Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:59:01 (498199): wrapper (7.7.26015): starting
03:59:01 (498199): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 03:59:01] Arguments: --nthreads 4
[2025-11-23 03:59:01] Threads: 4
[2025-11-23 03:59:01] Checking for CVMFS
[2025-11-23 03:59:01] No cvmfs_config command found, will try listing directly
[2025-11-23 03:59:01] CVMFS is ok
[2025-11-23 03:59:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 03:59:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 03:59:01] Further information can be found at the LHC@home message board.
[2025-11-23 03:59:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 03:59:01] Checking for apptainer binary...
[2025-11-23 03:59:01] which: no apptainer in ((null))
[2025-11-23 03:59:01] apptainer is not installed, using version from CVMFS
[2025-11-23 03:59:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 03:59:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-11-23 03:59:01] apptainer works
[2025-11-23 03:59:01] Set ATHENA_PROC_NUMBER=4
[2025-11-23 03:59:01] Set ATHENA_CORE_NUMBER=4
[2025-11-23 03:59:01] Starting ATLAS job with PandaID=6892549354
[2025-11-23 03:59:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 18:53:03]  *** The last 200 lines of the pilot log: ***
[2025-11-23 18:53:03] 2025-11-23 17:43:30,727 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 18:53:03] 2025-11-23 17:43:30,736 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2778.560437500001
[2025-11-23 18:53:03] 2025-11-23 17:43:30,748 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6892549354/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 18:53:03] 2025-11-23 17:43:30,748 | INFO     | extracted standard info from prmon json
[2025-11-23 18:53:03] 2025-11-23 17:43:30,748 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 18:53:03] 2025-11-23 17:43:30,748 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 18:53:03] 2025-11-23 17:43:30,762 | INFO     | fitting pss+swap vs Time
[2025-11-23 18:53:03] 2025-11-23 17:43:30,764 | INFO     | sum of square deviations: 204190535477.5
[2025-11-23 18:53:03] 2025-11-23 17:43:30,778 | INFO     | sum of deviations: 589792513529.9995
[2025-11-23 18:53:03] 2025-11-23 17:43:30,779 | INFO     | mean x: 1763893281.5
[2025-11-23 18:53:03] 2025-11-23 17:43:30,779 | INFO     | mean y: 2271611.9264367814
[2025-11-23 18:53:03] 2025-11-23 17:43:30,779 | INFO     | intersect: -5092631781.425012
[2025-11-23 18:53:03] 2025-11-23 17:43:30,780 | INFO     | chi2: 4.4446368314864495
[2025-11-23 18:53:03] 2025-11-23 17:43:30,781 | INFO     | sum of square deviations: 200690200080.0
[2025-11-23 18:53:03] 2025-11-23 17:43:30,796 | INFO     | sum of deviations: 782977263850.0005
[2025-11-23 18:53:03] 2025-11-23 17:43:30,796 | INFO     | mean x: 1763893129.0
[2025-11-23 18:53:03] 2025-11-23 17:43:30,796 | INFO     | mean y: 2280023.2462427747
[2025-11-23 18:53:03] 2025-11-23 17:43:30,796 | INFO     | intersect: -6879412333.020782
[2025-11-23 18:53:03] 2025-11-23 17:43:30,797 | INFO     | chi2: 2.1562635080618064
[2025-11-23 18:53:03] 2025-11-23 17:43:30,798 | INFO     | current chi2=2.1562635080618064 (change=51.4861710908184 %)
[2025-11-23 18:53:03] 2025-11-23 17:43:30,799 | INFO     | sum of square deviations: 197230097995.0
[2025-11-23 18:53:03] 2025-11-23 17:43:30,813 | INFO     | sum of deviations: 844130174928.9999
[2025-11-23 18:53:03] 2025-11-23 17:43:30,813 | INFO     | mean x: 1763892976.5
[2025-11-23 18:53:03] 2025-11-23 17:43:30,813 | INFO     | mean y: 2282717.462790698
[2025-11-23 18:53:03] 2025-11-23 17:43:30,814 | INFO     | intersect: -7547048251.519064
[2025-11-23 18:53:03] 2025-11-23 17:43:30,815 | INFO     | chi2: 1.8689188946119988
[2025-11-23 18:53:03] 2025-11-23 17:43:30,815 | INFO     | current chi2=1.8689188946119988 (change=13.326043518126973 %)
[2025-11-23 18:53:03] 2025-11-23 17:43:30,815 | INFO     | right removable region: 859
[2025-11-23 18:53:03] 2025-11-23 17:43:30,816 | INFO     | sum of square deviations: 200690200080.0
[2025-11-23 18:53:03] 2025-11-23 17:43:30,830 | INFO     | sum of deviations: 434788780974.0
[2025-11-23 18:53:03] 2025-11-23 17:43:30,831 | INFO     | mean x: 1763893434.0
[2025-11-23 18:53:03] 2025-11-23 17:43:30,831 | INFO     | mean y: 2278352.165317919
[2025-11-23 18:53:03] 2025-11-23 17:43:30,831 | INFO     | intersect: -3819139313.625983
[2025-11-23 18:53:03] 2025-11-23 17:43:30,832 | INFO     | chi2: 2.7142813845350515
[2025-11-23 18:53:03] 2025-11-23 17:43:30,832 | INFO     | current chi2=2.7142813845350515 (change=38.931312333401685 %)
[2025-11-23 18:53:03] 2025-11-23 17:43:30,833 | INFO     | sum of square deviations: 197230097995.0
[2025-11-23 18:53:03] 2025-11-23 17:43:30,848 | INFO     | sum of deviations: 407075488412.49976
[2025-11-23 18:53:03] 2025-11-23 17:43:30,848 | INFO     | mean x: 1763893586.5
[2025-11-23 18:53:03] 2025-11-23 17:43:30,848 | INFO     | mean y: 2279573.015116279
[2025-11-23 18:53:03] 2025-11-23 17:43:30,848 | INFO     | intersect: -3638330306.1645126
[2025-11-23 18:53:03] 2025-11-23 17:43:30,849 | INFO     | chi2: 2.6930245060819393
[2025-11-23 18:53:03] 2025-11-23 17:43:30,849 | INFO     | current chi2=2.6930245060819393 (change=0.7831494027931608 %)
[2025-11-23 18:53:03] 2025-11-23 17:43:30,850 | INFO     | left removable region: 20
[2025-11-23 18:53:03] 2025-11-23 17:43:30,851 | INFO     | sum of square deviations: 183131768540.0
[2025-11-23 18:53:03] 2025-11-23 17:43:30,864 | INFO     | sum of deviations: 609285264952.0001
[2025-11-23 18:53:03] 2025-11-23 17:43:30,865 | INFO     | mean x: 1763893556.0
[2025-11-23 18:53:03] 2025-11-23 17:43:30,865 | INFO     | mean y: 2293132.576877235
[2025-11-23 18:53:03] 2025-11-23 17:43:30,865 | INFO     | intersect: -5866237276.879876
[2025-11-23 18:53:03] 2025-11-23 17:43:30,866 | INFO     | chi2: 0.08642626736309358
[2025-11-23 18:53:03] 2025-11-23 17:43:30,866 | INFO     | current memory leak: 3.33 B/s (using 839 data points, chi2=0.09)
[2025-11-23 18:53:03] 2025-11-23 17:43:30,867 | INFO     | could have reported an average CPU frequency of 2776 MHz (33 samples)
[2025-11-23 18:53:03] 2025-11-23 17:43:30,867 | INFO     | ..............................
[2025-11-23 18:53:03] 2025-11-23 17:43:30,868 | INFO     | . Timing measurements:
[2025-11-23 18:53:03] 2025-11-23 17:43:30,868 | INFO     | . get job = 0 s
[2025-11-23 18:53:03] 2025-11-23 17:43:30,868 | INFO     | . initial setup = 1 s
[2025-11-23 18:53:03] 2025-11-23 17:43:30,868 | INFO     | . payload setup = 5 s
[2025-11-23 18:53:03] 2025-11-23 17:43:30,868 | INFO     | . stage-in = 0 s
[2025-11-23 18:53:03] 2025-11-23 17:43:30,868 | INFO     | . payload execution = 53025 s
[2025-11-23 18:53:03] 2025-11-23 17:43:30,868 | INFO     | . stage-out = 2 s
[2025-11-23 18:53:03] 2025-11-23 17:43:30,868 | INFO     | . log creation = 0 s
[2025-11-23 18:53:03] 2025-11-23 17:43:30,868 | INFO     | ..............................
[2025-11-23 18:53:03] 2025-11-23 17:43:31,449 | INFO     | 
[2025-11-23 18:53:03] 2025-11-23 17:43:31,449 | INFO     | job summary report
[2025-11-23 18:53:03] 2025-11-23 17:43:31,449 | INFO     | --------------------------------------------------
[2025-11-23 18:53:03] 2025-11-23 17:43:31,449 | INFO     | PanDA job id: 6892549354
[2025-11-23 18:53:03] 2025-11-23 17:43:31,449 | INFO     | task id: 47493029
[2025-11-23 18:53:03] 2025-11-23 17:43:31,449 | INFO     | errors: (none)
[2025-11-23 18:53:03] 2025-11-23 17:43:31,449 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 18:53:03] 2025-11-23 17:43:31,449 | INFO     | pilot state: finished 
[2025-11-23 18:53:03] 2025-11-23 17:43:31,449 | INFO     | transexitcode: 0
[2025-11-23 18:53:03] 2025-11-23 17:43:31,449 | INFO     | exeerrorcode: 0
[2025-11-23 18:53:03] 2025-11-23 17:43:31,449 | INFO     | exeerrordiag: 
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | exitcode: 0
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | exitmsg: OK
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | cpuconsumptiontime: 209873 s
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | nevents: 1000
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | neventsw: 0
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | pid: 509015
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | pgrp: 509015
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | corecount: 4
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | event service: False
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | sizes: {0: 2298750, 4: 2299012, 11: 2299040, 53035: 2348154, 53038: 2357170, 53039: 2357226, 53044: 2357664}
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | --------------------------------------------------
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | 
[2025-11-23 18:53:03] 2025-11-23 17:43:31,450 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-11-23 18:53:03] 2025-11-23 17:43:31,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,473 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,473 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,473 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 18:53:03] 2025-11-23 17:43:31,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,474 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 18:53:03] 2025-11-23 17:43:31,474 | INFO     | job 6892549354 has completed (purged errors)
[2025-11-23 18:53:03] 2025-11-23 17:43:31,474 | INFO     | overall cleanup function is called
[2025-11-23 18:53:03] 2025-11-23 17:43:32,488 | INFO     | --- collectZombieJob: --- 10, [509015]
[2025-11-23 18:53:03] 2025-11-23 17:43:32,488 | INFO     | zombie collector waiting for pid 509015
[2025-11-23 18:53:03] 2025-11-23 17:43:32,488 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 18:53:03] 2025-11-23 17:43:32,488 | INFO     | collected zombie processes
[2025-11-23 18:53:03] 2025-11-23 17:43:32,488 | INFO     | will attempt to kill all subprocesses of pid=509015
[2025-11-23 18:53:03] 2025-11-23 17:43:32,854 | INFO     | process IDs to be killed: [509015] (in reverse order)
[2025-11-23 18:53:03] 2025-11-23 17:43:32,962 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 18:53:03] 2025-11-23 17:43:32,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 18:53:03] 2025-11-23 17:43:32,978 | INFO     | did not find any defunct processes belonging to 509015
[2025-11-23 18:53:03] 2025-11-23 17:43:32,991 | INFO     | did not find any defunct processes belonging to 509015
[2025-11-23 18:53:03] 2025-11-23 17:43:32,992 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 18:53:03] 2025-11-23 17:43:32,993 | INFO     | ready for new job
[2025-11-23 18:53:03] 2025-11-23 17:43:32,993 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 18:53:03] 2025-11-23 17:43:32,998 | INFO     | ***************************************
[2025-11-23 18:53:03] 2025-11-23 17:43:32,998 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 18:53:03] 2025-11-23 17:43:32,998 | INFO     | ***************************************
[2025-11-23 18:53:03] 2025-11-23 17:43:32,998 | INFO     | 
[2025-11-23 18:53:03] 2025-11-23 17:43:33,003 | INFO     | architecture information:
[2025-11-23 18:53:03] 2025-11-23 17:43:33,003 | INFO     | executing command: cat /etc/os-release
[2025-11-23 18:53:03] 2025-11-23 17:43:33,019 | INFO     | cat /etc/os-release:
[2025-11-23 18:53:03] NAME="CentOS Linux"
[2025-11-23 18:53:03] VERSION="7 (Core)"
[2025-11-23 18:53:03] ID="centos"
[2025-11-23 18:53:03] ID_LIKE="rhel fedora"
[2025-11-23 18:53:03] VERSION_ID="7"
[2025-11-23 18:53:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 18:53:03] ANSI_COLOR="0;31"
[2025-11-23 18:53:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 18:53:03] HOME_URL="https://www.centos.org/"
[2025-11-23 18:53:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 18:53:03] 
[2025-11-23 18:53:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 18:53:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 18:53:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 18:53:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 18:53:03] 
[2025-11-23 18:53:03] 2025-11-23 17:43:33,020 | INFO     | ***************************************
[2025-11-23 18:53:03] 2025-11-23 17:43:33,522 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-11-23 18:53:03] 2025-11-23 17:43:33,539 | INFO     | sufficient remaining disk space (662062497792 B)
[2025-11-23 18:53:03] 2025-11-23 17:43:33,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 18:53:03] 2025-11-23 17:43:33,540 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 18:53:03] 2025-11-23 17:43:33,540 | INFO     | update_server=False
[2025-11-23 18:53:03] 2025-11-23 17:43:33,540 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 18:53:03] 2025-11-23 17:43:33,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 18:53:03] 2025-11-23 17:43:33,970 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 18:53:03] 2025-11-23 17:43:33,970 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 18:53:03] 2025-11-23 17:43:33,971 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 18:53:03] 2025-11-23 17:43:33,971 | INFO     | will abort loop
[2025-11-23 18:53:03] 2025-11-23 17:43:34,113 | INFO     | all payload control threads have been joined
[2025-11-23 18:53:03] 2025-11-23 17:43:34,167 | INFO     | all job control threads have been joined
[2025-11-23 18:53:03] 2025-11-23 17:43:34,271 | INFO     | all data control threads have been joined
[2025-11-23 18:53:03] 2025-11-23 17:43:34,545 | INFO     | [job] retrieve thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:34,976 | INFO     | [job] job monitor thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:35,113 | INFO     | [payload] control thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:35,170 | INFO     | [job] control thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:35,227 | INFO     | [job] validate thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:35,276 | INFO     | [data] control thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:35,359 | INFO     | [payload] validate_post thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:35,532 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:35,547 | INFO     | [data] copytool_out thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:35,735 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:35,736 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:35,793 | INFO     | [payload] failed_post thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:35,927 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:35,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 18:53:03] 2025-11-23 17:43:35,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 18:53:03] 2025-11-23 17:43:36,035 | INFO     | [data] copytool_in thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:36,976 | INFO     | [job] queue monitor thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:43:40,004 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 18:53:03] 2025-11-23 17:44:03,587 | INFO     | PID=502111 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 18:53:03] 2025-11-23 17:44:03,588 | INFO     | .. there are 4 such processes running
[2025-11-23 18:53:03] 2025-11-23 17:44:03,589 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 18:53:03] 2025-11-23 17:44:03,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 18:53:03] 2025-11-23 17:44:03,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 18:53:03] 2025-11-23 17:44:09,792 [wrapper] supervise_pilot (15 min periods counter: 60)
[2025-11-23 18:53:03] 2025-11-23 17:44:33,542 | INFO     | [monitor] cgroup control has ended
[2025-11-23 18:53:03] 2025-11-23 17:44:33,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22863031830336)>', '<ExcThread(monitor, started 22862792455936)>']
[2025-11-23 18:53:03] 2025-11-23 17:44:33,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 18:53:03] 2025-11-23 17:44:33,722 | INFO     | [monitor] control thread has ended
[2025-11-23 18:53:03] 2025-11-23 17:44:38,652 | INFO     | all workflow threads have been joined
[2025-11-23 18:53:03] 2025-11-23 17:44:38,652 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 18:53:03] 2025-11-23 17:44:38,652 | INFO     | traces error code: 0
[2025-11-23 18:53:03] 2025-11-23 17:44:38,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 18:53:03] 2025-11-23 17:44:38,821 [wrapper] ==== pilot stdout END ====
[2025-11-23 18:53:03] 2025-11-23 17:44:38,824 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 18:53:03] 2025-11-23 17:44:38,826 [wrapper] pilotpid: 502111
[2025-11-23 18:53:03] 2025-11-23 17:44:38,828 [wrapper] Pilot exit status: 0
[2025-11-23 18:53:03] 2025-11-23 17:44:38,838 [wrapper] pandaids: 6892549354
[2025-11-23 18:53:03] 2025-11-23 17:44:38,912 [wrapper] cleanup supervisor_pilot 1234760 502112
[2025-11-23 18:53:03] 2025-11-23 17:44:38,915 [wrapper] Test setup, not cleaning
[2025-11-23 18:53:03] 2025-11-23 17:44:38,918 [wrapper] apfmon messages muted
[2025-11-23 18:53:03] 2025-11-23 17:44:38,920 [wrapper] ==== wrapper stdout END ====
[2025-11-23 18:53:03] 2025-11-23 17:44:38,923 [wrapper] ==== wrapper stderr END ====
[2025-11-23 18:53:03]  *** Error codes and diagnostics ***
[2025-11-23 18:53:03]     "exeErrorCode": 0,
[2025-11-23 18:53:03]     "exeErrorDiag": "",
[2025-11-23 18:53:03]     "pilotErrorCode": 0,
[2025-11-23 18:53:03]     "pilotErrorDiag": "",
[2025-11-23 18:53:03]  *** Listing of results directory ***
[2025-11-23 18:53:03] total 1324712
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc    576529 Nov 19 09:32 pilot3.tar.gz
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc      5112 Nov 19 09:52 queuedata.json
[2025-11-23 18:53:03] -rwx------ 1 boinc boinc     36292 Nov 19 09:53 runpilot2-wrapper.sh
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc       100 Nov 23 03:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 18:53:03] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 03:58 run_atlas
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc       105 Nov 23 03:58 job.xml
[2025-11-23 18:53:03] -rw-r--r-- 2 boinc boinc 410529186 Nov 23 03:59 EVNT.47493027._000360.pool.root.1
[2025-11-23 18:53:03] -rw-r--r-- 2 boinc boinc    590090 Nov 23 03:59 input.tar.gz
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc      6634 Nov 23 03:59 init_data.xml
[2025-11-23 18:53:03] -rw-r--r-- 2 boinc boinc     15120 Nov 23 03:59 start_atlas.sh
[2025-11-23 18:53:03] drwxrwx--x 2 boinc boinc      4096 Nov 23 03:59 shared
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc         0 Nov 23 03:59 boinc_lockfile
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc      2769 Nov 23 03:59 pandaJob.out
[2025-11-23 18:53:03] -rw------- 1 boinc boinc    989784 Nov 23 03:59 agis_schedconf.cvmfs.json
[2025-11-23 18:53:03] drwx------ 5 boinc boinc      4096 Nov 23 03:59 pilot3
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc       532 Nov 23 18:33 boinc_task_state.xml
[2025-11-23 18:53:03] -rw------- 1 boinc boinc 923872799 Nov 23 18:42 HITS.47493029._003551.pool.root.1
[2025-11-23 18:53:03] -rw------- 1 boinc boinc      1043 Nov 23 18:43 memory_monitor_summary.json
[2025-11-23 18:53:03] -rw------- 1 boinc boinc   1526164 Nov 23 18:43 agis_ddmendpoints.agis.ALL.json
[2025-11-23 18:53:03] -rw------- 1 boinc boinc   1633456 Nov 23 18:43 log.47493029._003551.job.log.tgz.1
[2025-11-23 18:53:03] -rw------- 1 boinc boinc      8624 Nov 23 18:43 heartbeat.json
[2025-11-23 18:53:03] -rw------- 1 boinc boinc        95 Nov 23 18:44 pilot_heartbeat.json
[2025-11-23 18:53:03] -rw------- 1 boinc boinc      5018 Nov 23 18:44 pilotlog.txt
[2025-11-23 18:53:03] -rw------- 1 boinc boinc   7457935 Nov 23 18:44 log.47493029._003551.job.log.1
[2025-11-23 18:53:03] -rw------- 1 boinc boinc       353 Nov 23 18:44 output.list
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc       620 Nov 23 18:44 runtime_log
[2025-11-23 18:53:03] -rw------- 1 boinc boinc   9113600 Nov 23 18:44 result.tar.gz
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc      9070 Nov 23 18:44 runtime_log.err
[2025-11-23 18:53:03] -rw------- 1 boinc boinc       670 Nov 23 18:44 I1FLDm27sf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm96GKDmlKlvdn.diag
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc        28 Nov 23 18:52 wrapper_checkpoint.txt
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc      8192 Nov 23 18:53 boinc_mmap_file
[2025-11-23 18:53:03] -rw-r--r-- 1 boinc boinc     20994 Nov 23 18:53 stderr.txt
[2025-11-23 18:53:03] HITS file was successfully produced:
[2025-11-23 18:53:03] -rw------- 1 boinc boinc 923872799 Nov 23 18:42 shared/HITS.pool.root.1
[2025-11-23 18:53:03]  *** Contents of shared directory: ***
[2025-11-23 18:53:03] total 1312632
[2025-11-23 18:53:03] -rw-r--r-- 2 boinc boinc 410529186 Nov 23 03:59 ATLAS.root_0
[2025-11-23 18:53:03] -rw-r--r-- 2 boinc boinc    590090 Nov 23 03:59 input.tar.gz
[2025-11-23 18:53:03] -rw-r--r-- 2 boinc boinc     15120 Nov 23 03:59 start_atlas.sh
[2025-11-23 18:53:03] -rw------- 1 boinc boinc 923872799 Nov 23 18:42 HITS.pool.root.1
[2025-11-23 18:53:03] -rw------- 1 boinc boinc   9113600 Nov 23 18:44 result.tar.gz
18:53:05 (498199): run_atlas exited; CPU time 211615.873743
18:53:05 (498199): called boinc_finish(0)

</stderr_txt>
]]>

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