:25,636 | INFO     | [data] copytool_in thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:25,684 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:27,457 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 17:26:54] 2025-11-20 22:26:47,243 | INFO     | [monitor] cgroup control has ended
[2025-11-20 17:26:54] 2025-11-20 22:26:47,620 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824628844352)>', '<ExcThread(monitor, started 139824178644736)>']
[2025-11-20 17:26:54] 2025-11-20 22:26:52,645 | INFO     | all workflow threads have been joined
[2025-11-20 17:26:54] 2025-11-20 22:26:52,646 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 17:26:54] 2025-11-20 22:26:52,646 | INFO     | traces error code: 0
[2025-11-20 17:26:54] 2025-11-20 22:26:52,647 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 17:26:54] 2025-11-20 22:26:54,112 | INFO     | PID=25165 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 17:26:54] 2025-11-20 22:26:54,112 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 17:26:54] 2025-11-20 22:26:54,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 17:26:54] 2025-11-20 22:26:54,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 17:26:54] 2025-11-20 22:26:54,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 17:26:54] 2025-11-20 22:26:54,113 | INFO     | [monitor] control thread has ended
[2025-11-20 17:26:54] 2025-11-20 22:26:54,230 [wrapper] ==== pilot stdout END ====
[2025-11-20 17:26:54] 2025-11-20 22:26:54,235 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 17:26:54] 2025-11-20 22:26:54,239 [wrapper] pilotpid: 25165
[2025-11-20 17:26:54] 2025-11-20 22:26:54,244 [wrapper] Pilot exit status: 0
[2025-11-20 17:26:54] 2025-11-20 22:26:54,261 [wrapper] pandaids: 6893834985
[2025-11-20 17:26:54] 2025-11-20 22:26:54,303 [wrapper] cleanup supervisor_pilot 22154 25166
[2025-11-20 17:26:54] 2025-11-20 22:26:54,308 [wrapper] Test setup, not cleaning
[2025-11-20 17:26:54] 2025-11-20 22:26:54,313 [wrapper] apfmon messages muted
[2025-11-20 17:26:54] 2025-11-20 22:26:54,317 [wrapper] ==== wrapper stdout END ====
[2025-11-20 17:26:54] 2025-11-20 22:26:54,322 [wrapper] ==== wrapper stderr END ====
[2025-11-20 17:26:54]  *** Error codes and diagnostics ***
[2025-11-20 17:26:54]     "exeErrorCode": 0,
[2025-11-20 17:26:54]     "exeErrorDiag": "",
[2025-11-20 17:26:54]     "pilotErrorCode": 0,
[2025-11-20 17:26:54]     "pilotErrorDiag": "",
[2025-11-20 17:26:54]  *** Listing of results directory ***
[2025-11-20 17:26:54] total 1300272
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-20 17:26:54] -rwx------ 1 boincer umatlas     36292 Nov 20 05:11 runpilot2-wrapper.sh
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 05:12 queuedata.json
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas       100 Nov 20 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 17:26:54] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 05:14 run_atlas
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas       105 Nov 20 05:14 job.xml
[2025-11-20 17:26:54] -rw-r--r-- 2 boincer umatlas 407996092 Nov 20 05:14 EVNT.47493127._000081.pool.root.1
[2025-11-20 17:26:54] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 05:14 start_atlas.sh
[2025-11-20 17:26:54] drwxrwx--x 2 boincer umatlas      4096 Nov 20 05:14 shared
[2025-11-20 17:26:54] -rw-r--r-- 2 boincer umatlas    590096 Nov 20 05:14 input.tar.gz
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas         0 Nov 20 05:14 boinc_lockfile
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas      2784 Nov 20 05:14 pandaJob.out
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas        57 Nov 20 05:14 setup.sh.local
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas    989435 Nov 20 05:14 agis_schedconf.cvmfs.json
[2025-11-20 17:26:54] drwx------ 5 boincer umatlas      4096 Nov 20 05:14 pilot3
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas       532 Nov 20 17:15 boinc_task_state.xml
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas      5911 Nov 20 17:21 init_data.xml
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas 903486548 Nov 20 17:25 HITS.47523449._000802.pool.root.1
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas      1062 Nov 20 17:26 memory_monitor_summary.json
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas   1526164 Nov 20 17:26 agis_ddmendpoints.agis.ALL.json
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas   1971763 Nov 20 17:26 log.47523449._000802.job.log.tgz.1
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas        95 Nov 20 17:26 pilot_heartbeat.json
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas      8671 Nov 20 17:26 heartbeat.json
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas        29 Nov 20 17:26 wrapper_checkpoint.txt
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 17:26 boinc_mmap_file
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas       745 Nov 20 17:26 pilotlog.txt
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas   6062134 Nov 20 17:26 log.47523449._000802.job.log.1
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas       353 Nov 20 17:26 output.list
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas       620 Nov 20 17:26 runtime_log
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas   8058880 Nov 20 17:26 result.tar.gz
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas      9343 Nov 20 17:26 runtime_log.err
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas       668 Nov 20 17:26 qqAODmmoGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsEGKDmRAuG7m.diag
[2025-11-20 17:26:54] -rw-r--r-- 1 boincer umatlas     21303 Nov 20 17:26 stderr.txt
[2025-11-20 17:26:54] HITS file was successfully produced:
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas 903486548 Nov 20 17:25 shared/HITS.pool.root.1
[2025-11-20 17:26:54]  *** Contents of shared directory: ***
[2025-11-20 17:26:54] total 1289220
[2025-11-20 17:26:54] -rw-r--r-- 2 boincer umatlas 407996092 Nov 20 05:14 ATLAS.root_0
[2025-11-20 17:26:54] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 05:14 start_atlas.sh
[2025-11-20 17:26:54] -rw-r--r-- 2 boincer umatlas    590096 Nov 20 05:14 input.tar.gz
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas 903486548 Nov 20 17:25 HITS.pool.root.1
[2025-11-20 17:26:54] -rw------- 1 boincer umatlas   8058880 Nov 20 17:26 result.tar.gz
17:26:56 (21124): run_atlas exited; CPU time 334805.021803
17:26:56 (21124): called boinc_finish(0)

</stderr_txt>
]]>

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