Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:23:16 (30340): wrapper (7.7.26015): starting
18:23:16 (30340): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 18:23:16] Arguments: --nthreads 8
[2025-11-22 18:23:16] Threads: 8
[2025-11-22 18:23:16] Checking for CVMFS
[2025-11-22 18:23:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 18:23:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 18:23:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 18:23:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 18:23:19] 2.11.2.0 20606 76020 98240 153180 1 127 21731132 25165824 4296 130560 3 24273349 99.907 11301753 1976 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 18:23:19] CVMFS is ok
[2025-11-22 18:23:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 18:23:20] Checking for apptainer binary...
[2025-11-22 18:23:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 18:23:20] Running /usr/bin/apptainer --version
[2025-11-22 18:23:20] apptainer version 1.3.2-1.el7
[2025-11-22 18:23:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 18:23:31] cg-vwn476.simple-grid.lan
[2025-11-22 18:23:31] apptainer works
[2025-11-22 18:23:31] Set ATHENA_PROC_NUMBER=8
[2025-11-22 18:23:31] Set ATHENA_CORE_NUMBER=8
[2025-11-22 18:23:31] Starting ATLAS job with PandaID=6892526650
[2025-11-22 18:23:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:48:04]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:48:04] 2025-11-23 16:47:26,651 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 17:48:04] 2025-11-23 16:47:26,654 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-23 17:48:04] 2025-11-23 16:47:26,656 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6892526650/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 17:48:04] 2025-11-23 16:47:26,657 | INFO     | extracted standard info from prmon json
[2025-11-23 17:48:04] 2025-11-23 16:47:26,657 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 17:48:04] 2025-11-23 16:47:26,657 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 17:48:04] 2025-11-23 16:47:26,693 | INFO     | fitting pss+swap vs Time
[2025-11-23 17:48:04] 2025-11-23 16:47:26,696 | INFO     | sum of square deviations: 793848573438.1034
[2025-11-23 17:48:04] 2025-11-23 16:47:26,778 | INFO     | sum of deviations: 3675635910673.056
[2025-11-23 17:48:04] 2025-11-23 16:47:26,779 | INFO     | mean x: 1763874618.8033626
[2025-11-23 17:48:04] 2025-11-23 16:47:26,779 | INFO     | mean y: 2869795.1191520467
[2025-11-23 17:48:04] 2025-11-23 16:47:26,779 | INFO     | intersect: -8164129690.336114
[2025-11-23 17:48:04] 2025-11-23 16:47:26,781 | INFO     | chi2: 12.765604133326525
[2025-11-23 17:48:04] 2025-11-23 16:47:26,782 | INFO     | sum of square deviations: 785176433704.5796
[2025-11-23 17:48:04] 2025-11-23 16:47:26,852 | INFO     | sum of deviations: 4121002442635.2065
[2025-11-23 17:48:04] 2025-11-23 16:47:26,852 | INFO     | mean x: 1763874466.3081439
[2025-11-23 17:48:04] 2025-11-23 16:47:26,852 | INFO     | mean y: 2877627.909024211
[2025-11-23 17:48:04] 2025-11-23 16:47:26,852 | INFO     | intersect: -9254826337.888613
[2025-11-23 17:48:04] 2025-11-23 16:47:26,854 | INFO     | chi2: 9.818410590053578
[2025-11-23 17:48:04] 2025-11-23 16:47:26,854 | INFO     | current chi2=9.818410590053578 (change=23.086988382937992 %)
[2025-11-23 17:48:04] 2025-11-23 16:47:26,854 | INFO     | right removable region: 1362
[2025-11-23 17:48:04] 2025-11-23 16:47:26,856 | INFO     | sum of square deviations: 785175346074.5791
[2025-11-23 17:48:04] 2025-11-23 16:47:26,906 | INFO     | sum of deviations: 3107611037083.9595
[2025-11-23 17:48:04] 2025-11-23 16:47:26,907 | INFO     | mean x: 1763874771.3081439
[2025-11-23 17:48:04] 2025-11-23 16:47:26,907 | INFO     | mean y: 2879781.5715333824
[2025-11-23 17:48:04] 2025-11-23 16:47:26,907 | INFO     | intersect: -6978282750.791632
[2025-11-23 17:48:04] 2025-11-23 16:47:26,909 | INFO     | chi2: 8.222803199378887
[2025-11-23 17:48:04] 2025-11-23 16:47:26,909 | INFO     | current chi2=8.222803199378887 (change=35.586258875817514 %)
[2025-11-23 17:48:04] 2025-11-23 16:47:26,911 | INFO     | sum of square deviations: 776565515248.4916
[2025-11-23 17:48:04] 2025-11-23 16:47:26,962 | INFO     | sum of deviations: 2687831439411.712
[2025-11-23 17:48:04] 2025-11-23 16:47:26,963 | INFO     | mean x: 1763874923.8129601
[2025-11-23 17:48:04] 2025-11-23 16:47:26,963 | INFO     | mean y: 2887215.5736377025
[2025-11-23 17:48:04] 2025-11-23 16:47:26,963 | INFO     | intersect: -6102197780.245872
[2025-11-23 17:48:04] 2025-11-23 16:47:26,964 | INFO     | chi2: 5.865689802517755
[2025-11-23 17:48:04] 2025-11-23 16:47:26,965 | INFO     | current chi2=5.865689802517755 (change=28.66556987572289 %)
[2025-11-23 17:48:04] 2025-11-23 16:47:26,966 | INFO     | sum of square deviations: 768019179511.8717
[2025-11-23 17:48:04] 2025-11-23 16:47:27,018 | INFO     | sum of deviations: 2550204110814.787
[2025-11-23 17:48:04] 2025-11-23 16:47:27,019 | INFO     | mean x: 1763875076.3148558
[2025-11-23 17:48:04] 2025-11-23 16:47:27,019 | INFO     | mean y: 2889669.164818921
[2025-11-23 17:48:04] 2025-11-23 16:47:27,019 | INFO     | intersect: -5854049311.76119
[2025-11-23 17:48:04] 2025-11-23 16:47:27,020 | INFO     | chi2: 5.598123047869606
[2025-11-23 17:48:04] 2025-11-23 16:47:27,020 | INFO     | current chi2=5.598123047869606 (change=4.561556503265822 %)
[2025-11-23 17:48:04] 2025-11-23 16:47:27,021 | INFO     | left removable region: 30
[2025-11-23 17:48:04] 2025-11-23 16:47:27,022 | INFO     | sum of square deviations: 732810794699.3953
[2025-11-23 17:48:04] 2025-11-23 16:47:27,072 | INFO     | sum of deviations: 2899580062955.309
[2025-11-23 17:48:04] 2025-11-23 16:47:27,072 | INFO     | mean x: 1763875350.8190691
[2025-11-23 17:48:04] 2025-11-23 16:47:27,072 | INFO     | mean y: 2902763.8145645647
[2025-11-23 17:48:04] 2025-11-23 16:47:27,072 | INFO     | intersect: -6976385529.6545315
[2025-11-23 17:48:04] 2025-11-23 16:47:27,074 | INFO     | chi2: 1.9256561150065687
[2025-11-23 17:48:04] 2025-11-23 16:47:27,074 | INFO     | current memory leak: 3.96 B/s (using 1332 data points, chi2=1.93)
[2025-11-23 17:48:04] 2025-11-23 16:47:27,096 | INFO     | could have reported an average CPU frequency of 2249 MHz (47 samples)
[2025-11-23 17:48:04] 2025-11-23 16:47:27,097 | INFO     | ..............................
[2025-11-23 17:48:04] 2025-11-23 16:47:27,097 | INFO     | . Timing measurements:
[2025-11-23 17:48:04] 2025-11-23 16:47:27,097 | INFO     | . get job = 0 s
[2025-11-23 17:48:04] 2025-11-23 16:47:27,097 | INFO     | . initial setup = 10 s
[2025-11-23 17:48:04] 2025-11-23 16:47:27,097 | INFO     | . payload setup = 145 s
[2025-11-23 17:48:04] 2025-11-23 16:47:27,097 | INFO     | . stage-in = 0 s
[2025-11-23 17:48:04] 2025-11-23 16:47:27,097 | INFO     | . payload execution = 83587 s
[2025-11-23 17:48:04] 2025-11-23 16:47:27,097 | INFO     | . stage-out = 5 s
[2025-11-23 17:48:04] 2025-11-23 16:47:27,097 | INFO     | . log creation = 1 s
[2025-11-23 17:48:04] 2025-11-23 16:47:27,097 | INFO     | ..............................
[2025-11-23 17:48:04] 2025-11-23 16:47:27,261 | INFO     | 
[2025-11-23 17:48:04] 2025-11-23 16:47:27,261 | INFO     | job summary report
[2025-11-23 17:48:04] 2025-11-23 16:47:27,262 | INFO     | --------------------------------------------------
[2025-11-23 17:48:04] 2025-11-23 16:47:27,262 | INFO     | PanDA job id: 6892526650
[2025-11-23 17:48:04] 2025-11-23 16:47:27,262 | INFO     | task id: 47493029
[2025-11-23 17:48:04] 2025-11-23 16:47:27,262 | INFO     | errors: (none)
[2025-11-23 17:48:04] 2025-11-23 16:47:27,262 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 17:48:04] 2025-11-23 16:47:27,262 | INFO     | pilot state: finished 
[2025-11-23 17:48:04] 2025-11-23 16:47:27,262 | INFO     | transexitcode: 0
[2025-11-23 17:48:04] 2025-11-23 16:47:27,262 | INFO     | exeerrorcode: 0
[2025-11-23 17:48:04] 2025-11-23 16:47:27,262 | INFO     | exeerrordiag: 
[2025-11-23 17:48:04] 2025-11-23 16:47:27,262 | INFO     | exitcode: 0
[2025-11-23 17:48:04] 2025-11-23 16:47:27,262 | INFO     | exitmsg: OK
[2025-11-23 17:48:04] 2025-11-23 16:47:27,262 | INFO     | cpuconsumptiontime: 308122 s
[2025-11-23 17:48:04] 2025-11-23 16:47:27,263 | INFO     | nevents: 1000
[2025-11-23 17:48:04] 2025-11-23 16:47:27,263 | INFO     | neventsw: 0
[2025-11-23 17:48:04] 2025-11-23 16:47:27,263 | INFO     | pid: 8419
[2025-11-23 17:48:04] 2025-11-23 16:47:27,263 | INFO     | pgrp: 8419
[2025-11-23 17:48:04] 2025-11-23 16:47:27,263 | INFO     | corecount: 8
[2025-11-23 17:48:04] 2025-11-23 16:47:27,269 | INFO     | event service: False
[2025-11-23 17:48:04] 2025-11-23 16:47:27,269 | INFO     | sizes: {0: 2297962, 1: 2298648, 2: 2298847, 13: 2298847, 23: 2298903, 34: 2298931, 45: 2299087, 55: 2299115, 66: 2299143, 77: 2299171, 88: 2299227, 96: 2299797, 98
[2025-11-23 17:48:04] 2025-11-23 16:47:27,270 | INFO     | --------------------------------------------------
[2025-11-23 17:48:04] 2025-11-23 16:47:27,270 | INFO     | 
[2025-11-23 17:48:04] 2025-11-23 16:47:27,270 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-23 17:48:04] 2025-11-23 16:47:27,502 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,502 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,502 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,502 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,502 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,504 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 17:48:04] 2025-11-23 16:47:27,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,504 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 17:48:04] 2025-11-23 16:47:27,504 | INFO     | job 6892526650 has completed (purged errors)
[2025-11-23 17:48:04] 2025-11-23 16:47:27,504 | INFO     | overall cleanup function is called
[2025-11-23 17:48:04] 2025-11-23 16:47:28,529 | INFO     | --- collectZombieJob: --- 10, [8419]
[2025-11-23 17:48:04] 2025-11-23 16:47:28,529 | INFO     | zombie collector waiting for pid 8419
[2025-11-23 17:48:04] 2025-11-23 16:47:28,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 17:48:04] 2025-11-23 16:47:28,530 | INFO     | collected zombie processes
[2025-11-23 17:48:04] 2025-11-23 16:47:28,530 | INFO     | will attempt to kill all subprocesses of pid=8419
[2025-11-23 17:48:04] 2025-11-23 16:47:28,642 | INFO     | process IDs to be killed: [8419] (in reverse order)
[2025-11-23 17:48:04] 2025-11-23 16:47:29,535 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 17:48:04] 2025-11-23 16:47:29,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 17:48:04] 2025-11-23 16:47:29,538 | INFO     | did not find any defunct processes belonging to 8419
[2025-11-23 17:48:04] 2025-11-23 16:47:29,541 | INFO     | did not find any defunct processes belonging to 8419
[2025-11-23 17:48:04] 2025-11-23 16:47:29,627 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 17:48:04] 2025-11-23 16:47:29,628 | INFO     | ready for new job
[2025-11-23 17:48:04] 2025-11-23 16:47:29,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 17:48:04] 2025-11-23 16:47:29,634 | INFO     | ***************************************
[2025-11-23 17:48:04] 2025-11-23 16:47:29,634 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 17:48:04] 2025-11-23 16:47:29,634 | INFO     | ***************************************
[2025-11-23 17:48:04] 2025-11-23 16:47:29,634 | INFO     | 
[2025-11-23 17:48:04] 2025-11-23 16:47:29,635 | INFO     | pilot is running in a VM
[2025-11-23 17:48:04] 2025-11-23 16:47:29,635 | INFO     | architecture information:
[2025-11-23 17:48:04] 2025-11-23 16:47:29,651 | INFO     | executing command: cat /etc/os-release
[2025-11-23 17:48:04] 2025-11-23 16:47:29,955 | INFO     | cat /etc/os-release:
[2025-11-23 17:48:04] NAME="CentOS Linux"
[2025-11-23 17:48:04] VERSION="7 (Core)"
[2025-11-23 17:48:04] ID="centos"
[2025-11-23 17:48:04] ID_LIKE="rhel fedora"
[2025-11-23 17:48:04] VERSION_ID="7"
[2025-11-23 17:48:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 17:48:04] ANSI_COLOR="0;31"
[2025-11-23 17:48:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 17:48:04] HOME_URL="https://www.centos.org/"
[2025-11-23 17:48:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 17:48:04] 
[2025-11-23 17:48:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 17:48:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 17:48:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 17:48:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:48:04] 
[2025-11-23 17:48:04] 2025-11-23 16:47:29,955 | INFO     | ***************************************
[2025-11-23 17:48:04] 2025-11-23 16:47:30,458 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-23 17:48:04] 2025-11-23 16:47:30,706 | INFO     | sufficient remaining disk space (492852740096 B)
[2025-11-23 17:48:04] 2025-11-23 16:47:30,706 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:48:04] 2025-11-23 16:47:30,707 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:48:04] 2025-11-23 16:47:30,707 | INFO     | update_server=False
[2025-11-23 17:48:04] 2025-11-23 16:47:30,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:48:04] 2025-11-23 16:47:30,893 | INFO     | all job control threads have been joined
[2025-11-23 17:48:04] 2025-11-23 16:47:30,966 | INFO     | all payload control threads have been joined
[2025-11-23 17:48:04] 2025-11-23 16:47:31,188 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 17:48:04] 2025-11-23 16:47:31,188 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 17:48:04] 2025-11-23 16:47:31,189 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:48:04] 2025-11-23 16:47:31,189 | INFO     | will abort loop
[2025-11-23 17:48:04] 2025-11-23 16:47:31,461 | INFO     | all data control threads have been joined
[2025-11-23 17:48:04] 2025-11-23 16:47:31,712 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:31,727 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:31,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:48:04] 2025-11-23 16:47:31,898 | INFO     | [job] control thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:31,972 | INFO     | [payload] control thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:31,990 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:48:04] 2025-11-23 16:47:32,194 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:32,253 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:32,264 | INFO     | [job] validate thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:32,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:48:04] 2025-11-23 16:47:32,277 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:32,467 | INFO     | [data] control thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:32,557 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:32,588 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:32,871 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:32,915 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:33,280 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:33,997 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:35,779 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:48:04] 2025-11-23 16:47:52,197 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:48:04] 2025-11-23 16:47:52,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140221483525952)>', '<ExcThread(monitor, started 140221169506048)>']
[2025-11-23 17:48:04] 2025-11-23 16:47:57,726 | INFO     | all workflow threads have been joined
[2025-11-23 17:48:04] 2025-11-23 16:47:57,726 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:48:04] 2025-11-23 16:47:57,727 | INFO     | traces error code: 0
[2025-11-23 17:48:04] 2025-11-23 16:47:57,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:48:04] 2025-11-23 16:47:59,734 | INFO     | PID=1781 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 17:48:04] 2025-11-23 16:47:59,735 | INFO     | .. there are 9 such processes running
[2025-11-23 17:48:04] 2025-11-23 16:47:59,735 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:48:04] 2025-11-23 16:47:59,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:48:04] 2025-11-23 16:47:59,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:48:04] 2025-11-23 16:47:59,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:48:04] 2025-11-23 16:47:59,735 | INFO     | [monitor] control thread has ended
[2025-11-23 17:48:04] 2025-11-23 16:47:59,964 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:48:04] 2025-11-23 16:48:00,016 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:48:04] 2025-11-23 16:48:00,111 [wrapper] pilotpid: 1781
[2025-11-23 17:48:04] 2025-11-23 16:48:00,144 [wrapper] Pilot exit status: 0
[2025-11-23 17:48:04] 2025-11-23 16:48:00,398 [wrapper] pandaids: 6892526650
[2025-11-23 17:48:04] 2025-11-23 16:48:00,992 [wrapper] cleanup supervisor_pilot 28873 1782
[2025-11-23 17:48:04] 2025-11-23 16:48:01,123 [wrapper] Test setup, not cleaning
[2025-11-23 17:48:04] 2025-11-23 16:48:01,219 [wrapper] apfmon messages muted
[2025-11-23 17:48:04] 2025-11-23 16:48:01,305 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:48:04] 2025-11-23 16:48:01,429 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:48:04]  *** Error codes and diagnostics ***
[2025-11-23 17:48:04]     "exeErrorCode": 0,
[2025-11-23 17:48:04]     "exeErrorDiag": "",
[2025-11-23 17:48:04]     "pilotErrorCode": 0,
[2025-11-23 17:48:04]     "pilotErrorDiag": "",
[2025-11-23 17:48:04]  *** Listing of results directory ***
[2025-11-23 17:48:04] total 1338348
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc      5112 Nov 19 08:07 queuedata.json
[2025-11-23 17:48:04] -rwx------. 1 boinc boinc     36292 Nov 19 08:07 runpilot2-wrapper.sh
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc       100 Nov 22 18:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:48:04] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 18:23 run_atlas
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc       105 Nov 22 18:23 job.xml
[2025-11-23 17:48:04] -rw-r--r--. 2 boinc boinc 410734900 Nov 22 18:23 EVNT.47493027._000116.pool.root.1
[2025-11-23 17:48:04] -rw-r--r--. 2 boinc boinc     15120 Nov 22 18:23 start_atlas.sh
[2025-11-23 17:48:04] drwxrwx--x. 2 boinc boinc        68 Nov 22 18:23 shared
[2025-11-23 17:48:04] -rw-r--r--. 2 boinc boinc    590092 Nov 22 18:23 input.tar.gz
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc      6393 Nov 22 18:23 init_data.xml
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc         0 Nov 22 18:23 boinc_lockfile
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc      2770 Nov 22 18:23 pandaJob.out
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc    989776 Nov 22 18:27 agis_schedconf.cvmfs.json
[2025-11-23 17:48:04] drwx------. 5 boinc boinc      4096 Nov 22 18:27 pilot3
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc       533 Nov 23 17:29 boinc_task_state.xml
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc 928479095 Nov 23 17:45 HITS.47493029._001111.pool.root.1
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc      1031 Nov 23 17:45 memory_monitor_summary.json
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc   1526164 Nov 23 17:46 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc   2463904 Nov 23 17:46 log.47493029._001111.job.log.tgz.1
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc        95 Nov 23 17:47 pilot_heartbeat.json
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc      8624 Nov 23 17:47 heartbeat.json
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc       819 Nov 23 17:47 pilotlog.txt
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc  11207102 Nov 23 17:48 log.47493029._001111.job.log.1
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc       353 Nov 23 17:48 output.list
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc       620 Nov 23 17:48 runtime_log
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc  13690880 Nov 23 17:48 result.tar.gz
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc      8192 Nov 23 17:48 boinc_mmap_file
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc        29 Nov 23 17:48 wrapper_checkpoint.txt
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc      8717 Nov 23 17:48 runtime_log.err
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc       662 Nov 23 17:48 6QOKDmKTrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOgGKDma15Pmm.diag
[2025-11-23 17:48:04] -rw-r--r--. 1 boinc boinc     20971 Nov 23 17:48 stderr.txt
[2025-11-23 17:48:04] HITS file was successfully produced:
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc 928479095 Nov 23 17:45 shared/HITS.pool.root.1
[2025-11-23 17:48:04]  *** Contents of shared directory: ***
[2025-11-23 17:48:04] total 1321800
[2025-11-23 17:48:04] -rw-r--r--. 2 boinc boinc 410734900 Nov 22 18:23 ATLAS.root_0
[2025-11-23 17:48:04] -rw-r--r--. 2 boinc boinc     15120 Nov 22 18:23 start_atlas.sh
[2025-11-23 17:48:04] -rw-r--r--. 2 boinc boinc    590092 Nov 22 18:23 input.tar.gz
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc 928479095 Nov 23 17:45 HITS.pool.root.1
[2025-11-23 17:48:04] -rw-------. 1 boinc boinc  13690880 Nov 23 17:48 result.tar.gz
17:48:05 (30340): run_atlas exited; CPU time 308533.920384
17:48:05 (30340): called boinc_finish(0)

</stderr_txt>
]]>

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