Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:59:33 (4091563): wrapper (7.7.26015): starting
20:59:33 (4091563): wrapper: running run_atlas (--nthreads 3)
[2025-11-19 20:59:33] Arguments: --nthreads 3
[2025-11-19 20:59:33] Threads: 3
[2025-11-19 20:59:33] Checking for CVMFS
[2025-11-19 20:59:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 20:59:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 20:59:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 20:59:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 20:59:34] 2.9.2.0 4099368 1540 78696 153055 0 88 34337197 36864000 0 130560 0 12566219 99.988 189075 4284 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-19 20:59:34] CVMFS is ok
[2025-11-19 20:59:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 20:59:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 20:59:34] Further information can be found at the LHC@home message board.
[2025-11-19 20:59:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 20:59:34] Checking for apptainer binary...
[2025-11-19 20:59:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 20:59:34] Running /usr/bin/apptainer --version
[2025-11-19 20:59:34] apptainer version 1.4.1-1.1
[2025-11-19 20:59:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 20:59:34] thA335
[2025-11-19 20:59:34] apptainer works
[2025-11-19 20:59:34] Set ATHENA_PROC_NUMBER=3
[2025-11-19 20:59:34] Set ATHENA_CORE_NUMBER=3
[2025-11-19 20:59:34] Starting ATLAS job with PandaID=6891584302
[2025-11-19 20:59:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 21:03:51]  *** The last 200 lines of the pilot log: ***
[2025-11-19 21:03:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 21:03:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 21:03:51] 
[2025-11-19 21:03:51] 2025-11-19 20:02:59,532 | INFO     | ***************************************
[2025-11-19 21:03:51] 2025-11-19 20:03:00,034 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-19 21:03:51] 2025-11-19 20:03:00,045 | INFO     | sufficient remaining disk space (827306541056 B)
[2025-11-19 21:03:51] 2025-11-19 20:03:00,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 21:03:51] 2025-11-19 20:03:00,045 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 21:03:51] 2025-11-19 20:03:00,045 | INFO     | update_server=False
[2025-11-19 21:03:51] 2025-11-19 20:03:00,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 21:03:51] 2025-11-19 20:03:00,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 21:03:51] 2025-11-19 20:03:00,045 | INFO     | aborting loop
[2025-11-19 21:03:51] 2025-11-19 20:03:00,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 21:03:51] 2025-11-19 20:03:00,286 | INFO     | all job control threads have been joined
[2025-11-19 21:03:51] 2025-11-19 20:03:00,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 21:03:51] 2025-11-19 20:03:01,051 | INFO     | [job] retrieve thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:01,051 | INFO     | [job] job monitor thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:01,052 | INFO     | [job] queue monitor thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:01,089 | INFO     | all data control threads have been joined
[2025-11-19 21:03:51] 2025-11-19 20:03:01,236 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:01,292 | INFO     | [job] control thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:01,462 | INFO     | all payload control threads have been joined
[2025-11-19 21:03:51] 2025-11-19 20:03:01,521 | INFO     | [data] copytool_in thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:01,865 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:02,005 | INFO     | [payload] validate_post thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:02,095 | INFO     | [data] control thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:02,424 | INFO     | [job] validate thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:02,468 | INFO     | [payload] control thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:02,501 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:02,549 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:02,581 | INFO     | [payload] failed_post thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:02,689 | INFO     | [data] copytool_out thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:03,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 21:03:51] 2025-11-19 20:03:07,066 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 21:03:51] 2025-11-19 20:03:30,583 | INFO     | PID=4095296 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-19 21:03:51] 2025-11-19 20:03:30,583 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 21:03:51] 2025-11-19 20:03:30,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 21:03:51] 2025-11-19 20:03:30,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 21:03:51] 2025-11-19 20:03:45,659 | INFO     | [monitor] cgroup control has ended
[2025-11-19 21:03:51] 2025-11-19 20:03:46,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671460849472)>', '<ExcThread(monitor, started 139670952322816)>']
[2025-11-19 21:03:51] 2025-11-19 20:03:47,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 21:03:51] 2025-11-19 20:03:47,673 | INFO     | [monitor] control thread has ended
[2025-11-19 21:03:51] 2025-11-19 20:03:51,856 | INFO     | all workflow threads have been joined
[2025-11-19 21:03:51] 2025-11-19 20:03:51,856 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 21:03:51] 2025-11-19 20:03:51,857 | INFO     | traces error code: 0
[2025-11-19 21:03:51] 2025-11-19 20:03:51,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 21:03:51] 2025-11-19 20:03:51,904 [wrapper] ==== pilot stdout END ====
[2025-11-19 21:03:51] 2025-11-19 20:03:51,908 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 21:03:51] 2025-11-19 20:03:51,911 [wrapper] pilotpid: 4095296
[2025-11-19 21:03:51] 2025-11-19 20:03:51,914 [wrapper] Pilot exit status: 0
[2025-11-19 21:03:51] 2025-11-19 20:03:51,921 [wrapper] pandaids: 6891584302
[2025-11-19 21:03:51] 2025-11-19 20:03:51,938 [wrapper] cleanup supervisor_pilot 4095302 4095297
[2025-11-19 21:03:51] 2025-11-19 20:03:51,941 [wrapper] Test setup, not cleaning
[2025-11-19 21:03:51] 2025-11-19 20:03:51,943 [wrapper] apfmon messages muted
[2025-11-19 21:03:51] 2025-11-19 20:03:51,946 [wrapper] ==== wrapper stdout END ====
[2025-11-19 21:03:51] 2025-11-19 20:03:51,949 [wrapper] ==== wrapper stderr END ====
[2025-11-19 21:03:51]  *** Error codes and diagnostics ***
[2025-11-19 21:03:51]     "exeErrorCode": 65,
[2025-11-19 21:03:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-19 21:03:51]     "pilotErrorCode": 1305,
[2025-11-19 21:03:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-19 21:03:51]  *** Listing of results directory ***
[2025-11-19 21:03:52] total 403440
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-19 21:03:52] -rwx------ 1 boinc boinc     36292 Nov 18 18:13 runpilot2-wrapper.sh
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:13 queuedata.json
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc       100 Nov 19 20:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 21:03:52] -rwxr-xr-x 1 boinc boinc      7986 Nov 19 20:59 run_atlas
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc       105 Nov 19 20:59 job.xml
[2025-11-19 21:03:52] -rw-r--r-- 2 boinc boinc 408918434 Nov 19 20:59 EVNT.47493065._000455.pool.root.1
[2025-11-19 21:03:52] -rw-r--r-- 2 boinc boinc    590096 Nov 19 20:59 input.tar.gz
[2025-11-19 21:03:52] -rw-r--r-- 2 boinc boinc     15120 Nov 19 20:59 start_atlas.sh
[2025-11-19 21:03:52] drwxrwx--x 2 boinc boinc      4096 Nov 19 20:59 shared
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc         0 Nov 19 20:59 boinc_setup_complete
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc      6194 Nov 19 20:59 init_data.xml
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc         0 Nov 19 20:59 boinc_lockfile
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc      2773 Nov 19 20:59 pandaJob.out
[2025-11-19 21:03:52] -rw------- 1 boinc boinc    989451 Nov 19 20:59 agis_schedconf.cvmfs.json
[2025-11-19 21:03:52] -rw------- 1 boinc boinc   1525063 Nov 19 20:59 agis_ddmendpoints.agis.ALL.json
[2025-11-19 21:03:52] drwx------ 5 boinc boinc      4096 Nov 19 20:59 pilot3
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc       522 Nov 19 21:00 boinc_task_state.xml
[2025-11-19 21:03:52] -rw------- 1 boinc boinc       958 Nov 19 21:00 memory_monitor_summary.json
[2025-11-19 21:03:52] -rw------- 1 boinc boinc     56026 Nov 19 21:00 log.47493068._004545.job.log.tgz.1
[2025-11-19 21:03:52] -rw------- 1 boinc boinc        95 Nov 19 21:02 pilot_heartbeat.json
[2025-11-19 21:03:52] -rw------- 1 boinc boinc      8401 Nov 19 21:02 heartbeat.json
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc      8192 Nov 19 21:03 boinc_mmap_file
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc        22 Nov 19 21:03 wrapper_checkpoint.txt
[2025-11-19 21:03:52] -rw------- 1 boinc boinc      4752 Nov 19 21:03 pilotlog.txt
[2025-11-19 21:03:52] -rw------- 1 boinc boinc     93199 Nov 19 21:03 log.47493068._004545.job.log.1
[2025-11-19 21:03:52] -rw------- 1 boinc boinc       186 Nov 19 21:03 output.list
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc       620 Nov 19 21:03 runtime_log
[2025-11-19 21:03:52] -rw------- 1 boinc boinc    174080 Nov 19 21:03 result.tar.gz
[2025-11-19 21:03:52] -rw------- 1 boinc boinc       649 Nov 19 21:03 rxbMDmASef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCYFKDmVGaW2n.diag
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc      8624 Nov 19 21:03 runtime_log.err
[2025-11-19 21:03:52] -rw-r--r-- 1 boinc boinc      8473 Nov 19 21:03 stderr.txt
[2025-11-19 21:03:52] No HITS result produced
[2025-11-19 21:03:52]  *** Contents of shared directory: ***
[2025-11-19 21:03:52] total 400108
[2025-11-19 21:03:52] -rw-r--r-- 2 boinc boinc 408918434 Nov 19 20:59 ATLAS.root_0
[2025-11-19 21:03:52] -rw-r--r-- 2 boinc boinc    590096 Nov 19 20:59 input.tar.gz
[2025-11-19 21:03:52] -rw-r--r-- 2 boinc boinc     15120 Nov 19 20:59 start_atlas.sh
[2025-11-19 21:03:52] -rw------- 1 boinc boinc    174080 Nov 19 21:03 result.tar.gz
21:03:54 (4091563): run_atlas exited; CPU time 31.616941
21:03:54 (4091563): called boinc_finish(0)

</stderr_txt>
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