Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:22:47 (26414): wrapper (7.7.26015): starting
05:22:47 (26414): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 05:22:47] Arguments: --nthreads 8
[2025-11-22 05:22:47] Threads: 8
[2025-11-22 05:22:47] Checking for CVMFS
[2025-11-22 05:22:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 05:22:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 05:22:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 05:22:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 05:22:50] 2.11.2.0 31392 278975 139352 153159 2 75 13095094 25165824 4249 130560 4 137940006 99.876 78206906 2987 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 05:22:50] CVMFS is ok
[2025-11-22 05:22:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 05:22:50] Checking for apptainer binary...
[2025-11-22 05:22:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 05:22:50] Running /usr/bin/apptainer --version
[2025-11-22 05:22:50] apptainer version 1.3.2-1.el7
[2025-11-22 05:22:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 05:22:53] cg-vwn267.simple-grid.lan
[2025-11-22 05:22:53] apptainer works
[2025-11-22 05:22:53] Set ATHENA_PROC_NUMBER=8
[2025-11-22 05:22:53] Set ATHENA_CORE_NUMBER=8
[2025-11-22 05:22:53] Starting ATLAS job with PandaID=6892522212
[2025-11-22 05:22:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 07:23:33]  *** The last 200 lines of the pilot log: ***
[2025-11-23 07:23:33] 2025-11-23 06:22:27,464 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:23:33] 2025-11-23 06:22:28,087 | INFO     | time since job start (93347s) is within the limit (172800.0s)
[2025-11-23 07:23:33] 2025-11-23 06:22:29,977 | INFO     | monitor loop #6265: job 0:6892522212 is in state 'finished'
[2025-11-23 07:23:33] 2025-11-23 06:22:29,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:23:33] 2025-11-23 06:22:30,093 | INFO     | time since job start (93349s) is within the limit (172800.0s)
[2025-11-23 07:23:33] 2025-11-23 06:22:31,382 | INFO     | PID=30227 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 07:23:33] 2025-11-23 06:22:31,382 | INFO     | .. there are 9 such processes running
[2025-11-23 07:23:33] 2025-11-23 06:22:32,383 | INFO     | time since job start (93351s) is within the limit (172800.0s)
[2025-11-23 07:23:33] 2025-11-23 06:22:32,491 | INFO     | monitor loop #6266: job 0:6892522212 is in state 'finished'
[2025-11-23 07:23:33] 2025-11-23 06:22:32,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:23:33] 2025-11-23 06:22:34,389 | INFO     | time since job start (93353s) is within the limit (172800.0s)
[2025-11-23 07:23:33] 2025-11-23 06:22:34,995 | INFO     | monitor loop #6267: job 0:6892522212 is in state 'finished'
[2025-11-23 07:23:33] 2025-11-23 06:22:34,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:23:33] 2025-11-23 06:22:36,397 | INFO     | time since job start (93355s) is within the limit (172800.0s)
[2025-11-23 07:23:33] 2025-11-23 06:22:37,197 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 07:23:33] 2025-11-23 06:22:37,198 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 07:23:33] 2025-11-23 06:22:37,200 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6892522212/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 07:23:33] 2025-11-23 06:22:37,201 | INFO     | extracted standard info from prmon json
[2025-11-23 07:23:33] 2025-11-23 06:22:37,201 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 07:23:33] 2025-11-23 06:22:37,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 07:23:33] 2025-11-23 06:22:37,231 | INFO     | fitting pss+swap vs Time
[2025-11-23 07:23:33] 2025-11-23 06:22:37,234 | INFO     | sum of square deviations: 1091105467068.857
[2025-11-23 07:23:33] 2025-11-23 06:22:37,353 | INFO     | sum of deviations: 3381377992014.9224
[2025-11-23 07:23:33] 2025-11-23 06:22:37,354 | INFO     | mean x: 1763832466.3609467
[2025-11-23 07:23:33] 2025-11-23 06:22:37,354 | INFO     | mean y: 2848310.049309665
[2025-11-23 07:23:33] 2025-11-23 06:22:37,354 | INFO     | intersect: -5463336640.317107
[2025-11-23 07:23:33] 2025-11-23 06:22:37,356 | INFO     | chi2: 22.518808365512022
[2025-11-23 07:23:33] 2025-11-23 06:22:37,358 | INFO     | sum of square deviations: 1080381041504.5475
[2025-11-23 07:23:33] 2025-11-23 06:22:37,517 | INFO     | monitor loop #6268: job 0:6892522212 is in state 'finished'
[2025-11-23 07:23:33] 2025-11-23 06:22:37,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:23:33] 2025-11-23 06:22:37,526 | INFO     | sum of deviations: 3872680789721.1143
[2025-11-23 07:23:33] 2025-11-23 06:22:37,526 | INFO     | mean x: 1763832313.8654354
[2025-11-23 07:23:33] 2025-11-23 06:22:37,526 | INFO     | mean y: 2855295.0593667547
[2025-11-23 07:23:33] 2025-11-23 06:22:37,526 | INFO     | intersect: -6319691339.675581
[2025-11-23 07:23:33] 2025-11-23 06:22:37,528 | INFO     | chi2: 19.431966542636562
[2025-11-23 07:23:33] 2025-11-23 06:22:37,529 | INFO     | current chi2=19.431966542636562 (change=13.70783823358529 %)
[2025-11-23 07:23:33] 2025-11-23 06:22:37,529 | INFO     | right removable region: 1515
[2025-11-23 07:23:33] 2025-11-23 06:22:37,531 | INFO     | sum of square deviations: 1080379778804.5493
[2025-11-23 07:23:33] 2025-11-23 06:22:37,624 | INFO     | sum of deviations: 2756652781947.6685
[2025-11-23 07:23:33] 2025-11-23 06:22:37,624 | INFO     | mean x: 1763832618.8654354
[2025-11-23 07:23:33] 2025-11-23 06:22:37,625 | INFO     | mean y: 2857191.9689973616
[2025-11-23 07:23:33] 2025-11-23 06:22:37,625 | INFO     | intersect: -4497665856.570099
[2025-11-23 07:23:33] 2025-11-23 06:22:37,626 | INFO     | chi2: 18.087749967785665
[2025-11-23 07:23:33] 2025-11-23 06:22:37,627 | INFO     | current chi2=18.087749967785665 (change=19.677144215644226 %)
[2025-11-23 07:23:33] 2025-11-23 06:22:37,627 | INFO     | left removable region: 10
[2025-11-23 07:23:33] 2025-11-23 06:22:37,629 | INFO     | sum of square deviations: 1057032657998.8907
[2025-11-23 07:23:33] 2025-11-23 06:22:37,726 | INFO     | sum of deviations: 2840277889905.7134
[2025-11-23 07:23:33] 2025-11-23 06:22:37,727 | INFO     | mean x: 1763832588.3754153
[2025-11-23 07:23:33] 2025-11-23 06:22:37,727 | INFO     | mean y: 2873278.062458472
[2025-11-23 07:23:33] 2025-11-23 06:22:37,727 | INFO     | intersect: -4736596845.540019
[2025-11-23 07:23:33] 2025-11-23 06:22:37,729 | INFO     | chi2: 11.271503089923419
[2025-11-23 07:23:33] 2025-11-23 06:22:37,729 | INFO     | current memory leak: 2.69 B/s (using 1505 data points, chi2=11.27)
[2025-11-23 07:23:33] 2025-11-23 06:22:37,732 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-23 07:23:33] 2025-11-23 06:22:37,732 | INFO     | ..............................
[2025-11-23 07:23:33] 2025-11-23 06:22:37,732 | INFO     | . Timing measurements:
[2025-11-23 07:23:33] 2025-11-23 06:22:37,732 | INFO     | . get job = 0 s
[2025-11-23 07:23:33] 2025-11-23 06:22:37,732 | INFO     | . initial setup = 6 s
[2025-11-23 07:23:33] 2025-11-23 06:22:37,732 | INFO     | . payload setup = 161 s
[2025-11-23 07:23:33] 2025-11-23 06:22:37,732 | INFO     | . stage-in = 0 s
[2025-11-23 07:23:33] 2025-11-23 06:22:37,732 | INFO     | . payload execution = 92904 s
[2025-11-23 07:23:33] 2025-11-23 06:22:37,733 | INFO     | . stage-out = 5 s
[2025-11-23 07:23:33] 2025-11-23 06:22:37,733 | INFO     | . log creation = 1 s
[2025-11-23 07:23:33] 2025-11-23 06:22:37,733 | INFO     | ..............................
[2025-11-23 07:23:33] 2025-11-23 06:22:37,851 | INFO     | 
[2025-11-23 07:23:33] 2025-11-23 06:22:37,851 | INFO     | job summary report
[2025-11-23 07:23:33] 2025-11-23 06:22:37,851 | INFO     | --------------------------------------------------
[2025-11-23 07:23:33] 2025-11-23 06:22:37,851 | INFO     | PanDA job id: 6892522212
[2025-11-23 07:23:33] 2025-11-23 06:22:37,851 | INFO     | task id: 47493029
[2025-11-23 07:23:33] 2025-11-23 06:22:37,851 | INFO     | errors: (none)
[2025-11-23 07:23:33] 2025-11-23 06:22:37,851 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 07:23:33] 2025-11-23 06:22:37,852 | INFO     | pilot state: finished 
[2025-11-23 07:23:33] 2025-11-23 06:22:37,852 | INFO     | transexitcode: 0
[2025-11-23 07:23:33] 2025-11-23 06:22:37,852 | INFO     | exeerrorcode: 0
[2025-11-23 07:23:33] 2025-11-23 06:22:37,852 | INFO     | exeerrordiag: 
[2025-11-23 07:23:33] 2025-11-23 06:22:37,852 | INFO     | exitcode: 0
[2025-11-23 07:23:33] 2025-11-23 06:22:37,852 | INFO     | exitmsg: OK
[2025-11-23 07:23:33] 2025-11-23 06:22:37,852 | INFO     | cpuconsumptiontime: 342405 s
[2025-11-23 07:23:33] 2025-11-23 06:22:37,852 | INFO     | nevents: 1000
[2025-11-23 07:23:33] 2025-11-23 06:22:37,852 | INFO     | neventsw: 0
[2025-11-23 07:23:33] 2025-11-23 06:22:37,852 | INFO     | pid: 4421
[2025-11-23 07:23:33] 2025-11-23 06:22:37,852 | INFO     | pgrp: 4421
[2025-11-23 07:23:33] 2025-11-23 06:22:37,852 | INFO     | corecount: 8
[2025-11-23 07:23:33] 2025-11-23 06:22:37,853 | INFO     | event service: False
[2025-11-23 07:23:33] 2025-11-23 06:22:37,853 | INFO     | sizes: {0: 2298615, 1: 2298814, 12: 2298814, 22: 2298842, 33: 2298870, 44: 2298926, 55: 2299082, 66: 2299110, 76: 2299138, 87: 2299194, 92: 2299484, 98: 2299792, 9
[2025-11-23 07:23:33] 2025-11-23 06:22:37,853 | INFO     | --------------------------------------------------
[2025-11-23 07:23:33] 2025-11-23 06:22:37,853 | INFO     | 
[2025-11-23 07:23:33] 2025-11-23 06:22:37,853 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-23 07:23:33] 2025-11-23 06:22:38,347 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,347 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,347 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,347 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,347 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,348 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,348 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,348 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,348 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,348 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,348 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,349 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 07:23:33] 2025-11-23 06:22:38,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,349 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 07:23:33] 2025-11-23 06:22:38,349 | INFO     | job 6892522212 has completed (purged errors)
[2025-11-23 07:23:33] 2025-11-23 06:22:38,349 | INFO     | overall cleanup function is called
[2025-11-23 07:23:33] 2025-11-23 06:22:39,381 | INFO     | --- collectZombieJob: --- 10, [4421]
[2025-11-23 07:23:33] 2025-11-23 06:22:39,381 | INFO     | zombie collector waiting for pid 4421
[2025-11-23 07:23:33] 2025-11-23 06:22:39,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 07:23:33] 2025-11-23 06:22:39,382 | INFO     | collected zombie processes
[2025-11-23 07:23:33] 2025-11-23 06:22:39,382 | INFO     | will attempt to kill all subprocesses of pid=4421
[2025-11-23 07:23:33] 2025-11-23 06:22:39,513 | INFO     | process IDs to be killed: [4421] (in reverse order)
[2025-11-23 07:23:33] 2025-11-23 06:22:39,730 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 07:23:33] 2025-11-23 06:22:39,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 07:23:33] 2025-11-23 06:22:39,734 | INFO     | did not find any defunct processes belonging to 4421
[2025-11-23 07:23:33] 2025-11-23 06:22:39,742 | INFO     | did not find any defunct processes belonging to 4421
[2025-11-23 07:23:33] 2025-11-23 06:22:39,772 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 07:23:33] 2025-11-23 06:22:39,773 | INFO     | ready for new job
[2025-11-23 07:23:33] 2025-11-23 06:22:39,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 07:23:33] 2025-11-23 06:22:39,780 | INFO     | ***************************************
[2025-11-23 07:23:33] 2025-11-23 06:22:39,780 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 07:23:33] 2025-11-23 06:22:39,780 | INFO     | ***************************************
[2025-11-23 07:23:33] 2025-11-23 06:22:39,780 | INFO     | 
[2025-11-23 07:23:33] 2025-11-23 06:22:39,781 | INFO     | pilot is running in a VM
[2025-11-23 07:23:33] 2025-11-23 06:22:39,781 | INFO     | architecture information:
[2025-11-23 07:23:33] 2025-11-23 06:22:39,784 | INFO     | executing command: cat /etc/os-release
[2025-11-23 07:23:33] 2025-11-23 06:22:39,941 | INFO     | cat /etc/os-release:
[2025-11-23 07:23:33] NAME="CentOS Linux"
[2025-11-23 07:23:33] VERSION="7 (Core)"
[2025-11-23 07:23:33] ID="centos"
[2025-11-23 07:23:33] ID_LIKE="rhel fedora"
[2025-11-23 07:23:33] VERSION_ID="7"
[2025-11-23 07:23:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 07:23:33] ANSI_COLOR="0;31"
[2025-11-23 07:23:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 07:23:33] HOME_URL="https://www.centos.org/"
[2025-11-23 07:23:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 07:23:33] 
[2025-11-23 07:23:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 07:23:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 07:23:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 07:23:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 07:23:33] 
[2025-11-23 07:23:33] 2025-11-23 06:22:39,941 | INFO     | ***************************************
[2025-11-23 07:23:33] 2025-11-23 06:22:40,445 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-23 07:23:33] 2025-11-23 06:22:40,571 | INFO     | sufficient remaining disk space (495202598912 B)
[2025-11-23 07:23:33] 2025-11-23 06:22:40,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 07:23:33] 2025-11-23 06:22:40,572 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 07:23:33] 2025-11-23 06:22:40,572 | INFO     | update_server=False
[2025-11-23 07:23:33] 2025-11-23 06:22:40,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 07:23:33] 2025-11-23 06:22:40,572 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 07:23:33] 2025-11-23 06:22:40,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 07:23:33] 2025-11-23 06:22:40,644 | INFO     | all payload control threads have been joined
[2025-11-23 07:23:33] 2025-11-23 06:22:40,991 | INFO     | all data control threads have been joined
[2025-11-23 07:23:33] 2025-11-23 06:22:41,034 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:23:33] 2025-11-23 06:22:41,034 | INFO     | aborting loop
[2025-11-23 07:23:33] 2025-11-23 06:22:41,577 | INFO     | [job] retrieve thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:41,587 | INFO     | [job] validate thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:41,602 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:41,632 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:41,650 | INFO     | [payload] control thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:41,663 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:41,857 | INFO     | all job control threads have been joined
[2025-11-23 07:23:33] 2025-11-23 06:22:41,997 | INFO     | [data] control thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:42,040 | INFO     | [job] job monitor thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:42,161 | INFO     | [payload] failed_post thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:42,289 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:42,398 | INFO     | [data] copytool_in thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:42,528 | INFO     | [payload] validate_post thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:42,583 | INFO     | [data] copytool_out thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:42,863 | INFO     | [job] control thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:42,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:23:33] 2025-11-23 06:22:43,873 | INFO     | [job] queue monitor thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:22:44,582 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 07:23:33] 2025-11-23 06:23:09,594 | INFO     | PID=30227 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 07:23:33] 2025-11-23 06:23:09,595 | INFO     | .. there are 9 such processes running
[2025-11-23 07:23:33] 2025-11-23 06:23:09,597 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 07:23:33] 2025-11-23 06:23:09,597 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 07:23:33] 2025-11-23 06:23:09,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 07:23:33] 2025-11-23 06:23:23,517 | INFO     | [monitor] cgroup control has ended
[2025-11-23 07:23:33] 2025-11-23 06:23:25,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976513214272)>', '<ExcThread(monitor, started 139975769175808)>']
[2025-11-23 07:23:33] 2025-11-23 06:23:25,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 07:23:33] 2025-11-23 06:23:25,695 | INFO     | [monitor] control thread has ended
[2025-11-23 07:23:33] 2025-11-23 06:23:30,262 | INFO     | all workflow threads have been joined
[2025-11-23 07:23:33] 2025-11-23 06:23:30,262 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 07:23:33] 2025-11-23 06:23:30,262 | INFO     | traces error code: 0
[2025-11-23 07:23:33] 2025-11-23 06:23:30,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 07:23:33] 2025-11-23 06:23:30,530 [wrapper] ==== pilot stdout END ====
[2025-11-23 07:23:33] 2025-11-23 06:23:30,536 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 07:23:33] 2025-11-23 06:23:30,547 [wrapper] pilotpid: 30227
[2025-11-23 07:23:33] 2025-11-23 06:23:30,554 [wrapper] Pilot exit status: 0
[2025-11-23 07:23:33] 2025-11-23 06:23:30,579 [wrapper] pandaids: 6892522212
[2025-11-23 07:23:33] 2025-11-23 06:23:30,621 [wrapper] cleanup supervisor_pilot  1928 30228
[2025-11-23 07:23:33] 2025-11-23 06:23:30,666 [wrapper] Test setup, not cleaning
[2025-11-23 07:23:33] 2025-11-23 06:23:30,780 [wrapper] apfmon messages muted
[2025-11-23 07:23:33] 2025-11-23 06:23:30,899 [wrapper] ==== wrapper stdout END ====
[2025-11-23 07:23:33] 2025-11-23 06:23:30,991 [wrapper] ==== wrapper stderr END ====
[2025-11-23 07:23:33]  *** Error codes and diagnostics ***
[2025-11-23 07:23:33]     "exeErrorCode": 0,
[2025-11-23 07:23:33]     "exeErrorDiag": "",
[2025-11-23 07:23:33]     "pilotErrorCode": 0,
[2025-11-23 07:23:33]     "pilotErrorDiag": "",
[2025-11-23 07:23:33]  *** Listing of results directory ***
[2025-11-23 07:23:33] total 1335320
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc      5112 Nov 19 08:00 queuedata.json
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-11-23 07:23:33] -rwx------. 1 boinc boinc     36292 Nov 19 08:01 runpilot2-wrapper.sh
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc       100 Nov 22 05:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 07:23:33] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 05:22 run_atlas
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc       105 Nov 22 05:22 job.xml
[2025-11-23 07:23:33] -rw-r--r--. 2 boinc boinc 411445220 Nov 22 05:22 EVNT.47493027._000030.pool.root.1
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc      6391 Nov 22 05:22 init_data.xml
[2025-11-23 07:23:33] -rw-r--r--. 2 boinc boinc     15120 Nov 22 05:22 start_atlas.sh
[2025-11-23 07:23:33] drwxrwx--x. 2 boinc boinc        68 Nov 22 05:22 shared
[2025-11-23 07:23:33] -rw-r--r--. 2 boinc boinc    590094 Nov 22 05:22 input.tar.gz
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc         0 Nov 22 05:22 boinc_lockfile
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc      2768 Nov 22 05:22 pandaJob.out
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc    989752 Nov 22 05:26 agis_schedconf.cvmfs.json
[2025-11-23 07:23:33] drwx------. 5 boinc boinc      4096 Nov 22 05:26 pilot3
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc       533 Nov 23 06:57 boinc_task_state.xml
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc 922057270 Nov 23 07:19 HITS.47493029._000241.pool.root.1
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc      1032 Nov 23 07:20 memory_monitor_summary.json
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc   1526164 Nov 23 07:20 agis_ddmendpoints.agis.ALL.json
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc   2582545 Nov 23 07:21 log.47493029._000241.job.log.tgz.1
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc      7956 Nov 23 07:22 heartbeat.json
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc        95 Nov 23 07:23 pilot_heartbeat.json
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc      8192 Nov 23 07:23 boinc_mmap_file
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc        29 Nov 23 07:23 wrapper_checkpoint.txt
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc      4884 Nov 23 07:23 pilotlog.txt
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc  12397922 Nov 23 07:23 log.47493029._000241.job.log.1
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc       353 Nov 23 07:23 output.list
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc       620 Nov 23 07:23 runtime_log
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc  15001600 Nov 23 07:23 result.tar.gz
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc       662 Nov 23 07:23 u0FKDmNNrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVYGKDm5uuZJm.diag
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc      8703 Nov 23 07:23 runtime_log.err
[2025-11-23 07:23:33] -rw-r--r--. 1 boinc boinc     21521 Nov 23 07:23 stderr.txt
[2025-11-23 07:23:33] HITS file was successfully produced:
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc 922057270 Nov 23 07:19 shared/HITS.pool.root.1
[2025-11-23 07:23:33]  *** Contents of shared directory: ***
[2025-11-23 07:23:33] total 1317500
[2025-11-23 07:23:33] -rw-r--r--. 2 boinc boinc 411445220 Nov 22 05:22 ATLAS.root_0
[2025-11-23 07:23:33] -rw-r--r--. 2 boinc boinc     15120 Nov 22 05:22 start_atlas.sh
[2025-11-23 07:23:33] -rw-r--r--. 2 boinc boinc    590094 Nov 22 05:22 input.tar.gz
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc 922057270 Nov 23 07:19 HITS.pool.root.1
[2025-11-23 07:23:33] -rw-------. 1 boinc boinc  15001600 Nov 23 07:23 result.tar.gz
07:23:35 (26414): run_atlas exited; CPU time 342940.150325
07:23:35 (26414): called boinc_finish(0)

</stderr_txt>
]]>

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