Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
01:53:20 (4665): wrapper (7.7.26015): starting
01:53:20 (4665): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 01:53:20] Arguments: --nthreads 4
[2025-11-22 01:53:20] Threads: 4
[2025-11-22 01:53:20] Checking for CVMFS
[2025-11-22 01:53:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 01:53:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 01:53:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 01:53:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 01:53:24] 2.13.3.0 4968 0 24136 153154 3 1 3566320 4096001 0 130560 0 0 0.000 1292 2156 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-11-22 01:53:24] CVMFS is ok
[2025-11-22 01:53:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 01:53:24] Checking for apptainer binary...
[2025-11-22 01:53:24] apptainer is not installed, using version from CVMFS
[2025-11-22 01:53:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 01:53:25] senture-z10pe-l
[2025-11-22 01:53:25] apptainer works
[2025-11-22 01:53:25] Set ATHENA_PROC_NUMBER=4
[2025-11-22 01:53:25] Set ATHENA_CORE_NUMBER=4
[2025-11-22 01:53:25] Starting ATLAS job with PandaID=6892543918
[2025-11-22 01:53:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 06:47:51]  *** The last 200 lines of the pilot log: ***
[2025-11-23 06:47:51] 2025-11-23 06:47:12,967 | INFO     | time since job start (104000s) is within the limit (172800.0s)
[2025-11-23 06:47:51] 2025-11-23 06:47:12,994 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 06:47:51] 2025-11-23 06:47:12,998 | INFO     | found 36 cores (18 cores per socket, 2 sockets) HT, CPU MHz: 2294.962
[2025-11-23 06:47:51] 2025-11-23 06:47:13,005 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6892543918/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 06:47:51] 2025-11-23 06:47:13,006 | INFO     | extracted standard info from prmon json
[2025-11-23 06:47:51] 2025-11-23 06:47:13,006 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 06:47:51] 2025-11-23 06:47:13,006 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 06:47:51] 2025-11-23 06:47:13,026 | INFO     | fitting pss+swap vs Time
[2025-11-23 06:47:51] 2025-11-23 06:47:13,028 | INFO     | sum of square deviations: 1536919614735.8835
[2025-11-23 06:47:51] 2025-11-23 06:47:13,079 | INFO     | sum of deviations: 2913774253456.5757
[2025-11-23 06:47:51] 2025-11-23 06:47:13,080 | INFO     | mean x: 1763828437.0082111
[2025-11-23 06:47:51] 2025-11-23 06:47:13,080 | INFO     | mean y: 2248150.1014662758
[2025-11-23 06:47:51] 2025-11-23 06:47:13,080 | INFO     | intersect: -3341711962.0559115
[2025-11-23 06:47:51] 2025-11-23 06:47:13,081 | INFO     | chi2: 4.877516053943453
[2025-11-23 06:47:51] 2025-11-23 06:47:13,083 | INFO     | sum of square deviations: 1523437933670.885
[2025-11-23 06:47:51] 2025-11-23 06:47:13,133 | INFO     | sum of deviations: 3287329784868.5776
[2025-11-23 06:47:51] 2025-11-23 06:47:13,133 | INFO     | mean x: 1763828284.5082352
[2025-11-23 06:47:51] 2025-11-23 06:47:13,133 | INFO     | mean y: 2252373.5305882352
[2025-11-23 06:47:51] 2025-11-23 06:47:13,133 | INFO     | intersect: -3803800454.0276613
[2025-11-23 06:47:51] 2025-11-23 06:47:13,135 | INFO     | chi2: 2.4793023382385257
[2025-11-23 06:47:51] 2025-11-23 06:47:13,135 | INFO     | current chi2=2.4793023382385257 (change=49.16875083918957 %)
[2025-11-23 06:47:51] 2025-11-23 06:47:13,136 | INFO     | sum of square deviations: 1510035323855.884
[2025-11-23 06:47:51] 2025-11-23 06:47:13,185 | INFO     | sum of deviations: 3288173038249.4995
[2025-11-23 06:47:51] 2025-11-23 06:47:13,186 | INFO     | mean x: 1763828132.0082595
[2025-11-23 06:47:51] 2025-11-23 06:47:13,186 | INFO     | mean y: 2252382.607079646
[2025-11-23 06:47:51] 2025-11-23 06:47:13,186 | INFO     | intersect: -3838566448.6807775
[2025-11-23 06:47:51] 2025-11-23 06:47:13,187 | INFO     | chi2: 2.4476318890406046
[2025-11-23 06:47:51] 2025-11-23 06:47:13,187 | INFO     | current chi2=2.4476318890406046 (change=1.27739359211923 %)
[2025-11-23 06:47:51] 2025-11-23 06:47:13,187 | INFO     | right removable region: 1694
[2025-11-23 06:47:51] 2025-11-23 06:47:13,189 | INFO     | sum of square deviations: 1523437925130.885
[2025-11-23 06:47:51] 2025-11-23 06:47:13,233 | INFO     | sum of deviations: 2564578678645.8076
[2025-11-23 06:47:51] 2025-11-23 06:47:13,233 | INFO     | mean x: 1763828589.5082352
[2025-11-23 06:47:51] 2025-11-23 06:47:13,233 | INFO     | mean y: 2252097.014117647
[2025-11-23 06:47:51] 2025-11-23 06:47:13,233 | INFO     | intersect: -2967003898.7955556
[2025-11-23 06:47:51] 2025-11-23 06:47:13,234 | INFO     | chi2: 2.7632812765835553
[2025-11-23 06:47:51] 2025-11-23 06:47:13,234 | INFO     | current chi2=2.7632812765835553 (change=43.34654676637194 %)
[2025-11-23 06:47:51] 2025-11-23 06:47:13,236 | INFO     | sum of square deviations: 1510035306775.884
[2025-11-23 06:47:51] 2025-11-23 06:47:13,277 | INFO     | sum of deviations: 2483792900062.787
[2025-11-23 06:47:51] 2025-11-23 06:47:13,278 | INFO     | mean x: 1763828742.0082595
[2025-11-23 06:47:51] 2025-11-23 06:47:13,278 | INFO     | mean y: 2253016.1581120943
[2025-11-23 06:47:51] 2025-11-23 06:47:13,278 | INFO     | intersect: -2898993919.3726535
[2025-11-23 06:47:51] 2025-11-23 06:47:13,279 | INFO     | chi2: 2.7119278991987397
[2025-11-23 06:47:51] 2025-11-23 06:47:13,279 | INFO     | current chi2=2.7119278991987397 (change=1.858420198478944 %)
[2025-11-23 06:47:51] 2025-11-23 06:47:13,279 | INFO     | left removable region: 20
[2025-11-23 06:47:51] 2025-11-23 06:47:13,280 | INFO     | sum of square deviations: 1454602538052.3826
[2025-11-23 06:47:51] 2025-11-23 06:47:13,322 | INFO     | sum of deviations: 2730760415846.797
[2025-11-23 06:47:51] 2025-11-23 06:47:13,322 | INFO     | mean x: 1763828711.5083632
[2025-11-23 06:47:51] 2025-11-23 06:47:13,322 | INFO     | mean y: 2258707.7287933095
[2025-11-23 06:47:51] 2025-11-23 06:47:13,322 | INFO     | intersect: -3309019459.1374636
[2025-11-23 06:47:51] 2025-11-23 06:47:13,323 | INFO     | chi2: 0.229021730635885
[2025-11-23 06:47:51] 2025-11-23 06:47:13,323 | INFO     | current memory leak: 1.88 B/s (using 1674 data points, chi2=0.23)
[2025-11-23 06:47:51] 2025-11-23 06:47:13,324 | INFO     | could have reported an average CPU frequency of 2294 MHz (61 samples)
[2025-11-23 06:47:51] 2025-11-23 06:47:13,324 | INFO     | ..............................
[2025-11-23 06:47:51] 2025-11-23 06:47:13,324 | INFO     | . Timing measurements:
[2025-11-23 06:47:51] 2025-11-23 06:47:13,324 | INFO     | . get job = 0 s
[2025-11-23 06:47:51] 2025-11-23 06:47:13,324 | INFO     | . initial setup = 2 s
[2025-11-23 06:47:51] 2025-11-23 06:47:13,324 | INFO     | . payload setup = 8 s
[2025-11-23 06:47:51] 2025-11-23 06:47:13,325 | INFO     | . stage-in = 0 s
[2025-11-23 06:47:51] 2025-11-23 06:47:13,325 | INFO     | . payload execution = 103962 s
[2025-11-23 06:47:51] 2025-11-23 06:47:13,325 | INFO     | . stage-out = 2 s
[2025-11-23 06:47:51] 2025-11-23 06:47:13,325 | INFO     | . log creation = 0 s
[2025-11-23 06:47:51] 2025-11-23 06:47:13,325 | INFO     | ..............................
[2025-11-23 06:47:51] 2025-11-23 06:47:13,387 | INFO     | 
[2025-11-23 06:47:51] 2025-11-23 06:47:13,387 | INFO     | job summary report
[2025-11-23 06:47:51] 2025-11-23 06:47:13,388 | INFO     | --------------------------------------------------
[2025-11-23 06:47:51] 2025-11-23 06:47:13,388 | INFO     | PanDA job id: 6892543918
[2025-11-23 06:47:51] 2025-11-23 06:47:13,388 | INFO     | task id: 47493029
[2025-11-23 06:47:51] 2025-11-23 06:47:13,388 | INFO     | errors: (none)
[2025-11-23 06:47:51] 2025-11-23 06:47:13,388 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 06:47:51] 2025-11-23 06:47:13,388 | INFO     | pilot state: finished 
[2025-11-23 06:47:51] 2025-11-23 06:47:13,388 | INFO     | transexitcode: 0
[2025-11-23 06:47:51] 2025-11-23 06:47:13,389 | INFO     | exeerrorcode: 0
[2025-11-23 06:47:51] 2025-11-23 06:47:13,389 | INFO     | exeerrordiag: 
[2025-11-23 06:47:51] 2025-11-23 06:47:13,389 | INFO     | exitcode: 0
[2025-11-23 06:47:51] 2025-11-23 06:47:13,389 | INFO     | exitmsg: OK
[2025-11-23 06:47:51] 2025-11-23 06:47:13,389 | INFO     | cpuconsumptiontime: 400512 s
[2025-11-23 06:47:51] 2025-11-23 06:47:13,389 | INFO     | nevents: 1000
[2025-11-23 06:47:51] 2025-11-23 06:47:13,389 | INFO     | neventsw: 0
[2025-11-23 06:47:51] 2025-11-23 06:47:13,389 | INFO     | pid: 193710
[2025-11-23 06:47:51] 2025-11-23 06:47:13,390 | INFO     | pgrp: 193710
[2025-11-23 06:47:51] 2025-11-23 06:47:13,390 | INFO     | corecount: 4
[2025-11-23 06:47:51] 2025-11-23 06:47:13,390 | INFO     | event service: False
[2025-11-23 06:47:51] 2025-11-23 06:47:13,390 | INFO     | sizes: {0: 2297968, 1: 2298831, 6: 2299093, 12: 2299121, 103975: 2375468, 103977: 2384476, 103978: 2384660, 103985: 2384906}
[2025-11-23 06:47:51] 2025-11-23 06:47:13,390 | INFO     | --------------------------------------------------
[2025-11-23 06:47:51] 2025-11-23 06:47:13,390 | INFO     | 
[2025-11-23 06:47:51] 2025-11-23 06:47:13,391 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-23 06:47:51] 2025-11-23 06:47:13,413 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,413 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,413 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,413 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 06:47:51] 2025-11-23 06:47:13,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 06:47:51] 2025-11-23 06:47:13,415 | INFO     | job 6892543918 has completed (purged errors)
[2025-11-23 06:47:51] 2025-11-23 06:47:13,416 | INFO     | overall cleanup function is called
[2025-11-23 06:47:51] 2025-11-23 06:47:14,428 | INFO     | --- collectZombieJob: --- 10, [193710]
[2025-11-23 06:47:51] 2025-11-23 06:47:14,428 | INFO     | zombie collector waiting for pid 193710
[2025-11-23 06:47:51] 2025-11-23 06:47:14,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 06:47:51] 2025-11-23 06:47:14,428 | INFO     | collected zombie processes
[2025-11-23 06:47:51] 2025-11-23 06:47:14,428 | INFO     | will attempt to kill all subprocesses of pid=193710
[2025-11-23 06:47:51] 2025-11-23 06:47:14,764 | INFO     | process IDs to be killed: [193710] (in reverse order)
[2025-11-23 06:47:51] 2025-11-23 06:47:14,880 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 06:47:51] 2025-11-23 06:47:14,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 06:47:51] 2025-11-23 06:47:14,886 | INFO     | did not find any defunct processes belonging to 193710
[2025-11-23 06:47:51] 2025-11-23 06:47:14,890 | INFO     | did not find any defunct processes belonging to 193710
[2025-11-23 06:47:51] 2025-11-23 06:47:14,893 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 06:47:51] 2025-11-23 06:47:14,893 | INFO     | ready for new job
[2025-11-23 06:47:51] 2025-11-23 06:47:14,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 06:47:51] 2025-11-23 06:47:14,899 | INFO     | ***************************************
[2025-11-23 06:47:51] 2025-11-23 06:47:14,899 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 06:47:51] 2025-11-23 06:47:14,899 | INFO     | ***************************************
[2025-11-23 06:47:51] 2025-11-23 06:47:14,899 | INFO     | 
[2025-11-23 06:47:51] 2025-11-23 06:47:14,901 | INFO     | pilot is running in a VM
[2025-11-23 06:47:51] 2025-11-23 06:47:14,901 | INFO     | architecture information:
[2025-11-23 06:47:51] 2025-11-23 06:47:14,902 | INFO     | executing command: cat /etc/os-release
[2025-11-23 06:47:51] 2025-11-23 06:47:14,917 | INFO     | cat /etc/os-release:
[2025-11-23 06:47:51] NAME="CentOS Linux"
[2025-11-23 06:47:51] VERSION="7 (Core)"
[2025-11-23 06:47:51] ID="centos"
[2025-11-23 06:47:51] ID_LIKE="rhel fedora"
[2025-11-23 06:47:51] VERSION_ID="7"
[2025-11-23 06:47:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 06:47:51] ANSI_COLOR="0;31"
[2025-11-23 06:47:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 06:47:51] HOME_URL="https://www.centos.org/"
[2025-11-23 06:47:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 06:47:51] 
[2025-11-23 06:47:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 06:47:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 06:47:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 06:47:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 06:47:51] 
[2025-11-23 06:47:51] 2025-11-23 06:47:14,917 | INFO     | ***************************************
[2025-11-23 06:47:51] 2025-11-23 06:47:15,420 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-23 06:47:51] 2025-11-23 06:47:15,439 | INFO     | sufficient remaining disk space (92581920768 B)
[2025-11-23 06:47:51] 2025-11-23 06:47:15,440 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 06:47:51] 2025-11-23 06:47:15,440 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 06:47:51] 2025-11-23 06:47:15,440 | INFO     | update_server=False
[2025-11-23 06:47:51] 2025-11-23 06:47:15,440 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 06:47:51] 2025-11-23 06:47:15,452 | INFO     | all job control threads have been joined
[2025-11-23 06:47:51] 2025-11-23 06:47:15,867 | INFO     | all data control threads have been joined
[2025-11-23 06:47:51] 2025-11-23 06:47:16,116 | INFO     | all payload control threads have been joined
[2025-11-23 06:47:51] 2025-11-23 06:47:16,169 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 06:47:51] 2025-11-23 06:47:16,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 06:47:51] 2025-11-23 06:47:16,211 | INFO     | aborting loop
[2025-11-23 06:47:51] 2025-11-23 06:47:16,446 | INFO     | [job] retrieve thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:16,455 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:16,458 | INFO     | [job] control thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:16,610 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 06:47:51] 2025-11-23 06:47:16,784 | INFO     | [job] validate thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:16,873 | INFO     | [data] control thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:16,988 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:17,117 | INFO     | [data] copytool_in thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:17,122 | INFO     | [payload] control thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:17,191 | INFO     | [payload] validate_post thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:17,216 | INFO     | [job] job monitor thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:17,244 | INFO     | [payload] failed_post thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:17,519 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:18,175 | INFO     | [data] copytool_out thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:18,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 06:47:51] 2025-11-23 06:47:19,402 | INFO     | [job] queue monitor thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:20,615 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:26,148 | INFO     | job.realtimelogging is not enabled
[2025-11-23 06:47:51] 2025-11-23 06:47:27,154 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 06:47:51] 2025-11-23 06:47:45,492 | INFO     | [monitor] cgroup control has ended
[2025-11-23 06:47:51] 2025-11-23 06:47:46,419 | INFO     | PID=60885 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 06:47:51] 2025-11-23 06:47:46,419 | INFO     | .. there are 9 such processes running
[2025-11-23 06:47:51] 2025-11-23 06:47:46,419 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 06:47:51] 2025-11-23 06:47:46,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 06:47:51] 2025-11-23 06:47:46,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 06:47:51] 2025-11-23 06:47:46,440 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136323285890880)>', '<ExcThread(monitor, started 136322505230080)>']
[2025-11-23 06:47:51] 2025-11-23 06:47:47,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 06:47:51] 2025-11-23 06:47:47,425 | INFO     | [monitor] control thread has ended
[2025-11-23 06:47:51] 2025-11-23 06:47:51,455 | INFO     | all workflow threads have been joined
[2025-11-23 06:47:51] 2025-11-23 06:47:51,455 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 06:47:51] 2025-11-23 06:47:51,456 | INFO     | traces error code: 0
[2025-11-23 06:47:51] 2025-11-23 06:47:51,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 06:47:51] 2025-11-23 06:47:51,555 [wrapper] ==== pilot stdout END ====
[2025-11-23 06:47:51] 2025-11-23 06:47:51,559 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 06:47:51] 2025-11-23 06:47:51,562 [wrapper] pilotpid: 60885
[2025-11-23 06:47:51] 2025-11-23 06:47:51,566 [wrapper] Pilot exit status: 0
[2025-11-23 06:47:51] 2025-11-23 06:47:51,579 [wrapper] pandaids: 6892543918
[2025-11-23 06:47:51] 2025-11-23 06:47:51,637 [wrapper] cleanup supervisor_pilot 2779443 60890
[2025-11-23 06:47:51] 2025-11-23 06:47:51,641 [wrapper] Test setup, not cleaning
[2025-11-23 06:47:51] 2025-11-23 06:47:51,645 [wrapper] apfmon messages muted
[2025-11-23 06:47:51] 2025-11-23 06:47:51,649 [wrapper] ==== wrapper stdout END ====
[2025-11-23 06:47:51] 2025-11-23 06:47:51,652 [wrapper] ==== wrapper stderr END ====
[2025-11-23 06:47:51]  *** Error codes and diagnostics ***
[2025-11-23 06:47:51]     "exeErrorCode": 0,
[2025-11-23 06:47:51]     "exeErrorDiag": "",
[2025-11-23 06:47:51]     "pilotErrorCode": 0,
[2025-11-23 06:47:51]     "pilotErrorDiag": "",
[2025-11-23 06:47:51]  *** Listing of results directory ***
[2025-11-23 06:47:51] total 1338712
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:00 queuedata.json
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-11-23 06:47:51] -rwx------ 1 boinc boinc     36292 Nov 19 08:01 runpilot2-wrapper.sh
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc       100 Nov 22 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 06:47:51] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 01:53 run_atlas
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc       105 Nov 22 01:53 job.xml
[2025-11-23 06:47:51] -rw-r--r-- 2 boinc boinc 411439610 Nov 22 01:53 EVNT.47493027._000265.pool.root.1
[2025-11-23 06:47:51] drwxrwx--x 2 boinc boinc      4096 Nov 22 01:53 shared
[2025-11-23 06:47:51] -rw-r--r-- 2 boinc boinc    590102 Nov 22 01:53 input.tar.gz
[2025-11-23 06:47:51] -rw-r--r-- 2 boinc boinc     15120 Nov 22 01:53 start_atlas.sh
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc         0 Nov 22 01:53 boinc_setup_complete
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc      6530 Nov 22 01:53 init_data.xml
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc         0 Nov 22 01:53 boinc_lockfile
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc      2773 Nov 22 01:53 pandaJob.out
[2025-11-23 06:47:51] -rw------- 1 boinc boinc    989798 Nov 22 01:53 agis_schedconf.cvmfs.json
[2025-11-23 06:47:51] drwx------ 5 boinc boinc      4096 Nov 22 01:53 pilot3
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc       534 Nov 23 06:40 boinc_task_state.xml
[2025-11-23 06:47:51] -rw------- 1 boinc boinc 922765515 Nov 23 06:46 HITS.47493029._002608.pool.root.1
[2025-11-23 06:47:51] -rw------- 1 boinc boinc      1045 Nov 23 06:46 memory_monitor_summary.json
[2025-11-23 06:47:51] -rw------- 1 boinc boinc   1526164 Nov 23 06:47 agis_ddmendpoints.agis.ALL.json
[2025-11-23 06:47:51] -rw------- 1 boinc boinc   2242342 Nov 23 06:47 log.47493029._002608.job.log.tgz.1
[2025-11-23 06:47:51] -rw------- 1 boinc boinc        95 Nov 23 06:47 pilot_heartbeat.json
[2025-11-23 06:47:51] -rw------- 1 boinc boinc      8620 Nov 23 06:47 heartbeat.json
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc      8192 Nov 23 06:47 boinc_mmap_file
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc        30 Nov 23 06:47 wrapper_checkpoint.txt
[2025-11-23 06:47:51] -rw------- 1 boinc boinc      4962 Nov 23 06:47 pilotlog.txt
[2025-11-23 06:47:51] -rw------- 1 boinc boinc  14113666 Nov 23 06:47 log.47493029._002608.job.log.1
[2025-11-23 06:47:51] -rw------- 1 boinc boinc       353 Nov 23 06:47 output.list
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc       620 Nov 23 06:47 runtime_log
[2025-11-23 06:47:51] -rw------- 1 boinc boinc  16373760 Nov 23 06:47 result.tar.gz
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc      8794 Nov 23 06:47 runtime_log.err
[2025-11-23 06:47:51] -rw------- 1 boinc boinc       665 Nov 23 06:47 g4iLDmYJsf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmv3FKDmKBv4rn.diag
[2025-11-23 06:47:51] -rw-r--r-- 1 boinc boinc     20957 Nov 23 06:47 stderr.txt
[2025-11-23 06:47:51] HITS file was successfully produced:
[2025-11-23 06:47:51] -rw------- 1 boinc boinc 922765515 Nov 23 06:46 shared/HITS.pool.root.1
[2025-11-23 06:47:51]  *** Contents of shared directory: ***
[2025-11-23 06:47:51] total 1319536
[2025-11-23 06:47:51] -rw-r--r-- 2 boinc boinc 411439610 Nov 22 01:53 ATLAS.root_0
[2025-11-23 06:47:51] -rw-r--r-- 2 boinc boinc    590102 Nov 22 01:53 input.tar.gz
[2025-11-23 06:47:51] -rw-r--r-- 2 boinc boinc     15120 Nov 22 01:53 start_atlas.sh
[2025-11-23 06:47:51] -rw------- 1 boinc boinc 922765515 Nov 23 06:46 HITS.pool.root.1
[2025-11-23 06:47:51] -rw------- 1 boinc boinc  16373760 Nov 23 06:47 result.tar.gz
06:47:53 (4665): run_atlas exited; CPU time 407272.268199
06:47:53 (4665): called boinc_finish(0)

</stderr_txt>
]]>

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