Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:29:48 (19749): wrapper (7.7.26015): starting
23:29:48 (19749): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:29:48] Arguments: --nthreads 8
[2025-11-22 23:29:48] Threads: 8
[2025-11-22 23:29:48] Checking for CVMFS
[2025-11-22 23:29:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:29:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:29:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:29:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:29:50] 2.11.2.0 11156 280064 142080 153187 3 84 20264257 25165825 4632 130560 2 139184760 99.880 74147276 2807 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 23:29:50] CVMFS is ok
[2025-11-22 23:29:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:29:51] Checking for apptainer binary...
[2025-11-22 23:29:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:29:51] Running /usr/bin/apptainer --version
[2025-11-22 23:29:51] apptainer version 1.3.2-1.el7
[2025-11-22 23:29:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:30:00] cg-vwn264.simple-grid.lan
[2025-11-22 23:30:00] apptainer works
[2025-11-22 23:30:00] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:30:00] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:30:00] Starting ATLAS job with PandaID=6891572721
[2025-11-22 23:30:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:17:46]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:17:46] 2025-11-24 00:16:41,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:17:46] 2025-11-24 00:16:43,444 | INFO     | time since job start (92568s) is within the limit (172800.0s)
[2025-11-24 01:17:46] 2025-11-24 00:16:44,032 | INFO     | monitor loop #6214: job 0:6891572721 is in state 'finished'
[2025-11-24 01:17:46] 2025-11-24 00:16:44,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:17:46] 2025-11-24 00:16:45,452 | INFO     | time since job start (92570s) is within the limit (172800.0s)
[2025-11-24 01:17:46] 2025-11-24 00:16:46,539 | INFO     | monitor loop #6215: job 0:6891572721 is in state 'finished'
[2025-11-24 01:17:46] 2025-11-24 00:16:46,540 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:17:46] 2025-11-24 00:16:47,462 | INFO     | time since job start (92572s) is within the limit (172800.0s)
[2025-11-24 01:17:46] 2025-11-24 00:16:49,044 | INFO     | monitor loop #6216: job 0:6891572721 is in state 'finished'
[2025-11-24 01:17:46] 2025-11-24 00:16:49,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:17:46] 2025-11-24 00:16:49,468 | INFO     | time since job start (92574s) is within the limit (172800.0s)
[2025-11-24 01:17:46] 2025-11-24 00:16:50,625 | INFO     | PID=23514 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:17:46] 2025-11-24 00:16:50,625 | INFO     | .. there are 9 such processes running
[2025-11-24 01:17:46] 2025-11-24 00:16:51,543 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 01:17:46] 2025-11-24 00:16:51,544 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 01:17:46] 2025-11-24 00:16:51,546 | INFO     | using path: /var/lib/boinc/slots/27/PanDA_Pilot-6891572721/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:17:46] 2025-11-24 00:16:51,547 | INFO     | extracted standard info from prmon json
[2025-11-24 01:17:46] 2025-11-24 00:16:51,547 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:17:46] 2025-11-24 00:16:51,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:17:46] 2025-11-24 00:16:51,578 | INFO     | fitting pss+swap vs Time
[2025-11-24 01:17:46] 2025-11-24 00:16:51,581 | INFO     | sum of square deviations: 1063363171250.5205
[2025-11-24 01:17:46] 2025-11-24 00:16:51,594 | INFO     | monitor loop #6217: job 0:6891572721 is in state 'finished'
[2025-11-24 01:17:46] 2025-11-24 00:16:51,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:17:46] 2025-11-24 00:16:51,629 | INFO     | time since job start (92576s) is within the limit (172800.0s)
[2025-11-24 01:17:46] 2025-11-24 00:16:51,659 | INFO     | sum of deviations: 3444299809183.362
[2025-11-24 01:17:46] 2025-11-24 00:16:51,659 | INFO     | mean x: 1763897320.8381963
[2025-11-24 01:17:46] 2025-11-24 00:16:51,660 | INFO     | mean y: 2818226.3375331564
[2025-11-24 01:17:46] 2025-11-24 00:16:51,660 | INFO     | intersect: -5710555501.320678
[2025-11-24 01:17:46] 2025-11-24 00:16:51,662 | INFO     | chi2: 30.45540214391484
[2025-11-24 01:17:46] 2025-11-24 00:16:51,664 | INFO     | sum of square deviations: 1052821579766.5361
[2025-11-24 01:17:46] 2025-11-24 00:16:51,743 | INFO     | sum of deviations: 3955307436837.597
[2025-11-24 01:17:46] 2025-11-24 00:16:51,743 | INFO     | mean x: 1763897168.342648
[2025-11-24 01:17:46] 2025-11-24 00:16:51,743 | INFO     | mean y: 2825616.9095143047
[2025-11-24 01:17:46] 2025-11-24 00:16:51,744 | INFO     | intersect: -6623896063.044609
[2025-11-24 01:17:46] 2025-11-24 00:16:51,745 | INFO     | chi2: 26.97996273814112
[2025-11-24 01:17:46] 2025-11-24 00:16:51,745 | INFO     | current chi2=26.97996273814112 (change=11.411569577544169 %)
[2025-11-24 01:17:46] 2025-11-24 00:16:51,745 | INFO     | right removable region: 1502
[2025-11-24 01:17:46] 2025-11-24 00:16:51,748 | INFO     | sum of square deviations: 1052820348786.5371
[2025-11-24 01:17:46] 2025-11-24 00:16:51,821 | INFO     | sum of deviations: 2801229856789.126
[2025-11-24 01:17:46] 2025-11-24 00:16:51,821 | INFO     | mean x: 1763897473.342648
[2025-11-24 01:17:46] 2025-11-24 00:16:51,821 | INFO     | mean y: 2827528.372588157
[2025-11-24 01:17:46] 2025-11-24 00:16:51,821 | INFO     | intersect: -4690358989.476667
[2025-11-24 01:17:46] 2025-11-24 00:16:51,823 | INFO     | chi2: 25.496526161157146
[2025-11-24 01:17:46] 2025-11-24 00:16:51,824 | INFO     | current chi2=25.496526161157146 (change=16.282418335259134 %)
[2025-11-24 01:17:46] 2025-11-24 00:16:51,824 | INFO     | left removable region: 10
[2025-11-24 01:17:46] 2025-11-24 00:16:51,826 | INFO     | sum of square deviations: 1029873366265.5603
[2025-11-24 01:17:46] 2025-11-24 00:16:51,920 | INFO     | sum of deviations: 2820141918256.3286
[2025-11-24 01:17:46] 2025-11-24 00:16:51,920 | INFO     | mean x: 1763897442.852547
[2025-11-24 01:17:46] 2025-11-24 00:16:51,921 | INFO     | mean y: 2844978.0288203754
[2025-11-24 01:17:46] 2025-11-24 00:16:51,921 | INFO     | intersect: -4827303349.946213
[2025-11-24 01:17:46] 2025-11-24 00:16:51,923 | INFO     | chi2: 17.340179930694838
[2025-11-24 01:17:46] 2025-11-24 00:16:51,923 | INFO     | current memory leak: 2.74 B/s (using 1492 data points, chi2=17.34)
[2025-11-24 01:17:46] 2025-11-24 00:16:51,926 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 01:17:46] 2025-11-24 00:16:51,927 | INFO     | ..............................
[2025-11-24 01:17:46] 2025-11-24 00:16:51,927 | INFO     | . Timing measurements:
[2025-11-24 01:17:46] 2025-11-24 00:16:51,927 | INFO     | . get job = 0 s
[2025-11-24 01:17:46] 2025-11-24 00:16:51,927 | INFO     | . initial setup = 12 s
[2025-11-24 01:17:46] 2025-11-24 00:16:51,927 | INFO     | . payload setup = 160 s
[2025-11-24 01:17:46] 2025-11-24 00:16:51,927 | INFO     | . stage-in = 0 s
[2025-11-24 01:17:46] 2025-11-24 00:16:51,927 | INFO     | . payload execution = 92087 s
[2025-11-24 01:17:46] 2025-11-24 00:16:51,927 | INFO     | . stage-out = 12 s
[2025-11-24 01:17:46] 2025-11-24 00:16:51,927 | INFO     | . log creation = 2 s
[2025-11-24 01:17:46] 2025-11-24 00:16:51,928 | INFO     | ..............................
[2025-11-24 01:17:46] 2025-11-24 00:16:52,050 | INFO     | 
[2025-11-24 01:17:46] 2025-11-24 00:16:52,050 | INFO     | job summary report
[2025-11-24 01:17:46] 2025-11-24 00:16:52,050 | INFO     | --------------------------------------------------
[2025-11-24 01:17:46] 2025-11-24 00:16:52,050 | INFO     | PanDA job id: 6891572721
[2025-11-24 01:17:46] 2025-11-24 00:16:52,050 | INFO     | task id: 47493068
[2025-11-24 01:17:46] 2025-11-24 00:16:52,050 | INFO     | errors: (none)
[2025-11-24 01:17:46] 2025-11-24 00:16:52,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:17:46] 2025-11-24 00:16:52,051 | INFO     | pilot state: finished 
[2025-11-24 01:17:46] 2025-11-24 00:16:52,051 | INFO     | transexitcode: 0
[2025-11-24 01:17:46] 2025-11-24 00:16:52,051 | INFO     | exeerrorcode: 0
[2025-11-24 01:17:46] 2025-11-24 00:16:52,051 | INFO     | exeerrordiag: 
[2025-11-24 01:17:46] 2025-11-24 00:16:52,051 | INFO     | exitcode: 0
[2025-11-24 01:17:46] 2025-11-24 00:16:52,051 | INFO     | exitmsg: OK
[2025-11-24 01:17:46] 2025-11-24 00:16:52,051 | INFO     | cpuconsumptiontime: 339105 s
[2025-11-24 01:17:46] 2025-11-24 00:16:52,051 | INFO     | nevents: 1000
[2025-11-24 01:17:46] 2025-11-24 00:16:52,051 | INFO     | neventsw: 0
[2025-11-24 01:17:46] 2025-11-24 00:16:52,051 | INFO     | pid: 30133
[2025-11-24 01:17:46] 2025-11-24 00:16:52,051 | INFO     | pgrp: 30133
[2025-11-24 01:17:46] 2025-11-24 00:16:52,051 | INFO     | corecount: 8
[2025-11-24 01:17:46] 2025-11-24 00:16:52,052 | INFO     | event service: False
[2025-11-24 01:17:46] 2025-11-24 00:16:52,052 | INFO     | sizes: {0: 2297968, 1: 2298654, 2: 2298853, 3: 2298853, 13: 2298881, 24: 2298937, 35: 2299093, 46: 2299121, 56: 2299149, 67: 2299177, 78: 2299205, 89: 2299541, 99:
[2025-11-24 01:17:46] 2025-11-24 00:16:52,052 | INFO     | --------------------------------------------------
[2025-11-24 01:17:46] 2025-11-24 00:16:52,052 | INFO     | 
[2025-11-24 01:17:46] 2025-11-24 00:16:52,052 | INFO     | executing command: ls -lF /var/lib/boinc/slots/27
[2025-11-24 01:17:46] 2025-11-24 00:16:52,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,542 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,542 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,542 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,543 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:17:46] 2025-11-24 00:16:52,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,543 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:17:46] 2025-11-24 00:16:52,543 | INFO     | job 6891572721 has completed (purged errors)
[2025-11-24 01:17:46] 2025-11-24 00:16:52,543 | INFO     | overall cleanup function is called
[2025-11-24 01:17:46] 2025-11-24 00:16:53,566 | INFO     | --- collectZombieJob: --- 10, [30133]
[2025-11-24 01:17:46] 2025-11-24 00:16:53,567 | INFO     | zombie collector waiting for pid 30133
[2025-11-24 01:17:46] 2025-11-24 00:16:53,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:17:46] 2025-11-24 00:16:53,567 | INFO     | collected zombie processes
[2025-11-24 01:17:46] 2025-11-24 00:16:53,567 | INFO     | will attempt to kill all subprocesses of pid=30133
[2025-11-24 01:17:46] 2025-11-24 00:16:53,681 | INFO     | process IDs to be killed: [30133] (in reverse order)
[2025-11-24 01:17:46] 2025-11-24 00:16:54,306 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:17:46] 2025-11-24 00:16:54,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:17:46] 2025-11-24 00:16:54,310 | INFO     | did not find any defunct processes belonging to 30133
[2025-11-24 01:17:46] 2025-11-24 00:16:54,313 | INFO     | did not find any defunct processes belonging to 30133
[2025-11-24 01:17:46] 2025-11-24 00:16:54,362 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:17:46] 2025-11-24 00:16:54,362 | INFO     | ready for new job
[2025-11-24 01:17:46] 2025-11-24 00:16:54,362 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:17:46] 2025-11-24 00:16:54,369 | INFO     | ***************************************
[2025-11-24 01:17:46] 2025-11-24 00:16:54,369 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:17:46] 2025-11-24 00:16:54,370 | INFO     | ***************************************
[2025-11-24 01:17:46] 2025-11-24 00:16:54,370 | INFO     | 
[2025-11-24 01:17:46] 2025-11-24 00:16:54,370 | INFO     | pilot is running in a VM
[2025-11-24 01:17:46] 2025-11-24 00:16:54,371 | INFO     | architecture information:
[2025-11-24 01:17:46] 2025-11-24 00:16:54,380 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:17:46] 2025-11-24 00:16:54,583 | INFO     | cat /etc/os-release:
[2025-11-24 01:17:46] NAME="CentOS Linux"
[2025-11-24 01:17:46] VERSION="7 (Core)"
[2025-11-24 01:17:46] ID="centos"
[2025-11-24 01:17:46] ID_LIKE="rhel fedora"
[2025-11-24 01:17:46] VERSION_ID="7"
[2025-11-24 01:17:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:17:46] ANSI_COLOR="0;31"
[2025-11-24 01:17:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:17:46] HOME_URL="https://www.centos.org/"
[2025-11-24 01:17:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:17:46] 
[2025-11-24 01:17:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:17:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:17:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:17:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:17:46] 
[2025-11-24 01:17:46] 2025-11-24 00:16:54,584 | INFO     | ***************************************
[2025-11-24 01:17:46] 2025-11-24 00:16:55,088 | INFO     | executing command: df -mP /var/lib/boinc/slots/27
[2025-11-24 01:17:46] 2025-11-24 00:16:55,300 | INFO     | sufficient remaining disk space (495082012672 B)
[2025-11-24 01:17:46] 2025-11-24 00:16:55,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:17:46] 2025-11-24 00:16:55,301 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:17:46] 2025-11-24 00:16:55,301 | INFO     | update_server=False
[2025-11-24 01:17:46] 2025-11-24 00:16:55,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:17:46] 2025-11-24 00:16:55,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:17:46] 2025-11-24 00:16:55,303 | INFO     | aborting loop
[2025-11-24 01:17:46] 2025-11-24 00:16:55,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:17:46] 2025-11-24 00:16:55,483 | INFO     | all payload control threads have been joined
[2025-11-24 01:17:46] 2025-11-24 00:16:55,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:17:46] 2025-11-24 00:16:56,256 | INFO     | all data control threads have been joined
[2025-11-24 01:17:46] 2025-11-24 00:16:56,308 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:56,309 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:56,332 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:56,375 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:56,469 | INFO     | [job] validate thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:56,489 | INFO     | [payload] control thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:56,547 | INFO     | all job control threads have been joined
[2025-11-24 01:17:46] 2025-11-24 00:16:56,663 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:56,972 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:57,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:17:46] 2025-11-24 00:16:57,262 | INFO     | [data] control thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:57,290 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:57,553 | INFO     | [job] control thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:57,700 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:57,732 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:57,888 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:58,074 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:16:59,317 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:17:46] 2025-11-24 00:17:24,785 | INFO     | PID=23514 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:17:46] 2025-11-24 00:17:24,785 | INFO     | .. there are 9 such processes running
[2025-11-24 01:17:46] 2025-11-24 00:17:24,787 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:17:46] 2025-11-24 00:17:24,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:17:46] 2025-11-24 00:17:24,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:17:46] 2025-11-24 00:17:36,470 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:17:46] 2025-11-24 00:17:36,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572900566848)>', '<ExcThread(monitor, started 140572316653312)>']
[2025-11-24 01:17:46] 2025-11-24 00:17:37,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:17:46] 2025-11-24 00:17:37,867 | INFO     | [monitor] control thread has ended
[2025-11-24 01:17:46] 2025-11-24 00:17:41,952 | INFO     | all workflow threads have been joined
[2025-11-24 01:17:46] 2025-11-24 00:17:41,953 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:17:46] 2025-11-24 00:17:41,953 | INFO     | traces error code: 0
[2025-11-24 01:17:46] 2025-11-24 00:17:41,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:17:46] 2025-11-24 00:17:42,336 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:17:46] 2025-11-24 00:17:42,438 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:17:46] 2025-11-24 00:17:42,566 [wrapper] pilotpid: 23514
[2025-11-24 01:17:46] 2025-11-24 00:17:42,670 [wrapper] Pilot exit status: 0
[2025-11-24 01:17:46] 2025-11-24 00:17:43,050 [wrapper] pandaids: 6891572721
[2025-11-24 01:17:46] 2025-11-24 00:17:43,949 [wrapper] cleanup supervisor_pilot 21817 23515
[2025-11-24 01:17:46] 2025-11-24 00:17:44,067 [wrapper] Test setup, not cleaning
[2025-11-24 01:17:46] 2025-11-24 00:17:44,168 [wrapper] apfmon messages muted
[2025-11-24 01:17:46] 2025-11-24 00:17:44,284 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:17:46] 2025-11-24 00:17:44,382 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:17:46]  *** Error codes and diagnostics ***
[2025-11-24 01:17:46]     "exeErrorCode": 0,
[2025-11-24 01:17:46]     "exeErrorDiag": "",
[2025-11-24 01:17:46]     "pilotErrorCode": 0,
[2025-11-24 01:17:46]     "pilotErrorDiag": "",
[2025-11-24 01:17:46]  *** Listing of results directory ***
[2025-11-24 01:17:46] total 1328772
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:24 pilot3.tar.gz
[2025-11-24 01:17:46] -rwx------. 1 boinc boinc     36292 Nov 18 17:26 runpilot2-wrapper.sh
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:26 queuedata.json
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc       100 Nov 22 23:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:17:46] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 23:29 run_atlas
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc       105 Nov 22 23:29 job.xml
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc      6391 Nov 22 23:29 init_data.xml
[2025-11-24 01:17:46] -rw-r--r--. 2 boinc boinc 410524997 Nov 22 23:29 EVNT.47493065._000350.pool.root.1
[2025-11-24 01:17:46] -rw-r--r--. 2 boinc boinc     15120 Nov 22 23:29 start_atlas.sh
[2025-11-24 01:17:46] drwxrwx--x. 2 boinc boinc        68 Nov 22 23:29 shared
[2025-11-24 01:17:46] -rw-r--r--. 2 boinc boinc    590097 Nov 22 23:29 input.tar.gz
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc         0 Nov 22 23:29 boinc_lockfile
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc      2773 Nov 22 23:30 pandaJob.out
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc    989784 Nov 22 23:33 agis_schedconf.cvmfs.json
[2025-11-24 01:17:46] drwx------. 5 boinc boinc      4096 Nov 22 23:33 pilot3
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc       533 Nov 24 00:43 boinc_task_state.xml
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc 916450840 Nov 24 01:13 HITS.47493068._003493.pool.root.1
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc      1031 Nov 24 01:14 memory_monitor_summary.json
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc   1526164 Nov 24 01:15 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc   2560243 Nov 24 01:15 log.47493068._003493.job.log.tgz.1
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc      8630 Nov 24 01:16 heartbeat.json
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc      8192 Nov 24 01:17 boinc_mmap_file
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc        29 Nov 24 01:17 wrapper_checkpoint.txt
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc        95 Nov 24 01:17 pilot_heartbeat.json
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc      4885 Nov 24 01:17 pilotlog.txt
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc  12327977 Nov 24 01:17 log.47493068._003493.job.log.1
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc       353 Nov 24 01:17 output.list
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc       620 Nov 24 01:17 runtime_log
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc  14909440 Nov 24 01:17 result.tar.gz
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc      8717 Nov 24 01:17 runtime_log.err
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc       662 Nov 24 01:17 jARNDmIidf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmInFKDm3BwLpm.diag
[2025-11-24 01:17:46] -rw-r--r--. 1 boinc boinc     21529 Nov 24 01:17 stderr.txt
[2025-11-24 01:17:46] HITS file was successfully produced:
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc 916450840 Nov 24 01:13 shared/HITS.pool.root.1
[2025-11-24 01:17:46]  *** Contents of shared directory: ***
[2025-11-24 01:17:46] total 1311032
[2025-11-24 01:17:46] -rw-r--r--. 2 boinc boinc 410524997 Nov 22 23:29 ATLAS.root_0
[2025-11-24 01:17:46] -rw-r--r--. 2 boinc boinc     15120 Nov 22 23:29 start_atlas.sh
[2025-11-24 01:17:46] -rw-r--r--. 2 boinc boinc    590097 Nov 22 23:29 input.tar.gz
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc 916450840 Nov 24 01:13 HITS.pool.root.1
[2025-11-24 01:17:46] -rw-------. 1 boinc boinc  14909440 Nov 24 01:17 result.tar.gz
01:17:48 (19749): run_atlas exited; CPU time 339619.872374
01:17:48 (19749): called boinc_finish(0)

</stderr_txt>
]]>

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