Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
01:53:22 (4793): wrapper (7.7.26015): starting
01:53:22 (4793): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 01:53:22] Arguments: --nthreads 4
[2025-11-22 01:53:22] Threads: 4
[2025-11-22 01:53:22] Checking for CVMFS
[2025-11-22 01:53:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 01:53:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 01:53:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 01:53:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 01:53:25] 2.13.3.0 4968 0 24136 153154 3 1 3566320 4096001 0 130560 0 2 98.077 1292 2156 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-11-22 01:53:25] CVMFS is ok
[2025-11-22 01:53:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 01:53:25] Checking for apptainer binary...
[2025-11-22 01:53:25] apptainer is not installed, using version from CVMFS
[2025-11-22 01:53:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 01:53:25] senture-z10pe-l
[2025-11-22 01:53:25] apptainer works
[2025-11-22 01:53:25] Set ATHENA_PROC_NUMBER=4
[2025-11-22 01:53:25] Set ATHENA_CORE_NUMBER=4
[2025-11-22 01:53:25] Starting ATLAS job with PandaID=6892527333
[2025-11-22 01:53:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 06:28:49]  *** The last 200 lines of the pilot log: ***
[2025-11-23 06:28:49] 2025-11-23 06:27:54,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 06:28:49] 2025-11-23 06:27:55,738 | INFO     | time since job start (102843s) is within the limit (172800.0s)
[2025-11-23 06:28:49] 2025-11-23 06:27:55,886 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 06:28:49] 2025-11-23 06:27:55,888 | INFO     | found 36 cores (18 cores per socket, 2 sockets) HT, CPU MHz: 2294.962
[2025-11-23 06:28:49] 2025-11-23 06:27:55,895 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6892527333/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 06:28:49] 2025-11-23 06:27:55,895 | INFO     | extracted standard info from prmon json
[2025-11-23 06:28:49] 2025-11-23 06:27:55,896 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 06:28:49] 2025-11-23 06:27:55,896 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 06:28:49] 2025-11-23 06:27:55,913 | INFO     | fitting pss+swap vs Time
[2025-11-23 06:28:49] 2025-11-23 06:27:55,914 | INFO     | sum of square deviations: 1486109594737.367
[2025-11-23 06:28:49] 2025-11-23 06:27:55,959 | INFO     | sum of deviations: 2384512925958.1406
[2025-11-23 06:28:49] 2025-11-23 06:27:55,959 | INFO     | mean x: 1763827857.5088968
[2025-11-23 06:28:49] 2025-11-23 06:27:55,959 | INFO     | mean y: 2243161.5243179123
[2025-11-23 06:28:49] 2025-11-23 06:27:55,959 | INFO     | intersect: -2827878076.027009
[2025-11-23 06:28:49] 2025-11-23 06:27:55,960 | INFO     | chi2: 6.197246033026261
[2025-11-23 06:28:49] 2025-11-23 06:27:55,962 | INFO     | sum of square deviations: 1472927147494.8662
[2025-11-23 06:28:49] 2025-11-23 06:27:56,004 | INFO     | sum of deviations: 2816552289006.0596
[2025-11-23 06:28:49] 2025-11-23 06:27:56,004 | INFO     | mean x: 1763827705.0089233
[2025-11-23 06:28:49] 2025-11-23 06:27:56,004 | INFO     | mean y: 2248159.529446758
[2025-11-23 06:28:49] 2025-11-23 06:27:56,004 | INFO     | intersect: -3370568322.537942
[2025-11-23 06:28:49] 2025-11-23 06:27:56,005 | INFO     | chi2: 3.232061323472805
[2025-11-23 06:28:49] 2025-11-23 06:27:56,005 | INFO     | current chi2=3.232061323472805 (change=47.84681282220268 %)
[2025-11-23 06:28:49] 2025-11-23 06:27:56,006 | INFO     | sum of square deviations: 1459822887764.8655
[2025-11-23 06:28:49] 2025-11-23 06:27:56,049 | INFO     | sum of deviations: 2920503754599.739
[2025-11-23 06:28:49] 2025-11-23 06:27:56,050 | INFO     | mean x: 1763827552.50895
[2025-11-23 06:28:49] 2025-11-23 06:27:56,050 | INFO     | mean y: 2249366.1843675417
[2025-11-23 06:28:49] 2025-11-23 06:27:56,050 | INFO     | intersect: -3526442390.0162473
[2025-11-23 06:28:49] 2025-11-23 06:27:56,051 | INFO     | chi2: 2.464865979005835
[2025-11-23 06:28:49] 2025-11-23 06:27:56,051 | INFO     | current chi2=2.464865979005835 (change=23.73702933466092 %)
[2025-11-23 06:28:49] 2025-11-23 06:27:56,051 | INFO     | right removable region: 1675
[2025-11-23 06:28:49] 2025-11-23 06:27:56,053 | INFO     | sum of square deviations: 1472927138344.866
[2025-11-23 06:28:49] 2025-11-23 06:27:56,095 | INFO     | sum of deviations: 2039285552216.6597
[2025-11-23 06:28:49] 2025-11-23 06:27:56,095 | INFO     | mean x: 1763828010.0089233
[2025-11-23 06:28:49] 2025-11-23 06:27:56,095 | INFO     | mean y: 2247152.1558596073
[2025-11-23 06:28:49] 2025-11-23 06:27:56,095 | INFO     | intersect: -2439794197.8651366
[2025-11-23 06:28:49] 2025-11-23 06:27:56,096 | INFO     | chi2: 4.07889076266492
[2025-11-23 06:28:49] 2025-11-23 06:27:56,097 | INFO     | current chi2=4.07889076266492 (change=34.18220382202412 %)
[2025-11-23 06:28:49] 2025-11-23 06:27:56,098 | INFO     | sum of square deviations: 1459822869464.8655
[2025-11-23 06:28:49] 2025-11-23 06:27:56,141 | INFO     | sum of deviations: 1959155297730.5676
[2025-11-23 06:28:49] 2025-11-23 06:27:56,142 | INFO     | mean x: 1763828162.50895
[2025-11-23 06:28:49] 2025-11-23 06:27:56,142 | INFO     | mean y: 2248084.562052506
[2025-11-23 06:28:49] 2025-11-23 06:27:56,142 | INFO     | intersect: -2364897519.98141
[2025-11-23 06:28:49] 2025-11-23 06:27:56,143 | INFO     | chi2: 4.020894951718066
[2025-11-23 06:28:49] 2025-11-23 06:27:56,143 | INFO     | current chi2=4.020894951718066 (change=1.4218525163189821 %)
[2025-11-23 06:28:49] 2025-11-23 06:27:56,143 | INFO     | left removable region: 20
[2025-11-23 06:28:49] 2025-11-23 06:27:56,144 | INFO     | sum of square deviations: 1405633519464.8643
[2025-11-23 06:28:49] 2025-11-23 06:27:56,185 | INFO     | sum of deviations: 2371276222524.5225
[2025-11-23 06:28:49] 2025-11-23 06:27:56,186 | INFO     | mean x: 1763828132.0090635
[2025-11-23 06:28:49] 2025-11-23 06:27:56,186 | INFO     | mean y: 2255748.898489426
[2025-11-23 06:28:49] 2025-11-23 06:27:56,186 | INFO     | intersect: -2973287770.898375
[2025-11-23 06:28:49] 2025-11-23 06:27:56,187 | INFO     | chi2: 0.22729072653891447
[2025-11-23 06:28:49] 2025-11-23 06:27:56,187 | INFO     | current memory leak: 1.69 B/s (using 1655 data points, chi2=0.23)
[2025-11-23 06:28:49] 2025-11-23 06:27:56,188 | INFO     | could have reported an average CPU frequency of 2294 MHz (60 samples)
[2025-11-23 06:28:49] 2025-11-23 06:27:56,188 | INFO     | ..............................
[2025-11-23 06:28:49] 2025-11-23 06:27:56,188 | INFO     | . Timing measurements:
[2025-11-23 06:28:49] 2025-11-23 06:27:56,188 | INFO     | . get job = 0 s
[2025-11-23 06:28:49] 2025-11-23 06:27:56,188 | INFO     | . initial setup = 2 s
[2025-11-23 06:28:49] 2025-11-23 06:27:56,188 | INFO     | . payload setup = 8 s
[2025-11-23 06:28:49] 2025-11-23 06:27:56,188 | INFO     | . stage-in = 0 s
[2025-11-23 06:28:49] 2025-11-23 06:27:56,188 | INFO     | . payload execution = 102801 s
[2025-11-23 06:28:49] 2025-11-23 06:27:56,189 | INFO     | . stage-out = 3 s
[2025-11-23 06:28:49] 2025-11-23 06:27:56,189 | INFO     | . log creation = 0 s
[2025-11-23 06:28:49] 2025-11-23 06:27:56,189 | INFO     | ..............................
[2025-11-23 06:28:49] 2025-11-23 06:27:56,248 | INFO     | 
[2025-11-23 06:28:49] 2025-11-23 06:27:56,248 | INFO     | job summary report
[2025-11-23 06:28:49] 2025-11-23 06:27:56,248 | INFO     | --------------------------------------------------
[2025-11-23 06:28:49] 2025-11-23 06:27:56,248 | INFO     | PanDA job id: 6892527333
[2025-11-23 06:28:49] 2025-11-23 06:27:56,249 | INFO     | task id: 47493029
[2025-11-23 06:28:49] 2025-11-23 06:27:56,249 | INFO     | errors: (none)
[2025-11-23 06:28:49] 2025-11-23 06:27:56,249 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 06:28:49] 2025-11-23 06:27:56,249 | INFO     | pilot state: finished 
[2025-11-23 06:28:49] 2025-11-23 06:27:56,249 | INFO     | transexitcode: 0
[2025-11-23 06:28:49] 2025-11-23 06:27:56,249 | INFO     | exeerrorcode: 0
[2025-11-23 06:28:49] 2025-11-23 06:27:56,249 | INFO     | exeerrordiag: 
[2025-11-23 06:28:49] 2025-11-23 06:27:56,250 | INFO     | exitcode: 0
[2025-11-23 06:28:49] 2025-11-23 06:27:56,250 | INFO     | exitmsg: OK
[2025-11-23 06:28:49] 2025-11-23 06:27:56,250 | INFO     | cpuconsumptiontime: 395711 s
[2025-11-23 06:28:49] 2025-11-23 06:27:56,250 | INFO     | nevents: 1000
[2025-11-23 06:28:49] 2025-11-23 06:27:56,250 | INFO     | neventsw: 0
[2025-11-23 06:28:49] 2025-11-23 06:27:56,250 | INFO     | pid: 193839
[2025-11-23 06:28:49] 2025-11-23 06:27:56,251 | INFO     | pgrp: 193839
[2025-11-23 06:28:49] 2025-11-23 06:27:56,251 | INFO     | corecount: 4
[2025-11-23 06:28:49] 2025-11-23 06:27:56,251 | INFO     | event service: False
[2025-11-23 06:28:49] 2025-11-23 06:27:56,251 | INFO     | sizes: {0: 2297968, 1: 2298831, 6: 2299093, 12: 2299121, 102813: 2374996, 102817: 2384188, 102828: 2384378}
[2025-11-23 06:28:49] 2025-11-23 06:27:56,251 | INFO     | --------------------------------------------------
[2025-11-23 06:28:49] 2025-11-23 06:27:56,251 | INFO     | 
[2025-11-23 06:28:49] 2025-11-23 06:27:56,251 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-23 06:28:49] 2025-11-23 06:27:56,276 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,277 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,277 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,277 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,278 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,278 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,278 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,278 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,280 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,280 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 06:28:49] 2025-11-23 06:27:56,280 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,280 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 06:28:49] 2025-11-23 06:27:56,280 | INFO     | job 6892527333 has completed (purged errors)
[2025-11-23 06:28:49] 2025-11-23 06:27:56,281 | INFO     | overall cleanup function is called
[2025-11-23 06:28:49] 2025-11-23 06:27:57,297 | INFO     | --- collectZombieJob: --- 10, [193839]
[2025-11-23 06:28:49] 2025-11-23 06:27:57,297 | INFO     | zombie collector waiting for pid 193839
[2025-11-23 06:28:49] 2025-11-23 06:27:57,297 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 06:28:49] 2025-11-23 06:27:57,298 | INFO     | collected zombie processes
[2025-11-23 06:28:49] 2025-11-23 06:27:57,298 | INFO     | will attempt to kill all subprocesses of pid=193839
[2025-11-23 06:28:49] 2025-11-23 06:27:57,883 | INFO     | process IDs to be killed: [193839] (in reverse order)
[2025-11-23 06:28:49] 2025-11-23 06:27:58,106 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 06:28:49] 2025-11-23 06:27:58,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 06:28:49] 2025-11-23 06:27:58,118 | INFO     | did not find any defunct processes belonging to 193839
[2025-11-23 06:28:49] 2025-11-23 06:27:58,129 | INFO     | did not find any defunct processes belonging to 193839
[2025-11-23 06:28:49] 2025-11-23 06:27:58,133 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 06:28:49] 2025-11-23 06:27:58,133 | INFO     | ready for new job
[2025-11-23 06:28:49] 2025-11-23 06:27:58,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 06:28:49] 2025-11-23 06:27:58,141 | INFO     | ***************************************
[2025-11-23 06:28:49] 2025-11-23 06:27:58,141 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 06:28:49] 2025-11-23 06:27:58,141 | INFO     | ***************************************
[2025-11-23 06:28:49] 2025-11-23 06:27:58,141 | INFO     | 
[2025-11-23 06:28:49] 2025-11-23 06:27:58,144 | INFO     | pilot is running in a VM
[2025-11-23 06:28:49] 2025-11-23 06:27:58,145 | INFO     | architecture information:
[2025-11-23 06:28:49] 2025-11-23 06:27:58,145 | INFO     | executing command: cat /etc/os-release
[2025-11-23 06:28:49] 2025-11-23 06:27:58,162 | INFO     | cat /etc/os-release:
[2025-11-23 06:28:49] NAME="CentOS Linux"
[2025-11-23 06:28:49] VERSION="7 (Core)"
[2025-11-23 06:28:49] ID="centos"
[2025-11-23 06:28:49] ID_LIKE="rhel fedora"
[2025-11-23 06:28:49] VERSION_ID="7"
[2025-11-23 06:28:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 06:28:49] ANSI_COLOR="0;31"
[2025-11-23 06:28:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 06:28:49] HOME_URL="https://www.centos.org/"
[2025-11-23 06:28:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 06:28:49] 
[2025-11-23 06:28:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 06:28:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 06:28:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 06:28:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 06:28:49] 
[2025-11-23 06:28:49] 2025-11-23 06:27:58,162 | INFO     | ***************************************
[2025-11-23 06:28:49] 2025-11-23 06:27:58,665 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-23 06:28:49] 2025-11-23 06:27:58,688 | INFO     | sufficient remaining disk space (84805681152 B)
[2025-11-23 06:28:49] 2025-11-23 06:27:58,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 06:28:49] 2025-11-23 06:27:58,689 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 06:28:49] 2025-11-23 06:27:58,689 | INFO     | update_server=False
[2025-11-23 06:28:49] 2025-11-23 06:27:58,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 06:28:49] 2025-11-23 06:27:58,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 06:28:49] 2025-11-23 06:27:58,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 06:28:49] 2025-11-23 06:27:58,690 | INFO     | aborting loop
[2025-11-23 06:28:49] 2025-11-23 06:27:59,654 | INFO     | all data control threads have been joined
[2025-11-23 06:28:49] 2025-11-23 06:27:59,695 | INFO     | [job] retrieve thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:27:59,696 | INFO     | [job] job monitor thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:00,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 06:28:49] 2025-11-23 06:28:00,078 | INFO     | all payload control threads have been joined
[2025-11-23 06:28:49] 2025-11-23 06:28:00,283 | INFO     | all job control threads have been joined
[2025-11-23 06:28:49] 2025-11-23 06:28:00,387 | INFO     | [payload] validate_post thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:00,401 | INFO     | [job] validate thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:00,429 | INFO     | [data] copytool_in thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:00,649 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:00,660 | INFO     | [data] control thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:00,695 | INFO     | [data] copytool_out thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:00,744 | INFO     | [payload] failed_post thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:00,927 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:01,083 | INFO     | [payload] control thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:01,122 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:01,132 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:01,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 06:28:49] 2025-11-23 06:28:01,288 | INFO     | [job] control thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:02,261 | INFO     | [job] queue monitor thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:04,028 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 06:28:49] 2025-11-23 06:28:29,476 | INFO     | PID=60795 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 06:28:49] 2025-11-23 06:28:29,476 | INFO     | .. there are 17 such processes running
[2025-11-23 06:28:49] 2025-11-23 06:28:29,478 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 06:28:49] 2025-11-23 06:28:29,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 06:28:49] 2025-11-23 06:28:29,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 06:28:49] 2025-11-23 06:28:43,888 | INFO     | [monitor] cgroup control has ended
[2025-11-23 06:28:49] 2025-11-23 06:28:44,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135047163983680)>', '<ExcThread(monitor, started 135046086244096)>']
[2025-11-23 06:28:49] 2025-11-23 06:28:44,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 06:28:49] 2025-11-23 06:28:44,535 | INFO     | [monitor] control thread has ended
[2025-11-23 06:28:49] 2025-11-23 06:28:49,192 | INFO     | all workflow threads have been joined
[2025-11-23 06:28:49] 2025-11-23 06:28:49,192 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 06:28:49] 2025-11-23 06:28:49,193 | INFO     | traces error code: 0
[2025-11-23 06:28:49] 2025-11-23 06:28:49,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 06:28:49] 2025-11-23 06:28:49,332 [wrapper] ==== pilot stdout END ====
[2025-11-23 06:28:49] 2025-11-23 06:28:49,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 06:28:49] 2025-11-23 06:28:49,339 [wrapper] pilotpid: 60795
[2025-11-23 06:28:49] 2025-11-23 06:28:49,345 [wrapper] Pilot exit status: 0
[2025-11-23 06:28:49] 2025-11-23 06:28:49,361 [wrapper] pandaids: 6892527333
[2025-11-23 06:28:49] 2025-11-23 06:28:49,459 [wrapper] cleanup supervisor_pilot 2770517 60801
[2025-11-23 06:28:49] 2025-11-23 06:28:49,462 [wrapper] Test setup, not cleaning
[2025-11-23 06:28:49] 2025-11-23 06:28:49,465 [wrapper] apfmon messages muted
[2025-11-23 06:28:49] 2025-11-23 06:28:49,469 [wrapper] ==== wrapper stdout END ====
[2025-11-23 06:28:49] 2025-11-23 06:28:49,472 [wrapper] ==== wrapper stderr END ====
[2025-11-23 06:28:49]  *** Error codes and diagnostics ***
[2025-11-23 06:28:49]     "exeErrorCode": 0,
[2025-11-23 06:28:49]     "exeErrorDiag": "",
[2025-11-23 06:28:49]     "pilotErrorCode": 0,
[2025-11-23 06:28:49]     "pilotErrorDiag": "",
[2025-11-23 06:28:49]  *** Listing of results directory ***
[2025-11-23 06:28:49] total 1318840
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc    576529 Nov 19 07:00 pilot3.tar.gz
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc      5112 Nov 19 07:07 queuedata.json
[2025-11-23 06:28:49] -rwx------ 1 boinc boinc     36292 Nov 19 07:07 runpilot2-wrapper.sh
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc       100 Nov 22 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 06:28:49] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 01:53 run_atlas
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc       105 Nov 22 01:53 job.xml
[2025-11-23 06:28:49] -rw-r--r-- 2 boinc boinc 409681387 Nov 22 01:53 EVNT.47493027._000126.pool.root.1
[2025-11-23 06:28:49] -rw-r--r-- 2 boinc boinc    590095 Nov 22 01:53 input.tar.gz
[2025-11-23 06:28:49] drwxrwx--x 2 boinc boinc      4096 Nov 22 01:53 shared
[2025-11-23 06:28:49] -rw-r--r-- 2 boinc boinc     15120 Nov 22 01:53 start_atlas.sh
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc         0 Nov 22 01:53 boinc_setup_complete
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc      6530 Nov 22 01:53 init_data.xml
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc         0 Nov 22 01:53 boinc_lockfile
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc      2773 Nov 22 01:53 pandaJob.out
[2025-11-23 06:28:49] -rw------- 1 boinc boinc    989798 Nov 22 01:53 agis_schedconf.cvmfs.json
[2025-11-23 06:28:49] drwx------ 5 boinc boinc      4096 Nov 22 01:53 pilot3
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc       534 Nov 23 06:20 boinc_task_state.xml
[2025-11-23 06:28:49] -rw------- 1 boinc boinc 904569992 Nov 23 06:27 HITS.47493029._001213.pool.root.1
[2025-11-23 06:28:49] -rw------- 1 boinc boinc      1044 Nov 23 06:27 memory_monitor_summary.json
[2025-11-23 06:28:49] -rw------- 1 boinc boinc   1526164 Nov 23 06:27 agis_ddmendpoints.agis.ALL.json
[2025-11-23 06:28:49] -rw------- 1 boinc boinc   2222136 Nov 23 06:27 log.47493029._001213.job.log.tgz.1
[2025-11-23 06:28:49] -rw------- 1 boinc boinc      8615 Nov 23 06:27 heartbeat.json
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc      8192 Nov 23 06:28 boinc_mmap_file
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc        30 Nov 23 06:28 wrapper_checkpoint.txt
[2025-11-23 06:28:49] -rw------- 1 boinc boinc        95 Nov 23 06:28 pilot_heartbeat.json
[2025-11-23 06:28:49] -rw------- 1 boinc boinc      4891 Nov 23 06:28 pilotlog.txt
[2025-11-23 06:28:49] -rw------- 1 boinc boinc  13934717 Nov 23 06:28 log.47493029._001213.job.log.1
[2025-11-23 06:28:49] -rw------- 1 boinc boinc       353 Nov 23 06:28 output.list
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc       620 Nov 23 06:28 runtime_log
[2025-11-23 06:28:49] -rw------- 1 boinc boinc  16179200 Nov 23 06:28 result.tar.gz
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc      8794 Nov 23 06:28 runtime_log.err
[2025-11-23 06:28:49] -rw------- 1 boinc boinc       665 Nov 23 06:28 fanKDmKTrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmggGKDmU6Zenn.diag
[2025-11-23 06:28:49] -rw-r--r-- 1 boinc boinc     20974 Nov 23 06:28 stderr.txt
[2025-11-23 06:28:49] HITS file was successfully produced:
[2025-11-23 06:28:49] -rw------- 1 boinc boinc 904569992 Nov 23 06:27 shared/HITS.pool.root.1
[2025-11-23 06:28:49]  *** Contents of shared directory: ***
[2025-11-23 06:28:49] total 1299856
[2025-11-23 06:28:49] -rw-r--r-- 2 boinc boinc 409681387 Nov 22 01:53 ATLAS.root_0
[2025-11-23 06:28:49] -rw-r--r-- 2 boinc boinc    590095 Nov 22 01:53 input.tar.gz
[2025-11-23 06:28:49] -rw-r--r-- 2 boinc boinc     15120 Nov 22 01:53 start_atlas.sh
[2025-11-23 06:28:49] -rw------- 1 boinc boinc 904569992 Nov 23 06:27 HITS.pool.root.1
[2025-11-23 06:28:49] -rw------- 1 boinc boinc  16179200 Nov 23 06:28 result.tar.gz
06:28:50 (4793): run_atlas exited; CPU time 402534.946269
06:28:50 (4793): called boinc_finish(0)

</stderr_txt>
]]>

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